WO1996033214A2 - Altered protein expression in hypoxic trophoblasts - Google Patents
Altered protein expression in hypoxic trophoblasts Download PDFInfo
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- WO1996033214A2 WO1996033214A2 PCT/US1996/005441 US9605441W WO9633214A2 WO 1996033214 A2 WO1996033214 A2 WO 1996033214A2 US 9605441 W US9605441 W US 9605441W WO 9633214 A2 WO9633214 A2 WO 9633214A2
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- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
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- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
- C07K14/47—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
- C07K14/4701—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals not used
- C07K14/4715—Pregnancy proteins, e.g. placenta proteins, alpha-feto-protein, pregnancy specific beta glycoprotein
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- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/689—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids related to pregnancy or the gonads
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- G01N2800/00—Detection or diagnosis of diseases
- G01N2800/36—Gynecology or obstetrics
Definitions
- the present invention relates to the field of reproductive biology. More particularly, the present invention relates to particular proteins whose expression is differentially regulated in hypoxic trophoblasts.
- Implantation and placental development involve a complex series of physiological events that result in the physical connection between the mammalian embryo and its mother. Failures in implantation and placental development are clinically important. About one-third of normal human pregnancies end in spontaneous abortion, with 22% of such abortions occurring before pregnancy is even detected clinically (Wilcox et al. N. Engl. J. Med.. 319: 189 (1988)). The actual abortion rate may be even higher as failures in development during the peri-implantation period account for almost 80% of embryonic loss that occurs in farm animal and, by implication, other species (Roberts, et al. Oxf. Rev. Reprod. Biol. , 12: 147 (1990),
- Preeclampsia is an idiopathic, life-threatening disease of late pregnancy in which hypertension is associated with hepatic, neurologic, hematologic, or renal involvement. Rapid development of edema, particularly of the ankles, face and hands, along with a rise in blood pressure, usually signals the onset of this condition. Jaundice and abnormal liver function may be present.
- Preeclampsia occurs in 7-10% of pregnancies and is responsible for significant maternal and fetal morbidity (Roberts, Pregnancy-related hypertension., pages 703-752 In Maternal-Fetal Medicine- Principles and Practice, Creasy & Resnick, eds., W.B. Saunders, Philadelphia (1984).
- preeclampsia Once preeclampsia is diagnosed, hospitalization is indicated, since, as described above, the disease can rapidly progress to eclampsia, characterized by convulsions resulting in significant maternal and fetal trauma.
- the definitive treatment of preeclampsia and eclampsia is delivery of the conceptus, which is carried out promptly, if fetal size and maturity are adequate. If the fetus is immature, management consists of bed rest in a quiet environment and control of neurologic manifestations and blood pressure, the former with magnesium sulfate and the latter usually with vasodilators such as hydralazine and methyldopa.
- the present invention provides an in vitro culture system that effectively models abnormal placental function characteristic of an abnormal maternal-placental interface. It was a discovery of the present invention that trophoblast cells cultured under hypoxic conditions attain a morphology, antigenic phenotype, and activity that appears identical to that observed in trophoblasts of an abnormal maternal-placental interface characteristic of various diseases of pregnancy such as threatened abortion, high intrauterine growth retardation, gestational trophoblast diseases including molar pregnancy, choriocarcinoma, placental site tumors, ectopic pregnancy, proteinuria, pregnancy induced hypertension and preeclampsia.
- diseases of pregnancy such as threatened abortion, high intrauterine growth retardation, gestational trophoblast diseases including molar pregnancy, choriocarcinoma, placental site tumors, ectopic pregnancy, proteinuria, pregnancy induced hypertension and preeclampsia.
- the cells show a decrease in expression levels of ⁇ l/ ⁇ l integrins, the 92 kDa type IV collagenase and HLA-G whose upregulation is characteristic of normal trophoblasts, in vivo, and trophoblasts cultured identically under normal oxygen conditions.
- trophoblasts and explanted chorionic villi cultured under hypoxic conditions alter the expression levels of other, previously unidentified, proteins.
- proteins have been isolated and characterized, in terms of molecular weight, pi and whether they are upregulated or down regulated under hypoxic conditions as compared to trophoblasts cultured identically under normal conditions (see Tables 1 and 2).
- a number of these proteins have been sequenced and identified in searches of a protein sequence database.
- this invention provides for proteins expressed by a mammalian, more preferably a primate or a human, fetal trophoblast cell, or chorionic villus, whose level of expression is substantially altered when the cell, or chorionic villus, is grown under hypoxic conditions.
- Preferred hypoxic conditions when referring to in vitro culture conditions refer to culture under an atmosphere comprising less than about 20% oxygen, more preferably less than about 10% oxygen and most preferably less than about 2% oxygen. Hypoxic conditions may include full anoxia (0% oxygen).
- Preferred hypoxic conditions also include conditions in which the expression levels of ⁇ l/ ⁇ l, the 92 kDa type IV collagenase and HLA-G whose, as well as cell invasiveness, are significantly decreased as compared to trophoblasts cultured identically under normal conditions.
- Particularly preferred proteins include one or more of the proteins described in Table 1 and Table 2 as having increased or decreased release under hypoxic conditions.
- This invention additionally provides for methods of culturing trophoblasts and/or chorionic villi under hypoxic conditions as described above, and below in the specification.
- the method may further comprise measuring the expression of a protein selected from the proteins listed in Table 1 and Table 2 as having increased or decreased release under hypoxic conditions.
- the proteins expressed by the hypoxic trophoblasts or the hypoxic chorionic villi of the present invention can be used as markers indicative of the presence of hypoxic conditions which in turn, are indicative of an abnormal maternal-placental interface and consequent abnormal placental function.
- this invention provides for a method of detecting hypoxic trophoblast cells, or hypoxic chorionic villi, comprising measuring the expression level of a protein whose expression is altered in hypoxic trophoblasts as compared to normal (normoxic) trophoblasts or whose expression is altered in hypoxic chorionic villi as compared to normal (normoxic) chorionic villi.
- the protein is one or more proteins selected from the proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions.
- Most preferred proteins include human apolipoprotein A-l (apo A-l), placental lactogen, chorionic gonadotropin, and fibrinogen.
- Preferred detection methods include direct detection of the protein, or alternatively, detection of mRNA encoding the protein.
- Particularly preferred protein detection methods include immunoassays, while preferred mRNA detection methods include quantitative amplification techniques (e.g. quantitative PCR), or hybridization methods such as Northern blots.
- the present invention also provides a similar assay for detecting abnormal placental function.
- Particularly preferred proteins are one or more proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions.
- the hypoxic trophoblast, abnormal placental function, or abnormal maternal-placental interface are indicative or symptomatic of one or more diseases of pregnancy.
- Such diseases include, but are not limited to threatened abortion, high intrauterine growth retardation, gestational trophoblast diseases including molar pregnancy, choriocarcinoma, placental site tumors, ectopic pregnancy, proteinuria, pregnancy induced hypertension and preeclampsia.
- the present invention also provides methods of screening for agents that mitigate the effects of an abnormal maternal-placental interface. These methods involve culturing trophoblasts or chorionic villi under hypoxic conditions (as described above) in the presence of the agent and assaying for changes in the phenotype of the hypoxic trophoblasts, or hypoxic villi, relative to hypoxic trophoblasts or hypoxic chorionic villi cultured without the presence of the agent.
- the step of assaying for changes in the phenotype may comprise measuring the invasiveness of the trophoblast.
- the assay may comprise measuring the changes in the levels of expression of one or more proteins expressed (released) by the trophoblasts. Proteins whose expression (release) is typically altered in hypoxic trophoblasts are preferably assayed, while the proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions, are most preferably assayed.
- this invention also provides for methods of screening for agents that might induce the formation of an abnormal maternal-placental interface, or abnormal placental function.
- the trophoblasts, or chorionic villi are cultured under normal conditions and assayed for changes in phenotype as compared to normal and/or hypoxic trophoblasts. Phenotypic changes similar to hypoxic trophoblasts or hypoxic chorionic villi are indicative of possible interference or alteration of the maternal-placental interface by the agent.
- the assay may comprise measuring the changes in the levels of expression of one or more proteins expressed by the trophoblasts or chorionic villi.
- Proteins whose expression is typically altered in hypoxic trophoblasts are preferably assayed, while the proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions are most preferably assayed.
