AR014162A1 - Un metodo para identificar los loci de rasgos cuantitativos en una poblacion de plantas definida, combinada, que comprende una multiplicidad defamilias de plantas, un metodo para seleccionar plantas con un fenotipo deseado , una planta asi seleccionada, un metodo para fabricar una planta transgenica - Google Patents
Un metodo para identificar los loci de rasgos cuantitativos en una poblacion de plantas definida, combinada, que comprende una multiplicidad defamilias de plantas, un metodo para seleccionar plantas con un fenotipo deseado , una planta asi seleccionada, un metodo para fabricar una planta transgenicaInfo
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- AR014162A1 AR014162A1 ARP980106646A ARP980106646A AR014162A1 AR 014162 A1 AR014162 A1 AR 014162A1 AR P980106646 A ARP980106646 A AR P980106646A AR P980106646 A ARP980106646 A AR P980106646A AR 014162 A1 AR014162 A1 AR 014162A1
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- 238000000034 method Methods 0.000 title abstract 4
- 230000002068 genetic effect Effects 0.000 abstract 5
- 238000013179 statistical model Methods 0.000 abstract 3
- 230000000694 effects Effects 0.000 abstract 2
- 239000003550 marker Substances 0.000 abstract 2
- 108700028369 Alleles Proteins 0.000 abstract 1
- 241000238631 Hexapoda Species 0.000 abstract 1
- 108010044467 Isoenzymes Proteins 0.000 abstract 1
- 239000011324 bead Substances 0.000 abstract 1
- 230000002301 combined effect Effects 0.000 abstract 1
- 201000010099 disease Diseases 0.000 abstract 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 abstract 1
- 239000012634 fragment Substances 0.000 abstract 1
- 230000036571 hydration Effects 0.000 abstract 1
- 238000006703 hydration reaction Methods 0.000 abstract 1
- 230000010076 replication Effects 0.000 abstract 1
- 238000007894 restriction fragment length polymorphism technique Methods 0.000 abstract 1
Classifications
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01H—NEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
- A01H1/00—Processes for modifying genotypes ; Plants characterised by associated natural traits
- A01H1/04—Processes of selection involving genotypic or phenotypic markers; Methods of using phenotypic markers for selection
- A01H1/045—Processes of selection involving genotypic or phenotypic markers; Methods of using phenotypic markers for selection using molecular markers
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/40—Population genetics; Linkage disequilibrium
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
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- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Organic Chemistry (AREA)
- Physics & Mathematics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biotechnology (AREA)
- Analytical Chemistry (AREA)
- Molecular Biology (AREA)
- Zoology (AREA)
- General Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Biophysics (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Biochemistry (AREA)
- Immunology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Botany (AREA)
- Evolutionary Biology (AREA)
- Biomedical Technology (AREA)
- Theoretical Computer Science (AREA)
- Medical Informatics (AREA)
- Physiology (AREA)
- Plant Pathology (AREA)
- Cell Biology (AREA)
- Ecology (AREA)
- Environmental Sciences (AREA)
- Mycology (AREA)
- Developmental Biology & Embryology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
Abstract
