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Best Reconciliation Software

Compare the Top Reconciliation Software as of October 2025

What is Reconciliation Software?

Reconciliation software automates the process of matching and verifying financial transactions across accounts, systems, and statements to ensure accuracy and consistency. It helps identify discrepancies, errors, or fraud by comparing data such as bank statements, invoices, payments, and general ledger entries. The software often includes features like automated matching rules, exception handling, audit trails, and reporting to streamline reconciliation workflows. By reducing manual effort and improving accuracy, reconciliation software enhances financial control, compliance, and audit readiness. It is widely used by finance teams in banking, accounting, and corporate environments to maintain trustworthy financial records. Compare and read user reviews of the best Reconciliation software currently available using the table below. This list is updated regularly.

  • 1
    Xero

    Xero

    Xero

    Xero makes bank reconciliation quick and easy. Automatically match your bank transactions with your accounting records, reducing manual entry and ensuring accuracy. With Xero, you can reconcile accounts in real-time, saving time and avoiding errors. The seamless integration with your bank feeds helps keep your financial data up-to-date and accurate, so you can focus on running your business with confidence.
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    Starting Price: $20/month
  • 2
    QuickBooks Online
    QuickBooks Online is the most popular accounting software in the world. QuickBooks Online makes accounting easy. Make tracking receipts, income, bank transactions, and more feel simple with the #1 small business accounting software. Snap photos of your receipts and link them to expenses right from your phone. Our agents are ready and available to answer all your QuickBooks questions. Use the apps you know and love to keep your business running smoothly. QuickBooks Online works on your PC, Mac, tablets, and phones. Click the link above to get a 30 day free trial and 50% off your first 3 months. More than accounting software. QuickBooks helps you track income, expenses, and stay ready for taxes. Customers find on average $3,534 in tax savings per year. Need more help? QuickBooks Live helps you stay organized and be ready for tax time. QuickBooks comes with a mobile app that help you run your business on the go—anytime, anywhere.
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    Starting Price: $9/month (normally $15/month)
  • 3
    Zoho Books
    Zoho Books is the ideal web-based accounting software of choice for small business. The platform was carefully created to help manage your finances, gets you tax ready, automates business workflows, and helps you work collectively across departments. On top of generating financial reports, knowing your Sales Tax liability and getting 1099s ready will no longer be a thing to dread, knowing you can scale with the software and securely collaborate with your team are also some of the neat features included. Get accounting right for growing businesses with Zoho Books, an easy-to-use online accounting solution. Zoho Books features include invoices, expenses, sales and purchase orders, contact management, project time tracking, and inventory management. With Zoho Books, organizations can automate recurring activities like payment reminders, billing, auto charge, and payment thank you note. Users can also track inventory in real-time with Zoho Books.
    Starting Price: $10.00/month
  • 4
    Express Accounts

    Express Accounts

    NCH Software

    Accounting software for small business that makes bookkeeping simple and easy. Document incoming and outgoing cash flow including sales, receipts, payments and purchases. See how your business is doing with real time balances and reports. Fax or email your accountant directly. Prepare your tax returns quickly with your financial reports. Secure remote/mobile access.
    Starting Price: $79.99/one-time
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