- This invention additionally provides a method of modeling, in vitro, an abnormal maternal-placental interface or abnormal placental function. The method comprises culturing trophoblast cells in a hypoxic environment as described above.
- this invention provides methods for identifying proteins that are indicative of metastasis and methods for detecting metastatic cells.
- Methods for identifying proteins indicative of metastasis involve culturing trophoblasts or chorionic villi under hypoxic conditions, as described above; detecting proteins that demonstrate an altered expression level as a result of the hypoxic conditions; and determining if these or related proteins are present in metastatic cells.
- Preferred proteins are one or more of the proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions.
- Preferred methods of determining if the proteins are present involve using antibodies specific for a protein whose expression is altered in hypoxic trophoblasts, more preferably an antibody specific for one of the proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions.
- Methods for detecting metastatic cells involve analyzing a biological sample from a mammal, more preferably a primate or human, for abnormal expression of one or more proteins indicative of metastasis. These preferably include proteins whose expression is altered in a hypoxic trophoblast or hypoxic chorionic villus, or closely related proteins.
- Particularly preferred proteins are one or more proteins listed in Tables 1 and 2 as having increased or decreased release under hypoxic conditions.
- invasiveness refers to the ability of a cell to penetrate an extracellular matrix. Methods of measuring invasiveness are well known to those of skill in the art (see, e.g. , Librach et al J. Cell Biol , 113: 437-449 (1991))
- an invasive cell type or an "invasive cell” refer to a cell capable of penetrating a tissue other than the tissue from which the cell originates.
- Invasive cells include, but are not limited to trophoblast and malignant cancer cells.
- proteins when used herein refers to a chain of amino acids whose ⁇ carbons are linked through peptide bonds. Proteins include native proteins in vivo or isolated native proteins. Proteins also include chemically or recombinantly synthesized proteins. In addition, it is to be understood that the term proteins, as used herein includes the protein product as translated from an mRNA molecule as well as the protein products as subsequently modified. Thus proteins also include modified proteins such as glycoproteins, lipopoproteins and the like.
- normal oxygen conditions refers to conditions under which a cells are exposed to the oxygen concentration that they experience in vivo in a normal healthy organism.
- nonormoxic cells refers to cells exposed to normal oxygen conditions.
- trophoblasts are cultured in vivo under normal atmospheric oxygen concentrations (about 20%, which, at a standard atmospheric pressure of 760 mm Hg, corresponds to a partial pressure of oxygen (pO 2 ) of about 152 mm Hg) the culture medium has an oxygen concentration of about 13% (pO 2 «98 mm Hg) which corresponds approximately to the oxygen concentration of arterial blood.
- pO 2 «98 mm Hg oxygen concentration of arterial blood.
- the term “normoxic” may be taken herein as refering to trophoblasts subject to an oxygen concentration comparable to trophoblasts cultured under an atmosphere containing a normal oxygen concentration (about 20% or about 152 mm Hg).
- an "immunoassay” is an assay that utilizes an antibody to specifically bind to the analyte.
- the immunoassay is characterized by the use of specific binding to a particular antibody as opposed to other physical or chemical properties to isolate, target, and quantify the analyte.
- expression or release of a protein when used herein in reference to a protein whose expression or release is altered under hypoxic conditions are used to indicate that alterations in detectable protein level are due to alterations in the physiological activity of the cell or tissue and not to attribute a particular mechanism to the observed alteration in detectable protein level.
- the phrases in "increase in expression” or “increase in release” of a protein are used to indicate that some action of the subject cell or tissue results in an increase in the detected levels of that protein, either released to the environment (e.g. , culture medium) or detected in a lysate.
- the increase can be due, for example, to increased expression of a gene encoding that protein, to defective expression of a native protein resulting in the detected protein "fragment”, changes in uptake of the protein, changes in active secretion of the protein or changes in net release of the protein.
- the phrase "specifically binds to a protein” or “specifically immunoreactive with”, when referring to an antibody refers to a binding reaction which is determinative of the presence of the protein in the presence of a heterogeneous population of proteins and other biologies.
- the specified antibodies bind to a particular protein and do not bind in a significant amount to other proteins present in the sample.
- Specific binding to a protein under such conditions may require an antibody that is selected for its specificity for a particular protein.
- antibodies can be raised to the trophoblast-secreted (trophoblast-released) proteins (TSPs) of the present invention and not to any other proteins present in a blood sample.
- TSPs trophoblast-secreted proteins
- a protein of spot n when referring to two dimensional electrophoresis gels describes a protein that occupies the same spatial position, in reference to other protein spots in an electrophoresis gel of the same type of cell or tissue preparation run under the same conditions as the referenced electrophoresis.
- the letter “n” refers to the spot number.
- a protein of spot 7 will appear in a two-dimensional electrophoresis gel in the same position, in relation to the other spots, as the spot identified as spot 7 in Figures 1 and 2.
- Figure 1 and Figure 2 show two-dimensional (PAGE) maps of unlabeled (Coomassie blue-stained) proteins released by chroionic villi grown in F12 HAM/DMEM (l: l/v:v) medium under standard (20% O 2 , Figure 1) and hypoxic (2% O 2 , Figure 2) conditions. Since the gels are 10% polyacrylamide, porteins in the lower molecular weight region of the gel are resolved best. As with cytotrophoblasts, the protein repertoire the cells release under both conditions is remarkably similar. Nevertheless, two types of changes were observed; abundance and pi. A small number of proteins were present in either greater or lesser amounts when the villi were maintained in 2% O 2 . Protein abundance changes are characterized by the following symbols: O down in hypoxia; D up in hypoxia; and ⁇ unchanged. Changes in apparent pi are attributed to changes in posttranslational modifications such as glycosylation and/or phosphorylation.
- This invention involves the discovery that trophoblasts and/or chorionic villi grown under hypoxic conditions provide a useful in vitro model of the abnormal maternal-placental interface and various disease states that are characteristic of, or result from, abnormal placental-maternal interaction or function.
- hypoxic trophoblasts express a gross morphology, a histology, an antigenic phenotype and a loss of invasiveness that is identical to that found in cells characteristic of the abnormal maternal-placental interface characteristic of a number of diseases of pregnancy.
- Such diseases include, but are not limited to, threatened abortion, high intrauterine growth retardation, gestational trophoblast diseases including molar pregnancy, choriocarcinoma, placental site tumors, ectopic pregnancy, proteinuria, pregnancy induced hypertension and preeclampsia.
- the in vitro models of the present invention thus provides an excellent system in which to screen for therapeutic agents useful in the treatment of various diseases of pregnancy involving an abnormal maternal-placental interface.
- the present invention provides for a number of proteins whose expression level is dramatically altered (either upregulated or downregulated) in hypoxic trophoblasts and hypoxic chorionic villi. These proteins provide useful markers for the early diagnosis of abnormal placental function and thus of diseases, such as preeclampsia, characteristic of abnormal placental function.
- these proteins are responsible for various complications of pregnancy including (1) an alteration in vascular reactivity associated with a hypersensitivity to infused angiotensin; (2) a decrease in production of prostacyclin with an associated increase in production of thromboxanes; (3) a decrease in renal hemodynamics, due at least in part to glomerular endotheliosis; (4) a widespread endothelial disorder, resulting in the loss of albumin from the intravascular space; and (5) an inherent immunologic misadaptation during placentation, resulting in incomplete trophoblast invasion of the spiral arterioles pathophysiological abnormalities. Detection of expression levels of these proteins provides a screening system for possible therapeutic agents that might mitigate these and other adverse effects of abnormal placental differentiation.
- the in vitro model of the present invention provides an excellent system for the identification of proteins that mediate cellular invasion of a tissue and for the screening of therapeutic agents that may inhibit the invasive activity of such cells.
- Trophoblasts are specialized epithelial cells of the placenta that physically connect the embryo and the uterus.
- trophoblasts are invasive, breaching uterine blood vessels and thereby achieving direct contact with maternal blood.
- human trophoblasts are extremely invasive; they traverse the uterine epithelium and invade the decidua, the inner third of the myometrium and the maternal arteries.
- trophoblasts includes the cytotrophoblast stem cells and lineages derived from these stem cells.
- the various lineages derived from cytototrophoblast stem cells are generally known to those of skill in the art. In humans, for example, two differentiation pathways exist for cytotrophoblasts, giving rise to populations that are morphologically and functionally distinct (Cross et al. Science, 266: 1508-1518 (1994). In the first trimester, cytotrophoblast stem cells reside in chorionic villi of two types; "floating" villi that do not contact the uterine wall and “anchoring" villi that do contact the uterine wall.
