TWI888054B - Dengue fever progression assessment method and system thereof - Google Patents
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本發明是關於一種登革熱進展評估方法及其系統,特別是關於一種利用生物統計分析結合主成分分析(principal component analysis, PCA)演算法,對細胞激素數據及血液標記物數據進行分析,進而可正確預測登革熱進展之評估方法及其系統。The present invention relates to a dengue fever progression assessment method and system, and in particular to an assessment method and system that utilizes biostatistics analysis combined with principal component analysis (PCA) algorithm to analyze cytokine data and blood marker data, thereby accurately predicting the progression of dengue fever.
登革熱(dengue fever)是一種由登革病毒(dengue virus, DENV)引起的急性病毒性感染疾病,其係藉由帶有登革病毒之蚊蟲叮咬而傳播,該等蚊蟲主要包括埃及斑蚊(Aedes aegypti)及白線斑蚊(Aedes albopictus);此種疾病通常在熱帶和亞熱帶地區流行,並且在這些區域是一個公共衛生上的重要議題。登革熱的症狀範圍從輕微的發燒和關節痛到嚴重的出血和休克,嚴重的情況可能導致死亡。Dengue fever is an acute viral infection caused by dengue virus (DENV). It is transmitted by the bites of mosquitoes carrying the dengue virus, mainly Aedes aegypti and Aedes albopictus. The disease is common in tropical and subtropical regions and is a major public health issue in these regions. Symptoms of dengue fever range from mild fever and joint pain to severe bleeding and shock, and severe cases may lead to death.
登革熱的症狀通常在感染後4~10天內出現,表現為突然的高燒、頭痛、肌肉和關節痛、皮疹和出血傾向等;在一些病例中,登革熱可能進展為嚴重的出血性熱帶病,在此種情況下,患者可能出現血小板減少、器官衰竭和休克等危及生命的併發症。Symptoms of dengue fever usually appear within 4 to 10 days after infection, and include sudden high fever, headache, muscle and joint pain, rash and bleeding tendency. In some cases, dengue fever may progress to severe hemorrhagic tropical disease, in which case patients may experience life-threatening complications such as thrombocytopenia, organ failure and shock.
登革熱以嚴重程度進行分級,通常分為輕症、中重症和極重症,這些分級是根據患者的症狀和臨床表現而定。輕症的表現為無症狀,抑或是發燒、頭痛、肌肉和關節痛,可能伴隨著皮疹,但患者通常保持清醒,沒有器官功能受損的跡象;中重症的表現為嚴重的頭痛和疲勞、血小板減少及器官功能受損,如再稍微嚴重一點則可能出現出血傾向、血壓下降及器官功能衰竭,需要住院治療;而極重症的患者可能有休克、器官功能嚴重衰竭,於住院時需要以輸血抑或其他支持性療法進一步治療。Dengue fever is graded according to severity, usually mild, moderate, and severe, based on the patient's symptoms and clinical manifestations. Mild cases may present with no symptoms or fever, headache, muscle and joint pain, which may be accompanied by a rash, but the patient usually remains awake and has no signs of organ damage; moderate to severe cases present with severe headache and fatigue, thrombocytopenia, and organ damage. If the disease is a little more severe, there may be bleeding tendency, low blood pressure, and organ failure, requiring hospitalization; and patients with severe cases may have shock and severe organ failure, requiring further treatment with blood transfusions or other supportive therapies while in hospital.
目前對於登革熱的嚴重程度進行分級的檢測方法,主要包括臨床症狀和實驗室檢驗,醫生會評估患者的症狀,並通過檢測白血球細胞數量(white blood cells, WBC,單位為10 6/L)、血紅蛋白濃度(hemoglobin,單位為g/dL)、血比容(hematocrit,單位為%)、血小板數量(platelet,單位為10 9/L)、丙胺酸轉胺酶濃度(GPT,單位為U/L)以及血清肌酸酐濃度(creatinine,單位為mg/dL)等血液標記物指標來評估病情的嚴重程度。 The current detection methods for grading the severity of dengue fever mainly include clinical symptoms and laboratory tests. Doctors will evaluate the patient's symptoms and assess the severity of the disease by testing blood markers such as white blood cells (WBC, unit is 10 6 /L), hemoglobin concentration (hemoglobin, unit is g/dL), hematocrit (hematocrit, unit is %), platelet count (platelet, unit is 10 9 /L), alanine aminotransferase concentration (GPT, unit is U/L) and serum creatinine concentration (creatinine, unit is mg/dL).
然而,即便檢測出患者確實有感染登革病毒,但並無法得知該名患者是否會進一步發展為中重症或極重症,故檢測出患者感染登革病毒時,基本上均建議患者住院觀察或進一步進行治療,進而導致醫療系統負擔加重;如住院後患者並未發展為中重症或極重症,除耗費醫療人力及資源外,更會使得發展為中重症或極重症之患者無法得到完善的照護及治療。However, even if a patient is found to be infected with dengue virus, it is impossible to know whether the patient will further develop into moderate, severe or extremely severe illness. Therefore, when a patient is found to be infected with dengue virus, it is generally recommended that the patient be hospitalized for observation or further treatment, which will increase the burden on the medical system. If the patient does not develop into moderate, severe or extremely severe illness after hospitalization, in addition to wasting medical manpower and resources, patients who develop into moderate, severe or extremely severe illness will not be able to receive complete care and treatment.
