Open Source R Software for Windows
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R Software for Windows
View 25857 business solutionsBrowse free open source R Software for Windows and projects below. Use the toggles on the left to filter open source R Software for Windows by OS, license, language, programming language, and project status.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Data Center Infrastructure ManagementnetTerrain DCIM is a Data Center Infrastructure Management (DCIM) software that helps organizations automate and simplify the management of its entire Data Center and IT infrastructure. This solution is used by organizations that need to manage environmental capacity with less effort (space, rack, data, and power), track their IT assets and inventory, and efficiently manage cabling.
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ggplot2
An implementation of the Grammar of Graphics in R
ggplot2 is a system written in R for declaratively creating graphics. It is based on The Grammar of Graphics, which focuses on following a layered approach to describe and construct visualizations or graphics in a structured manner. With ggplot2 you simply provide the data, tell ggplot2 how to map variables to aesthetics, what graphical primitives to use, and it will take care of the rest. ggplot2 is over 10 years old and is used by hundreds of thousands of people all over the world for plotting. In most cases using ggplot2 starts with supplying a dataset and aesthetic mapping (with aes()); adding on layers (like geom_point() or geom_histogram()), scales (like scale_colour_brewer()), and faceting specifications (like facet_wrap()); and finally, coordinating systems. ggplot2 has a rich ecosystem of community-maintained extensions for those looking for more innovation. ggplot2 is a part of the tidyverse, an ecosystem of R packages designed for data science. -
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Introduction to Zig
An open, technical and introductory book for the Zig programming lang
This is the official repository for the book "Introduction to Zig: a project-based Book", written by Pedro Duarte Faria. To know more about the book, check out the About this book section below. You can read the current version of the book in your web browser. The book is built using the publishing system Quarto in conjunction with a little bit of R code (zig_engine.R), which is responsible for calling the Zig compiler to compile and run the Zig code examples. -
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Shiny
Build interactive web apps directly from R with Shiny framework
Shiny is an R package from RStudio that enables users to build interactive web applications using R without requiring knowledge of JavaScript, HTML, or CSS. It allows statisticians and data scientists to turn their analyses into fully functional web dashboards with reactive elements, data inputs, visualizations, and controls, making data communication more effective and dynamic. -
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dplyr
dplyr: A grammar of data manipulation
dplyr is an R package that provides a consistent and intuitive grammar for data manipulation, enabling users to filter, arrange, summarize, and transform data efficiently. Part of the tidyverse ecosystem, dplyr simplifies complex data operations through a clear and readable syntax, whether working with data frames, tibbles, or databases. It is widely used in data science and statistical analysis workflows. -
Quality and compliance software for growing life science companiesAutomate gap analysis across FDA, ISO 13485, MDR, and 28+ regulatory standards. Cross-map evidence once, reuse across submissions. Get real-time risk alerts and board-ready dashboards, so you can expand into new markets with confidence
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hrbrthemes
Opinionated, typographic-centric ggplot2 themes and theme components
hrbrthemes is a focused ggplot2 theme package with an emphasis on typography, layout precision, and visual polish. It includes themes like theme_ipsum and Font scales tailored for clean, high‑quality production graphics. -
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Awesome Network Analysis
A curated list of awesome network analysis resources
awesome-network-analysis is a curated list of resources focused on network and graph analysis, including libraries, frameworks, visualization tools, datasets, and academic papers. It covers multiple programming languages and domains like sociology, biology, and computer science. This repository serves as a central reference for researchers, analysts, and developers working with network data. -
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ggstatsplot
Enhancing {ggplot2} plots with statistical analysis
{ggstatsplot} is an extension of {ggplot2} package for creating graphics with details from statistical tests included in the information-rich plots themselves. In a typical exploratory data analysis workflow, data visualization and statistical modeling are two different phases: visualization informs modeling, and modeling in its turn can suggest a different visualization method, and so on and so forth. Bayesian hypothesis-testing. The central idea of {ggstatsplot} is simple: combine these two phases into one in the form of graphics with statistical details, which makes data exploration simpler and faster. Summary of statistical tests and effect sizes. -
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tidyverse
Easily install and load packages from the tidyverse
tidyverse is a meta‑package that installs and loads a cohesive suite of R packages designed for data science, sharing underlying design principles, grammar, and data structures. Core components include ggplot2, dplyr, tidyr, readr, purrr, tibble, stringr, forcats, and more. It promotes tidy data workflows and consistency across tasks. -
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RStan
RStan, the R interface to Stan
RStan is the R interface to Stan, a C++ library for statistical modeling and high-performance statistical computation. It lets users specify models in the Stan modeling language (for Bayesian inference), compile them, and perform inference from R. Key inference approaches include full Bayesian inference via Hamiltonian Monte Carlo (specifically the No-U-Turn Sampler, NUTS), approximate Bayesian inference via variational methods, and optimization (penalized likelihood). RStan integrates with Stan’s automatic differentiation library, provides diagnostics, model comparison, posterior predictive checks, etc. It is used in research, applied statistics, and modelling workflows where flexibility and rigor in Bayesian methods are required. -
eMaint is an award-winning Computerized Maintenance Management Software (CMMS) for managing work orders, PM schedules, and parts inventory.eMaint is an award-winning, cloud-based Computerized Maintenance Management System (CMMS) software designed to improve how organizations manage their maintenance reliability operations, resources, equipment, and compliance. Suitable for any size organization or enterprise, eMaint saves companies valuable time and money by integrating the tools they need in one powerful platform.
