WO2023011614A1 - 抗pd-l1纳米抗体及其应用 - Google Patents
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- C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
- C07K16/2803—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily
- C07K16/2818—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily against CD28 or CD152
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- A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
- A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
- A61K47/6835—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site
- A61K47/6849—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a receptor, a cell surface antigen or a cell surface determinant
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- C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
- C07K16/2803—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily
- C07K16/2827—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily against B7 molecules, e.g. CD80, CD86
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- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
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- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
- C07K2317/567—Framework region [FR]
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- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
- C07K2317/569—Single domain, e.g. dAb, sdAb, VHH, VNAR or nanobody®
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- C07K2319/00—Fusion polypeptide
- C07K2319/20—Fusion polypeptide containing a tag with affinity for a non-protein ligand
- C07K2319/22—Fusion polypeptide containing a tag with affinity for a non-protein ligand containing a Strep-tag
Definitions
- the present invention claims the priority of the Chinese patent application with the application number 202110903293.4 submitted on August 6, 2021, and the priority of the Chinese patent application with the application number 202111162303.X submitted on September 30, 2021, and its quoted in whole or in part in this text.
- the invention relates to the field of biomedicine, in particular to an anti-PD-L1 nanobody and its application.
- programmed death ligand 1 plays a key role, which can bind programmed death receptor 1 (Programmed Death-1, PD-1 ), induce tumor-specific T cell apoptosis by inhibiting T cell activation, and play an immune escape and immunosuppressive role in pathological conditions such as tumors and chronic inflammation.
- PD-L1 can restore and enhance the function of T cells by blocking the interaction of PD-1/PD-L1, so that it can play a role in tumor therapy and immune regulation. At the same time, it can also help fully activate T cell function and cytokine production by blocking the co-inhibitory function of CD80 and PD-L1.
- Atezolizumab atezolizumab, trade name Tecentriq
- Durvalumab durvalumab
- Avelumab avelumab
- Bavencio antibodies
- various types of solid tumors such as non-small cell lung cancer, melanoma, lymphoma, head and neck cancer, and gastric cancer, etc., and have shown good tumor therapeutic effects.
- Nanobodies are heavy chain-only antigen-binding fragments derived from Camelidae that are capable of functioning in the absence of light chains.
- the molecular weight of nanobodies is relatively small, usually 12-16KDa, and at the same time, it retains the binding activity with antigens, and it does not require intra-chain disulfide bonds, so it is gradually emerging in immunotherapy.
- Nanobodies are easily expressed in a variety of different expression systems, such as prokaryotic expression systems (such as in Escherichia coli), eukaryotic expression systems (such as yeast), and mammalian cell expression systems (such as CHO, HEK-293 cells), etc. expressed and easily purified.
- prokaryotic expression systems such as in Escherichia coli
- eukaryotic expression systems such as yeast
- mammalian cell expression systems such as CHO, HEK-293 cells
- Nanobodies have shown unique development and application value in cancer, autoimmune diseases, respiratory diseases, blood system diseases, etc., and more and more pharmaceutical companies are focusing on the development of nanobodies.
- nanobodies are more common. There are still difficulties in screening nanobodies with high affinity, high specificity and industrialization prospects, which limits the research and development of nanobodies.
- the present invention proposes an anti-PD-L1 nanobody and its use in disease treatment.
- the present invention provides an anti-PD-L1 nanobody, a fusion protein comprising the PD-L1 nanobody, and the use of the nanobody or fusion protein in disease treatment, especially cancer treatment.
- a first aspect of the present invention provides an anti-PD-L1 nanobody comprising CDR1, CDR2 and CDR3, wherein (a) CDR1 comprises a sequence selected from the group consisting of SEQ ID NO:1, 5 and 9, or with SEQ ID NO:1, 5 and 9 Compared with ID NO: 1, 5 and 9, there is a sequence of one or two amino acid substitutions, deletions or additions; (b) CDR2 comprises a sequence selected from the group consisting of: SEQ ID NO: 2, 6 and 10, or with SEQ ID NO: 2, 6 and 10 ID NO: 2, 6 and 10 compare, have the sequence of one or two aminoacid substitutions, deletion or addition; (c) CDR3 comprises the sequence selected from the following group: SEQ ID NO: 3, 7, 11 and 14, or Sequences having one, two or three amino acid substitutions, deletions or additions compared to SEQ ID NO: 3, 7, 11 and 14.
- the present invention also provides an anti-PD-L1 nanobody, selected from: i) having such as SEQ ID NO: 4, or SEQ ID NO: 8, or SEQ ID NO: 12, or SEQ ID NO: 13, or SEQ ID NO: 15, or SEQ ID NO: 28, or SEQ ID NO: 29, or SEQ ID NO: 30, or the amino acid sequence shown in SEQ ID NO: 31 or SEQ ID NO: 32; or ii) and i)
- the homology is more than 85%, more than 86%, more than 87%, more than 88%, more than 89%, more than 90%, more than 91%, more than 92%, more than 93%, more than 94%, more than 95% , more than 96%, more than 97%, more than 98%, or more than 99% of the amino acid sequences.
- the anti-PD-L1 nanobody provided includes: (1) having CDR1 having the amino acid sequence shown in SEQ ID NO:1, CDR2 having the amino acid sequence shown in SEQ ID NO:2, and CDR3 being The amino acid sequence shown in SEQ ID NO: 3; or (2) having the amino acid sequence shown in SEQ ID NO: 5 for CDR1, the amino acid sequence shown in SEQ ID NO: 6 for CDR2, and the amino acid sequence shown in SEQ ID NO: 7 for CDR3 or (3) having the amino acid sequence shown in SEQ ID NO: 9 for CDR1, the amino acid sequence shown in SEQ ID NO: 10 for CDR2, and the amino acid sequence shown in SEQ ID NO: 11 for CDR3; or (4) CDR1 has the amino acid sequence shown in SEQ ID NO:1, CDR2 has the amino acid sequence shown in SEQ ID NO:2, and CDR3 has the amino acid sequence shown in SEQ ID NO:14.
- the second aspect of the present invention provides a fusion protein, the fusion protein comprising: a first domain, the first domain is the anti-PD-L1 Nanobody described in the first aspect of the present invention, and a second structural domain domain, and the second domain is a functional protein different from the anti-PD-L1 Nanobody.
- the third aspect of the present invention provides an antibody conjugate comprising the anti-PD-L1 nanobody described in the first aspect of the present invention or the fusion protein described in the second aspect of the present invention; and The anti-PD-L1 nanobody or a functional small molecule linked to the fusion protein.
- the fourth aspect of the present invention provides an isolated polynucleotide, which encodes the anti-PD-L1 Nanobody of the first aspect or encodes the fusion protein of the second aspect.
- the fifth aspect of the present invention provides a construct comprising the isolated polynucleotide described in the fourth aspect above.
- the sixth aspect of the present invention provides a host cell containing the isolated polynucleotide described in the fourth aspect above or the construct described in the fifth aspect above.
- the seventh aspect of the present invention provides a method for producing Nanobodies or fusion proteins, comprising: cultivating host cells, the host cells being the host cells described in the sixth aspect of the present invention, and collecting the Nanobodies from the culture. Antibodies or fusion proteins.
- the eighth aspect of the present invention provides a pharmaceutical composition, comprising the anti-PD-L1 nanobody described in the first aspect above, or the fusion protein described in the second aspect above, or the antibody conjugate described in the third aspect above joint; and a pharmaceutically acceptable carrier.
- the ninth aspect of the present invention provides a kit, comprising the anti-PD-L1 nanobody described in the first aspect above, or the fusion protein described in the second aspect above, or the antibody conjugate described in the third aspect above things.
- the tenth aspect of the present invention provides a method for preventing and/or treating diseases, comprising: administering to a subject a preventive and/or therapeutically effective amount of the anti-PD-L1 Nanobody described in the first aspect above, or the second The fusion protein described in the aspect, or the antibody conjugate described in the third aspect.
