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Best Medical Accounting Software

Compare the Top Medical Accounting Software as of February 2026

What is Medical Accounting Software?

Medical accounting software is a type of software designed to help medical professionals track the financial aspects of their business. It can be used to manage accounts receivable, accounts payable, payroll, and invoicing. Many programs offer features such as customizable reporting, data export capabilities and integration with other business systems. Medical accounting software can save time by automating administrative tasks allowing medical professionals to focus on patient care. Compare and read user reviews of the best Medical Accounting software currently available using the table below. This list is updated regularly.

  • 1
    Striven

    Striven

    Miles IT

    Striven is the all-in-one business management software that lowers your costs, improves your operations, and makes work easier. Make your company’s data coherent, connected, and relevant. With over two decades of expertise in Software Services, we’ve collaborated to help over 8,600 organizations in dozens of industries make their operations more secure, efficient, and valuable to their customers. Helping people accomplish more has always been our mission. Now, it’s the heart of our software. We offer simple, straightforward pricing plans and an unbeatable guarantee. You can even get started right now at absolutely no cost. There’s no trial, expiration date, or contractual obligation on any of our plans.
    Starting Price: $35/month per user
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  • 2
    QuickBooks Online
    QuickBooks Online is the most popular accounting software in the world. QuickBooks Online makes accounting easy. Make tracking receipts, income, bank transactions, and more feel simple with the #1 small business accounting software. Snap photos of your receipts and link them to expenses right from your phone. Our agents are ready and available to answer all your QuickBooks questions. Use the apps you know and love to keep your business running smoothly. QuickBooks Online works on your PC, Mac, tablets, and phones. Click the link above to get a 30 day free trial and 50% off your first 3 months. More than accounting software. QuickBooks helps you track income, expenses, and stay ready for taxes. Customers find on average $3,534 in tax savings per year. Need more help? QuickBooks Live helps you stay organized and be ready for tax time. QuickBooks comes with a mobile app that help you run your business on the go—anytime, anywhere.
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    Starting Price: $9/month (normally $15/month)
  • 3
    Accounting Seed

    Accounting Seed

    Accounting Seed

    At Accounting Seed, we empower our customers with access to accurate and timely financial data to make better business decisions resulting in greater profitability. As the #1 accounting software built on Salesforce, Accounting Seed connects your entire business from sales to operations to finance within a single platform.
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    Starting Price: $750/company/month
  • 4
    Patriot Accounting

    Patriot Accounting

    Patriot Software

    Patriot Accounting is an innovative, cloud-based accounting and payroll system for accountants and small business owners. Simple and intuitive, Patriot Accounting helps users efficiently track monetary transactions, invoice customers, print forms, and pay bills. By leveraging Patriot Accounting, users have the capability to set up multiple accounts, including income and expense accounts, as well as handle various types of transactions such as money withdrawn or deposited, incoming money from product sales, money for payroll, and more. Patriot Accounting offers a host of features such as cash tracking, vendor account management, profit and loss statement, transaction summary reports, expense tracking, among others.
    Starting Price: $20/month
  • 5
    SAP Business ByDesign

    SAP Business ByDesign

    Navigator Business Solutions

    The right ERP system for Life Sciences, Consumer Products & Distribution companies that are focused on growth and their systems are holding them back. Built for early-stage to mid-market companies that plan to grow. SAP Business ByDesign is a complete, cloud-based ERP solution for fast-growing, start-up to mid-market businesses and subsidiaries that want to scale without the complexity and unnecessary cost. With SAP Business ByDesign, you get an affordable way to manage your entire business as an integrated whole, from accounting and financials, purchasing, inventory, sales, and customer support, all the way to operations, logistics, project management, and human resources. 36 End-to-End Process Scenarios built-in Operational Performance Sourcing & Procurement Project Management Reporting & Analytics Accounting & Finance CRM, Sales, & Marketing Service Support Human resources (Suite-in-a-Box)
    Starting Price: $22 per/user/month
  • 6
    InvoiceSherpa