- Cytotrophoblasts in the floating villi exist only as polarized epithelial monolayers, anchored to a basement membranae and surrounding a stromal core containing fetal blood vessels. These cytotrophoblasts, which are highly proliferative in the first trimester of gestation, differentiate exclusively by fusing to form a syncytial layer that covers the villus. Floating villi, which make up the fetal compartment of the placenta, are bathed by maternal blood and perform gas and nutrient exchange functions.
- anchoring villi contain cytotrophoblast stem cells that enter both differentiation pathways. In much of the anchoring villus, cytotrophoblasts fuse to form a syncytium. However, at selected sites, cytotrophoblasts break through the syncytium and form multilayered columns of nonpolarized cells. Anchoring villi physically connect the embryo to the uterine wall via these cell columns, and give rise to the most highly invasive and migratory cytotrophoblasts. These invasive trophoblasts (also known as intermediate trophoblasts, cytotrophoblasts, or x-cells) invade uterine blood vessels.
- invasive trophoblasts also known as intermediate trophoblasts, cytotrophoblasts, or x-cells
- abnormal placental function refers to the physiological consequences of this abnormal placental development.
- hypoxia plays a role in this abnormal development process leading to superficial connection between the placenta and the uterus. Without being bound to a particular theory, it is believed that the lack of uterine blood vessel invasion by trophoblasts, which typically initiates maternal blood flow to the placenta in normal pregnancy, makes this tissue relatively hypoxic under preeclamptic conditions. The resulting hypoxia is associated with the differential regulation of a number of proteins that are released to the maternal circulation. It was a discovery of the present invention that cytotrophoblasts cultured under hypoxic conditions (as described in Examples 1 and 2) showed abnormal differentiation that was identical to that observed in preeclampsia in vivo.
- the cells expressed the same altered pattern of stage-specific antigens as that seen in vivo.
- the hypoxic cells expressed very low levels of al/ ⁇ l , the 92 kDa type IV collagenase and HLA-G whose upregulation is characteristic of normal cytotrophoblasts.
- the cells' invasiveness was greatly reduced. This is the exact same antigenic phenotype that characterizes cytotrophoblast differentiation in preeclampsia and indicates that these hypoxic trophoblast cultures can be used to identify unique proteins characteristic of an abnormal maternal-placental interface. Such proteins are candidates for the toxic placental factors that are thought to produce the maternal syndrome associated with preeclampsia and other diseases of pregnancy.
- chorionic villi e.g., anchoring chorionic villi
- hypoxic conditions also showed altered release of proteins that can be used as markers of an abnormal maternal-placental interface.
- proteins appear to be good markers of preeclampsia and other diseases of pregnancy.
- this invention provides for an in vitro model of abnormal maternal-placental interface or abnormal placental function.
- This model comprises culturing cytotrophoblasts and/or chorionic villi under hypoxic conditions.
- hypoxic conditions are culture conditions under which the trophoblasts or chorionic villi are exposed to oxygen concentrations less than those to which they are exposed in vivo in a normal healthy pregnancy.
- the culture medium contains about 13% oxygen (pO 2 *-98 mm Hg) which is comparable the physiological oxygen concentrations trophoblasts experience in vivo in a normal, healthy pregnancy.
- hypoxic conditions refers to culture conditions in which cells are grown under an atmosphere containing less than about 20% oxyten, more preferably less than about 10% oxygen and most preferably less than about 2% oxygen.
- hypoxic conditions include fully anoxic conditions.
- the trophoblasts may be isolated and cultured according to any of a number of means well known to those of skill in the art.
- the trophoblast cells are isolated and cultured according to the methods described by Fisher et al J. Cell. Biol , 109: 891-902 (1989) and Librach et al , J. Cell Biol , 113: 437-449 (1991) and detailed in Example 1.
- first and second trimester placentas are obtained immediately after vacuum aspiration, and the chorionic villi are prepared as described by Fisher et al J. Cell. Biochem. , 27: 31-41 (1985).
- cytotrophoblast cells from villi are isolated as described in Fisher et al , Troph. Res. , 4: 115-138 (1990). Briefly, the washed villus pellet is incubated for either 20 (first trimester) or 30 min (second trimester) (5: 1 vol/wt/wt) in enzymatic dissociation solution I (PBS containing 500 U/ml collagenase [type IV: Sigma Chemical Col, St. Louis, Missouri, USA], 200 U/ml hyaluronidase [type 1-S; Sigma Chemical Co.], 0.2 mg/ml Dnase [type IV; Sigma Chemical Co.], and 1 mg/ml BSA).
- enzymatic dissociation solution I PBS containing 500 U/ml collagenase [type IV: Sigma Chemical Col, St. Louis, Missouri, USA], 200 U/ml hyaluronidase [type 1-S; Sigma Chemical Co.], 0.2 mg/ml Dnase [type IV; Sigma Chemical
- the villi are separated from the supernatant, which contains the syncytium, by centrifugation and incubated for 10 minutes in dissociation solution II (PBS containing 0.25% trypsin [type XII; Sigma Chemical Co.], 2mM EDTA, and 0.2 mg/ml DNase).
- the dissociated cells are isolated by centrifugation, resuspended in 4 ml of medium containing 10% FCS and layered over a preformed Percoll gradient made up in Hanks' balanced salt solution according to the method of Kliman et al, Endocrinol , 118: 1567-1582 (1986).
- the gradient is centrifuged (1,000 x g) for 25 min at room temperature, after which a broad band in the middle of the tube containing the cytotrophoblast cells is removed.
- the cells are washed several times and resuspended in MEM D-valine medium (Gilbert and Migeon, Cell, 5: 11-17 (1975)) containing either 20% dialyzed FCS or 2% Nutridoma, 1 % glutamine, and 50 ⁇ g/ml gentamicin.
- the washed villus pellet is subjected to three cycles of trypsinization (dissociation solution II) and the resulting cells are purified on a Percoll gradient as described above.
- chorionic villi can be isolated and cultured according to standard methods known to those of skill in the art.
- human chorionic villi can be disected from placentas (e.g. , first trimester placentas) and cultured in F12 HAM/DMEM (l:l/v:v) culture medium.
- placentas e.g. , first trimester placentas
- F12 HAM/DMEM l:l/v:v
- compositions may be added to the culture medium.
- these may include, but are not limited to, various labeled amino acids (e.g. radio-labeled amino acids such as [ 35 S]cysteine and [ 35 S]methionine, [ 3 H]leucine and the like) to facilitate the quantitative analysis of newly synthesized proteins, or various pharmacological agents to be tested for their effect on cytotrophoblast differentiation.
- various labeled amino acids e.g. radio-labeled amino acids such as [ 35 S]cysteine and [ 35 S]methionine, [ 3 H]leucine and the like
- hypoxic trophoblasts and hypoxic chorionic villi express various proteins at altered levels as compared to the identical cells cultured under normoxic conditions. These proteins appear to be characteristic of hypoxic trophoblasts and/or hypoxic chorionic villi.
- this invention provides for proteins expressed by mammalian fetal trophoblast cells and/or chorionic villi grown under hypoxic conditions as described above.
- this invention provides for proteins that are over or under- expressed as much as five-fold as compared to identical cells under normoxic conditions.
- Proteins from hypoxic trophoblasts were isolated using 2-dimensional electrophoresis (2D SDS-PAGE) as according to the method of Patton et al. Biotechniques 8: 518(1990), with precautions suggested by Hunkapillar et al. Methods in Enzymology, 91: 227 (1983)as described in Example 2. After calculation of molecular weight from the PAGE gel, the isoelectric point (pi) was determined by isoelectric focussing. Hypoxic trophoblast proteins are listed in Table 1, which includes molecular weights, isoelectric points and whether the protein is upregulated or down regulated in hypoxic trophoblasts. Proteins identified from hypoxic chorionic villi are identified in Table 2 (See, example 3).
- Table 1 Molecular weight and pi of proteins whose expression is altered in hypoxic trophoblasts.
- proteins may be further characterized by a number of means including, but not limited to, amino acid analysis and sequencing. Methods of further purification, amino acid analysis and sequencing are routine and well known in the art. These include, but are not limited to protein purification methods as described in Methods in Enzymology, Guide to Protein Purification, M. Deutscher, ed. Vol. 182 (1990), as well as various cloning and sequencing strategies as described by Sambrook, et al , Molecular Cloning: A Laboratory Manual 2nd Ed. , Vols.