- the eleventh aspect of the present invention provides a use of an anti-PD-L1 nanobody or a fusion protein or an antibody conjugate in the preparation of a drug or a kit, and the anti-PD-L1 nanobody is the one described in the first aspect of the present invention
- the anti-PD-L1 nanobody described above, the fusion protein is the fusion protein described in the second aspect of the present invention, and the antibody conjugate is the antibody conjugate described in the third aspect of the present invention.
- Fig. 1 is the result of FACS detection of binding activity between antibody and hPD-L1 provided in Example 2 of the present invention.
- Fig. 2 is the result of ELISA detection antibody and cynomolgus PD-L1 binding activity provided by Example 2 of the present invention.
- Figure 3 is the results of FACS detection of the blocking activity of antibodies against PD1/PD-L1 provided in Example 3 of the present invention.
- Fig. 4 is the result of FACS detecting the blocking activity of antibodies against CD80/PD-L1 provided in Example 3 of the present invention.
- Fig. 5 is the result of blocking the PD-L1/PD-1 pathway by the reporter gene detection antibody provided in Example 4 of the present invention.
- Fig. 6 is the result of the drug efficacy of the antibody provided in Example 7 of the present invention in mice.
- the term "antibody” is used in the broadest sense to refer to a protein or polypeptide comprising an antigen-binding site or an antigen-binding fragment or antigen-binding portion, covering natural and artificial antibodies of various structures, including but not limited to intact antibodies forms or antigen-binding fragments of antibodies.
- the antibody provided is a Nanobody.
- Nanobodies have the same meaning as the single domain antibody, and refers to an antibody composed of only one heavy chain variable region, which is the smallest antigen-binding fragment with complete functions.
- Nanobodies comprise four conserved framework regions (FR1-FR4) and three complementarity determining regions (CDR1-CDR3) mentioned below.
- the framework region FR1, the framework region FR2, the framework region FR3 and the framework region FR4 are separated by the complementarity determining region CDR1, the complementarity determining region CDR2 and the complementarity determining region CDR3, respectively.
- the complementarity-determining region is also called “hypervariable region", and the complementarity-determining region determines the binding characteristics with the antigen.
- Humanized antibody refers to a molecule based on an antigen-binding site derived from a non-human species, and an antibody based on the partial structure and sequence composition of a human immunoglobulin molecule. Compared with non-humanized antibodies, humanized antibodies retain antigen-binding activity while reducing immunogenicity.
- Nanobodies or fusion proteins mentioned herein are usually isolatable or recombinant.
- isolated means capable of being identified and isolated and/or recovered from a cell or cell culture expressing a polypeptide or protein.
- an isolated polypeptide eg, an isolated antibody or an isolated fusion protein
- isolated antibody means that it is substantially free of other antibodies or antigen-binding fragments of different antigen specificities (such as an isolated antibody that specifically binds PD-L1 is substantially free of antibodies that specifically bind antigens other than PD-L1) .
- Recombinant means that antibodies can be produced in foreign host cells using genetic recombination techniques.
- affinity or “binding affinity” mentioned herein is understood according to the common meaning in the art, and is used to reflect the strength and/or stability between the antigen and the binding site on the antibody or antigen-binding fragment.
- Specifically binds to or “specifically binds to” a particular antigen or epitope, or “has specificity” for a particular antigen or epitope means to distinguish it from non-specific interactions, such specific binding can be determined by commonly used in the art measured by some methods.
- the ability of an antibody or antigen to bind can be measured by enzyme-linked immunosorbent assay (ELISA) or other techniques familiar to those skilled in the art.
- ELISA enzyme-linked immunosorbent assay
- the cells carrying the antigen can be detected by flow cytometry, and the competitive binding between the antibody to be tested and the labeled antibody can be detected by measuring the positive rate index of the cells. Since the spatial structure of the antigen on the cell surface is closer to the form existing in the body, this method can better reflect the real situation.
- the provided Nanobodies have ⁇ 100nM, ⁇ 100nM, ⁇ 50nM, ⁇ 20nM, ⁇ 10nM, ⁇ 5nM, ⁇ 1nM, ⁇ 0.5nM, ⁇ 0.1nM, ⁇ 0.09nM, ⁇ 0.08nM , ⁇ 0.07nM, ⁇ 0.06nM, ⁇ 0.05nM, ⁇ 0.04nM, ⁇ 0.03nM, ⁇ 0.02nM, ⁇ 0.01nM, ⁇ 0.001nM EC50 values.
- the binding activity of the antibody to the antigen can also be measured by surface isoparticle resonance (SPR) or biofilm interferometry (BLI).
- amino acid names are indicated by standard one-letter or three-letter codes commonly used in the art.
- the "homology" of the sequences referred to herein refers to the degree of sequence identity of proteins or polypeptides or nucleic acid sequences. To determine homology, this can be done in various ways known in the art. For example, it can be obtained by using publicly available software such as BLAST, ALIGN, BLAST-2 and other software.
- a "conservative amino acid substitution" of a sequence referred to herein refers to the replacement of another amino acid residue with a different amino acid residue having a side chain with similar physiochemical properties. For example, conservative amino acid substitutions can be made between amino acid residues with hydrophobic side chains (e.g.
- the CDR sequences of the antibodies shown in this paper are obtained by combining existing database analysis, for example, by combining the IMGT database (Ehrenmann F., Kaas Q. and Lefranc M.-P. Nucleic Acids Res., 38:D301-D307 (2010); Ehrenmann, F., Lefranc, M.-P. Cold Spring Harbor Protoc., 6:737-749 (2011)).
- IMGT database Ehrenmann F., Kaas Q. and Lefranc M.-P. Nucleic Acids Res., 38:D301-D307 (2010); Ehrenmann, F., Lefranc, M.-P. Cold Spring Harbor Protoc., 6:737-749 (2011).
- Kabat for example, you can participate in U.S.Dept.of Health and Human Services, "Sequences of Proteins of Immunological Interest" (1983)
- Chothia for example, you can refer to J.Mol.Biol.196:901-917 (1987)
- the present invention provides an anti-PD-L1 nanobody comprising CDR1, CDR2 and CDR3, wherein (a) CDR1 comprises a sequence selected from the group consisting of SEQ ID NO:1, 5 and 9, or with SEQ ID NO:1 , 5 and 9 sequences, one or two amino acid substitutions, deletions or additions occur; (b) CDR2 comprises a sequence selected from the following group: SEQ ID NO: 2, 6 and 10, or with SEQ ID NO: Compared with 2, 6 and 10, one or two amino acid substitutions, deletions or additions occur; (c) CDR3 comprises a sequence selected from the group consisting of SEQ ID NO: 3, 7, 11 and 14, or with SEQ ID NO: 3, 7, 11 and 14 NO: Compared with sequences 3, 7, 11 and 14, one, two, three or four amino acid substitutions, deletions or additions occurred.
- CDR1 comprises a sequence selected from the group consisting of SEQ ID NO:1, 5 and 9, or with SEQ ID NO:1 , 5 and 9 sequences, one or two amino acid
- the mentioned amino acid deletion may be the deletion of two alanines (abbreviated as AA) or one alanine and one threonine (abbreviated as AT) at the N-terminus of the listed CDR3 sequence.
- the amino acid increase mentioned may be sequentially connected to the C-terminus of the listed CDR1 sequence with methionine (abbreviated as M) and glycine (abbreviated as G), or sequentially connected with methionine (abbreviated as M ) and arginine (abbreviated as R) and so on.
- the invention provides an anti-PD-L1 nanobody selected from: (1) having CDR1 as the amino acid sequence shown in SEQ ID NO:1, CDR2 as the amino acid sequence shown in SEQ ID NO:2, and CDR3 as SEQ ID The amino acid sequence of NO:3; or (2) having the amino acid sequence shown in SEQ ID NO:5 for CDR1, the amino acid sequence shown in SEQ ID NO:6 for CDR2, and the amino acid sequence shown in SEQ ID NO:7 for CDR3 or (3) having CDR1 as the amino acid sequence shown in SEQ ID NO:9, CDR2 as the amino acid sequence shown in SEQ ID NO:10, and CDR3 as the amino acid sequence shown in SEQ ID NO:11; or (4) having CDR1 is the amino acid sequence shown in SEQ ID NO:1, CDR2 is the amino acid sequence shown in SEQ ID NO:2, and CDR3 is the amino acid sequence shown in SEQ ID NO:14.
