DK1654388T3 - Fremgangsmåde til påvisning af cytosinmethyleringer i DNA - Google Patents
Fremgangsmåde til påvisning af cytosinmethyleringer i DNAInfo
- Publication number
- DK1654388T3 DK1654388T3 DK04816095T DK04816095T DK1654388T3 DK 1654388 T3 DK1654388 T3 DK 1654388T3 DK 04816095 T DK04816095 T DK 04816095T DK 04816095 T DK04816095 T DK 04816095T DK 1654388 T3 DK1654388 T3 DK 1654388T3
- Authority
- DK
- Denmark
- Prior art keywords
- dna
- base
- probe
- hybridization
- detecting
- Prior art date
Links
- 230000030933 DNA methylation on cytosine Effects 0.000 title abstract 3
- 238000000034 method Methods 0.000 title 1
- LRSASMSXMSNRBT-UHFFFAOYSA-N 5-methylcytosine Chemical compound CC1=CNC(=O)N=C1N LRSASMSXMSNRBT-UHFFFAOYSA-N 0.000 abstract 4
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical compound O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 abstract 4
- 238000009396 hybridization Methods 0.000 abstract 3
- 239000000523 sample Substances 0.000 abstract 3
- 102000004190 Enzymes Human genes 0.000 abstract 2
- 108090000790 Enzymes Proteins 0.000 abstract 2
- OPTASPLRGRRNAP-UHFFFAOYSA-N cytosine Chemical class NC=1C=CNC(=O)N=1 OPTASPLRGRRNAP-UHFFFAOYSA-N 0.000 abstract 2
- 239000000126 substance Substances 0.000 abstract 2
- 229940035893 uracil Drugs 0.000 abstract 2
- 241000239226 Scorpiones Species 0.000 abstract 1
- 239000003153 chemical reaction reagent Substances 0.000 abstract 1
- 230000001419 dependent effect Effects 0.000 abstract 1
- 230000003834 intracellular effect Effects 0.000 abstract 1
- 239000011159 matrix material Substances 0.000 abstract 1
- 230000011987 methylation Effects 0.000 abstract 1
- 238000007069 methylation reaction Methods 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/106—Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/154—Methylation markers
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Immunology (AREA)
- Pathology (AREA)
- Analytical Chemistry (AREA)
- Zoology (AREA)
- Genetics & Genomics (AREA)
- Wood Science & Technology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Hospice & Palliative Care (AREA)
- Biophysics (AREA)
- Oncology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE10338308A DE10338308B4 (de) | 2003-08-15 | 2003-08-15 | Verfahren zum Nachweis von Cytosin-Methylierungen in DNA |
| PCT/DE2004/001837 WO2005024056A2 (de) | 2003-08-15 | 2004-08-13 | Verfahren zum nachweis von cytosinmethylierungen in dna unter verwendung von scorpion-primern |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DK1654388T3 true DK1654388T3 (da) | 2007-10-29 |
Family
ID=34201746
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK04816095T DK1654388T3 (da) | 2003-08-15 | 2004-08-13 | Fremgangsmåde til påvisning af cytosinmethyleringer i DNA |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US9863001B2 (da) |
| EP (2) | EP1654388B1 (da) |
| JP (1) | JP4743787B2 (da) |
| AT (1) | ATE365813T1 (da) |
| CA (1) | CA2540378A1 (da) |
| DE (2) | DE10338308B4 (da) |
| DK (1) | DK1654388T3 (da) |
| ES (1) | ES2289594T3 (da) |
| WO (1) | WO2005024056A2 (da) |
Families Citing this family (21)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2481810A1 (en) | 2005-04-15 | 2012-08-01 | Epigenomics AG | A method for providing DNA fragments derived from a remote sample |
| RU2008148143A (ru) * | 2006-06-08 | 2010-06-10 | Конинклейке Филипс Электроникс Н.В. (Nl) | Микроэлектронное сенсорное устройство для детектирования днк |