Se proporciona un método para identificar los loci de rasgos cuantitativos (QTL) en una poblacion de plantas definida, combinada, que comprende unamultiplicidad de familias de plantas, comprendiendo el método: 1) cuantificar un rasgo fenotípico enlas líneas tomadas como muestras de la poblacioncombinada, proporcionando de este modo un fenotipo de poblacion cuantificado; ii) identificar por lo menos un marcador genético asociado con la distribucionde un rasgo fenotípico, realizando un rastreo de un grupo de marcadores para las asociaciones con el fenotipo de la poblacion cuantificada; y iii)identificar los loci de rasgos cunatificativos sobre la base de la asociacion del rasgo fenotípico y el marcador genético. En una forma de realizacion, lapoblacion de plantas consiste en plantas diploides, ya sea híbridas o endogamas. Los rasgos fenotípicos preferidos incluyen aunque no se limitan alos mismos; el rinde de los granos, el contenido de humedad de los granos, el contenido de aceite de los granos, el vuelco de las raíces, el vuelco de lostallos, la altura de la planta, la altura de la espiga, la resistencia a las enfermedades y la resistencia a los insectos. En una forma de realizacionpreferida, los marcadores genéticos asociados con los QTL son: los polimorfismos de longitud del fragmento de restriccion, los marcadores de isozimas, lahidridacion específica de los alelos, las secuencias variables amplificadas del genoma vegetal, la replicacion de secuencia autosostenida, las repeticiones desecuencia simple y los polimorfos de longitud del fragmento arbitrario. En otra forma de realizacion que se prefiere, por lo menos dos marcadores genéticosestán asociados con los QTL y se identifican por una criba enmasa. La asociacion de los loci genéticos y el rasgo fenotípico se determina a través de modelosestadísticos específicos. En una forma de realizacion preferida, los modelos estadísticos son modelos lineales, con efectos fijos y efectos aelatorios. Enuna forma de realizacion particularmente preferida, el modelo estadístico es un modelo con efectos combinados, donde el rasgo fenotípico de la progenie de una
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US6882297P | 1997-12-22 | 1997-12-22 | |
| US8404898P | 1998-05-04 | 1998-05-04 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AR014162A1 true AR014162A1 (es) | 2001-02-07 |
Family
ID=26749422
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ARP980106646A AR014162A1 (es) | 1997-12-22 | 1998-12-23 | Un metodo para identificar los loci de rasgos cuantitativos en una poblacion de plantas definida, combinada, que comprende una multiplicidad defamilias de plantas, un metodo para seleccionar plantas con un fenotipo deseado , una planta asi seleccionada, un metodo para fabricar una planta transgenica |
Country Status (6)
| Country | Link |
|---|---|
| US (1) | US6399855B1 (es) |
| EP (1) | EP1042507B1 (es) |
| AR (1) | AR014162A1 (es) |
| AU (1) | AU1927599A (es) |
| DE (1) | DE69839350T2 (es) |
| WO (1) | WO1999032661A1 (es) |
Families Citing this family (51)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP1230385A4 (en) * | 1999-10-08 | 2004-12-08 | Pioneer Hi Bred Int | IDENTIFICATION ASSISTED BY A MARKER OF A GENE ASSOCIATED WITH A PHENOTYPIC TRAIT |
| WO2001049104A2 (en) * | 1999-12-30 | 2001-07-12 | Pioneer Hi-Bred International, Inc. | Mqm mapping using haplotyped putative qtl-alleles: a simple approach for mapping qtl's in plant breeding populations |
| FR2804970B1 (fr) * | 2000-01-28 | 2004-06-25 | Biogemma Fr | Identification de genes associes a un locus qtl de digestibilite du mais |
| AU2001245963A1 (en) * | 2000-03-24 | 2001-10-08 | Pioneer Hi-Bred International, Inc. | Methods of selection and development of plants having improved root quality and root lodging resistance |
| US6865556B2 (en) * | 2001-02-09 | 2005-03-08 | Monsanto Technology Llc | Identification of seeds or plants using phenotypic markers |
| WO2002099385A2 (en) * | 2001-06-07 | 2002-12-12 | Pionneer Hi-Bred International, Inc. | Qtl controlling sclerotinia stem rot resistance in soybean |
| ATE461617T1 (de) | 2002-06-06 | 2010-04-15 | Monsanto Technology Llc | Verfahren und zusammensetzungen für die herstellung von mais mit erhöhter transformierbarkeit |
| WO2004054351A2 (en) * | 2002-12-18 | 2004-07-01 | Agrinomics Llc | Generation of plants with altered oil content |
| ZA200506094B (en) | 2002-12-31 | 2006-11-29 | Mmi Genomics Inc | Compositions, methods and systems for inferring bovine traits |