綜上所述,對於登革熱疾病的臨床實務上迫切需要有效的評估方式介入,提供醫師額外的患者細胞激素相關數據輔以血液標記物數據作為參考,以加速判斷登革病患是否需要接受住院治療抑或是僅須居家治療即可,使醫療人力及資源可妥善運用以減輕醫療系統負擔。In summary, there is an urgent need for effective assessment intervention in the clinical practice of dengue fever, providing doctors with additional patient cytokine-related data supplemented by blood marker data as a reference, so as to speed up the judgment of whether dengue patients need to be hospitalized or only need home treatment, so that medical manpower and resources can be properly used to reduce the burden on the medical system.
有鑑於上述習知登革熱進展之評估問題,本發明之目的在於提供一種登革熱進展評估方法及其系統,以利醫護人員可對登革病患是否需住院進行快速的醫療決策,提升醫療體系之工作效率並減輕醫療人力之負擔,並使病患可獲得即時及妥善之治療。In view of the above-mentioned problem of assessing the progress of dengue fever, the purpose of the present invention is to provide a method and system for assessing the progress of dengue fever, so that medical staff can make quick medical decisions on whether dengue patients need to be hospitalized, improve the work efficiency of the medical system, reduce the burden of medical manpower, and enable patients to receive timely and appropriate treatment.
根據本發明之一目的,提出一種登革熱進展評估方法,其包含下列步驟:通過輸入裝置輸入登革病患之複數個細胞激素數據及複數個血液標記物數據,儲存於儲存裝置;藉由處理器存取儲存裝置,對複數個細胞激素數據及複數個血液標記物數據進行生物統計分析,找出具有顯著差異之細胞激素數據及血液標記物數據,接著將具有顯著差異之細胞激素數據及血液標記物數據以主成分分析(PCA)演算法建立登革熱進展評估模型;通過輸入裝置取得待評估之細胞激素數據及血液標記物數據,以處理器進行判讀程序獲得登革熱進展判讀結果;藉由輸出裝置存取儲存裝置,將登革熱進展判讀結果輸出。According to one purpose of the present invention, a method for evaluating the progress of dengue fever is provided, which comprises the following steps: inputting a plurality of cytokine data and a plurality of blood marker data of a dengue patient through an input device and storing them in a storage device; accessing the storage device through a processor, performing biostatistical analysis on the plurality of cytokine data and the plurality of blood marker data, and finding out the cytokine data and the blood marker data with significant differences. Blood marker data, and then the cytokine data and blood marker data with significant differences are used to establish a dengue fever progression assessment model using a principal component analysis (PCA) algorithm; the cytokine data and blood marker data to be evaluated are obtained through an input device, and a dengue fever progression interpretation result is obtained by a processor through a reading process; the dengue fever progression interpretation result is output by accessing a storage device through an output device.
其中,所述複數個細胞激素數據係為各類細胞激素之表達量(pg/ml),而所述複數個血液標記物數據係包含白血球細胞數量、血紅蛋白濃度、血比容、血小板數量、丙胺酸轉胺酶濃度以及血清肌酸酐濃度;所述複數個細胞激素數據以及所述複數個血液標記物數據均係由患者之血液檢體中取得。Among them, the multiple cytokine data are the expression levels (pg/ml) of various cytokines, and the multiple blood marker data include white blood cell count, hemoglobin concentration, hematocrit, platelet count, alanine transaminase concentration and serum creatinine concentration; the multiple cytokine data and the multiple blood marker data are all obtained from the patient's blood sample.
所述細胞激素具體為24個,其種類如表1所示:There are 24 cytokines, and their types are shown in Table 1:
表1
由於細胞激素以及血液標記物之數量較多,直接以機器學習之方式對大量的細胞激素數據及血液標記物數據進行訓練之效率及準確度較低,因此先將大量的細胞激素數據及血液標記物數據進行生物統計分析,找出具有顯著差異之細胞激素及血液標記物進行機器學習,可大幅提升機器學習的訓練效率以及準確度。Since there are a large number of cytokines and blood markers, the efficiency and accuracy of directly training a large amount of cytokine data and blood marker data by machine learning are low. Therefore, a large amount of cytokine data and blood marker data are first subjected to biostatistical analysis to find out cytokines and blood markers with significant differences for machine learning, which can greatly improve the training efficiency and accuracy of machine learning.
所述生物統計分析係依據輕症(歸類為A類)、中重症(歸類為B類)以及極重症(歸類為C類)進行分類,在大量的細胞激素數據及血液標記物數據中找出具有顯著差異的細胞激素數據及血液標記物數據。The biostatistical analysis is based on classification into mild (classified as Category A), moderate to severe (classified as Category B) and extremely severe (classified as Category C), and cytokine data and blood marker data with significant differences are found out from a large amount of cytokine data and blood marker data.