| JP2008136404A (ja) * | 2006-11-30 | 2008-06-19 | Sysmex Corp | Ｄｎａメチル化検出における非メチル化シトシン変換処理後のｄｎａ量の確認方法 |
| US20090203011A1 (en) * | 2007-01-19 | 2009-08-13 | Epigenomics Ag | Methods and nucleic acids for analyses of cell proliferative disorders |
| WO2008149237A2 (en) | 2007-06-08 | 2008-12-11 | Epigenomics Ag | Method for methylation analysis |
| US9050280B2 (en) * | 2007-09-17 | 2015-06-09 | Mdxhealth Sa | Methylation detection of MGMT |
| EP2229456A2 (en) | 2007-12-11 | 2010-09-22 | Epigenomics AG | Methods and nucleic acids for analyses of cell proliferative disorders |
| EP2071035A1 (en) * | 2007-12-13 | 2009-06-17 | Epigenomics AG | Facilitator and method for amplification |
| FR2940805B1 (fr) | 2009-01-05 | 2015-10-16 | Biomerieux Sa | Procede d'amplification et/ou de detection d'acides nucleiques, kits et utilisations de ce procede |
| ATE513930T1 (de) * | 2009-01-22 | 2011-07-15 | Univ Duesseldorf H Heine | Bestimmung des dna-methylierungsgrads |
| US20110117546A1 (en) * | 2009-11-18 | 2011-05-19 | Microfluidic Systems, Inc. | Increase of signal sensitivity using dual probes in pcr reactions |
| CA2858144C (en) * | 2011-12-06 | 2021-05-04 | Mdxhealth Sa | Methods of detecting mutations and epigenetic changes |
| CN108588177B (zh) * | 2013-08-12 | 2022-02-18 | 伯乐生命医学产品有限公司 | 具有碱基配对的寡聚体的扩增报告子 |
| GB201402644D0 (en) * | 2014-02-14 | 2014-04-02 | Base4 Innovation Ltd | Methylation detection method |
| EP4528275A3 (en) | 2016-08-10 | 2025-05-14 | Grail, Inc. | Methods of preparing dual-indexed dna libraries for bisulfite conversion sequencing |
| CN108456721B (zh) * | 2018-05-16 | 2021-07-09 | 基因科技（上海）股份有限公司 | 同步检测基因突变和甲基化的方法及其应用 |
| US11427874B1 (en) | 2019-08-26 | 2022-08-30 | Epi One Inc. | Methods and systems for detection of prostate cancer by DNA methylation analysis |
| WO2021192395A1 (ja) | 2020-03-25 | 2021-09-30 | 富士フイルム株式会社 | 塩基のメチル化度の算出方法及びプログラム |
| JP2024526281A (ja) * | 2021-07-02 | 2024-07-17 | エンツォ バイオケム、インコーポレイテッド | Ｄｎａの選択された遺伝子座又は領域におけるｄｎａのメチル化を検出及び定量するための方法 |
| CN113552191B (zh) * | 2021-07-28 | 2023-11-21 | 江苏师范大学 | 基于多层dna放大回路检测甲基化dna的比例型电化学传感器的构建方法 |
| CN114317761A (zh) * | 2022-02-23 | 2022-04-12 | 厦门飞朔生物技术有限公司 | 一种宫颈癌相关基因甲基化检测方法 |
Family Cites Families (20)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB8920097D0 (en) | 1989-09-06 | 1989-10-18 | Ici Plc | Amplification processes |
| US5786146A (en) | 1996-06-03 | 1998-07-28 | The Johns Hopkins University School Of Medicine | Method of detection of methylated nucleic acid using agents which modify unmethylated cytosine and distinguishing modified methylated and non-methylated nucleic acids |
| US6017704A (en) | 1996-06-03 | 2000-01-25 | The Johns Hopkins University School Of Medicine | Method of detection of methylated nucleic acid using agents which modify unmethylated cytosine and distinguishing modified methylated and non-methylated nucleic acids |
| US6117635A (en) * | 1996-07-16 | 2000-09-12 | Intergen Company | Nucleic acid amplification oligonucleotides with molecular energy transfer labels and methods based thereon |
| GB9812768D0 (en) * | 1998-06-13 | 1998-08-12 | Zeneca Ltd | Methods |
| AUPP844899A0 (en) * | 1999-02-01 | 1999-02-25 | University Of Western Australia, The | A method for detecting methylated nucleic acids |
| US6331393B1 (en) | 1999-05-14 | 2001-12-18 | University Of Southern California | Process for high-throughput DNA methylation analysis |