- the provided Nanobody has a sequence with one or two amino acid substitutions, deletions or additions compared to the sequence shown in SEQ ID NO:1; has a sequence compared to the sequence shown in SEQ ID NO:2 , a sequence with one or two amino acid substitutions, deletions or additions; and a sequence with one, two, three or four amino acid substitutions, deletions or additions compared with the sequence shown in SEQ ID NO:3.
- the provided Nanobody has a sequence with one or two amino acid substitutions, deletions or additions compared to the sequence shown in SEQ ID NO:5; has a sequence compared to the sequence shown in SEQ ID NO:6 , a sequence with one or two amino acid substitutions, deletions or additions; and a sequence with one, two, three or four amino acid substitutions, deletions or additions compared with the sequence shown in SEQ ID NO:7.
- the provided Nanobody has a sequence with one or two amino acid substitutions, deletions or additions compared to the sequence shown in SEQ ID NO: 9; has a sequence compared to the sequence shown in SEQ ID NO: 10 , a sequence with one or two amino acid substitutions, deletions or additions; and a sequence with one, two, three or four amino acid substitutions, deletions or additions compared with the sequence shown in SEQ ID NO:11.
- the provided Nanobody has a sequence with one or two amino acid substitutions, deletions or additions compared to the sequence shown in SEQ ID NO:1; has a sequence compared to the sequence shown in SEQ ID NO:2 , a sequence with one or two amino acid substitutions, deletions or additions; and a sequence with one, two, three or four amino acid substitutions, deletions or additions compared with the sequence shown in SEQ ID NO:14.
- amino acid sequences of the mentioned CDR regions are shown in Table 1 below:
- the present invention provides an anti-PD-L1 nanobody, comprising a variable region domain composed of a framework region FR and a complementarity determining region CDR.
- the provided Nanobodies comprise, in addition to the mentioned CDR sequences, the framework regions FR.
- the framework region FR includes FR1, FR2, FR3 and FR4, and the framework region FR and CDR sequences are separated to form a Nanobody.
- FR1 is selected from the amino acid sequence shown in SEQ ID NO:16, or SEQ ID NO:20, or SEQ ID NO:23, or SEQ ID NO:26.
- FR1 is selected from sequences having at least one, two, three, four or five conservative amino acid substitutions compared to SEQ ID NO: 16, 20, 23, 26.
- FR2 is selected from the amino acid sequence shown in SEQ ID NO:17, or SEQ ID NO:21, or SEQ ID NO:24.
- FR2 is selected from sequences having at least one, two, three or four conservative amino acid substitutions compared to SEQ ID NO: 17, 21, 24.
- FR3 is selected from the amino acid sequence shown in SEQ ID NO:18, or SEQ ID NO:22, or SEQ ID NO:25, or SEQ ID NO:27.
- FR3 is selected from sequences having at least one, two, three, four, five or six conservative amino acid substitutions compared to SEQ ID NO: 18, 22, 25 or 27.
- FR4 is selected from the amino acid sequence shown in SEQ ID NO: 19, or compared with the sequence shown in SEQ ID NO: 19, a sequence with one, two or three conservative amino acid substitutions. Conservative amino acid substitutions mentioned in the FR regions are preferentially replaced by human framework region sequences.
- amino acid sequences of each framework region shown are shown in Table 2 below:
- provided Nanobodies comprise, in addition to the CDR regions, framework regions FR.
- the framework region FR is selected from: (1) FR1 is the amino acid sequence shown in SEQ ID NO:16, FR2 is the amino acid sequence shown in SEQ ID NO:17, FR3 is the amino acid sequence shown in SEQ ID NO:18 and FR4 is the amino acid sequence shown in SEQ ID NO:19; or (2) FR1 is the amino acid sequence shown in SEQ ID NO:20, FR2 is the amino acid sequence shown in SEQ ID NO:21, and FR3 is SEQ ID NO:22 The amino acid sequence shown and FR4 are the amino acid sequence shown in SEQ ID NO:19; or (3) FR1 is the amino acid sequence shown in SEQ ID NO:23, FR2 is the amino acid sequence shown in SEQ ID NO:24, FR3 The amino acid sequence shown in SEQ ID NO:25 and FR4 are the amino acid sequence shown in SEQ ID NO:19; or (4) FR1 is the amino acid sequence shown in SEQ ID
- the present invention provides an anti-PD-L1 nanobody comprising the amino acid sequence shown in SEQ ID NO:4.
- an anti-PD-L1 Nanobody is provided, comprising the amino acid sequence shown in SEQ ID NO:8.
- an anti-PD-L1 Nanobody is provided, comprising the amino acid sequence shown in SEQ ID NO:12.
- an anti-PD-L1 Nanobody is provided, comprising the amino acid sequence shown in SEQ ID NO:13.
- an anti-PD-L1 Nanobody is provided, comprising the amino acid sequence shown in SEQ ID NO:15.
- amino acid sequences of the provided anti-PD-L1 Nanobodies are shown in Table 3 below.
- the anti-PD-L1 nanobody has and SEQ ID NO: 4, SEQ ID NO: 8, SEQ ID NO: 12, SEQ ID NO: 13, or SEQ ID NO: 15 respectively Compared with the amino acid sequence, the homology is more than 85%, more than 86%, more than 87%, more than 88%, more than 89%, more than 90%, more than 91%, more than 92%, more than 93%, more than 94%, 95% or more, 96% or more, 97% or more, 98% or more, or 99% or more amino acid sequences.
- the provided anti-PD-L1 nanobody has at least One conservative amino acid substitution, for example having 1 conservative amino acid substitution, 2 conservative amino acid substitutions, 3 conservative amino acid substitutions, 4 conservative amino acid substitutions, 5 conservative amino acid substitutions, 6 conservative amino acid substitutions, 7 conservative amino acid substitutions, 8 conservative amino acid substitutions, Conservative amino acid substitutions, 9 conservative amino acid substitutions or 10 conservative amino acid substitutions.
- the mentioned conservative amino acid substitutions occur preferentially in the framework regions.
- the provided anti-PD-L1 Nanobodies can also be humanized Nanobodies.
- Humanized Nanobodies are less immunogenic while retaining the binding activity of Nanobodies to PD-L1.
- the provided humanized Nanobodies retain the amino acid sequences of the CDR regions and replace the FR framework regions with humanized framework region sequences.
- the FR framework region sequences of the provided humanized Nanobodies comprise partially humanized framework region sequences.
- the mentioned partially humanized framework region sequence can be obtained by replacing the framework region sequence with a humanized framework region sequence, and performing back mutations on key amino acids that affect the structure and function of the antibody.
- Humanized Nanobodies can be obtained by methods commonly used in the art (eg CDR grafting).
- Human framework region sequences can be obtained from published human sequences. For example, through database comparison and computer homology modeling, the human FR region template with the greatest homology is found, and the key residues in the FR region that need to be back-mutated are determined comprehensively to obtain high-affinity humanized antibodies. These sequences are usually recorded in commonly used databases, such as PDB protein structure database, IMGT, Genebank and other databases. Humanized nanobodies can be further back-mutated to retain some properties of the original sequence, such as affinity and physiological activity. Most of these back mutations occurred in the FR2 framework region and FR3 framework region. For example, a back mutation occurs at position 2, position 10, position 11, or position 12 of the FR2 region. Another example is a back mutation at position 10, position 12, position 13, position 21, position 29, or position 32 of the FR3 region.
- the humanized Nanobody is set forth in SEQ ID NO:28, SEQ ID NO:29, SEQ ID NO:30, SEQ ID NO:31 or SEQ ID NO:32.
- the provided humanized nanobodies have low immunogenicity and high affinity to PD-L1.
