diCal2 Code

Demographic Inference using Composite Approximate Likelihood (Ver. 2)

Brought to you by: jackkamm, spence-jeffrey, steinrue, yssong

Commit	Date
[r59] by steinrue some stuff	2019-07-26 15:43:05	Tree
[r58] by steinrue some more manual	2019-07-24 23:35:43	Tree
[r57] by steinrue tiny bit more manual	2019-07-24 01:16:31	Tree
[r56] by steinrue more manual writing	2019-07-20 01:14:32	Tree
[r55] by steinrue started revamping the manual	2019-07-18 21:58:13	Tree
[r54] by steinrue small change of constants, but still doing weird stuff	2019-07-10 22:46:14	Tree
[r53] by steinrue Running the ODEs only until maxTime and taking the values did mess up the EM. Now, we adjusted the epsilons a bit and just throw errors, if it does not work.	2019-07-06 23:00:06	Tree
[r52] by steinrue ODE solver could, and in fringe cases did, run forever. Now there is a max time.	2019-07-05 14:16:25	Tree
[r51] by steinrue minor bug in coordinateOrder fixed	2019-07-04 12:52:52	Tree
[r50] by steinrue optimized M-steps (memoiziation) I think that I did not break anything, but the previous version was probably safer.	2019-07-03 20:14:34	Tree

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