| US6277607B1 (en) * | 1999-05-24 | 2001-08-21 | Sanjay Tyagi | High specificity primers, amplification methods and kits |
| DE19951189C2 (de) * | 1999-10-15 | 2003-11-06 | Epigenomics Ag | Verfahren zur Unterscheidung von 5-Position-Methylierungsänderungen von Cytosin-Basen und Cytosin-zu-Thymin-Mutationen und zum Nachweis von single nucleotide polymorphisms (SNPs) oder Punktmutation in genomischer DNA |
| AU2001254794A1 (en) | 2000-04-06 | 2001-10-23 | Epigenomics Ag | Diagnosis of diseases associated with dna adducts |
| DE10029915B4 (de) | 2000-06-19 | 2005-06-16 | Epigenomics Ag | Verfahren zum Nachweis von Cytosin-Methylierungen |
| DE10112515B4 (de) | 2001-03-09 | 2004-02-12 | Epigenomics Ag | Verfahren zum Nachweis von Cytosin-Methylierungsmustern mit hoher Sensitivität |
| JP2004533256A (ja) * | 2001-06-14 | 2004-11-04 | ユニバーシティ オブ ウェールズ カレッジ オブ メディスン | ウイルス検出方法、ウイルス検出用プライマー、及びスクリーニングキット |
| DE10132212B4 (de) * | 2001-06-27 | 2005-11-24 | Epigenomics Ag | Verfahren zum Nachweis von Cytosin-Methylierung durch vergleichende Analyse der Einzelstränge von Amplifikaten |
| DE10154317B4 (de) | 2001-10-26 | 2005-06-09 | Epigenomics Ag | Verfahren zum Nachweis von Cytosin-Methylierungen in immobilisierten DNA Proben |
| JP2007501002A (ja) * | 2003-08-01 | 2007-01-25 | ザ ユニバーシティ オブ ウェスタン オーストラリア | 癌治療の成功の可能性を予測するための方法及びキット |
| US20060183128A1 (en) * | 2003-08-12 | 2006-08-17 | Epigenomics Ag | Methods and compositions for differentiating tissues for cell types using epigenetic markers |
| US20050287553A1 (en) | 2004-04-06 | 2005-12-29 | Epigenomics Ag | Method for the quantification of methylated DNA |
| EP1794319B1 (en) | 2004-09-30 | 2014-08-13 | Epigenomics AG | Method for providing dna fragments derived from an archived sample |
| ES2546848T3 (es) * | 2006-03-10 | 2015-09-29 | Epigenomics Ag | Un método para identificar una muestra biológica para el análisis de la metilación |
-
2003
- 2003-08-15 DE DE10338308A patent/DE10338308B4/de not_active Expired - Fee Related
-
2004
- 2004-08-13 EP EP04816095A patent/EP1654388B1/de not_active Expired - Lifetime
- 2004-08-13 WO PCT/DE2004/001837 patent/WO2005024056A2/de not_active Ceased
- 2004-08-13 DK DK04816095T patent/DK1654388T3/da active
- 2004-08-13 US US10/568,300 patent/US9863001B2/en active Active
- 2004-08-13 EP EP07110306A patent/EP1835037A1/de not_active Withdrawn
- 2004-08-13 CA CA002540378A patent/CA2540378A1/en not_active Abandoned
- 2004-08-13 DE DE502004004202T patent/DE502004004202D1/de not_active Expired - Lifetime
- 2004-08-13 AT AT04816095T patent/ATE365813T1/de active
- 2004-08-13 ES ES04816095T patent/ES2289594T3/es not_active Expired - Lifetime
- 2004-08-13 JP JP2006523519A patent/JP4743787B2/ja not_active Expired - Fee Related
Also Published As
| Publication number | Publication date |
|---|---|
| WO2005024056A3 (de) | 2005-06-02 |
| EP1654388B1 (de) | 2007-06-27 |
| US20060194208A1 (en) | 2006-08-31 |
| EP1835037A1 (de) | 2007-09-19 |
| DE10338308B4 (de) | 2006-10-19 |
| JP2007502126A (ja) | 2007-02-08 |
| CA2540378A1 (en) | 2005-03-17 |
| JP4743787B2 (ja) | 2011-08-10 |
| EP1654388A2 (de) | 2006-05-10 |
| ES2289594T3 (es) | 2008-02-01 |
| ATE365813T1 (de) | 2007-07-15 |
| US9863001B2 (en) | 2018-01-09 |
| DE502004004202D1 (de) | 2007-08-09 |
| WO2005024056A2 (de) | 2005-03-17 |
| DE10338308A1 (de) | 2005-03-24 |
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