MCScanX

MCScanX is a toolkit for detecting gene synteny and collinearity, aiding in the evolutionary analysis of gene arrangements across multiple genomes. It extends the original MCScan algorithm by incorporating additional utilities for visualization and downstream analyses.

Features

Detects syntenic blocks and collinear gene arrangements
Supports analysis across multiple genomes or subgenomes
Includes visualization tools for synteny maps
Provides utilities for evolutionary analysis
Facilitates identification of gene duplication events
Offers command-line tools for batch processing

Project Samples

Project Activity

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License

BSD License

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Additional Project Details

Programming Language

C++

Related Categories

C++ Libraries

Registered

2025-05-02

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