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clusterProfiler
A universal enrichment tool for interpreting omics data
clusterProfiler is an R/Bioconductor package that provides a unified workflow for functional enrichment analysis to interpret high-throughput omics results. It supports both over-representation analysis and gene set enrichment analysis, letting you work with unranked gene lists or ranked statistics from differential pipelines. The package connects to multiple knowledge bases—such as Gene Ontology, KEGG, Reactome, Disease Ontology, MeSH and others—through a consistent interface so you can query different biological lenses without rewriting code. It is designed for breadth, covering coding and non-coding features and thousands of organisms by leveraging continuously updated annotations. Results are returned in tidy, manipulation-friendly structures and pair naturally with rich visualization functions (via companion tooling) to summarize pathways, terms, and gene–set relationships. -
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esquisse
RStudio add-in to make plots interactively with ggplot2
The purpose of this add-in is to let you explore your data quickly to extract the information they hold. You can create visualization with {ggplot2}, filter data with {dplyr} and retrieve generated code. This addin allows you to interactively explore your data by visualizing it with the ggplot2 package. It allows you to draw bar plots, curves, scatter plots, histograms, boxplot and sf objects, then export the graph or retrieve the code to reproduce the graph. This addin allows you to interactively explore your data by visualizing it with the ggplot2 package. It allows you to draw bar plots, curves, scatter plots, histograms, boxplot and sf objects, then export the graph or retrieve the code to reproduce the graph. -
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gganimate
A Grammar of Animated Graphics
gganimate extends the grammar of graphics as implemented by ggplot2 to include the description of animation. It does this by providing a range of new grammar classes that can be added to the plot object in order to customize how it should change with time. Here we take a simple boxplot of fuel consumption as a function of cylinders and let it transition between the number of gears available in the cars. As this is a discrete split (gear being best described as an ordered factor) we use transition_states and provide a relative length to use for transition and state view. As not all combinations of data are present there are states missing a box. We define that when a box appears it should fade into view, whereas it should shrink away when it disappears. Lastly, we decide to use a sinusoidal easing for all our aesthetics (here, only y is changing) gganimate is available on CRAN and can be installed with install.packages('gganimate'). -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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IRkernel
R kernel for Jupyter
For detailed requirements and install instructions see irkernel.github.io. Per default IRkernel::installspec() will install a kernel with the name “ir” and a display name of “R”. Multiple calls will overwrite the kernel with a kernel spec pointing to the last R interpreter you called that commands from. You can install kernels for multiple versions of R by supplying a name and display name argument to the install spec() call (You still need to install these packages in all interpreters you want to run as a Jupyter kernel!): -
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Seurat
R toolkit for single cell genomics
Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies. -
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on potential ligand-target links can then be used to infer active ligand-target links between interacting cells. NicheNet prioritizes ligands according to their activity (i.e., how well they predict observed changes in gene expression in the receiver cell) and looks for affected targets with high potential to be regulated by these prioritized ligands. -
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Huxtable
An R package to create styled tables in multiple output formats
Huxtable is an R package to create LaTeX and HTML tables, with a friendly, modern interface. Features include control over text styling, number format, background color, borders, padding, and alignment. Cells can span multiple rows and/or columns. Tables can be manipulated with standard R subsetting or dplyr functions. -
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Statistical Rethinking 2023
Statistical Rethinking Course for Jan-Mar 2023
The 2023 edition modernizes and expands on the same curriculum, adjusting exercises and code for newer versions of R, Stan, and supporting packages. It continues to provide scripts for lectures and tutorials, while integrating refinements to examples, notation, and computational workflows introduced that year. Compared with 2022, some models are rewritten for clarity, and teaching materials reflect refinements in McElreath’s evolving presentation of Bayesian data analysis. Students following the 2023 lecture videos use this repository as their coding reference. There are 10 weeks of instruction. Links to lecture recordings will appear in this table. Weekly problem sets are assigned on Fridays and due the next Friday, when we discuss the solutions in the weekly online meeting. -