接著,將具有顯著差異之細胞激素數據及血液標記物數據,以主成分分析(PCA)演算法訓練模型,以獲得登革熱進展評估模型;所述主成分分析能找出數值加權平均後的最大變異數,能從許多相關性較高的變數轉化為彼此獨立的變數,並由其中選取較少且能解釋資料中大部分變異的新變數,也就是所謂的主成份,進而藉由所選之主成分用以解釋分析原始資料的綜合性指標。Then, the cytokine data and blood marker data with significant differences were trained using the principal component analysis (PCA) algorithm to obtain a dengue fever progression assessment model; the principal component analysis can find the maximum variance after weighted averaging of the values, and can transform many highly correlated variables into independent variables, and select fewer new variables that can explain most of the variance in the data, which are the so-called principal components. The selected principal components are then used to explain the comprehensive indicators of the original data.
最後,將待評估之細胞激素數據及血液標記物數據,利用登革熱進展評估模型進行評估,獲得登革熱進展判讀結果;由登革熱進展判讀結果,可得知待評估之登革病患是否會進一步由輕症發展為中重症或極重症,提供醫護人員判斷待評估之登革病患是否需要接受住院治療抑或是僅須居家治療,以減輕醫療系統負擔。Finally, the cytokine data and blood marker data to be evaluated are evaluated using the dengue fever progression assessment model to obtain the dengue fever progression interpretation results; the dengue fever progression interpretation results can tell whether the dengue patients to be evaluated will further develop from mild symptoms to moderate to severe or extremely severe symptoms, and provide medical staff with the ability to judge whether the dengue patients to be evaluated need to be hospitalized or only need home treatment, so as to reduce the burden on the medical system.
根據本發明之另一目的,提出一種登革熱進展評估系統,其包含輸入裝置、儲存裝置、處理器及輸出裝置。其中,輸入裝置用以輸入登革病患之複數個細胞激素數據及複數個血液標記物數據,以及待評估之細胞激素數據及血液標記物數據;儲存裝置連接於輸入裝置,用以儲存複數個細胞激素數據及複數個血液標記物數據,以及待評估之細胞激素數據及血液標記物數據;輸出裝置連接於儲存裝置,用以輸出登革熱進展判讀結果;處理器連接於儲存裝置,執行複數個指令以施行下列步驟:對複數個細胞激素數據及複數個血液標記物數據進行生物統計分析,找出具有顯著差異之細胞激素數據及血液標記物數據;將具有顯著差異之細胞激素數據及血液標記物數據以主成分分析(PCA)演算法進行運算,以建立登革熱進展評估模型;依據登革熱進展評估模型,對待評估之細胞激素數據及血液標記物數據進行判讀程序以獲得登革熱進展判讀結果;藉由輸出裝置存取儲存裝置,將登革熱進展判讀結果輸出。According to another object of the present invention, a dengue fever progression assessment system is provided, which includes an input device, a storage device, a processor, and an output device. The input device is used to input a plurality of cytokine data and a plurality of blood marker data of a dengue patient, as well as the cytokine data and blood marker data to be assessed; the storage device is connected to the input device, and is used to store a plurality of cytokine data and a plurality of blood marker data, as well as the cytokine data and blood marker data to be assessed; the output device is connected to the storage device, and is used to output the dengue fever progression interpretation result; the processor is connected to the storage device, and executes a plurality of instructions to perform the following steps: The method comprises the steps of: performing biostatistical analysis on the cytokine data and a plurality of blood marker data to find out the cytokine data and blood marker data with significant differences; calculating the cytokine data and blood marker data with significant differences using a principal component analysis (PCA) algorithm to establish a dengue fever progression assessment model; performing a judgment procedure on the cytokine data and blood marker data to be assessed based on the dengue fever progression assessment model to obtain a dengue fever progression judgment result; and outputting the dengue fever progression judgment result by accessing a storage device through an output device.
承上所述,使用本發明之登革熱進展評估方法及其系統,藉由細胞激素數據搭配習知用於檢測登革熱之血液標記物,在確診後短期內可快速且準確地判斷登革病患是否會由輕症發展為中重症或極重症,以利後續醫護人員對該名患者是否需住院治療盡快選擇相應之醫療決策,除了提高醫療資源之運用外,並可有效地對可能會發展為中重症或極重症之登革病患進行相應之治療,增加患者之存活率。As mentioned above, the dengue fever progression assessment method and system of the present invention can be used to quickly and accurately determine whether a dengue patient will develop from a mild case to a moderately severe or extremely severe case by combining cytokine data with blood markers known to detect dengue fever in a short period of time after diagnosis, so that subsequent medical staff can quickly choose the corresponding medical decision on whether the patient needs hospitalization. In addition to improving the utilization of medical resources, it can also effectively provide corresponding treatment to dengue patients who may develop into moderately severe or extremely severe cases, thereby increasing the survival rate of patients.