- the proteins are initially isolated using a preparative 2D gel.
- the isolated proteins are then sequenced using mass spectrometry methods as detailed in Example 3.
- the proteins listed in Table 1 are not the only proteins whose expression is altered in hypoxic cytotrophoblasts or hypoxic chorionic villi.
- the present invention thus provides for a method of identifying proteins whose expression is altered under hypoxic conditions. This method includes the steps of culturing cells, under hypoxic conditions and detecting proteins whose expression is altered.
- the cells are trophoblast cells or cells in explanted chorionic villi, cultured as described above.
- the proteins whose expression is altered are preferably identified by 2D SDS-PAGE as described above and in Example 2.
- the proteins whose expression is altered in hypoxic trophoblasts may be used as markers of abnormal placental function (e.g. as caused by an abnormal maternal-placental interface) and therefore as markers for the resulting diseases of pregnancy, such as preeclampsia.
- This invention thus provides for methods of detecting an abnormal placental -maternal interface, hypoxic trophoblasts, hypoxic chorionic villi, abnormal placental function, or a disease of pregnancy (e.g.
- preeclampsia by detecting or measuring the expression levels of a protein whose expression level is altered in hypoxic trophoblasts or chorionic villi as compared to normoxic trophoblasts or normal chorionic villi, respectively.
- the method involves determining the expression level of one or more of the proteins listed in Table 1. While the expression levels of the protein may be determined in vivo, in a preferred embodiment, they are determined ex vivo in a biological sample or in a culture derived from a biological sample. The proteins are preferably quantified in a biological sample derived from a patient.
- a biological sample is a sample of biological tissue or fluid that contains a concentration of the protein being screened that may be correlated with in vivo trophoblast expression levels of the same protein.
- Particularly preferred biological samples include blood, chorion villus biopsy, amniocentesis and cervicovaginal secretions. See, for example, U.S. Patent No. 5,096,830, incorporated herein by reference, which describes cervicovaginal secretions as diagnostic assay samples, and provides means for taking such samples.
- trophoblast-secreted proteins are quantified in whole blood or blood derivatives such as blood plasma or blood serum.
- Blood samples are isolated from a patient according to standard methods well known to those of skill in the art, most typically by venipuncture. Although the sample is typically taken from a human patient, the assays can be used to detect trophoblast-secreted proteins in samples from any mammal, such as primates, rodents, canines, felines, bovines and porcines.
- the sample may be pretreated as necessary by dilution in an appropriate buffer solution or concentrated, if desired.
- an appropriate buffer solution or concentrated, if desired.
- Any of a number of standard aqueous buffer solutions, employing one of a variety of buffers, such as phosphate, Tris, or the like, at physiological pH can be used.
- assays are performed using blood plasma (blood lacking a cellular component) or blood serum (blood lacking a cellular component and clotting factors).
- Means of preparing blood plasma are well known to those of skill in the art and typically involve centrifugation or filtration to produce blood plasma, or clotting followed by centrifugation or filtration to produce blood serum.
- the blood plasma or serum may be diluted by the addition of buffers or other reagents well known to those of skill in the art and may be stored for up to 24 hours at 2-8 °C, or at -20 °C or lower for longer periods, prior to measurement of TSPs.
- the trophoblast-secreted proteins (TSPs) and proteins released by the chorionic villi of this invention may be detected and quantified by any of a number of means well known to those of skill in the art. These may include analytic biochemical methods such as electrophoresis, capillary electrophoresis, high performance liquid chromatography (HPLC), thin layer chromatography (TLC), hyperdif fusion chromatography, 2D electrophoresis as described in Example 2, and the like, or various immunological methods such as fluid or gel precipitin reactions, immunodiffusion (single or double), immunoelectrophoresis, radioimmunoassay(RIA), enzyme-linked immunosorbent assays (ELISAs), immunofluorescent assays, western blotting, and the like.
- analytic biochemical methods such as electrophoresis, capillary electrophoresis, high performance liquid chromatography (HPLC), thin layer chromatography (TLC), hyperdif fusion chromatography, 2D electro
- an immunoassay is an assay that utilizes an antibody to specifically bind to the analyte.
- the immunoassay is characterized by the use of specific binding of the trophoblast secreted protein to a particular antibody as opposed to other physical or chemical properties to isolate, target, and quantify the analyte.
- Antibodies to trophoblast- or chorionic villus-released proteins can be raised to the trophoblast- or chorionic villus-released proteins of the present invention using routine methods well known to those of skill in the art.
- antibodies include immunoglobulin or a population of immunoglobins which specifically bind to an antigen.
- an antibody may be monoclonal or polyclonal including individual, allelic, strain, or species variants, both in their naturally occurring (full-length) forms, various antibody fragmentary forms and in recombinant forms. Additionally antibodies is intended to refer to recombinantly expressed antibodies as in phage-display libraries.
- Antibodies can be raised to the trophoblast- or chorionic villus-released proteins in either their native configurations or in non-native configurations. Anti-idiotypic antibodies may also be used.
- the isolated cytotrophoblast/chorionic villus proteins of the present invention may be used as antigens to raise trophoblast or chorionic villus protein specific antibodies.
- an immunogen (the purified trophoblast- or chorionic villus-released protein) is mixed with an adjuvant and animals are immunized with the mixture. The specific amounts will vary in accordance with the protein and the animals used. In general, 1 to 2 mg/kg of body weight are injected and about 1 to 3 doses is common. The animal's immune response to the immunogen preparation is monitored by taking test bleeds and determining the titer of reactivity to the polypeptide of interest.
- Colonies arising from single immortalized cells are screened for production of antibodies of the desired specificity and affinity for the antigen, and yield of the monoclonal antibodies produced by such cells is enhanced by various techniques, including injection into the peritoneal cavity of a vertebrate host.
- the individual antibody species obtained are the products of immortalized and cloned single B cells from the immune animal generated in response to a specific site recognized on the immunogenic substance.
- a particular trophoblast- or chorionic villus-released protein can be measured by a variety of immunoassay methods.
- immunoassay methods for a review of immunological and immunoassay procedures in general, see Basic and Clinical Immunology (7th ed.), Stites and Terr, eds. (1991).
- the immunoassays of the present invention can be performed in any of several configurations (see, e.g. , those reviewed in Enzyme Immunoassay, Maggio ed. CRC Press, Boca Raton, Florida (1980); Tijan, Practice and Theory of Enzyme Immunoassays, Laboratory Techniques in Biochemistry and Molecular Biology, Elsevier Science Publishers, Amsterdam (1985); and Harlow and Lane
- Immunological binding assays typically utilize a "capture agent" to specifically bind to and often immobilize the analyte (in this case trophoblast- or chorionic villus-released proteins).
- the capture agent is a moiety that specifically binds to the analyte.
- the capture agent is an antibody that specifically binds the trophoblast-secreted proteins listed in Table 1.
- Immunoassays also often utilize a labeling agent to specifically bind to and label the binding complex formed by the capture agent and the analyte.
- the labeling agent may itself be one of the moieties comprising the antibody/analyte complex.
- the labeling agent may be a labeled trophoblast- or chorionic villus-released protein or a labeled anti-trophoblast- or chorionic villus-released protein antibody.
- the labeling agent may be a third moiety, such as another antibody, that specifically binds to the antibody/trophoblast- or chorionic villus-released protein complex.
- the labeling agent is an antibody that specifically binds to the capture agent (e.g. , anti-trophoblast-released protein antibody).
- the capture agent e.g. , anti-trophoblast-released protein antibody
- the label agent may be a goat anti-mouse IgG; an antibody that is specific to the constant region of the mouse antibody.
- proteins capable of specifically binding immunoglobulin constant regions such as protein A or protein G may also be used as the label agent. These proteins are normal constituents of the cell walls of streptococcal bacteria. They exhibit a strong non-immunogenic reactivity with immunoglobulin constant regions from a variety of species. See, generally Kronval, et al , J. Immunol , 111 : 1401-1406 (1973), and Akerstrom, et al, J. Immunol , 135:2589-2542 (1985). Throughout the assays, incubation and/or washing steps may be required after each combination of reagents. Incubation steps can vary from about 5 seconds to several hours, preferably from about 5 minutes to about 24 hours.
- the incubation time will depend upon the assay format, analyte, volume of solution, concentrations, and the like.
- the assays will be carried out at ambient temperature, although they can be conducted over a range of temperatures, such as 10°C to 40°C. a. Non-competitive assay formats.
