SAM (Sequence Alignment/Map) is a flexible generic format for storing nucleotide sequence alignment. SAMtools provide efficient utilities on manipulating alignments in the SAM format.

The main samtools source code repository moved to GitHub in March 2012. For ongoing development since then, see http://github.com/samtools/samtools

Project Activity

See All Activity >

Categories

Bio-Informatics

License

BSD License, MIT License

Follow SAM tools

SAM tools Web Site

You Might Also Like
La version gratuite d'Auth0 s'enrichit ! Icon
La version gratuite d'Auth0 s'enrichit !

Gratuit pour 25 000 utilisateurs avec intégration Okta illimitée : concentrez-vous sur le développement de vos applications.

Vous l'avez demandé, nous l'avons fait ! Les versions gratuite et payante d'Auth0 incluent des options qui vous permettent de développer, déployer et faire évoluer vos applications en toute sécurité. Utilisez Auth0 dès maintenant pour découvrir tous ses avantages.
Essayez Auth0 gratuitement
Rate This Project
Login To Rate This Project

User Ratings

★★★★★
★★★★
★★★
★★
19
0
0
1
1
ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 4 / 5
support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5

User Reviews

  • A core component of many a bioinformatics pipeline
  • Error: $./samtools: /lib64/libz.so.1: version `ZLIB_1.2.3.3' not found (required by ./samtools) How can I fix this problem? THX
  • Brilliant idea, code is not robust. Doesn't check return status of malloc, other libraries. One shouldn't have to use gdb to understand an expected error.
    1 user found this review helpful.
  • Nice, thank you
    1 user found this review helpful.
  • Wonderful project! Thanks for amazing work!
    2 users found this review helpful.
Read more reviews >

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Developers, Science/Research

User Interface

Command-line, Curses/Ncurses

Programming Language

C, Perl

Related Categories

Perl Bio-Informatics Software, C Bio-Informatics Software

Registered

2008-11-25