為利貴審查委員瞭解本發明之技術特徵、內容與優點及其所能達成之功效,茲將本發明配合附圖,並以實施例之表達形式詳細說明如下,而其中所使用之圖式,其主旨僅為示意及輔助說明書之用,未必為本發明實施後之真實比例與精準配置,故不應就所附之圖式的比例與配置關係解讀、侷限本發明於實際實施上的權利範圍,合先敘明。In order to help the review committee understand the technical features, contents and advantages of the present invention and the effects that can be achieved, the present invention is described in detail as follows with the accompanying drawings and in the form of embodiments. The drawings used therein are only for illustration and auxiliary description, and may not be the true proportions and precise configurations after the implementation of the present invention. Therefore, it should not be interpreted based on the proportions and configurations of the attached drawings to limit the scope of rights of the present invention in actual implementation.
除非另有定義,本文所使用的所有術語(包括技術和科學術語)具有與本發明所屬技術領域的通常知識者通常理解的含義。將進一步理解的是,諸如在通常使用的字典中定義的那些術語應當被解釋為具有與它們在相關技術和本發明的上下文中的含義一致的含義,並且將不被解釋為理想化的或過度正式的意義,除非本文中明確地如此定義。Unless otherwise defined, all terms (including technical and scientific terms) used herein have the meanings commonly understood by those of ordinary skill in the art to which the present invention belongs. It will be further understood that those terms as defined in commonly used dictionaries should be interpreted as having a meaning consistent with their meanings in the context of the relevant art and the present invention, and will not be interpreted as idealized or overly formal meanings unless expressly so defined herein.
請參閱第1圖,其係為本發明實施例之登革熱進展評估方法的流程圖。如第1圖所示,登革熱進展評估方法包含以下步驟(S1~S4):Please refer to FIG. 1, which is a flow chart of the dengue fever progress assessment method according to an embodiment of the present invention. As shown in FIG. 1, the dengue fever progress assessment method comprises the following steps (S1-S4):
步驟S1:通過輸入裝置輸入登革病患之複數個細胞激素數據及複數個血液標記物數據,儲存於儲存裝置。Step S1: Input a plurality of cytokine data and a plurality of blood marker data of a dengue patient through an input device and store them in a storage device.
通過輸入裝置將能蒐集到的登革病患之細胞激素數據及複數個血液標記物數據輸入至系統的儲存裝置當中,這裡所述的輸入裝置並不侷限於取得細胞激素數據的流式細胞儀以及取得血液標記物數據的血液學分析儀,在醫療院所的資料庫中儲存的細胞激素數據及血液標記物數據,也可通過實體線路、儲存裝置的檔案傳送,或者通過有線或無線網路傳輸將細胞激素數據及血液標記物數據的檔案輸入至系統資料庫當中,作為模型建構的訓練資料。The cytokine data and multiple blood marker data of dengue patients that can be collected are input into the storage device of the system through the input device. The input device described here is not limited to a flow cytometer for obtaining cytokine data and a hematology analyzer for obtaining blood marker data. The cytokine data and blood marker data stored in the database of a medical institution can also be input into the system database through physical lines, files in a storage device, or files of cytokine data and blood marker data can be transmitted through a wired or wireless network to serve as training data for model construction.
其中,所述複數個細胞激素數據以及所述複數個血液標記物數據均係由登革病患之血液檢體中取得,且該等數據均係於該名患者具有輕症臨床表現時(即患者至醫院就醫時採檢),於7天內所取得之血液檢體中檢測而得;因此,每一位登革病患的血液檢體均有複數個細胞激素數據以及複數個血液標記物數據,複數個細胞激素數據具體為24個細胞激素數據(如前述表1所示),而複數個血液標記物數據則分別為白血球細胞數量、血紅蛋白濃度、血比容、血小板數量、丙胺酸轉胺酶濃度以及血清肌酸酐濃度。Among them, the plurality of cytokine data and the plurality of blood marker data are all obtained from blood samples of dengue patients, and the data are all detected from blood samples obtained within 7 days when the patient has mild clinical manifestations (i.e., the patient is tested when visiting the hospital); therefore, the blood sample of each dengue patient has a plurality of cytokine data and a plurality of blood marker data, the plurality of cytokine data are specifically 24 cytokine data (as shown in the aforementioned Table 1), and the plurality of blood marker data are white blood cell count, hemoglobin concentration, hematocrit, platelet count, alanine transaminase concentration and serum creatinine concentration.
步驟S2:藉由處理器存取儲存裝置,對複數個細胞激素數據及複數個血液標記物數據進行生物統計分析,找出具有顯著差異之細胞激素數據及血液標記物數據,接著將具有顯著差異之細胞激素數據及血液標記物數據以主成分分析(PCA)演算法建立登革熱進展評估模型。Step S2: The processor accesses the storage device to perform biostatistical analysis on a plurality of cytokine data and a plurality of blood marker data to find out the cytokine data and blood marker data with significant differences, and then establishes a dengue fever progression assessment model using the principal component analysis (PCA) algorithm for the cytokine data and blood marker data with significant differences.
