[go: up one dir, main page]

Menu

Commit [r19994]  Maximize  Restore  History

Jmol.___JmolVersion="14.3.7_2014.09.13"

bug fix: load *xxxx/val validation loading not working (14.3.7_2014.09.07)

new feature: load *xxxx/rna3d
-- preliminary only (assumes _atom_site.label_seq_id same as _atom_site.auth_seq_id
and mmCIF only -- thus PDBe, not RCSB for now, at least)
-- fetches http://rna.bgsu.edu/rna3dhub/loops/download/xxxx
-- hairpinLoops, internalLoops, junctions
-- allows for such constructs as:
select within(rna3d,"hairpinLoops")
select within(rna3d,"hairpinLoops where index=5")
x = getproperty("auxiliaryInfo.models[1].rna3d.internalLoops.5")
print x
{
_atoms : ({3023:3062 3639:3706})
_isres : true
_path : "internalLoops"
index : 5
units : "1S72|1|0|C|153,1S72|1|0|C|154,1S72|1|0|G|182,1S72|1|0|A|183,1S72|1|0|G|184"
}
y = x._atoms
select y

hansonr 2014-09-13

changed /trunk/Jmol/src/org/jmol/viewer/Jmol.properties