- Immunoassays for detecting the trophoblast- or chorionic villus-released proteins of the present invention may be either competitive or noncompetitive.
- Noncompetitive immunoassays are assays in which the amount of captured analyte (in this case a trophoblast-secreted protein) is directly measured.
- the capture agent e.g., anti-trophoblast protein antibodies
- the capture agent can be bound directly to a solid substrate where they are immobilized. These immobilized antibodies then capture a trophoblast-released or chorionic villus-released protein present in the test sample.
- the protein thus immobilized is then bound by a labeling agent, such as a second human anti-trophoblast-released protein antibody bearing a label.
- a labeling agent such as a second human anti-trophoblast-released protein antibody bearing a label.
- the second antibody may lack a label, but it may, in turn, be bound by a labeled third antibody specific to antibodies of the species from which the second antibody is derived.
- the amount of analyte (trophoblast-released protein or chorionic villus-released protein) present in the sample is measured indirectly by measuring the amount of an added (exogenous) analyte (e.g. , trophoblast-secreted protein) displaced (or competed away) from a capture agent (e.g. , anti-trophoblast protein antibody) by the analyte present in the sample.
- analyte trophoblast-released protein or chorionic villus-released protein
- a known amount of, in this case, trophoblast-released or chorionic villus-released protein is added to the sample and the sample is then contacted with a capture agent, in this case an antibody that specifically binds the trophoblast-released or chorionic villus-released protein.
- a capture agent in this case an antibody that specifically binds the trophoblast-released or chorionic villus-released protein.
- the amount of trophoblast-released or chorionic villus-released protein bound to the antibody is inversely proportional to the concentration of trophoblast-released or chorionic villus-released protein present in the sample.
- the antibody is immobilized on a solid substrate.
- the amount of analyte (e.g. , trophoblast-secreted protein) bound to the antibody may be determined either by measuring the amount of analyte present in an analyte protein/antibody complex, or alternatively by measuring the amount of remaining uncomplexed analyte protein.
- the amount of analyte protein may be detected by providing a labeled analyte proteins.
- a hapten inhibition assay is another preferred competitive assay. In this assay a known analyte (e.g. , a trophoblast-secreted protein) is immobilized on a solid substrate.
- a known amount of anti-analyte antibody e.g. , anti-trophoblast-secreted protein antibody
- the amount of anti-analyte antibody bound to the immobilized analyte protein is inversely proportional to the amount of analyte present in the sample.
- the amount of immobilized antibody may be detected by detecting either the immobilized fraction of antibody or the fraction of the antibody that remains in solution. Detection may be direct where the antibody is labeled or indirect by the subsequent addition of a labeled moiety that specifically binds to the antibody as described above.
- Western blot (immunoblot) analysis can also be used to detect and quantify the presence of trophoblast-released or chorionic villus-released proteins in the sample.
- the technique generally comprises separating sample proteins by gel electrophoresis on the basis of molecular weight, transferring the separated proteins to a suitable solid support, (such as a nitrocellulose filter, a nylon filter, or derivatized nylon filter), and incubating the sample with the antibodies that specifically bind trophoblast-released or chorionic villus-released proteins.
- the anti-analyte antibodies specifically bind to analyte proteins on the solid support.
- These antibodies may be directly labeled or alternatively may be subsequently detected using labeled antibodies (e.g. labeled sheep anti-mouse antibodies) that specifically bind to the anti-trophoblast-released or anti-chorionic villus- released protein antibodies.
- LOA liposome immunoassays
- a Northern transfer may be used for the quantification of mRNA encoding trophoblast-released or chorionic villus-released proteins.
- the total nucleic acid is isolated from a given cell sample using, for example, an acid guanidinium-phenol-chloroform extraction method and mRNA is isolated by oligo dT column chromatography. The mRNA is then electrophoresed in a suitable electrophoretic gel to separate the mRNA species and the mRNA is transferred from the gel to a nitrocellulose membrane.
- nucleic acid hybridization formats are known to those skilled in the art. For example, common formats include sandwich assays and competition or displacement assays. Hybridization techniques are generally described in Nucleic Acid
- sandwich assays are commercially useful hybridization assays for detecting or isolating nucleic acid sequences.
- Such assays utilize a "capture" nucleic acid covalently immobilized to a solid support and a labeled "signal" nucleic acid in solution.
- the clinical sample will provide the target nucleic acid.
- the "capture” nucleic acid and “signal” nucleic acid probe hybridize with the target nucleic acid to form a "sandwich” hybridization complex.
- the signal nucleic acid cannot hybridize with the capture nucleic acid.
- labelled signal nucleic acids are used to detect hybridization.
- Complementary nucleic acids or signal nucleic acids may be labelled by any one of several methods typically used to detect the presence of hybridized polynucleotides. The most common method of detection is the use of autoradiography with 3 H, ,2i I, 35 S, 14 C, or 32 P-labelled probes or the like. Other labels include ligands which bind to labelled antibodies, fluorophores, chemiluminescent agents, enzymes, and antibodies which can serve as a specific binding pair member for a labeled ligand. Labels are discussed in more detail below.
- Detection of a hybridization complex may require the binding of a signal generating complex to a duplex of target and probe polynucleotides or nucleic acids. Typically, such binding occurs through ligand and anti-ligand interactions as between a ligand-conjugated probe and an anti-ligand conjugated with a signal.
- the label may also allow indirect detection of the hybridization complex.
- the label is a hapten or antigen
- the sample can be detected by using antibodies.
- a signal is generated by attaching fluorescent or enzyme molecules to the antibodies or, in some cases, by attachment to a radioactive label, (see, e.g. , pp 9-20 in Practice and Theory of Enzyme Immunoassays, Laboratory Techniques in Biochemistry and Molecular Biology, Burdon, R.H. , van Knippenberg, P.H., Eds. , Elsevier (1985))
- the sensitivity of the hybridization assays may be enhanced through use of a nucleic acid amplification system which multiplies the target nucleic acid being detected.
- a nucleic acid amplification system which multiplies the target nucleic acid being detected.
- PCR polymerase chain reaction
- LCR ligase chain reaction
- Other methods recently described in the art are the nucleic acid sequence based amplification (NASBA, Cangene, Mississauga, Ontario) and Q Beta Replicase systems.
- An alternative means for determining the level of expression of a gene encoding a trophoblast secreted protein is in situ hybridization. In situ hybridization assays are well known and are generally described in Angerer, et al. , Methods Enzymol. , 152: 649-660 (1987).
- cells or tissue specimens are fixed to a solid support, typically a glass slide. If DNA is to be probed, the cells are denatured with heat or alkali. The cells are then contacted with a hybridization solution at a moderate temperature to permit annealing of labeled probes specific to nucleic acids encoding trophoblast-released and/or chorionic villus-released proteins.
- the probes are preferably labelled with radioisotopes or fluorescent reporters.
- Transcription levels of mRNA may also be quantified by nucleic acid amplification methods such as quantitative polymerase chain reaction (quantitative PCR).
- quantitative PCR involves simultaneously co-amplifying a known quantity of a control sequence using the same primers. This provides an internal standard that may be used to calibrate the PCR reaction.
- One preferred internal standard is a synthetic AW106 cRNA.
- the AW 106 cRNA is combined with RNA is isolated from the sample according to standard techniques known to those of skill in the art.
- the RNA is then reverse transcribed using a reverse transcriptase to provide copy DNA.
- the cDNA sequences are then amplified using labeled primers.
- the amplification products are separated, typically by electrophoresis, and the amount of radioactivity (proportional to the amount of amplified product) is determined.
- the amount of mRNA in the sample is then calculated by comparison with the signal produced by the known AW106 RNA standard.
- Detailed protocols for quantitative PCR are provided in PCR Protocols, A Guide to Methods and Applications, Innis et al , Academic Press, Inc. N.Y., (1990).
- the particular label or detectable group used in the assay is not a critical aspect of the invention, so long as it does not significantly interfere with the specific binding of the antibody or nucleic acid used in the assay.
- the detectable group can be any material having a detectable physical or chemical property.
- detectable labels have been well-developed in the field of immunoassays nucleic acid hybridization and, in general, most any label useful in such methods can be applied to the present invention.
- a label is any composition detectable by spectroscopic, photochemical, biochemical, immunochemical, electrical, optical or chemical means.
- Useful labels in the present invention include magnetic beads (e.g. DynabeadsTM), fluorescent dyes (e.g.