    InvoiceSherpa

    InvoiceSherpa

    Enhance your cash flow management by implementing an automated accounts receivable system to expedite invoice processing. InvoiceSherpa's state-of-the-art software effectively handles overdue invoices and seamlessly integrates with leading accounting platforms. InvoiceSherpa offers a comprehensive suite of management tools to streamline your accounts receivable processes, ultimately accelerating your cash flow cycle and enhancing your financial performance and client relations. * Get Paid Instantly: InvoiceSherpa enables you to establish personalised invoice reminders for each user and seamlessly process Credit Card and ACH payments directly from those email reminders. Sit back and relax as the payments roll in. * Full Customer Portal: Facilitate the rapid deployment of a comprehensive customer portal enabling users to securely log in, manage their invoices, access a complete history of past invoices, and settle any outstanding invoices within the system.
    Starting Price: $49.00/month
  • 7
    AccountsIQ

    AccountsIQ

    AccountsIQ

    AccountsIQ cloud accounting software simplifies the capture, process and reporting of financial data across multiple locations. Put simply we transform finance functions by enabling CFOs, Finance Directors and Financial Controllers to: - Get a holistic view of their organisation and subsidiaries - Access real-time, powerful reports and KPIs - Get superb analytics through our multi-level coding capability - Automate consolidation - Work more effectively and flexibly with our collaboration tools and apps - Gain efficiencies through integration of key business systems. Our financial management software was awarded Mid-Market and Enterprise Accounting Software of the Year 2019 and 2018 and we were a finalist in 2020.
    Starting Price: £199
  • 8
    AccountEdge

    AccountEdge

    Priority Software US

    AccountEdge is a powerful, easy-to-use, small-business accounting software for the Mac and Windows desktop. With AccountEdge, business owners can organize, process, and report on their financial information so they can focus on their business. Features include: accounting, integrated payroll, sales and purchases, contact management, inventory tracking, time billing, and more. Invoicing - Create and send customer invoices for products, services, or time and track payment status on open sales. Expenses - Manage your vendors, payments, and recurring transactions. Banking - Manage money in and out in as much detail as you want. With integrated bank feeds and auto-match, reconciling your accounts is a breeze. Payroll - Pay your employees and tracking their pay, accruals, and expenses is critical to your business. Inventory - Manage your items and services and track their stock by location to ensure you have enough products on hand.
    Starting Price: $20/month
  • 9
    FloQast

    FloQast

    FloQast

    FloQast is an AI-powered accounting platform designed to optimize and automate the financial close process for businesses. It helps accounting teams reduce the time spent on reconciliations, audits, and financial reporting by providing real-time tracking, collaboration tools, and AI-driven transaction matching. The platform is built to integrate seamlessly with existing systems, enabling accounting professionals to focus on higher-level strategic tasks rather than routine data preparation. FloQast's AI agents elevate accountants from preparers to reviewers, streamlining the workflow and ensuring more accurate, timely financial results.
  • 10
    CashManager

    CashManager

    Accomplish

    Run your business your way. CashManager has both desktop and online versions available so you can run your business at your convenience. Choose CashManager Lite, Plus, or anywhere in between. You choose how you manage your accounting, so you are only paying for what you need. Import and categorise your statements with ease. When used with our automated bank feed, balancing the books has never been easier or more accurate. Always know how your business is performing with smart budgets and reports. Keeping on top of your cashflow has never been so easy! Easy to learn and quick to use! Improve your cashflow with smart invoicing that works for your business. Take complete control of your finances from your own computer, even without the internet.
    Starting Price: $500 one-time payment
  • 11
    R4

    R4

    Royal 4 Systems

    The R4 Enterprise ERP System is a complete supply chain management solution with financials, distribution, manufacturing, planning, inventory management, and reporting capabilities. R4 adapts to your unique business requirements and ensures a smooth, efficient process execution. R4’s advanced process automation technology handles routine tasks and lets you continuously improve processes in response to changing business conditions. Built-in scalability lets you add users, products, production sites, or warehouses and make other changes as the business grows. The application runs on any popular hardware platform, which includes Windows, IBM, Linux, Unix, etc. Royal 4 Systems has hundreds of installations on 6 continents, which include the US, Latin America, Canada, Australia, Europe, and Africa. Our ERP System adapts to your unique business requirements and ensures a smooth, efficient process execution.
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