[go: up one dir, main page]

WO2019188924A1 - Method for detecting bacteria in blood sample - Google Patents

Method for detecting bacteria in blood sample Download PDF

Info

Publication number
WO2019188924A1
WO2019188924A1 PCT/JP2019/012397 JP2019012397W WO2019188924A1 WO 2019188924 A1 WO2019188924 A1 WO 2019188924A1 JP 2019012397 W JP2019012397 W JP 2019012397W WO 2019188924 A1 WO2019188924 A1 WO 2019188924A1
Authority
WO
WIPO (PCT)
Prior art keywords
bacteria
sample
residue
detection method
subject
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/JP2019/012397
Other languages
French (fr)
Japanese (ja)
Inventor
正太 村田
祥央 土田
安規子 宮部
佐藤 守
一之 松下
文夫 野村
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Chiba University NUC
Original Assignee
Chiba University NUC
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Chiba University NUC filed Critical Chiba University NUC
Publication of WO2019188924A1 publication Critical patent/WO2019188924A1/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/02Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving viable microorganisms
    • C12Q1/04Determining presence or kind of microorganism; Use of selective media for testing antibiotics or bacteriocides; Compositions containing a chemical indicator therefor

Definitions

  • the present invention relates to a method for detecting the presence or absence of bacteria in a blood sample derived from a subject.
  • bacterial infections particularly severe infections such as sepsis
  • an appropriate antibacterial agent at an early stage from the viewpoint of healing of the bacterial infection and good prognosis.
  • effective antibacterial drugs are selected based on the assumption of pathogenic bacteria, and empirical treatment is given.
  • a blood culture test is performed to clarify the pathogenic bacteria, but it takes several days until the pathogenic bacteria are revealed. For this reason, it has been required to quickly identify the pathogenic bacteria and to make appropriate use of antibacterial drugs based on empirical treatment.
  • An object of the present invention is to provide a method that is excellent in simplicity and speed and can detect the presence or absence of bacteria in a blood sample with high sensitivity.
  • the present inventors filtered a subject-derived blood culture hemolyzed with ammonium chloride with a filtration membrane having a pore size that does not allow bacteria to pass through, and collected residues captured by the filtration membrane.
  • the bacteria in the residue sample obtained were analyzed using a mass spectrometer, it was found that whether or not bacteria were contained in the residue sample could be detected with high sensitivity.
  • bacteria in the blood sample can be compared with the case where the hemolysis treatment is performed using another hemolysis agent (for example, NP-40, Tween-20, Triton®X-100). It was also confirmed that it could be detected with high sensitivity.
  • the present invention has been completed based on these findings.
  • a method for detecting bacteria in a blood sample which comprises the following steps (a) to (d) (hereinafter sometimes referred to as “the present detection method”).
  • A a step of mixing a blood sample culture collected from a subject (hereinafter sometimes referred to as “subject-derived blood culture”) with ammonium chloride to obtain a hemolyzed sample;
  • B filtering the hemolyzed sample with a filter membrane having a pore size that does not allow bacteria to pass through;
  • C collecting the residue trapped on the filtration membrane after the filtration treatment to obtain a residue sample;
  • D analyzing the presence or absence of bacteria in the residue sample using a mass spectrometer;
  • the detection method according to [1], wherein the mass spectrometer is a matrix-assisted laser desorption / ionization time-of-flight mass spectrometer (MALDI-TOF MS).
  • MALDI-TOF MS matrix-assisted laser desorption / ionization time-of-flight mass
  • step (c) The detection method according to [1] or [2], wherein, in the step (c), the filtration membrane after the filtration treatment is immersed in pure water, and the residue is collected by centrifugation.
  • step (a) The detection according to any one of [1] to [3] above, wherein in step (a), the culture of the blood sample collected from the subject is not treated with a hemolytic agent other than ammonium chloride.
  • step (m) includes a step (m) of washing the filtered membrane after the filtration treatment with pure water between the step (b) and the step (c).
  • the detection method in any one of.
  • the subject is diagnosed as having a high possibility of being infected with the bacterium. And diagnosing whether or not the subject is infected with bacteria, comprising the step (p) of diagnosing that the subject is unlikely to be infected with bacteria if no bacteria are detected in the residue sample How to do; Treatment of a subject diagnosed as having a high possibility of being infected with a bacterium, comprising the steps (a) to (d) and (p), using a drug such as an antibiotic against the bacterium A method of diagnosing whether or not a subject is infected with bacteria and preventing or treating the bacterial infection, comprising the step (q) of applying treatment; Can be mentioned.
  • Blood culture tests for diagnosing sepsis are performed by culturing a blood sample collected from a subject in a culture solution, and using changes in turbidity of the blood culture, gas generation in the culture solution by bacteria, changes in pH, etc. as indicators. And confirming the presence or absence of bacterial growth for 1 to 7 days. Then, if bacterial growth is confirmed, blood culture is collected, Gram staining and subculture (secondary culture) are performed, and the antibacterial used for empirical treatment is based on the results of rough classification of bacterial species by Gram staining. Drug evaluation is performed. On the other hand, if this detection method is used, bacteria can be efficiently collected and bacterial species can be identified quickly and accurately. Leads to treatment. For this reason, this invention can contribute to improvement of the prognosis of a patient with a bacterial infection, suppression of increase of resistant bacteria, cost reduction, and the like.