- the present invention also provides an anti-PD-L1 nanobody, selected from: i) having such as SEQ ID NO: 4, or SEQ ID NO: 8, or SEQ ID NO: 12, or SEQ ID NO: 13, or SEQ ID NO: 15, or SEQ ID NO: 28, or SEQ ID NO: 29, or SEQ ID NO: 30, or the amino acid sequence shown in SEQ ID NO: 31 or SEQ ID NO: 32; or ii) and i)
- the homology is more than 85%, more than 86%, more than 87%, more than 88%, more than 89%, more than 90%, more than 91%, more than 92%, more than 93%, more than 94%, more than 95% , more than 96%, more than 97%, more than 98%, or more than 99% of the amino acid sequences.
- the present invention also provides a fusion protein, which includes: a first domain, the first domain is the above-mentioned anti-PD-L1 nanobody; and a second domain, the second structure Domains are functional proteins distinct from anti-PD-L1 Nanobodies.
- the first domain and the second domain may be connected directly or via a linker.
- the fusion protein has the characteristics of anti-PD-L1 antibody and the activity of functional protein. It can not only be used to prepare immune targeting drugs, but also can be widely used in immunodiagnosis, antibody purification, and quantitative analysis of antibodies and antigens.
- linkers are linkers commonly used in the art, which may be some oligopeptides or polypeptides. These oligopeptides or polypeptides can be any amino acid sequence that provides flexibility. ⁇ :GS ⁇ SG ⁇ GGS ⁇ GSG ⁇ SGG ⁇ GGG ⁇ GGGS ⁇ SGGG ⁇ GGGGS ⁇ GGGGGSGS ⁇ GGGGS ⁇ GGGGSGGGGS ⁇ GGGGSGGGGSGGGGGGSGGGGSGGGGGGS ⁇ GGGGSGGGGSGGGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGSGGGS ⁇ ; GSGGGSGGGSGGGSGGGSGGGSGGGS ⁇ ; GSGGGSGGGSGGGSGGGSGGGS ⁇ ; ⁇ :
- the second domain can be linked to the C-terminal (carboxy-terminal) amino acid of the first domain.
- the second structural domain can be one or more functional proteins.
- the C-terminal of the first structural domain When the C-terminal of the first structural domain is connected to a functional protein molecule, it can also bind to one or several functional protein molecules as needed, and can pass through the C-terminal An amino acid or an N-terminal amino acid (amino terminal) binds to one of the functional protein molecules.
- the second domain can be an immunoglobulin Fc region, for example, it can be a human immunoglobulin Fc region.
- Nanobodies lack the Fc domain and do not have ADCC or CDC activity. Protein fusion of nanobody and immunoglobulin Fc region can enhance the ADCC or CDC function of nanobody and prolong the half-life of the drug in vivo.
- the second domain can also be a cytokine.
- Cytokines mentioned include, but are not limited to, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-12, IL-13, IL-15, IL-14, IL-18, IL-21, IFN- ⁇ , TNF, TGF- ⁇ , GM-CSF, etc., one or more of these cytokines can be connected to the first domain , to form a fusion protein.
- the cytokine is linked to the C-terminal amino acid of the first domain.
- the second domain can also be an antigen targeting protein other than PD-L1.
- Nanobodies are small in size and high in stability, and can easily form bispecific antibodies or multispecific antibodies with other antigen-targeting proteins, such as anti-PD-1, anti-PD-L1, anti-EGFR, anti-c-Met , Anti-TIM-3, Anti-LAG-3, Anti-CD-47, Anti-TIGIT, Anti-CD-39, Anti-CD-73, Anti-41BB, Anti-OX40, Anti-CD-3, Anti-CD-40, Anti-GARP-TGF- ⁇ Complex, anti-TGF- ⁇ , anti-GARP, anti-Her2, anti-Her3, anti-CTLA-4, anti-GARP-TGF- ⁇ complex and other antigen-targeting proteins to prepare bi- and multi-specific antibodies to prepare more antigen-targeting proteins functional antibodies.
- Nanobodies can be coupled with diagnostic reagents (such as radionuclides or optical tracers, etc.) to achieve specific tumor imaging.
- Fusion proteins can be prepared by methods commonly used in the art. For example, fusion proteins can be prepared by means of genetic engineering techniques. The gene encoding the first structural domain and the second structural domain are connected through a linker sequence, and the obtained connection product is cloned into a vector, and expressed through a prokaryotic or eukaryotic expression system.
- the anti-PD-L1 Nanobodies or fusion proteins mentioned herein are substantially pure.
- the said substantially pure means that the purity of the produced anti-PD-L1 nanobody can reach more than 90%, more than 91%, more than 92%, more than 93%, more than 94%, more than 95%, more than 96%, More than 97%, more than 98%, more than 99%, more than 99.5% and so on.
- the present invention also provides an antibody conjugate, the antibody conjugate comprising the anti-PD-L1 nanobody or fusion protein; and the anti-PD-L1 nanobody or the fusion protein linked functional small molecules.
- the mentioned functional small molecules may be developed or undeveloped small molecule drugs.
- Nanobodies have good solubility and high stability, and are suitable for chemical coupling with small molecule drugs.
- Nanobodies and small molecule drugs are coupled to form nanobody drug conjugates, which can enhance the therapeutic effect of antitumor drugs and reduce adverse reactions.
- small molecules such as toxins, chemotherapeutic drugs, and photosensitizers can be coupled to Nanobodies through linkers.
- antibody Protac conjugates can also be obtained by coupling antibodies with protac molecules, such as linking antibodies and protease targeting ligands (such as E3 ligase ligands) through linkers, to bring the target protein and intracellular
- protac molecules such as linking antibodies and protease targeting ligands (such as E3 ligase ligands) through linkers.
- protease targeting ligands such as E3 ligase ligands
- the distance between E3 ubiquitin ligases utilizes the ubiquitin-proteasome pathway to specifically degrade target proteins.
- the present invention also provides an isolated polynucleotide, which encodes the above-mentioned anti-PD-L1 nanobody or encodes the fusion protein.
- An isolated polynucleotide can be DNA, RNA, or cDNA, among others.
- the polynucleotide sequence encoding anti-PD-L1 nanobody or fusion protein can be obtained according to the routine methods of those skilled in the art.
- the present invention also provides a construct comprising the isolated polynucleotide mentioned herein.
- a variety of methods commonly used in the art can be used to obtain constructs, for example, through in vitro recombinant DNA technology, DNA synthesis technology, in vivo recombination technology, etc., for example, polynucleotides can be inserted into the multiple cloning sites of expression vectors to form constructs .
- the construct may contain various operators such as promoters, terminators, and marker genes as necessary, and these operators are operably linked to the polynucleotide.
- the promoter is usually used to provide a signal to start transcription.
- the promoter can choose lactose promoter (Lac), Trp promoter, Tac promoter, phage PL and PR promoter according to the needs; the terminator provides the signal for transcription termination during transcription. Signaling, marker genes on constructs are often used for screening. Of course, there can also be an enhancer as needed to enhance the expression of the protein.
- the expression vector is not particularly limited, and may be some commercially available expression vectors, or artificially modified expression vectors such as plasmids, phages, viruses, etc.
- the virus may be a plant cell virus, a mammalian cell virus, or the like.
- the constructs can express antibodies or proteins in vitro, and can also be transferred into cells to express antibodies or proteins.
- the present invention also provides a host cell containing the above-mentioned isolated polynucleotide or the above-mentioned construct.
- Any cell suitable for expression of a polynucleotide or construct for antibody or protein can be used as a host cell.
- the host cells may be prokaryotic cells, such as bacterial cells, or eukaryotic cells, such as yeast cells, mammalian cells, etc. Commonly used host cells can be yeast cells, CHO, HEK-293, COS cells, insect cells of Drosophila S2 or Sf9.
- Host cells containing polynucleotides or constructs can be obtained by methods commonly used in the art, such as microinjection, electroporation, chemical transfection, virus-mediated transformation, and the like.
