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Showing 13 open source projects for "biochemistry"

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  • 1

    Biochemistry

    Compares serum biochemistry parameters in selected animals

    Biochemistry compares your serum biochemistry parameters of animals with one's reference values (Kaneko et al, 2008) and can save laboratory card for tested parameters. Cat, dog, pig, cow and horse are included
    Downloads: 0 This Week
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  • 2
    AlphaFold 3

    AlphaFold 3

    AlphaFold 3 inference pipeline

    AlphaFold 3, developed by Google DeepMind, is an advanced deep learning system for predicting biomolecular structures and interactions with exceptional accuracy. This repository provides the complete inference pipeline for running AlphaFold 3, though access to the model parameters is restricted and must be obtained directly from Google under specific terms of use. The system is designed for scientific research applications in structural biology, biochemistry, and bioinformatics, enabling...
    Downloads: 2 This Week
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  • 3
    IntEnz is the name for the Integrated relational Enzyme database. IntEnz contains data curated and approved by the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB).
    Downloads: 0 This Week
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  • 4
    JBioFramework

    JBioFramework

    Growing suite of proteomics simulations for educational purposes

    JBioFramework (JBF) is a set of two different chemical separations simulations (2D Electrophoresis and Mass Spectrometry) that are frequently used in chemistry, biochemistry and proteomics research. It is written in the Java programming language and will run on any and all systems that have the JVM installed. As we continue to develop the software over the coming months/years and attempt to quantify the success of our efforts with testing and reviews, user input is very important. Please...
    Downloads: 1 This Week
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  • 5
    Open Babel
    Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, biochemistry, or related areas
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    Downloads: 626 This Week
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  • 6

    MS-ML Studio

    Free and Open-Source Tool for Mass Feature Extraction

    Mass spectrometer is a useful tool for biochemistry research field analysis. It is used to identify microorganisms, protein, chemical compounds and complex diseases by blood analysis. There is many tools and libraries to handle different steps of mass spectrometry (MS) data analysis. However, the integration of all these tools lacks user friendly approaches. We developed a machine learning solution capable to handle all steps of MS data analysis. The ML-MS Tool is an free software...
    Downloads: 0 This Week
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  • 7
    PseAAC-Builder
    ... Xu, Yang Gao. PseAAC-Builder: A cross-platform stand-alone program for generating various special Chou's pseudo-amino acid compositions. Analytical Biochemistry 425 (2012) pp.117-119
    Downloads: 0 This Week
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  • 8
    Portable Linux

    Portable Linux

    Portable Ubuntu Linux for Scientific Computing

    Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated. https://sourceforge.net/projects/portable-linux/files...
    Downloads: 5 This Week
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  • 9
    ByoDyn (http://cbbl.imim.es/ByoDyn) is a software tool for the study of biochemical networks within the framework of systems biology. SBML compatible, ByoDyn is a group effort of the Computational Biochemistry and Biophysics Lab.
    Downloads: 0 This Week
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  • 10
    A sorting tool for Bioinformatics, Biochemistry and/or Molecular biology. This sorts nucleotide sequences aligned using "ClustalW". There may be a way to do this w/ original app, but someone I know couldn't figure out how - thus this project was born
    Downloads: 0 This Week
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  • 11
    Test yourself with questions related to the basic subjects in medicine. Subjects included are Anatomy, Physiology, Biochemistry, Pathology, Pharmacology and Microbiology.
    Downloads: 0 This Week
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  • 12
    The Virtual Molecular Biology Lab models electrophoresis for biochemistry students allowing them to practice the techniques involved without the cost in money and time of the equivalent real-world experiment.
    Downloads: 0 This Week
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  • 13
    GENtle is a free multipurpose tool for genetics and biochemistry. It manages DNA and amino acid sequences, does PCR, restriction, ligation, sequence annotation etc.
    Downloads: 2 This Week
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