Search Results for "wisp-vmd"
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Showing 19 open source projects for "wisp-vmd"
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BFEER
Binding Free Energy EstimatoR (BFEER): A VMD plugin for MMPBSA and LIE
BFEER is an open-source GUI-based VMD Plugin for estimating free energy using popular endpoint methods like MMPBSA and LIE. It is designed to work with NAMD's DCD-PSF files. -
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Jmol
An interactive viewer for three-dimensional chemical structures.
...Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. Multiple files can be loaded and compared. A rich scripting language and a well-developed web API allow easy customization of the user interface. Features include interactive animation and linear morphing. ...">
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vmdStore
vmdStore provides a user-friendly interface to free install VMD plugin
vmdStore provides a user-friendly interface to free install VMD plugins. vmdStore also helps you keeping the plugins always updated. Minimum Requirements Operating System: macOS, Linux, or Windows Visual Molecular Dynamics (VMD) 1.9.3 or later">
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wisp
Wisp - A preference based location finder app
...We introduced JJCluster to eliminate the rigorous way of researching about a place and visualizing the location in real time. This algorithm successfully finds the heart of a city when used in Wisp application. The main purpose of designing Wisp is to find the best location according to a set of preferences in a map. -
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MEMBPLUGIN
MEMBPLUGIN: studying membrane complexity in VMD
MEMBPLUGIN is a membrane analysis tool for molecular-dynamics simulations. It is a collection of visual and command-line tools that can be run within the Visual Molecular Dynamics (VMD) environment to analyze biomolecular simulations of lipid bilayers. -
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WISP
Weighted Implementation of Suboptimal Paths (WISP)
UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. -
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Truncate Trajectory (VMD plugin)
reduces the size of MD trajectories
Large trajectories have a lot of redundant hetero compounds which augment their size and render calculations cumbersome. Truncate Trajectory is designed to help you discard these compounds. It currently works only with parallelepiped unit cells and periodic boundary conditions, as it is able to detect periodic contacts with hetero compounds from the 26 nearest cells, and incorporates these compounds to the final trajectory. The dimensions and angles (a, b, c, alpha, beta, and gamma) should... -
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R2mk Mikrotik
R2mk Manejador de Usuarios Mikrotik
Sistema Manejador de Usuarios hotspot y PPPoE via web para mikrotik, corte y aviso automático, queue, perfiles y avisos propios del sistema, ativación automática al efectuar cobro, crear usuarios y facturas, tickets de pago etc. -
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birgHPCC
Rapid CUDA Cluster Deployment
...In addition to the increase in image size (less than 2 gigabytes) and a new Linux base (previously Debian, now Ubuntu), CUDA-capable bioinformatics software programs, such as NAMD, HOOMD-blue, VMD, GPU-HMMER and GPU-BLAST, are pre-installed in birgHPCC, along with the CUDA driver, libraries and software development kit (SDK). In short, birgHPCC is the world's first CUDA-ready, bioinformatics-based, live DVD. -
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WISP
A skill planner for Dungeon Fighter Online
A skill planner for Dungeon Fighter Online that is usable on the desktop or deployable to the web. Written in java -
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Control y registro simple de clientes para Wisp genera contratos recibos actualiza y borra registro incluye un listado de todos los clientes registrados administrador: admin llave: admin
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MIPGen
Simple Molecular Interaction Potential Generator in Python
Molecular Interaction Potential Generator MIPGEN is a python program that will calculate Molecular Interaction Potential grids over a given molecule, that could be either a protein or a small organic compound (drug). The output will be a series of grids with DX format (*.dx) that the user will be able to visualize using any Molecular visualization program like VMD, PyMol, Chimera... For more information on dependencies and usage, please read the Documentation. Users are welcome to post any bug or request under BUGS & REQUESTS menu. (sourceforge account will be needed). -
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Windows Internet Streaming Protocol - Simple client/server software that uses the directshow framework to stream out media files from a server to directshow compatible players using TCP/IP. Open url like wisp://server.com/filename.wmv from clients.
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Jedná se o open-source překlad sedmého vydání knihy Organic Chemistry od Johna McMurryho. Překlad je tvořen v LaTeXu, veškerá grafika bude vytvořena v open-source nástrojích jako je GIMP, InkSpace, xmGrace, VMD či TurboMole.
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It is transparent command prompt for windows. Unlike other similar transparent command prompt which uses simple opacity property to enable transparency. this vmd (vista style command prompt) provide 100% transparency without blurring of text.
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Web based front end and services providing network management, deployed and stock inventory, billing, usage, coverage information and other services required for daily operation and long term planning of the Wireless Internet Service Provider (WISP)
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Wisp is a small Scheme-like language designed to be easily used in various structured data processing tools. The accent is on simplicity, automatical generatibility, and efficiency. (Currently on long hiatus. Gauche has similar goals and is maturer.)
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Ultraviolet
A highly sophisticated proxy used for evading internet censorship
...It is designed with security and performance in mind. Ultraviolet intercepts HTTP requests with a service worker, while adhering to the while using libcurl.js or epoxy-tls with Wisp and is a leader in innovative web proxy technologies.
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