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blavaan
An R package for Bayesian structural equation modeling
blavaan is a free, open-source R package for Bayesian latent variable analysis. It relies on JAGS and Stan to estimate models via MCMC. The blavaan functions and syntax are similar to lavaan. The development version of blavaan (containing updates not yet on CRAN) can be installed via the command provided in the documentation. Compilation is required; this may be a problem for users who currently rely on a binary version of blavaan from CRAN. The blavaan package depends on the lavaan package for model specification and for some computations. This means that, if you already know lavaan, then you should already be able to do many things in blavaan. In particular, many blavaan commands add the letter “b” to the start of the lavaan command. It is also sometimes possible to use a lavaan command on a blavaan object, though the results may not always be what you expect. -
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gt R
Easily generate information-rich, publication-quality tables from R
With the gt package, anyone can make wonderful-looking tables using the R programming language. The gt philosophy: we can construct a wide variety of useful tables with a cohesive set of table parts. These include the table header, the stub, the column labels and spanner column labels, the table body, and the table footer. It all begins with table data (be it a tibble or a data frame). You then decide how to compose your gt table with the elements and formatting you need for the task at hand. Finally, the table is rendered by printing it at the console, including it in an R Markdown document, or exporting it to a file using gtsave(). Currently, gt supports the HTML, LaTeX, and RTF output formats. -
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mathpix
Query the mathpix API to convert math images to LaTeX
Query the mathpix API to convert math images to LaTeX. -
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pointblank
Data quality assessment and metadata reporting for data frames
With the pointblank package it’s really easy to methodically validate your data whether in the form of data frames or as database tables. On top of the validation toolset, the package gives you the means to provide and keep up-to-date with the information that defines your tables. For table validation, the agent object works with a large collection of simple (yet powerful!) validation functions. We can enable much more sophisticated validation checks by using custom expressions, segmenting the data, and by selective mutations of the target table. The suite of validation functions ensures that everything just works no matter whether your table is a data frame or a database table. Sometimes, we want to maintain table information and update it when the table goes through changes. For that, we can use an informant object plus associated functions to help define the metadata entries and present it as a data dictionary. -
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DiagrammeR
Graph and network visualization using tabular data in R
DiagrammeR is an R package to create, manipulate, and visualize network graphs, flowcharts, diagrams, and more using Graphviz and Mermaid syntax. Integrates with RMarkdown and Shiny apps, supports node/edge traversal, and graph analysis algorithms, making it ideal for documenting processes, causal relationships, or data pipelines. -
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Mastering Shiny
Mastering Shiny: a book
Mastering Shiny is a book (and its accompanying source repository) by Hadley Wickham that teaches people how to build interactive web applications using Shiny in R. It starts from basics (your first app, UI components, reactivity) and progresses to more advanced topics (dynamic UIs, modules, testing, security, performance). It is intended to help data scientists, analysts, or R users who may not have deep experience in web technologies become expert Shiny developers. The source code is open, and the book is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License. -
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Paper2GUI
Convert AI papers to GUI
Convert AI papers to GUI，Make it easy and convenient for everyone to use artificial intelligence technology。让每个人都简单方便的使用前沿人工智能技术 Paper2GUI: An AI desktop APP toolbox for ordinary people. It can be used immediately without installation. It already supports 40+ AI models, covering AI painting, speech synthesis, video frame complementing, video super-resolution, object detection, and image stylization. , OCR recognition and other fields. Support Windows, Mac, Linux systems. Paper2GUI: 一款面向普通人的 AI 桌面 APP 工具箱，免安装即开即用，已支持 40+AI 模型，内容涵盖 AI 绘画、语音合成、视频补帧、视频超分、目标检测、图片风格化、OCR 识别等领域。支持 Windows、Mac、Linux 系统。