- the present invention also provides a method for producing a nanobody or a fusion protein, comprising: cultivating the host cell mentioned in the present invention; and collecting the nanobody or fusion protein. After the collected Nanobody or fusion protein is purified, a substantially pure Nanobody or fusion protein product can be obtained.
- the said substantially pure means that the purity of the produced anti-PD-L1 nanobody can reach more than 90%, more than 91%, more than 92%, more than 93%, more than 94%, more than 95%, more than 96%, More than 97%, more than 98%, more than 99%, more than 99.5% and so on.
- the present invention also provides a pharmaceutical composition, comprising the anti-PD-L1 nanobody, or the fusion protein, or antibody conjugate; and a pharmaceutically acceptable carrier.
- the mentioned pharmaceutically acceptable carrier is acceptable to the subject at the dose or concentration used.
- Pharmaceutically acceptable carriers include, but are not limited to: buffers or salts, such as Tris, phosphate, citrate, sodium acetate, citric acid, sodium citrate, and other organic acids; antioxidants, such as ascorbic acid; preservatives For example benzalkonium chloride; amino acids such as histidine, histidine hydrochloride, glycine, glutamine, asparagine, arginine or lysine.
- the pharmaceutical preparations used in the body of the subject are generally sterile, and the sterile pharmaceutical preparations can be obtained by using methods commonly used in the art, for example, they can be obtained by filtering through sterile membranes.
- Those skilled in the art can select appropriate pharmaceutically acceptable carriers according to the prepared dosage form of the pharmaceutical composition to prepare different dosage forms, for example, various dosage forms such as injections, freeze-dried preparations, tablets, etc. can be prepared.
- the present invention also provides a kit, which includes the above-mentioned Nanobody, or the above-mentioned fusion protein, or antibody conjugate.
- the kit may also include containers, buffer reagents, controls such as positive controls and negative controls as needed. Those skilled in the art can make corresponding selections as needed.
- the kit may also include instructions for use, so as to facilitate the operation and use of those skilled in the art.
- the present invention further provides a method for preventing and/or treating diseases, comprising: administering to a subject a preventive and/or therapeutically effective amount of the above-mentioned anti-PD-L1 nanobody, or fusion protein, or antibody conjugate.
- references to a “therapeutically effective amount” is capable of resulting in a decrease in the severity of disease symptoms, an increase in the frequency and duration of asymptomatic periods of the disease, or a reduction in the prevention of suffering due to the disease.
- a “prophylactically effective amount” will generally be lower than a therapeutically effective amount.
- the provided anti-PD-L1 nanobody has an inhibitory rate of more than 10%, more than 15%, more than 20%, and 25% More than 30%, more than 40%, more than 45%, more than 50%, more than 55%, more than 60%, more than 65%, more than 70%, more than 75%, more than 80%, more than 85%, even 90% % or more or 95% or more.
- the subject referred to may be either an animal or a human. For example, it may be mammals, including cattle, sheep, mice, horses and the like.
- anti-PD-L1 nanobody or fusion protein or antibody conjugate can treat various diseases, especially cancer, including but not limited to non-small cell lung cancer (NSCLC), melanoma, urothelial carcinoma, hepatocellular carcinoma, renal Cell carcinoma, classical Hodgkin's lymphoma, cervical cancer, head and neck squamous cell carcinoma, bladder cancer, lung cancer, nasopharyngeal cancer, gastric cancer, esophageal cancer, colorectal cancer, breast cancer, ovarian cancer, etc.
- NSCLC non-small cell lung cancer
- melanoma melanoma
- urothelial carcinoma hepatocellular carcinoma
- renal Cell carcinoma classical Hodgkin's lymphoma
- cervical cancer cervical cancer
- bladder cancer lung cancer
- nasopharyngeal cancer gastric cancer
- esophageal cancer colorectal cancer
- breast cancer breast cancer
- ovarian cancer etc.
- PD-1 antibody CTLA-4 antibody, EGFR antibody, c-Met antibody, CD-40 antibody, CD-3 antibody, CD70 antibody, TIGIT antibody, CD-39 antibody, OX40 antibody, TGF ⁇ antibody, GARP antibody , Her2 antibody, c-Met antibody, LAG-3 antibody, Tim-3 antibody, 4-1BB antibody, etc. in combination to enhance the therapeutic effect on cancer.
- the provided antibodies can be administered at a therapeutically effective dose of about 0.01 mg/kg to about 100 mg/kg, for example, 0.1 mg/kg to 100 mg/kg, 1 mg/kg to 100 mg/kg, 5 mg/kg to 90 mg/kg, 10 mg/kg kg to 80mg/kg, 10mg/kg to 70mg/kg, 10mg/kg to 60mg/kg, 10mg/kg to 50mg/kg, 10mg/kg to 40mg/kg, 10mg/kg to 35mg/kg, 15mg/kg to 30mg/kg, 20mg/kg to 30mg/kg, 15mg/kg to 25mg/kg.
- the dosage administered may vary over the course of the treatment.
- the dosage administered can be varied in light of the subject's response during the course of treatment.
- the provided anti-PD-L1 nanobody or fusion protein can also be combined with a variety of clinical treatment options, such as chemotherapy, radiotherapy, anti-angiogenic therapy, surgery, etc., to improve the healing effect on tumors.
- clinical treatment options such as chemotherapy, radiotherapy, anti-angiogenic therapy, surgery, etc.
- radiotherapy can be used to destroy tumors with a larger burden, combined with immunotherapy to achieve the pursuit and interception of tiny tumors, so that the killing of tumor cells can be maximized.
- the present invention also provides the use of anti-PD-L1 nanobody or fusion protein or antibody conjugate in the preparation of medicine or kit.
- the provided anti-PD-L1 nanobody or fusion protein or antibody conjugate can be prepared into a medicine for preventing or treating various diseases. It can also be used to prepare kits and used as reagent components in kits for the diagnosis of specific antigens.
- the anti-PD-L1 nano library was obtained by alpaca immunization, and screening and identification were carried out at the same time to obtain candidate nanobodies.
- fusion protein composed of human PD-L1 protein ectodomain sequence and human immunoglobulin Fc region sequence with Freund's adjuvant, emulsify, immunize healthy alpaca, and stimulate B cells to express antigen-specific nanobodies. Then alpaca blood was collected, lymphocytes were separated, total RNA was extracted by Trizol method, cDNA was obtained by reverse transcription, and VHH antibody gene fragment was obtained by PCR amplification from the reverse transcribed cDNA.
- yeast homologous recombinase will connect the fragments to the vectors to form a complete plasmid, and establish a library of yeast transformants with high insertion rate and excellent diversity, and culture them under auxotrophic conditions. Maintain a stable passage in the base.
- the yeast cells expressing the antibody were co-incubated with the magnetic beads enriched with the target protein antigen, and after multiple enrichment cultures, the enriched products of the magnetic beads were identified by flow cytometry and sorted. After multiple rounds of screening, five highly expressed positive clones were screened and named Antibody 1 to Antibody 5, respectively.
- the amino acid sequence of antibody 1 is shown in SEQ ID NO: 4, and analyzed by IMGT/DomainGapAlign tool, its CDR regions are SEQ ID NO: 1, 2 and 3; the amino acid sequence of antibody 2 is shown in SEQ ID NO: 8, its CDR regions are respectively SEQ ID NO: 5, 6 and 7; the amino acid sequence of antibody 3 is shown in SEQ ID NO: 12, and its CDR regions are respectively SEQ ID NO: 9, 10 and 11; antibody 4
- the amino acid sequence of antibody 5 is shown in SEQ ID NO:13, and its CDR regions are respectively SEQ ID NO:9, 10 and 11; the amino acid sequence of antibody 5 is shown in SEQ ID NO:15, and its CDR regions are respectively SEQ ID NO: 1, 2 and 14.
- the obtained different antibodies are expressed and purified using a mammalian cell system to obtain antibodies with a purity of at least 90%.
- the binding activity of different antibodies and different antigens was then determined.
