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  • Posted a comment on a wiki page on hananbegali

    hi I am trying to index human genome with both of the following: bwa index ucsc.hg19.fasta bwa index -a bwtsw ucsc.hg19.fasta OUTPUT: [bwa_index] Pack FASTA... 45.29 sec [bwa_index] Construct BWT for the packed sequence... [BWTIncCreate] textLength=6274322528, availableWord=453484340 [BWTIncConstructFromPacked] 10 iterations done. 100000000 characters processed. [BWTIncConstructFromPacked] 20 iterations done. 200000000 characters processed. [BWTIncConstructFromPacked] 30 iterations done. 300000000...

  • Posted a comment on discussion General Discussion on hananbegali

    hi I am trying to index human genome with both of the following: bwa index ucsc.hg19.fasta bwa index -a bwtsw ucsc.hg19.fasta OUTPUT: [bwa_index] Pack FASTA... 45.29 sec [bwa_index] Construct BWT for the packed sequence... [BWTIncCreate] textLength=6274322528, availableWord=453484340 [BWTIncConstructFromPacked] 10 iterations done. 100000000 characters processed. [BWTIncConstructFromPacked] 20 iterations done. 200000000 characters processed. [BWTIncConstructFromPacked] 30 iterations done. 300000000...

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hananbegali
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2018-07-01 18:55:21

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