| US20070105103A1 (en) * | 2003-05-01 | 2007-05-10 | Kazuyoshi Takeda | Array having substances fixed on support arranged with chromosomal order or sequence position information added thereto, process for producing the same, analytical system using the array and use of these |
| WO2005000006A2 (en) * | 2003-05-28 | 2005-01-06 | Pioneer Hi-Bred International, Inc. | Plant breeding method |
| CA2531119A1 (en) * | 2003-07-07 | 2005-02-17 | Pioneer Hi-Bred International, Inc. | Qtl "mapping as-you-go" |
| IL180275A0 (en) | 2004-07-02 | 2007-07-04 | Seminis Vegetable Seeds Inc | Watermelon with improved processing qualities |
| US9173356B2 (en) | 2004-07-02 | 2015-11-03 | Seminis Vegetable Seeds, Inc. | Watermelon with improved processing qualities |
| US7595432B2 (en) * | 2004-11-17 | 2009-09-29 | Pioneer Hi-Bred International, Inc. | Genetic loci associated with Sclerotinia tolerance in soybean |
| JP5238264B2 (ja) * | 2005-03-03 | 2013-07-17 | ライク・ズワーン・ザードテールト・アン・ザードハンデル・ベスローテン・フェンノートシャップ | 近逆育種方法および生物 |
| JP5818398B2 (ja) * | 2005-03-03 | 2015-11-18 | ライク・ズワーン・ザードテールト・アン・ザードハンデル・ベスローテン・フェンノートシャップ | 逆子孫マッピング方法 |
| US7401528B2 (en) | 2006-06-22 | 2008-07-22 | Monsanto Technology Llc | Apparatus and methods for evaluating plant stalk strength |
| US20080083042A1 (en) * | 2006-08-14 | 2008-04-03 | David Butruille | Maize polymorphisms and methods of genotyping |
| AR063688A1 (es) | 2006-08-15 | 2009-02-11 | Monsanto Technology Llc | Composiciones y metodos para la produccion de plantas utilizando la informacion de marcador de alta densidad |
| WO2008087185A1 (en) | 2007-01-17 | 2008-07-24 | Syngenta Participations Ag | Process for selecting individuals and designing a breeding program |
| EP1947198A1 (en) * | 2007-01-18 | 2008-07-23 | Syngeta Participations AG | Maize plants characterised by quantitative trait loci (QTL) |
| BRPI0812335A2 (pt) * | 2007-05-17 | 2015-01-27 | Monsanto Technology Llc | Polimorfismos de milho e métodos de genotipagem. |
| AR066922A1 (es) | 2007-06-08 | 2009-09-23 | Monsanto Technology Llc | Metodos de mejoramiento molecular del germoplasma de una planta por secuenciamiento dirigido |
| AR067114A1 (es) * | 2007-06-22 | 2009-09-30 | Monsanto Technology Llc | Metodos y composiciones para seleccionar loci en base al rendimiento y la exresion de caracteristicas |
| AR071243A1 (es) | 2007-08-29 | 2010-06-09 | Monsanto Technology Llc | Metodos y composiciones para usar plantas haploides en el mapeo genetico de caracteristicas, como resistencia a enfermedades |
| JP2011509663A (ja) * | 2008-01-18 | 2011-03-31 | シンジェンタ・パティシペーションズ・アクチェンゲゼルシャフト | 量的形質遺伝子座により特徴付けられたトウモロコシ植物 |
| AU2009259882A1 (en) * | 2008-06-20 | 2009-12-23 | University Of Georgia Research Foundation, Inc. | Development of herbicide-resistant grass species |
| US20110214196A1 (en) * | 2008-06-20 | 2011-09-01 | University Of Georgia Research Foundation | Development of herbicide-resistant grass species |
| US8321147B2 (en) * | 2008-10-02 | 2012-11-27 | Pioneer Hi-Bred International, Inc | Statistical approach for optimal use of genetic information collected on historical pedigrees, genotyped with dense marker maps, into routine pedigree analysis of active maize breeding populations |
| US20100145624A1 (en) * | 2008-12-04 | 2010-06-10 | Syngenta Participations Ag | Statistical validation of candidate genes |
| BRPI1013399A2 (pt) | 2009-02-26 | 2016-04-05 | Liquidia Technologies Inc | sistema de entrega de fármaco intervencional e métodos associados |
| WO2013033221A1 (en) | 2011-08-31 | 2013-03-07 | Monsanto Technology Llc | Molecular markers associated with soybean tolerance to low iron growth conditions |
| US10138526B2 (en) | 2011-08-31 | 2018-11-27 | Monsanto Technology Llc | Molecular markers associated with stem canker resistance in soybean |
| HUE044521T2 (hu) | 2011-08-31 | 2019-10-28 | Seminis Vegetable Seeds Inc | Görögdinnye szilárdságával kapcsolatos eljárások és kompozíciók |