- Roche's atezolizumab (Tecentriq) was used as a positive control, and the positive controls mentioned in the following examples all used atezolizumab.
- MDA-MB-231 cells ATCC
- PD-L1 antigen endogenously expressing PD-L1 antigen were added to 96-well plates at 1 ⁇ 105 cells/well.
- Antibody samples of different concentrations were then added (initial concentration was 50 nM, 5-fold serial dilution), and incubated at 4°C for 30 minutes.
- a fluorescently labeled goat anti-human IgG secondary antibody manufactured by the manufacturer's
- the antibody-antigen binding dose-response curve was generated using geometric values, and the four-parameter raw data was plotted using Graphpad Prism V6.0 software to determine the EC50 value of antibody binding antigen. The results are shown in Table 5.
- the mean fluorescence intensity (MFI) values obtained as a function of antibody concentration are shown in Figure 1.
- the experimental results showed that: the binding activity of antibody 1 to antibody 5 at the cell level was similar to that of the positive control, showing high binding activity.
- Cynomolgus/Rhesus macaque PD-L1-hFc protein (manufacturer: ACRO Biosystems) was coated on a 96-well microtiter plate and incubated overnight at 4°C. Wash with washing buffer, and then add 2% BSA in PBS solution to block for 60 minutes. After washing with washing buffer, different concentrations of the antibody to be tested (initial concentration 100 nM, 4-fold serial dilution) were added, and incubated at 37°C for 120 minutes. Wash with washing buffer, then add HRP-labeled goat anti-human secondary antibody (1:10000 dilution, manufacturer: Jackson), and incubate at 37°C for 60 minutes.
- Antibody 5 0.034 hIgG1 not combined positive control 0.094
- antibodies 1 to 5 can bind to Cyno PD-L1, showing high binding activity.
- 1ug/ml mouse PD-L1-hFc protein (manufacturer: ACRO Biosystems) was coated on a 96-well microtiter plate and incubated overnight at 4°C. Wash with washing buffer, add PBS solution containing 2% BSA to block for 60 minutes. After washing with washing buffer, different concentrations of the antibody to be tested (initial concentration 100 nM, 4-fold serial dilution) were added, and incubated at 37° C. for 120 minutes. Wash with washing buffer, then add HRP-labeled goat anti-human secondary antibody (1:10000 dilution), and incubate at 37°C for 60 minutes. Wash with washing buffer, add 100ul of TMB chromogenic solution to each well, react at room temperature for 10-15 minutes, add 100ul of 2M hydrochloric acid stop solution to stop the reaction, and read the OD450 value with a microplate reader.
- Example 3 measured the blocking activity of the antibody against PD-1/PD-L1 or the blocking activity against CD-80/PD-L1.
- the blocking effect of the antibody on PD-1 and its ligand PD-L1 was detected by a method based on competitive flow cytometry. Resuscitate the 293T-PD-1 cell line overexpressing PD-1 (manufacturer: Kangyuan Bochuang Biotechnology (Beijing) Co., Ltd.), spread the cells in a 96-well plate at 1 ⁇ 10 5 cells/well, and mix different concentrations of Antibody dilution solution (starting working concentration is 200nM, 4-fold dilution) and PD-L1-Biotin dilution solution (2ug/ml, 50ul/well) were mixed and incubated at room temperature for 30 minutes.
- starting working concentration is 200nM, 4-fold dilution
- PD-L1-Biotin dilution solution 2ug/ml, 50ul/well
- the antibody-antigen blocking reaction curve was generated using geometric values, and a four-parameter graph was drawn using Graphpad Prism V6.0 software to determine the IC50 value, as shown in Table 7 below.
- Figure 3 shows the mean fluorescence intensity (MFI) results obtained as a function of antibody concentration.
- the blocking effect of the antibody on PD-L1 and CD-80 was detected by a method based on competitive flow cytometry. Resuscitate the 293T-PD-L1 cell line overexpressing PD-L1 (manufacturer: Kangyuan Bochuang Biotechnology (Beijing) Co., Ltd.), spread the cells in a 96-well plate at 1 ⁇ 10 5 per well, and mix different concentrations of Antibody diluent (initial working concentration: 200nM, 4-fold dilution) was added to the cells, and incubated at 4°C for 60 minutes. After incubation, wash with PBS containing 2% FBS, centrifuge at 1200 rpm for 4 minutes, and discard the supernatant.
- Antibody diluent initial working concentration: 200nM, 4-fold dilution
- the antibody-antigen blocking reaction curve was generated using geometric values, and a four-parameter graph was drawn using Graphpad Prism V6.0 software to determine the IC50 value, as shown in Table 8 below.
- Figure 4 shows the mean fluorescence intensity (MFI) results obtained as a function of antibody concentration.
- Example 4 Study antibody blocking of PD-1/PD-L1 pathway by reporter gene experiment.
- the experiment consists of two genetically engineered cell lines: Jurkat-PD1-CD3zeta-NFAT-Luc2 is the effector cell (manufacturer: Kangyuan Bochuang Biotechnology (Beijing) Co., Ltd.), which stably expresses PD-1ECD and CD in Jurkat cells
- the fusion protein composed of -3zeta is inserted with the luciferase reporter gene driven by T cell activation factor (NFAT); 293T-hPD-L1 cells (manufacturer: Kangyuan Biotech (Beijing) Co., Ltd.), 293T cells expressing human PD-L1.
- the interaction of PD-1/PD-L1 acts as the first signal, and the intracellular CD3zeta chain acts as the second signal to transmit the activation signal inwardly, and the NFAT-driven luciferase reporter gene is expressed and emits fluorescence ;
- the combination of PD-1/PD-L1 is blocked, the transmission of activation signal is inhibited, and the luciferase reporter gene cannot be expressed.
- 293T-hPD-L1 cells were plated in 96-well plates at 2 ⁇ 10 4 cells/well, and Jurkat-PD1-CD3zeta-NFAT-Luc2 effector cells were added to 96-well plates at 2 ⁇ 10 4 cells/well; Then different concentrations of the antibody to be tested (initial concentration 60ug/ml, 4-fold serial dilution) were added and incubated overnight at 37°C. Add 100 ul luciferase substrate ONE-Glo TM Luciferase Assay system detection reagent (Promega) to each well, and incubate for 5 minutes in the dark. A microplate reader reads the fluorescent signal in the 96-well plate.
- the CDR-Grafting Method is used to obtain humanized antibodies. This method divides the amino acid sequences of the antibody and the template into FR regions and CDR regions, and then grafts the CDR regions to the FR regions of the template, so that The CDR region that determines the specificity of the antibody and the framework region of the human antibody are combined to achieve the purpose of humanization. At the same time, in order to avoid the decrease of antibody affinity, the key amino acid residue positions are calculated by computer simulation and other technologies, and the method of reverse mutation is used to ensure the affinity of humanized antibodies.
- the humanized sequence number of Antibody 1 was Antibody 1hu, and the amino acid sequence was shown in SEQ ID NO:28.
- the humanized sequence number of Antibody 2 is Antibody 2hu, and the amino acid sequence is shown in SEQ ID NO:29.
- the humanized sequence number of Antibody 3 is Antibody 3hu, and the amino acid sequence is shown in SEQ ID NO:30.
- a humanized sequence of antibody 4 is numbered as antibody 4hu1, and its amino acid sequence is shown in SEQ ID NO:31; another sequence of humanized antibody 4 is numbered as antibody 4hu2, and its amino acid sequence is shown in SEQ ID NO:32.
- Example 6 the activity of the humanized antibody prepared in Example 5 was determined.
- the binding activity of the humanized antibody to PD-L1 was detected by flow cytometry.
- the MC38-hPD-L1 cell line overexpressing human PD-L1 (manufacturer: Kangyuan Bochuang Biotechnology (Beijing) Co., Ltd.) was revived, and the cells were spread in a 96-well plate at 1 ⁇ 10 5 per well.
- Different concentrations of the antibody to be tested were added (the initial concentration was 100 nM, and a 5-fold serial dilution was performed), and incubated at 4° C. for 30 minutes.