- radiolabels e.g. , 3 H, 125 I, 35 S, 14 C, or 3 P
- enzymes e.g. , horse radish peroxidase, alkaline phosphatase and others commonly used in an ELISA
- colorimetric labels such as colloidal gold or colored glass or plastic (e.g. polystyrene, polypropylene, latex, etc.) beads.
- the label may be coupled directly or indirectly to the desired component of the assay according to methods well known in the art.
- Non-radioactive labels are often attached by indirect means.
- a ligand molecule e.g., biotin
- the ligand then binds to an anti-ligand (e.g. , streptavidin) molecule which is either inherently detectable or covalently bound to a signal system, such as a detectable enzyme, a fluorescent compound, or a chemiluminescent compound.
- an anti-ligand e.g. , streptavidin
- a number of ligands and anti-ligands can be used.
- a ligand has a natural anti-ligand, for example, biotin, thyroxine, and cortisol, it can be used in conjunction with the labeled, naturally occurring anti-ligands.
- a haptenic or antigenic compound can be used in combination with an antibody.
- the molecules can also be conjugated directly to signal generating compounds, e.g. , by conjugation with an enzyme or fluorophore.
- Enzymes of interest as labels will primarily be hydrolases, particularly phosphatases, esterases and glycosidases, or oxidoreductases, particularly peroxidases.
- Fluorescent compounds include fluorescein and its derivatives, rhodamine and its derivatives, dansyl, umbelliferone, etc.
- Chemiluminescent compounds include luciferin, and 2,3-dihydrophthalazinediones, e.g., luminol.
- Means of detecting labels are well known to those of skill in the art.
- means for detection include a scintillation counter or photographic film as in autoradiography.
- the label is a fluorescent label, it may be detected by exciting the fluorochrome with the appropriate wavelength of light and detecting the resulting fluorescence. The fluorescence may be detected visually, by means of photographic film, by the use of electronic detectors such as charge coupled devices (CCDs) or photomultipliers and the like.
- CCDs charge coupled devices
- enzymatic labels may be detected by providing the appropriate substrates for the enzyme and detecting the resulting reaction product.
- simple colorimetric labels may be detected simply by observing the color associated with the label. Thus, in various dipstick assays, conjugated gold often appears pink, while various conjugated beads appear the color of the bead.
- agglutination assays can be used to detect the presence of the target antibodies.
- antigen-coated particles are agglutinated by samples comprising the target antibodies.
- none of the components need be labeled and the presence of the target antibody is detected by simple visual inspection.
- the solid surface may be a membrane (e.g. , nitrocellulose), a microtiter dish (e.g. , PVC, polypropylene, or polystyrene), a test tube (glass or plastic), a dipstick (e.g. glass, PVC, polypropylene, polystyrene, latex, and the like), a microcentrifuge tube, or a glass or plastic bead.
- the desired component may be covalently bound or noncovalently attached through nonspecific bonding.
- organic and inorganic polymers both natural and synthetic may be employed as the material for the solid surface.
- Illustrative polymers include polyethylene, polypropylene, poly(4-methylbutene), polystyrene, polymethacrylate, poly(ethylene terephthalate), rayon, nylon, poly(vinyl butyrate), polyvinylidene difluoride (PVDF), silicones, polyformaldehyde, cellulose, cellulose acetate, nitrocellulose, and the like.
- Other materials which may be employed include paper, glasses, ceramics, metals, metalloids, semiconductive materials, cements or the like.
- substances that form gels such as proteins (e.g. , gelatins), lipopolysaccharides, silicates, agarose and polyacrylamides can be used.
- Polymers which form several aqueous phases such as dextrans, polyalkylene glycols or surfactants, such as phospholipids, long chain (12-24 carbon atoms) alkyl ammonium salts and the like are also suitable. Where the solid surface is porous, various pore sizes may be employed depending upon the nature of the system.
- a plurality of different materials may be employed, particularly as laminates, to obtain various properties.
- protein coatings such as gelatin can be used to avoid non-specific binding, simplify covalent conjugation, enhance signal detection or the like.
- the surface will usually be polyfunctional or be capable of being polyfunctionalized.
- Functional groups which may be present on the surface and used for linking can include carboxylic acids, aldehydes, amino groups, cyano groups, ethylenic groups, hydroxyl groups, mercapto groups and the like.
- the manner of linking a wide variety of compounds to various surfaces is well known and is amply illustrated in the literature. See, for example, Immobilized Enzymes, Ichiro Chibata, Halsted Press, New York, 1978, and Cuatrecasas, J. Biol. Chem. 245 3059 (1970) which are incorporated herein by reference.
- Noncovalent binding is typically nonspecific absorption of a compound to the surface.
- the surface is blocked with a second compound to prevent nonspecific binding of labeled assay components.
- the surface is designed such that it nonspecifically binds one component but does not significantly bind another.
- a surface bearing a lectin such as Concanavalin A will bind a carbohydrate containing compound but not a labeled protein that lacks glycosylation.
- Various solid surfaces for use in noncovalent attachment of assay components are reviewed in U.S. Patent Nos. 4,447,576 and 4,254,082, which are incorporated herein by reference.
- the abnormal maternal-placental interface is detected by a statistically significant alteration in the concentration of one or more of the trophoblast-released and/or chorionic villus-released proteins of the present invention in a particular assay format as compared to the concentration of the same protein determined in the same assay format for a sample from a mammal having a healthy maternal-placental interface.
- Healthy, baseline levels of various trophoblast- or chorionic villus-released proteins may be determined by routine screening of samples isolated from mammals having a healthy maternal-placental interface using any of the assay methods described above followed by standard statistical analysis using methods well known to those of skill in the art.
- the in vitro model provided by the present invention may be used to screen for therapeutic agents that mitigate the development or effects of an abnormal maternal-placental interface.
- these method involve culturing hypoxic trophoblasts or chorionic villi, as described above, in the presence of a potential therapeutic agent and measuring changes in the invasiveness of the trophoblasts. An increase of invasiveness would indicate that the therapeutic agent, may aid in restoration of a normal trophoblast phenotype and hence restoration of normal placental function when utilized in vivo.
- cytotrophoblasts are plated on Matrigel coated polycarbonate filters. After culture for a defined period of time, the samples are fixed, dehydrated and processed for electron microscopy. Cells penetrating the Matrigel surface can then be quantified from the electron microscope images.
- hypoxic trophoblasts or hypoxic chorionic villi for the effect of potential therapeutic agents on the expression level of the proteins whose expression is altered under hypoxic conditions. It is believed that proteins secreted by the trophoblasts and/or chorionic villi are responsible for numerous maternal complications associated with an abnormal maternal-placental interface. Restoration (e.g. downregulation) of normal expression of these proteins will mitigate or eliminate diseases of pregnancy caused by these proteins.
- agents may be screened for their ability to block, alter, or otherwise prevent the action of released proteins.
- agents include, but are not limited to, agents that inhibit the activity of the secreted proteins such as metalloproteinase inhibitors or serine protease inhibitors, agents (e.g. antibodies, lectins, or other ligands) that bind to and inactivate the TSP or tag the TSP protein for destruction by the immune system.
- agents may act on the expression of the TSP from its respective nucleic acid.
- agents may include suppressor genes, antisense molecules, nucleases, and ribozymes.
- compositions that may adversely effect trophoblast differentiation in a pregnant mammal and thereby induce the formation of an abnormal maternal-placental interface.
- trophoblast differentiation in a pregnant mammal and thereby induce the formation of an abnormal maternal-placental interface.
- the trophoblasts, or chorionic villi are cultured under normal conditions and assayed for changes in phenotype as compared to normal and/or hypoxic trophoblasts. Phenotypic changes similar to hypoxic trophoblasts or hypoxic chorionic villi are indicative of possible interference or alteration of the maternal- placental interface by the agent.
- the assay may comprise measuring the changes in the levels of expression of one or more proteins expressed by the trophoblasts or chorionic villi. Proteins whose expression is typically altered in hypoxic trophoblasts or hypoxic chorionic villi are preferably assayed, while the proteins listed in Table 1 are most preferably assayed.
- kits for the diagnosis of women having an abnormal maternal-placental interface and therefore at risk for diseases of pregnancy such as threatened abortion, intrauterine growth retardation, gestational trophoblast diseases including molar pregnancy, choriocarcinoma, placental site tumors, ectopic pregnancy, proteinuria, pregnancy induced hypertension and preeclampsia.