由於細胞激素以及血液標記物之數量較多,直接以機器學習之方式對大量的細胞激素數據及血液標記物數據進行訓練之效率及準確度較低;因此,先將大量的細胞激素數據及血液標記物數據進行生物統計分析,找出具有顯著差異之細胞激素及血液標記物進行機器學習,可大幅提升機器學習的訓練效率以及準確度。Since there are a large number of cytokines and blood markers, the efficiency and accuracy of directly training a large amount of cytokine data and blood marker data by machine learning are low; therefore, a large amount of cytokine data and blood marker data are first subjected to biostatistical analysis to find out cytokines and blood markers with significant differences for machine learning, which can greatly improve the training efficiency and accuracy of machine learning.
請參閱表2,表2係為不同嚴重程度登革病患之24個細胞激素表達量(濃度,單位為pg/ml),於輕症(A類)、中重症(B類)及極重症(C類)之變化,以及該等細胞激素表達量於輕症發展為中重症或極重症(A至B/C)、輕症發展為中重症(A至B)、輕症發展為極重症(A至C)及中重症發展為極重症(B至C)之變化。該等數據係採用平均值±標準差進行計算,採用Spearman相關法進行數據分析,同時採用Mann Whitney檢驗確定各組之間的差異;其中,n值表登革病患數量,而有效p值為<0.05。Please refer to Table 2, which shows the expression of 24 cytokines (concentration, unit is pg/ml) in patients with different severity of dengue, the changes in mild (category A), moderately severe (category B) and extremely severe (category C), and the changes in the expression of these cytokines in the development of mild to moderately severe or extremely severe (A to B/C), mild to moderately severe (A to B), mild to extremely severe (A to C) and moderately severe to extremely severe (B to C). The data were calculated using mean ± standard deviation, and the Spearman correlation method was used for data analysis. The Mann Whitney test was used to determine the differences between the groups; where n represents the number of dengue patients, and the effective p value is <0.05.
表2
由表2中可看出,不同細胞激素之表達量於輕症、中重症及極重症均有所不同,且隨著輕症發展為中重症或極重症時,部分細胞激素表達量上調抑或是下調。As can be seen from Table 2, the expression levels of different cytokines are different in mild, moderate, severe and extremely severe cases, and as mild cases develop into moderate, severe or extremely severe cases, the expression levels of some cytokines are upregulated or downregulated.
請一併參閱第2圖、第3A圖至第3C圖,第2圖係為不同細胞激素表達量於輕症、中重症及極重症之熱圖(hot map);圖中各細胞激素之濃度均經過正規化並以百分比(%)表示。第3A圖至第3C圖則依序為輕症進展為中重症或極重症時,細胞激素表達量上調、下調及無顯著變化之示意圖;其中第3A圖至第3C圖中,*表示p值<0.05、**表示p值<0.01,以及***表示p值<0.001。Please refer to Figure 2, Figure 3A to Figure 3C. Figure 2 is a hot map of different cytokine expression levels in mild, moderate, severe and extremely severe cases; the concentrations of each cytokine in the figure have been normalized and expressed as a percentage (%). Figures 3A to 3C are schematic diagrams of cytokine expression levels that are upregulated, downregulated, and have no significant changes when mild cases progress to moderate, severe or extremely severe cases, respectively; in Figures 3A to 3C, * indicates p value < 0.05, ** indicates p value < 0.01, and *** indicates p value < 0.001.
由第2圖可看出,不同細胞激素之表達量,於輕症、中重症及極重症均有所不同;舉例而言,IL-18於輕症(A類)時,其表達量相較於未感染登革熱之健康受試者有下調的傾向(綠色部分),而當進展為中重症(B類)或極重症(C類)時,IL-18之表達量則相較於未感染登革熱之健康受試者有上調的傾向(紅色部分)。接著,將不同細胞激素依據表達量上調、下調及無顯著變化進行分類,則依序如第3A圖至第3C圖所示;由該等圖中可看出,IL-18、IL-6、IL-10、IL-1Rα、MIG、IL-15、TNF-α以及IL-8等8個細胞激素之表達量呈現上調,RANTES、IFN-α、IFN-γ、IL-17、IL-7以及MCP-1等6個細胞激素之表達量呈現下調,而MIP-1α、IP-10、VEGF、IL-4、IL-13、GM-CSF、MIP-1β、IL-1β、IL-12以及IL-2等10個細胞激素之表達量則無顯著變化。As can be seen from Figure 2, the expression levels of different cytokines are different in mild, moderate, severe and extremely severe cases. For example, when the disease is mild (category A), the expression level of IL-18 tends to be downregulated compared to healthy subjects who are not infected with dengue fever (green part), while when it progresses to moderate, severe (category B) or extremely severe (category C), the expression level of IL-18 tends to be upregulated compared to healthy subjects who are not infected with dengue fever (red part). Next, different cytokines were classified according to whether their expression levels were up-regulated, down-regulated, or had no significant changes, as shown in Figures 3A to 3C, respectively. It can be seen from these figures that the expression levels of eight cytokines, including IL-18, IL-6, IL-10, IL-1Rα, MIG, IL-15, TNF-α, and IL-8, were up-regulated, the expression levels of six cytokines, including RANTES, IFN-α, IFN-γ, IL-17, IL-7, and MCP-1, were down-regulated, and the expression levels of ten cytokines, including MIP-1α, IP-10, VEGF, IL-4, IL-13, GM-CSF, MIP-1β, IL-1β, IL-12, and IL-2, had no significant changes.