- a fluorescently labeled goat anti-human IgG secondary antibody (manufacturer: abcam, catalog number: 98596) was added to detect the antibody bound to the cell surface.
- the geometric values were used to generate antibody-antigen binding dose-response curves, and the original data of four parameters were drawn using Graphpad Prism V6.0 software to determine the EC50 value of antibody binding antigen, as shown in Table 10
- the experimental results showed that the humanized antibody showed good binding activity to the antigen.
- the humanized antibody was tested to block the binding effect of PD-L1 and its ligand PD-1.
- 293T-hPD1 cells were plated in 96-well plates at 1 ⁇ 10 5 per well, and different concentrations of the antibody to be tested (the initial working concentration was 200nM, diluted 4 times) and PD-L1-Biotin dilution (2ug/ml ,50ul/well) mixed and incubated at room temperature for 30 minutes. Then the mixture was added to the cells at 100ul per well, mixed evenly, and incubated at 4°C for 60 minutes, and the blocking activity of the antibody was detected with a PE fluorescent-labeled streptavidin flow-type antibody. Measure its mean fluorescence value. Next, the antibody-antigen blocking reaction curve was generated using geometric values, and a four-parameter graph was drawn using Graphpad Prism V6.0 software to determine the IC50 value, as shown in Table 11 below.
- the experimental results show that the humanized antibody can block the binding activity of PD-1/PD-L1.
- the humanized antibody can better block the binding of the antigen to CD-80.
- mice When the tumor volume reached 75-100mm 3 , the mice were divided into groups, 6 mice in each group, and given different drug treatments. They were divided into antibody 1 experimental group, antibody 2 experimental group, antibody 3 experimental group, antibody 4 experimental group, antibody 5 experimental group and vehicle group (PBS); correspondingly, mice in each treatment group were given different drugs.
- the dosage is 3 mg/kg
- the volume of administration is 5 ⁇ L/g
- the route of administration is intraperitoneal injection (ip)
- the frequency of administration is twice a week (BIW). Tumor and body weight changes of the mice were recorded.
- the results shown in FIG. 6 show the effects of the antibody 1 to antibody 5 experimental groups and the vehicle group on the tumor volume of mice.
- plural means at least two, such as two, three, etc., unless otherwise specifically defined.
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Abstract
Description
| 序列编号 | 氨基酸序列 |
| SEQ ID NO:1 | GRSFSSSG |
| SEQ ID NO:2 | INSSGGDT |
| SEQ ID NO:3 | AAKEGGGPSSIPAIYDY |
| SEQ ID NO:5 | GFTFSSYA |
| SEQ ID NO:6 | INTGSEIV |
| SEQ ID NO:7 | ATGLVSAEHDGI |
| SEQ ID NO:9 | GRDFLTYG |
| SEQ ID NO:10 | INWSGSMT |
| SEQ ID NO:11 | AARRGAVTYASSNEYEH |
| SEQ ID NO:14 | AAKEGGGPSSIPAIFDY |
| 序列编号 | 氨基酸序列 |
| SEQ ID NO:16 | QVQLVESGGGLVQAGGSLRLSCAAS |
| SEQ ID NO:17 | MGWFRQAPGKDREFVAT |
| SEQ ID NO:18 | YYRDSVEGRFTTSRDNAKNTMSLQMNDLKPEDTAVYYC |
| SEQ ID NO:19 | WGQGTQVTVSS |
| SEQ ID NO:20 | QVQLVESGGGLVQPGGSLSLSCVAS |
| SEQ ID NO:21 | MRWVRQAPGKEPEWVAG |
| SEQ ID NO:22 | VYANSVRGRFAISRDNARDTLFLQMNSLKPEDTAVYYC |
| SEQ ID NO:23 | EVQLVESGGGSVQTGGSLRLSCVAS |
| SEQ ID NO:24 | MGWFRQAPGKEREFVAS |
| SEQ ID NO:25 | YYADSVKGRFTISRDNAKNTVYLQMNSLKPGDTAVYIC |
| SEQ ID NO:26 | EVQLVESGGGLVQAGDSLRLSCTAS |
| SEQ ID NO:27 | YYADSVEGRFTTSRDNAKNTMSLQMNDLKPEDTAVYYC |
| EC50(nM) | |
| 抗体1 | 0.089 |
| 抗体2 | 0.031 |
| 抗体3 | 0.042 |
| 抗体4 | 0.039 |
| 抗体5 | 0.053 |
| hIgG1 | 不结合 |
| 阳性对照 | 0.059 |
| EC50(nM) | |
| 抗体1 | 0.133 |
| 抗体2 | 0.136 |
| 抗体3 | 0.040 |
| 抗体4 | 0.034 |
| 抗体5 | 0.034 |
| hIgG1 | 不结合 |
| 阳性对照 | 0.094 |
| IC50(nM) | |
| 抗体1 | 1.024 |
| 抗体2 | 2.077 |
| 抗体3 | 1.678 |
| 抗体4 | 2.103 |
| 抗体5 | 2.536 |
| hIgG1 | 无阻断 |
| 阳性对照 | 1.01 |
| 样品编号 | IC50(nM) |
| 抗体1 | 3.954 |
| 抗体2 | 3.355 |
| 抗体3 | 4.146 |
| 抗体4 | 4.757 |
| 抗体5 | 2.979 |
| 阳性对照 | 2.676 |
| hIgG1 | NA |
| 抗体编号 | IC50(nM) |
| 抗体1 | 0.378 |
| 抗体2 | 0.200 |
| 抗体3 | 0.211 |
| 抗体4 | 0.260 |
| 抗体5 | 0.305 |
| 阳性对照 | 0.489 |
| hIgG1 | NA |
| 样品编号 | EC50(nM) |
| 抗体1hu | 0.051 |
| 抗体1 | 0.041 |
| 抗体2hu | 0.18 |
| 抗体2 | 0.14 |
| 抗体3hu | 0.025 |
| 抗体3 | 0.025 |
| 抗体4hu1 | 0.18 |
| 抗体4hu2 | 0.29 |
| 抗体4 | 0.16 |
| 阳性对照 | 0.21 |
| hIgG1 | 未结合 |