- the kits preferably include an antibody that specifically binds to one of the trophoblast- released or chorionic villus-released proteins of the present invention or a nucleic acid that specifically hybridizes to another nucleic acid that encodes one or more of the TSPs or chorionic villus-released proteins.
- the antibody may be free or immobilized on a solid support such as a test tube, a microtiter plate, a dipstick and the like.
- the kit may also contain instructional materials teaching the use of the antibody or nucleic acid in an assay for the detection of an abnormal maternal-placental interface.
- the kit may contain a second antibody that specifically binds the TSP.
- the second antibody may be labeled, or alternatively, the kit may contain a labeled third antibody that specifically binds the second antibody.
- the kit may also contain appropriate control series of TSP, buffer solutions, positive and negative controls, washing solutions, dilution buffers and the like for the preparation and analysis of the TSPs in blood or other biological samples.
- the normal human cell type most closely resembling the phenotype of a cancer cell is the placental trophoblast (Manes, Cancer Res. , 34: 2044-2052 (1974)), which shares with malignant cells the ability to invade other tissues, to metastasize, and to evade the body's immune response. Only in rare instances, however do trophoblasts become truly malignant as choriocarcinoma.
- a wide range of cancer cells secrete hormones and proteins characteristic of trophoblasts, and it has been proposed that malignancy is, in part, a pathological recapitulation of normal placental development (Conway, J. Theoret. Biol , 100: 1-24 (1983)).
- the in vitro model of the present invention may also be used as a general model for invasive cells types, in particular for invasive cancer cells.
- the hypoxic trophoblasts of the present invention may also be used to screen for therapeutic agents that inhibit invasiveness and therefore reduce metastases.
- the hypoxic trophoblasts may be used to screen changes in invasiveness or, alternatively, for alterations in the expression of proteins that mediate the invasive activity of the cells.
- the hypoxic trophoblasts of the present invention may also be used to identify previously unknown proteins found on cancer, in particular invasive cancer, cells. First, proteins whose expression is altered in hypoxic trophoblasts, are identified as described above.
- cancer cells are screened for the presence of the same or closely related proteins.
- Methods of screening are well known to those of skill in the art. Preferred methods involve screening for immunologic cross reactivity with antibodies raised against the trophoblast proteins.
- cancer cell mRNA may be screened for sequences that hybridize to nucleic acid probes complementary to nucleic acid sequences or subsequences that encode the trophoblast secreted proteins.
- cytotrophoblasts are isolated as described by Librach et al , J. Cell. Biol , 113: 437-449 (1991). Briefly, cytotrophoblasts are isolated from first, second and third trimester human placentas according to the methods of Fisher, et al. J. Cell Biol , 109: 891-902 (1989), Fisher et al Troph. Res. , 4: 115-138 (1990); and Kliman et al. Endocrin. , 118: 1567-1582 (1986), respectively.
- Enzyme incubation times differ for different lots of collagenase, hyaluronidase, and trypsin. Yields per gram of placentas are about 0.5 - 1.0 x 10 6 cells. Greater than 95 % of the cells are cytotrophoblasts, as determined by fluorescent- activated cell sorting.
- Remaining leukocytes are removed using an antibody to CD-45, a protein tyrosine phosphatase found on bone marrow-derived cells (Charbonneau et al. Proc. Nat. Acad. Sc , USA, 86: 5252-5256 (1989)), but not on cytotrophoblasts.
- the antibody Hie; Becton Dickinson and Col, Mountain View, CA, USA, or IgG affinity purified from the GAP 8.3 hybridoma; American Type Culture Collection, Rockville Maryland, USA
- magnetic beads Advanced Magnetics Inc. , Cambridge, Massachusetts, USA
- the CD-45 -positive cells are removed by means of a Bio-Mag Separator (advanced Magnetics, Inc.).
- Cells are cultured in conditioned medium (DMEM H21 containing 2% Nutridoma) for 48 hr. It is important to note that serum is not added to the culture medium. Thus, complications in the analysis caused by the introduction of this major source of protein are avoided.
- Control cultures are placed in a standard tissue culture incubator containing 8% carbon dioxide and air. When cultured under hypoxic conditions, cells are placed in sealed culture chambers containing 10% CO 2 , 0 to 10% O 2 with the balance being nitrogen.
- Differentiation of the normoxic cytotrophoblasts is accompanied by acquisition of an invasive phenotype, as well as by up regulation of the expression of integrins ⁇ 5/31 and ll ⁇ l, the 92 kDa type IV collagenase and HLA-G.
- hypoxic cytotrophoblasts have a distinctly different antigenic phenotype. They upregulate ⁇ 5/31 expression, showing that they are capable of carrying out at least of a portion of the normal differentiation program. However, they express very low levels of all l, the 92 kDa type IV collagenase and HLA-G. The cells also fail to invade.
- Cytotrophoblasts cultured in normoxic and hypoxic conditions, as described in Example 1, are labeled by incorporating in the culture medium 50 ⁇ Ci/ml [ 35 S]cysteine and [ 35 S]methionine to facilitate the quantitative analysis of newly synthesized proteins.
- 125 ⁇ Ci/ml 14 C-labeled amino acids high specific activity l4 C- methylated mixture could also be used.
- the extruded IEF tube gels are loaded on top of 1 mm thick SDS-PAGE slab gels (pH 8.8) and electrophoresed for 5 h under constant power (20 watts/gel). Following electrophoresis, the gels are fixed in 50% methanol containing 10% acetic acid for 12-18 hr, soaked in fluor and exposed to film for various time periods.
- Proteins whose expression is altered in hypoxic trophoblasts are listed in Table 1.
- trophoblasts cultured under hypoxia showed at least a fivefold increase in their production of 5 proteins (designated protein A through E in Table 1) ranging in molecular weight from about 21 to about 62 kDa.
- proteins E, F and G proteins whose expression was downregulated in hypoxic trophoblasts.
- Cytotrophoblasts A Quantitative computer-based analysis of 2D gels.
- fluorographic exposures of control gels from control and experimental cultures are be visually inspected and computer matched and analyzed. Multiple exposures are scanned with a digital imaging camera interfaced to a SUN3/260 computer. The data are analyzed as previously described (Bersini et al , Electrophoresis, 11: 232 (1990)) with the PDQUEST software system, a modification of the software originally developed by Garrels, Meth. Enzymology, 100: 411 (1983).
- This system permits the analysis of 1000-2000 protein spots per gel, depending upon the cell-type and the length of time the gels are exposed to film. These spots may range in abundance from > 10,000 ppm (1 %) of total labeled protein (e.g. , abundant proteins such as actin) to ⁇ 10 ppm for the most faint proteins, detected only after a one-month fluorographic exposure. An abundance of 10 ppm corresponds to approximately 10,000 copies of the protein per cell.
- Protein spots that are highly resolved and induced in relative abundance of hypoxia are selected for sequencing using the mass spectrometric methods described below.
- Preparative gels are run to obtain purified preparations containing several hundred picomoles of individual proteins.
- the methods are similar to those described above for analytical gels with the following modification.
- samples are concentrated severalfold using a Centricon 10 centrifugal concentrator. Isoelectric focusing is done in 3.0 mm internal diameter glass tubes.
- IEF gels ampholytes are increased to 5.5% and acrylamide is increased to 4% .
- Extruded IEF gels are soaked for 30 min. in pH 6.8 equilibration buffer.
- the second dimension SDS slab gels each contain a 2 cm stacking gel (pH 6.8), and the IEF gels are sealed on top of the SDS slab gels with agarose. Following electrophoresis, gels are stained with Coomassie blue, the protein spots of interest excised with a scalpel, and the gel plugs stored frozen at 20°C until electroelution.
- Proteins are isolated from 2-D gel plugs using an electroelution apparatus designed by Hunkapillar (1983), supra, or Hoefer Scientific Instruments (San Francisco, California, USA). (Previous studies have demonstrated that more protein can be recovered from polyacrylamide gels by electroelution than by electroblotting onto nitrocellulose or polyvinylidene difluoride membranes.) Electroelution is performed at room temperature and the selected apparatus is fitted with dialysis membrane having the appropriate pore size to insure quantitative recovery of proteins while allowing unwanted impurities to pass. Subsequently, a Konigsberg acetone precipitation (Konigsberg et al. Meth. Enzymol , 91: 254 (1983)) is carried out in order to remove Coomassie blue stain and residual SDS.