另一方面,請參閱表3,表3係為不同嚴重程度登革病患之血液標記物,於輕症(A類)、中重症(B類)及極重症(C類)之變化。該等數據係採用平均值±標準差進行計算,採用Spearman相關法進行數據分析;其中,n值表登革病患數量,而有效p值為<0.05;由表3中可看出,不同血液標記物於輕症、中重症及極重症之變化均有所不同。On the other hand, please refer to Table 3, which shows the changes of blood markers of dengue patients with different severity in mild (category A), moderately severe (category B) and extremely severe (category C). The data were calculated using mean ± standard deviation, and the Spearman correlation method was used for data analysis; the n value represents the number of dengue patients, and the effective p value is <0.05; it can be seen from Table 3 that the changes of different blood markers in mild, moderately severe and extremely severe cases are different.
表3
由上述細胞激素之表達量變化以及血液標記物之變化可知,不同細胞激素之表達量以及不同血液標記物之變化於輕症、中重症及極重症均有所不同;接著,再進一步以ROC分析法對細胞激素及血液標記物進行分析,依序如表4及表5所示;在表4及表5中,粗體之數值表示經ROC分析後,其所得之曲線下面積(AUC)具有臨床意義,而帶有上箭頭之數值表示其值越高陽性率越高,反之帶有下箭頭之數值表示其值越低陽性率越高。From the above changes in the expression of cytokines and blood markers, it can be seen that the expression of different cytokines and the changes in different blood markers are different in mild, moderate, severe and extremely severe cases; then, the cytokines and blood markers were further analyzed by ROC analysis, as shown in Tables 4 and 5 respectively; in Tables 4 and 5, the values in bold indicate that after ROC analysis, the area under the curve (AUC) obtained has clinical significance, and the values with an upward arrow indicate that the higher the value, the higher the positive rate, and conversely, the values with a downward arrow indicate that the lower the value, the higher the positive rate.
表4
表5
由表4及表5中可看出,經ROC分析後,該等細胞激素中,IFN-⍺、IL-6、IL-7、IL-18及RANTES較具有顯著差異,而該等血液標記物中,血小板、丙胺酸轉胺酶及血清肌酸酐較具有顯著差異;因此,將該等較具有顯著差異之5個細胞激素及3個血液標記物之數據,作為後續主成分分析(PCA)演算法之參數,用以建立登革熱進展評估模型。It can be seen from Tables 4 and 5 that after ROC analysis, among the cytokines, IFN-⍺, IL-6, IL-7, IL-18 and RANTES have significant differences, and among the blood markers, platelets, alanine aminotransferase and serum creatinine have significant differences; therefore, the data of the 5 cytokines and 3 blood markers with significant differences were used as parameters of the subsequent principal component analysis (PCA) algorithm to establish a dengue fever progression assessment model.
接著,由上述較具有顯著差異之5個細胞激素及3個血液標記物之數據中,以其於輕症(A類)、中重症(B類)及極重症(C類)之顯著變化,個別挑選出3個數據、4個數據以及全部8個數據,依序作為主成分分析演算法之參數,建立登革熱進展評估模型;其挑選出於不同嚴重程度之病症下所用之參數種類如表6所示。Next, from the data of the above-mentioned 5 cytokines and 3 blood markers with significant differences, 3 data, 4 data, and all 8 data were selected individually based on their significant changes in mild (category A), moderate to severe (category B), and extremely severe (category C) cases, and used as parameters of the principal component analysis algorithm in sequence to establish a dengue fever progression assessment model; the types of parameters selected for different severity of the disease are shown in Table 6.
表6
步驟S3:通過輸入裝置取得待評估之細胞激素數據及血液標記物數據,以處理器進行判讀程序獲得登革熱進展判讀結果。Step S3: Obtain the cytokine data and blood marker data to be evaluated through the input device, and use the processor to perform an interpretation process to obtain the dengue fever progression interpretation result.
藉由上述步驟S2,依據不同具有顯著差異表達之細胞激素,搭配具有顯著差異表達之血液標記物作為參數(請參閱表6),經主成分分析演算法所建立之登革熱進展評估模型,將待評估之細胞激素數據及血液標記物數據利用該模型進行評估,獲得登革熱進展判讀結果,其結果如表7所示。Through the above step S2, according to different cytokines with significant differential expression, combined with blood markers with significant differential expression as parameters (see Table 6), a dengue fever progression evaluation model is established by the principal component analysis algorithm. The cytokine data and blood marker data to be evaluated are evaluated using the model to obtain the dengue fever progression interpretation results, and the results are shown in Table 7.