| HK1209794A1 (en) | 2012-03-20 | 2016-04-08 | 陶氏益农公司 | Molecular markers for low palmitic acid content in sunflower (helianthus annuus), and methods of using the same |
| WO2014025768A2 (en) | 2012-08-06 | 2014-02-13 | Seminis Vegetable Seeds, Inc. | Methods and compositions for producing watermelon plants with selected seed sizes |
| US10314253B2 (en) | 2012-12-04 | 2019-06-11 | Seminis Vegetable Seeds, Inc. | Methods and compositions for watermelon sex expression |
| AU2014239856A1 (en) | 2013-03-15 | 2015-09-10 | Dow Agrosciences Llc | Markers linked to reniform nematode resistance |
| US10059999B2 (en) | 2013-06-10 | 2018-08-28 | Monsanto Technology Llc | Molecular markers associated with soybean tolerance to low iron growth conditions |
| CA3002670A1 (en) | 2015-12-18 | 2017-06-22 | Donald Earl Kyle | Genetic loci associated with reproductive growth phenotypes in soybean and methods of use |
| WO2017136204A1 (en) | 2016-02-05 | 2017-08-10 | Pioneer Hi-Bred International, Inc. | Genetic loci associated with brown stem rot resistance in soybean and methods of use |
| CN108411021A (zh) * | 2018-03-13 | 2018-08-17 | 山东省农业科学院作物研究所 | 一种大豆百粒重相关的分子标记方法及其标记组合 |
| CN108384874A (zh) * | 2018-03-13 | 2018-08-10 | 山东省农业科学院作物研究所 | 一种大豆株高相关的分子标记方法及其标记组合 |
| CN108796117A (zh) * | 2018-06-20 | 2018-11-13 | 山东省农业科学院作物研究所 | 一个影响小麦品质和产量性状的主效qtl及其应用 |
| CN109486994B (zh) * | 2018-12-19 | 2021-05-25 | 华中农业大学 | 控制玉米穗长qtl位点的分子标记引物及应用 |
| EP3899021A4 (en) | 2018-12-20 | 2022-09-14 | Agrigenetics, Inc. | SNP MARKER AND SELECTION FOR LOW FIBER CONTENT IN BRASSICA |
| CN113412333B (zh) | 2019-03-11 | 2025-04-08 | 先锋国际良种公司 | 用于克隆植物生产的方法 |
| CN111489790B (zh) * | 2020-04-02 | 2023-03-17 | 华中农业大学 | 一种快速、高通量定位和克隆植物QTL基因的RapMap方法 |
| CN113652499B (zh) * | 2021-09-16 | 2023-06-09 | 中国农业科学院油料作物研究所 | 一种与油菜硒高效性状主效QTL位点qSe.C07紧密连锁的分子标记及应用 |
| DE102023105888A1 (de) | 2023-03-09 | 2024-09-12 | KWS SAAT SE & Co. KGaA | Verfahren zur Identifizierung eines Kandidaten, nämlich eines Genlocus und/oder einer Sequenzvariante, der für mindestens ein (phänotypisches) Merkmal indikativ ist |
Family Cites Families (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP0402401A4 (en) * | 1988-02-22 | 1991-09-11 | Pioneer Hi-Bred International | Genetic linkages between agronomically important genes and restriction fragment length polymorphisms |
| US5492547B1 (en) | 1993-09-14 | 1998-06-30 | Dekalb Genetics Corp | Process for predicting the phenotypic trait of yield in maize |
| US5412087A (en) | 1992-04-24 | 1995-05-02 | Affymax Technologies N.V. | Spatially-addressable immobilization of oligonucleotides and other biological polymers on surfaces |
| US5437697A (en) * | 1992-07-07 | 1995-08-01 | E. I. Du Pont De Nemours And Company | Method to identify genetic markers that are linked to agronomically important genes |
| US5491081A (en) | 1994-01-26 | 1996-02-13 | Pioneer Hi-Bred International, Inc. | Soybean cyst nematode resistant soybeans and methods of breeding and identifying resistant plants |
| US5571639A (en) | 1994-05-24 | 1996-11-05 | Affymax Technologies N.V. | Computer-aided engineering system for design of sequence arrays and lithographic masks |
-
1998
- 1998-12-18 DE DE69839350T patent/DE69839350T2/de not_active Revoked
- 1998-12-18 US US09/216,089 patent/US6399855B1/en not_active Expired - Lifetime
- 1998-12-18 WO PCT/US1998/026934 patent/WO1999032661A1/en not_active Ceased
- 1998-12-18 EP EP98964077A patent/EP1042507B1/en not_active Revoked
- 1998-12-18 AU AU19275/99A patent/AU1927599A/en not_active Abandoned
- 1998-12-23 AR ARP980106646A patent/AR014162A1/es unknown
Also Published As
| Publication number | Publication date |
|---|---|
| EP1042507A1 (en) | 2000-10-11 |
| WO1999032661A1 (en) | 1999-07-01 |
| DE69839350T2 (de) | 2009-06-04 |
| AU1927599A (en) | 1999-07-12 |
| EP1042507B1 (en) | 2008-04-09 |
| US6399855B1 (en) | 2002-06-04 |
| DE69839350D1 (de) | 2008-05-21 |
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