| 样品编号 | IC50(nM) |
| 抗体1hu | 4.0 |
| 抗体1 | 4.2 |
| 抗体2hu | 3.4 |
| 抗体2 | 2.7 |
| 抗体3hu | 1.0 |
| 抗体3 | 1.1 |
| 抗体4hu1 | 2.6 |
| 抗体4hu2 | 12 |
| 抗体4 | 2.8 |
| 阳性对照 | 2.4 |
| hIgG1 | 无阻断 |
| 样品编号 | IC50(nM) |
| 抗体1hu | 1.8 |
| 抗体1 | 2.6 |
| 抗体2hu | 1.7 |
| 抗体2 | 1.5 |
| 抗体3hu | 3.2 |
| 抗体3 | 5.2 |
| 抗体4hu1 | 1.5 |
| 抗体4 | 1.5 |
| hIgG1 | 无阻断 |
| 阳性对照 | 3.0 |
Claims (18)
- 一种抗PD-L1纳米抗体,其特征在于,包含:(a)CDR1,所述CDR1包含选自下组的序列:SEQ ID NO:1、5和9,或者与SEQ ID NO:1、5和9相比,具有一个或者两个氨基酸取代、缺失或者增加的序列;(b)CDR2,所述CDR2包含选自下组的序列:SEQ ID NO:2、6和10,或者与SEQ ID NO:2、6和10相比,具有一个或者两个氨基酸取代、缺失或者增加的序列;以及(c)CDR3,所述CDR3包含选自下组的序列:SEQ ID NO:3、7、11和14,或者与SEQ ID NO:3、7、11和14相比,具有一个、两个或者三个氨基酸取代、缺失或者增加的序列。
- 根据权利要求1所述的抗PD-L1纳米抗体,其特征在于,包含:(1)具有CDR1为SEQ ID NO:1所示的氨基酸序列、CDR2为SEQ ID NO:2所示的氨基酸序列、CDR3为SEQ ID NO:3所示的氨基酸序列;或者(2)具有CDR1为SEQ ID NO:5所示的氨基酸序列、CDR2为SEQ ID NO:6所示的氨基酸序列、CDR3为SEQ ID NO:7所示的氨基酸序列;或者(3)具有CDR1为SEQ ID NO:9所示的氨基酸序列、CDR2为SEQ ID NO:10所示的氨基酸序列、CDR3为SEQ ID NO:11所示的氨基酸序列;或者(4)具有CDR1为SEQ ID NO:1所示的氨基酸序列、CDR2为SEQ ID NO:2所示的氨基酸序列、CDR3为SEQ ID NO:14所示的氨基酸序列。
- 根据权利要求1或2所述的抗PD-L1纳米抗体,其特征在于,还包括框架区FR,所述框架区FR包括FR1、FR2、FR3和FR4,所述FR1、FR2、FR3和FR4分别包括如下所示氨基酸序列:(1)FR1包括选自SEQ ID NO:16、SEQ ID NO:20、SEQ ID NO:23、SEQ ID NO:26,或者与SEQ ID NO:16、20、23或者26相比,具有一个、两个或者三个保守氨基酸取代的序列;(2)FR2包括选自SEQ ID NO:17、SEQ ID NO:21、SEQ ID NO:24,或者与SEQ ID NO:17、21或者24相比,具有一个、两个或者三个保守氨基酸取代的序列;(3)FR3包括选自SEQ ID NO:18、SEQ ID NO:22、SEQ ID NO:25、SEQ ID NO:27,者与SEQ ID NO:18、22、25或者27相比,具有一个、两个、三个或者四个保守氨基酸取代的序列;(4)FR4选自SEQ ID NO:19,或者与SEQ ID NO:19相比,具有一个或者两个保守氨基酸取代的序列。
- 根据权利要求1或2所述的抗PD-L1纳米抗体,其特征在于,还包括框架区FR,所述框架区FR分别包括:(1)FR1为SEQ ID NO:16所示的氨基酸序列、FR2为SEQ ID NO:17所示的氨基酸序列、FR3为SEQ ID NO:18所示的氨基酸序列和FR4为SEQ ID NO:19所示的氨基酸序列;或者(2)FR1为SEQ ID NO:20所示的氨基酸序列、FR2为SEQ ID NO:21所示的氨基酸序列、FR3为SEQ ID NO:22所示的氨基酸序列和FR4为SEQ ID NO:19所示的氨基酸序列;或者(3)FR1为SEQ ID NO:23所示的氨基酸序列、FR2为SEQ ID NO:24所示的氨基酸序列、FR3为SEQ ID NO:25所示的氨基酸序列和FR4为SEQ ID NO:19所示的氨基酸序列;或者(4)FR1为SEQ ID NO:26所示的氨基酸序列、FR2为SEQ ID NO:24所示的氨基酸序列、FR3为SEQ ID NO:25所示的氨基酸序列和FR4为SEQ ID NO:19所示的氨基酸序列; 或者(5)FR1为SEQ ID NO:16所示的氨基酸序列、FR2为SEQ ID NO:17所示的氨基酸序列、FR3为SEQ ID NO:27所示的氨基酸序列和FR4为SEQ ID NO:19所示的氨基酸序列。
- 根据权利要求1或2所述的抗PD-L1纳米抗体,其特征在于,所述抗PD-L1纳米抗体包括:(a)具有如SEQ ID NO:4、或SEQ ID NO:8、或SEQ ID NO:12、或SEQ ID NO:13或SEQ ID NO:15所示的氨基酸序列;(b)与(a)相比,同源性在85%以上、86%以上、87%以上、88%以上、89%以上、90%以上、91%以上、92%以上、93%以上、94%以上、95%以上、96%以上、97%以上、98%以上、或者99%以上的氨基酸序列。
- 根据权利要求1或2所述的抗PD-L1纳米抗体,其特征在于,所述抗PD-L1纳米抗体具有如SEQ ID NO:28、或SEQ ID NO:29、或SEQ ID NO:30、或SEQ ID NO:31或SEQ ID NO:32所示的氨基酸序列。
- 一种抗PD-L1纳米抗体,其特征在于,选自:i)具有如SEQ ID NO:4、或SEQ ID NO:8、或SEQ ID NO:12、或SEQ ID NO:13、或SEQ ID NO:15、或SEQ ID NO:28、或SEQ ID NO:29、或SEQ ID NO:30、或SEQ ID NO:31或SEQ ID NO:32所示的氨基酸序列;或者ii)与i)相比,同源性在85%以上、86%以上、87%以上、88%以上、89%以上、90%以上、91%以上、92%以上、93%以上、94%以上、95%以上、96%以上、97%以上、98%以上、或者99%以上的氨基酸序列。
- 一种融合蛋白,其特征在于,所述融合蛋白包括:第一结构域,所述第一结构域为权利要求1~7中任一项所述的抗PD-L1纳米抗体,以及第二结构域,所述第二结构域为不同于抗PD-L1纳米抗体的功能蛋白。
- 根据权利要求8所述的融合蛋白,其特征在于,所述第二结构域包括选自下列中的至少一种:1)免疫球蛋白Fc区,优选为人免疫球蛋白Fc区;2)细胞因子调控蛋白;3)不同于PD-L1抗原靶向蛋白。
- 一种抗体偶联物,其特征在于,包括:权利要求1~7中任一项所述的抗PD-L1纳米抗体或者权利要求8或9所述的融合蛋白;与所述抗PD-L1纳米抗体或者所述融合蛋白连接的功能小分子。
- 一种分离的多核苷酸,其特征在于,所述分离的多核苷酸编码权利要求1~7中任一项所述的抗PD-L1纳米抗体或者编码权利要求8或9所述的融合蛋白。
- 一种构建体,其特征在于,所述构建体含有权利要求11所述的分离的多核苷酸。
- 一种宿主细胞,其特征在于,所述宿主细胞含有权利要求11所述的分离的多核苷酸或者权利要求12所述的构建体。
- 一种生产纳米抗体或者融合蛋白的方法,其特征在于,包括:培养宿主细胞,所述宿主细胞为权利要求13所述的宿主细胞,以及从培养物中收集所述纳米抗体或者融合蛋白。
- 一种药物组合物,其特征在于,包括:权利要求1~7中任一项所述的抗PD-L1纳米抗体、或权利要求8或9所述的融合蛋白、或权利要求10所述的抗体偶联物;以及药学上可接受的载体。
- 一种试剂盒,其特征在于,包括:权利要求1~7中任一项所述的抗PD-L1纳米抗体、或权利要求8或9所述的融合蛋白、或权利要求10所述的抗体偶联物。
- 一种预防和/或治疗疾病的方法,其特征在于,包括:给予受试者预防和/或治疗有效量的权利要求1~7中任一项所述的抗PD-L1纳米抗体、或权利要求8或9所述的融合蛋白、或权利要求10所述的抗体偶联物。
- 权利要求1~7中任一项所述的抗PD-L1纳米抗体或权利要求8或9所述的融合蛋白或权利要求10所述的抗体偶联物在制备药物或试剂盒中的用途。
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| US18/294,516 US20240327518A1 (en) | 2021-08-06 | 2022-08-05 | Anti-pd-l1 nanobody and use thereof |
| CN202280007891.6A CN116547006B (zh) | 2021-08-06 | 2022-08-05 | 抗pd-l1纳米抗体及其应用 |
| EP22852325.4A EP4382166A4 (en) | 2021-08-06 | 2022-08-05 | ANTI-PD-L1 NANOBODY AND ITS USE |
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- 2022-08-05 WO PCT/CN2022/110423 patent/WO2023011614A1/zh not_active Ceased
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| CN116547006A (zh) | 2023-08-04 |
| EP4382166A4 (en) | 2025-07-09 |
| EP4382166A1 (en) | 2024-06-12 |
| US20240327518A1 (en) | 2024-10-03 |
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