表7
由表7之結果中可得知,於輕症發展為中重症或極重症(A至B/C)、輕症發展為中重症(A至B)、輕症發展為極重症(A至C)之預測準確率,均係為使用8個參數的情況下預測準確率最高,依序為89.7%、84.2%以及89.8%,均高達八成以上準確率;而中重症發展為極重症(B至C)之預測率,則係為使用4個參數的情況下預測準確率最高,其預測準確率為79.6%,也有近八成的準確率。From the results in Table 7, it can be seen that the prediction accuracy of mild cases developing into moderate or severe cases or extremely severe cases (A to B/C), mild cases developing into moderate or severe cases (A to B), and mild cases developing into extremely severe cases (A to C) are all the highest when using 8 parameters, which are 89.7%, 84.2% and 89.8% respectively, all of which are more than 80% accurate; and the prediction rate of moderate and severe cases developing into extremely severe cases (B to C) is the highest when using 4 parameters, with a prediction accuracy of 79.6%, which is also nearly 80% accurate.
因此,當欲預測登革病患是否由輕症發展為中重症或極重症、輕症發展為中重症,或輕症發展為極重症時,則以血小板、丙胺酸轉胺酶、血清肌酸酐等3個血液標記物,以及IFN-⍺、IL-6、IL-7、IL-18、RANTES等5個細胞激素作為參數,建立登革熱進展評估模型進行預測;如欲預測登革病患是否由中重症發展為極重症時,則以丙胺酸轉胺酶、血清肌酸酐等2個血液標記物,以及IL-6、RANTES等2個細胞激素作為參數,建立登革熱進展評估模型進行預測。Therefore, when it is desired to predict whether a dengue patient will develop from a mild case to a moderate or severe case or an extremely severe case, a mild case to a moderate or severe case, or a mild case to an extremely severe case, three blood markers, namely platelets, alanine aminotransferase, and serum creatinine, and five cytokines, namely IFN-⍺, IL-6, IL-7, IL-18, and RANTES, are used as parameters to establish a dengue fever progression assessment model for prediction; if it is desired to predict whether a dengue patient will develop from a moderate or severe case to an extremely severe case, two blood markers, namely alanine aminotransferase and serum creatinine, and two cytokines, namely IL-6 and RANTES, are used as parameters to establish a dengue fever progression assessment model for prediction.
步驟S4:藉由輸出裝置存取儲存裝置,將登革熱進展判讀結果輸出。Step S4: The dengue fever progression interpretation result is outputted by accessing the storage device through the output device.
經過上述步驟S3獲得之登革熱進展判讀結果,可進一步通過輸出裝置將其輸出。本實施例所揭露的輸出裝置可包含各種顯示介面,例如電腦螢幕、顯示器或手持裝置顯示器等。The dengue fever progression judgment result obtained in step S3 can be further outputted through an output device. The output device disclosed in this embodiment can include various display interfaces, such as a computer screen, a display, or a handheld device display.
最後,請參閱第4圖,其係為本發明實施例之登革熱進展評估系統的示意圖。如第4圖所示,登革熱進展評估系統20可包含輸入裝置21、儲存裝置22、處理器23及輸出裝置24。Finally, please refer to FIG. 4 , which is a schematic diagram of a dengue fever progress assessment system according to an embodiment of the present invention. As shown in FIG. 4 , the dengue fever progress assessment system 20 may include an input device 21 , a storage device 22 , a processor 23 and an output device 24 .
在本實施例中,輸入裝置21可為取得細胞激素數據的流式細胞儀以及取得血液標記物數據的血液學分析儀,該等數據均係由患者之血液檢體中取得。在另一實施例中,輸入裝置21不限於流式細胞儀及血液學分析儀,輸入裝置21可包含個人電腦、智慧型手機、伺服器等電子裝置的輸入界面,包含觸控螢幕、鍵盤、滑鼠等,透過檔案方式傳送細胞激素數據及血液標記物數據;抑或是將歷史資料透過無線網路傳輸、無線通訊傳輸或一般有線網際網路上傳到儲存裝置22當中的記憶體儲存,記憶體可包含唯讀記憶體、快閃記憶體、磁碟或是雲端資料庫等。In this embodiment, the input device 21 can be a flow cytometer for obtaining cytokine data and a hematology analyzer for obtaining blood marker data, both of which are obtained from a patient's blood sample. In another embodiment, the input device 21 is not limited to flow cytometers and hematology analyzers. The input device 21 may include input interfaces of electronic devices such as personal computers, smart phones, servers, etc., including touch screens, keyboards, mice, etc., to transmit cytokine data and blood marker data in file form; or upload historical data to the memory storage in the storage device 22 via wireless network transmission, wireless communication transmission or general wired Internet. The memory may include read-only memory, flash memory, disk or cloud database, etc.