- the digestion is carried out for 16 hr to insure complete digestion of the proteins. Separation of the resulting digestion components is achieved on a reserved phase C, g , microbore (1.0 mm diameter x 10 cm) HPLC column which, prior to sample injection, is equilibrated with 0.1 % trifluroroacetic acid (TFA) in water (Solvent A).
- Matrix assisted laser desorption ionization is used (Hall et al. , Proc. Nat. Acad. Sci. USA, 90: 1927 (1993). This highly sensitive technique allows determination of the peptide molecular mass for each HPLC fraction from as little as 1/50 of the entire sample.
- CID collision induced dissociation
- the first mass spectrometer is used to select the 12 C isobar of the protonated molecular ion of the peptide of interest. This species is then be accelerated into a collision cell, floating at 4keV, where it collides with helium atoms. The resulting collisions impart sufficient vibrational energy into the peptide to induce fragmentation. These fragments then pass into the second mass spectrometer where they are mass analyzed and their relative abundances recorded. Complete high energy CID mass spectra are recorded every 11 sec. as sample begins to flow into the ion source from a liquid inlet system containing the peptides of interest. This recently developed unique technology optimizes sensitivity and minimizes low level sample losses such that peptide sequence analysis can be carried out at the subpicomole level.
- sequences of the induced proteins may be confirmed by redundant sequencing either by tandem mass spectrometry or, alternatively, the nucleic acid sequences encoding the proteins are cloned and sequenced using standard techniques known to those of skill in the art.
- Mass spectrometry (MS) sequencing was used to determine the identity of proteins whose abundance changes in hypoxia. This approach was initially applied to one protein spot whose release into culture media was dramatically increased when chorionic villi were cultured under hypoxic conditions. This spot was excised from six gels and subjected to a 5-step in-gel trypsin digestion as follows:
- the gel plugs were macerated to minimize the size of gel particle and to facilitate enzyme access to the trapped protein.
- the gel particles were destained by three washes (15 min each) with 25 mM ammonium bicarbonate/50% acetonitrile.
- the trapped protein was digested by rehydrating the gel particles in 25 mM ammonium bicarbonate buffer containing 0.1 ⁇ g/ ⁇ L high grade trypsin.
- the resulting mass spectra contained two types of information. First a peptide -mass fingerprint was obtained by measuring the monoisotopic molecular masses ( ⁇ 0.5 Da) of several peptides in the digest. Then peptide sequence information was obtained in the form of a peptide fragment ion tag by acquiring MALDI post-source decay spectra following ion-gating of individual peptides. a peptide fragment ion tag could contain a variety of sequence-ion types produced by several different cleavage processes (a, b, y, a-NH 3 , b-NH 3 , y-NH 3 , b-H 2 O, and ammonium ions).
- Genomic databases e.g. , GenBank
- GenBank Genomic databases
- the protein was apolipoprotein a-l (apo a-l).
- the protein match was bovine, not human.
- the sampled protein came from the medium in which the villi were incubated during the first 24 hours of the 72 hour culture period (H/D with 10% FCS). Nevertheless it was hypothesized that release of the human protein might be similarly regulated.
- a mouse monoclonal antibody against human apo a-I was used to analyze, by Western blotting, culture medium samples from chorionic villi maintained under control and experimental hypoxia conditions. In control samples, a band corresponding to the molecular weight of apo a-l (28 kDa) was barely visible. In contrast, the abundance of this protein was greatly increased in culture medium samples from villi maintained in 2% O 2 . a 17 kDa band, which it is believed corresponds to a fragment produced by cleavage in a proteinase-sensitive region of the molecule was also detected. Higher molecular weight diffuse bands were due to a low level of antibody reactitivity with the protein components of Nutridoma.
- a protein of spot n (where n is the spot number) will appear in the same position relative to the other spots as the spot n in Figure 1 and/or Figure 2.
- the protein abnormally expressed under hypoxic conditions can also be a fragment, a mutant, a post-translationally modified variant, a species variant, or another variant of the identified protein.
- CK cytokeratin
- the apo a-I antibody reacted with various elements of the floating chorionic villi, including cytotrophoblasts and the syncytial brush border.
- hypoxic cytotrophoblasts and chorionic villi provide a useful model system for the abnormal maternal/placenta interface. Proteins whose regulation varies with hypoxia and which appear to be good markers for the identification (diagnosis) of the abnormal maternal/placental interface and attendant pathology (e.g. , preeclampsia) were identified. D) Alteration of culture media.
- chorionic villi are cultured in F12 HAM/DMEM (l: l/v:v) — medium 3.
- F12 HAM/DMEM l: l/v:v
- Figures 1 and 2 An illustration of two-dimensional electrophoresis gels produced from chorionic villus cultures in medium lacking FCS under normoxic and hypoxic conditions respectively are provided in Figures 1 and 2, respectively.
- hypoxia changes the repertoire of substances the placenta synthesizes and/or releases.
- factors include molecules whose expression is known to be regulated by O 2 tension in other cells (interleukins and growth factors), known proteins whose abundance was not previously known to change in preeclampsia (e.g. , apo a-I), and proteins that have yet to be sequenced.
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Priority Applications (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP8531343A JPH11504318A (en) | 1995-04-18 | 1996-04-18 | Changes in protein expression in hypoxic trophoblasts |
| AU55575/96A AU718493B2 (en) | 1995-04-18 | 1996-04-18 | Altered protein expression in hypoxic trophoblasts |
| EP96912916A EP0822940A2 (en) | 1995-04-18 | 1996-04-18 | Altered protein expression in hypoxic trophoblasts |
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US42340995A | 1995-04-18 | 1995-04-18 | |
| US08/423,409 | 1995-04-18 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| WO1996033214A2 true WO1996033214A2 (en) | 1996-10-24 |
| WO1996033214A3 WO1996033214A3 (en) | 1996-12-27 |
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ID=23678805
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/US1996/005441 Ceased WO1996033214A2 (en) | 1995-04-18 | 1996-04-18 | Altered protein expression in hypoxic trophoblasts |
Country Status (5)
| Country | Link |
|---|---|
| EP (1) | EP0822940A2 (en) |
| JP (1) | JPH11504318A (en) |
| AU (1) | AU718493B2 (en) |
| CA (1) | CA2218535A1 (en) |
| WO (1) | WO1996033214A2 (en) |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2001013117A3 (en) * | 1999-08-13 | 2002-01-17 | Oxford Glycosciences Uk Ltd | Proteins, genes and their use for diagnosis and treatment of breast cancer |
Family Cites Families (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| SU827030A1 (en) * | 1978-12-27 | 1981-05-07 | Московский Ордена Трудового Красногознамени Медицинский Стоматологическийинститут Им. H.A.Семашко | Method of diagnosis of fetus condition |
| US5196523A (en) * | 1985-01-01 | 1993-03-23 | The University Of Southern California | Control of gene expression by glucose, calcium and temperature |
| US4943527A (en) * | 1985-10-04 | 1990-07-24 | California Biotechnology Inc. | Mature apoai protein production under serum free culturing conditions |
| US5141849A (en) * | 1990-06-08 | 1992-08-25 | The United States Of America As Represented By The Department Of Health And Human Services | Marker for early detection of human hydatidiform moles and choriocarcinomas |
| WO1993024838A1 (en) * | 1992-05-29 | 1993-12-09 | Adeza Biomedical Corporation | Screening method for identifying women at increased risk for preterm delivery |
-
1996
- 1996-04-18 WO PCT/US1996/005441 patent/WO1996033214A2/en not_active Ceased
- 1996-04-18 AU AU55575/96A patent/AU718493B2/en not_active Ceased
- 1996-04-18 CA CA 2218535 patent/CA2218535A1/en not_active Abandoned
- 1996-04-18 JP JP8531343A patent/JPH11504318A/en active Pending
- 1996-04-18 EP EP96912916A patent/EP0822940A2/en not_active Withdrawn
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2001013117A3 (en) * | 1999-08-13 | 2002-01-17 | Oxford Glycosciences Uk Ltd | Proteins, genes and their use for diagnosis and treatment of breast cancer |
Also Published As
| Publication number | Publication date |
|---|---|
| AU5557596A (en) | 1996-11-07 |
| AU718493B2 (en) | 2000-04-13 |
| JPH11504318A (en) | 1999-04-20 |
| WO1996033214A3 (en) | 1996-12-27 |
| EP0822940A2 (en) | 1998-02-11 |
| CA2218535A1 (en) | 1996-10-24 |
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