其次,登革熱進展評估系統20通過處理器23來存取儲存裝置22,處理器23可包含電腦或伺服器當中的中央處理器、圖像處理器、微處理器等,其可包含多核心的處理單元或者是多個處理單元的組合。處理器23執行指令來存取儲存裝置22中的登革病患之複數個細胞激素數據及複數個血液標記物數據進行訓練程序,並存取待評估之細胞激素數據及血液標記物數據來進行判讀程序。詳細來說,訓練程序是將原本儲存裝置22當中的登革病患之複數個細胞激素數據及複數個血液標記物數據,對該等數據進行生物統計分析,找出具有顯著差異之細胞激素數據及血液標記物數據,將具有顯著差異之細胞激素數據及血液標記物數據,以主成分分析(PCA)演算法進行運算,以建立登革熱進展評估模型。Secondly, the dengue fever progress assessment system 20 accesses the storage device 22 through the processor 23. The processor 23 may include a central processing unit, an image processor, a microprocessor, etc. in a computer or server, and may include a multi-core processing unit or a combination of multiple processing units. The processor 23 executes instructions to access multiple cytokine data and multiple blood marker data of dengue patients in the storage device 22 for training procedures, and accesses the cytokine data and blood marker data to be evaluated for interpretation procedures. Specifically, the training procedure is to perform biostatistical analysis on a plurality of cytokine data and a plurality of blood marker data of dengue patients originally stored in the storage device 22, find out the cytokine data and blood marker data with significant differences, and calculate the cytokine data and blood marker data with significant differences using the principal component analysis (PCA) algorithm to establish a dengue fever progression assessment model.
接著,待評估之細胞激素數據及血液標記物數據藉由判讀程序,通過所建立之登革熱進展評估模型進行演算後,依據登革熱症狀進展之嚴重程度,歸類為輕症發展為中重症或極重症(A至B/C)、輕症發展為中重症(A至B)、輕症發展為極重症(A至C),以及中重症發展為極重症(B至C)等四種狀況中的其中一者,獲得登革熱進展判讀結果;輸出裝置24存取儲存裝置22將登革熱進展判讀結果輸出,輸出裝置24可包含各種顯示介面,例如電腦螢幕、顯示器或手持裝置顯示器等。Next, the cytokine data and blood marker data to be evaluated are calculated through the established dengue fever progression evaluation model through the interpretation procedure, and are classified into one of the four conditions: mild symptoms develop into moderately severe or extremely severe symptoms (A to B/C), mild symptoms develop into moderately severe symptoms (A to B), mild symptoms develop into extremely severe symptoms (A to C), and moderately severe symptoms develop into extremely severe symptoms (B to C) according to the severity of the progression of dengue fever symptoms, thereby obtaining the dengue fever progression interpretation result; the output device 24 accesses the storage device 22 to output the dengue fever progression interpretation result, and the output device 24 may include various display interfaces, such as a computer screen, a display, or a handheld device display.
經由上述登革熱進展評估方法及其系統,藉由細胞激素數據搭配習知用於檢測登革熱之血液標記物,可快速且準確地判斷登革病患是否會由輕症發展為中重症或極重症,其評估準確率可達近8成以上,以利後續醫護人員對該名患者是否需住院治療盡快選擇相應之醫療決策,除了提高醫療資源之運用外,並可有效地對可能會發展為中重症或極重症之登革病患進行相應之治療,增加患者之存活率。Through the above-mentioned dengue fever progression assessment method and system, by combining cytokine data with blood markers known to be used for detecting dengue fever, it is possible to quickly and accurately determine whether a dengue patient will develop from a mild case to a moderately severe or extremely severe case. The assessment accuracy rate can reach nearly 80%, so that subsequent medical staff can quickly choose the corresponding medical decision on whether the patient needs hospitalization. In addition to improving the utilization of medical resources, it can also effectively provide corresponding treatment to dengue patients who may develop into moderately severe or extremely severe cases, thereby increasing the survival rate of patients.
以上所述僅為舉例性,而非為限制性者。任何未脫離本發明之精神與範疇,而對其進行之等效修改或變更,均應包含於後附之申請專利範圍中。The above description is for illustrative purposes only and is not intended to be limiting. Any equivalent modifications or changes made to the invention without departing from the spirit and scope of the invention shall be included in the scope of the attached patent application.
20:登革熱進展評估系統 21:輸入裝置 22:儲存裝置 23:處理器 24:輸出裝置 S1~S4:步驟 20: Dengue fever progress assessment system 21: Input device 22: Storage device 23: Processor 24: Output device S1~S4: Steps
為使本發明之技術特徵、內容與優點及其所能達成之功效更為顯而易見,茲將本發明配合附圖,並以實施例之表達形式詳細說明如下:In order to make the technical features, contents and advantages of the present invention and the effects that can be achieved more obvious, the present invention is described in detail as follows with reference to the accompanying drawings and in the form of embodiments:
第1圖係為本發明實施例之登革熱進展評估方法的流程圖; 第2圖係為本發明實施例之不同細胞激素表達量於輕症、中重症及極重症之熱圖(hot map); 第3A圖、第3B圖及第3C圖依序係為本發明實施例之輕症進展為中重症或極重症時,細胞激素表達量上調、下調及無顯著變化之示意圖; 第4圖係為本發明實施例之登革熱進展評估系統的示意圖。 Figure 1 is a flow chart of the dengue fever progression assessment method of the present invention; Figure 2 is a heat map of different cytokine expression levels in mild, moderate, severe and extremely severe cases of the present invention; Figures 3A, 3B and 3C are schematic diagrams of the upregulation, downregulation and no significant change of cytokine expression levels when the mild case progresses to moderate, severe or extremely severe cases of the present invention; Figure 4 is a schematic diagram of the dengue fever progression assessment system of the present invention.
S1~S4:步驟 S1~S4: Steps
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