  • a subject-derived blood culture is mixed with ammonium chloride to obtain a hemolyzed sample (a); a filtration membrane having a pore size that does not allow bacteria to pass through the hemolyzed sample (hereinafter simply referred to as “filtration membrane”) (B) a filtration process (b);) a step (c) of collecting the residue trapped on the filtration membrane after the filtration process to obtain a residue sample; and bacteria in the residue sample
  • the method includes steps (a) to (d) of step (d); which is analyzed (detected) using a mass spectrometer, and the detection method is derived from the subject. This method detects whether bacteria are present in the blood sample, and does not include a diagnostic action by a doctor.
  • the subject is not particularly limited, and is, for example, a person with unknown bacterial infection (for example, a healthy person; a non-bacterial infection patient such as a cancer patient or a diabetic patient), or a specific bacterium.
  • a person with unknown bacterial infection for example, a healthy person; a non-bacterial infection patient such as a cancer patient or a diabetic patient
  • a specific bacterium for example, a specific bacterium.
  • Those who are unclear for example, healthy individuals; patients with bacterial infections such as septic patients and patients with upper respiratory tract infections
  • the subject blood culture is mixed with ammonium chloride to obtain a hemolyzed sample.
  • Conditions such as temperature and time are such that red blood cells are destroyed and hemoglobin is released into the blood culture.
  • the temperature may be in the range of 10 to 37 ° C., and the treatment time may be in the range of 1 second to 1 minute, for example.
  • the method of mixing the subject-derived blood culture and ammonium chloride is not particularly limited as long as the ammonium chloride is a liquid type and the ammonium chloride is a method of stirring the entire subject-derived blood culture.
  • the method is not particularly limited as long as ammonium chloride is stirred and dissolved in the entire subject-derived blood culture.
  • the container containing the subject-derived blood culture and ammonium chloride is moved up and down one or several times.
  • the method of stirring by making it, the method of stirring 1 or several times with a stirring rod, the method of combining them, etc. can be mentioned.
  • the test subject-derived blood culture can be obtained, for example, by culturing a blood sample collected from the test subject at a culture temperature of 35 ° C. for 12 to 48 hours.
  • the ammonium chloride concentration in the subject-derived blood culture may be a concentration sufficient to destroy red blood cells and release hemoglobin into the blood culture, and is usually in the range of 50 to 500 mM, preferably Is 60-400 mM, more preferably 70-300 mM, more preferably 80-250 mM, even more preferably 100-220 mM, particularly preferably 110-200 mM, particularly more preferably 120-190 mM, and most preferably 130-180 mM. .
  • the ammonium chloride may be liquid ammonium chloride or non-liquid ammonium chloride, but liquid ammonium chloride is preferred.
  • the liquid type ammonium chloride can be prepared by dissolving a non-liquid type ammonium chloride such as a powder in a solvent (preferably a physiological aqueous solution).
  • a physiological aqueous solution may be an isotonic solution in which the concentration of salt or sugar is adjusted with sodium or potassium so as to be almost the same as the osmotic pressure of a body fluid (for example, plasma) or cell fluid.
  • isotonic solutions such as saline, phosphate buffered saline (PBS), Tris buffered saline (TBS), and HEPES buffered saline.
  • PBS phosphate buffered saline
  • TBS Tris buffered saline
  • HEPES HEPES buffered saline.
  • step (a) it is preferable not to hemolyze the subject-derived blood culture with a substance (hemolytic agent) other than ammonium chloride, because ammonium chloride alone can be effectively hemolyzed.
  • a substance (hemolytic agent) other than ammonium chloride include surfactants and hypotonic solutions.
  • surfactants examples include Triton-100X-100 (Triton is a registered trademark) (polyoxyethylene (10) octylphenyl ether), Triton X-114 (polyoxyethylene (8) octylphenyl ether), Triton X-405 ( Polyoxyethylene pt-octylphenyl ether (Triton surfactant) such as polyoxyethylene (40) isooctylphenyl ether), NP-40 (Nonidet P-40) (polyoxyethylene (9) octylphenyl ether); Polyoxyethylene sorbitan fatty acid esters (Tween surfactant) such as Tween 20 (Tween is a registered trademark), Tween 40, Tween 60, Tween 80, Tween 65, Tween 85; Briji 35 (Briji is a registered trademark) (polyoxy) Polyoxyethylene alkyl ethers (Briji surfactants) such as ethylene (2
  • hypotonic solution is not particularly limited as long as it is a hypotonic solution in which the salt or sugar concentration is adjusted with sodium or potassium so as to be lower than the osmotic pressure of a body fluid (for example, plasma) or cell fluid.
  • a body fluid for example, plasma
  • hypotonic means that the osmotic pressure is lower than 250 mOsm / L.
  • the hemolyzed sample prepared in the step (a) is transferred to a container provided with a filtration membrane and made of a material such as plastic, metal, glass, etc., and a syringe, a vacuum pump, an aspirator, Filtration by suction or pressurization using a device such as a compressor, or filtration into a centrifuge tube or test tube made of a material such as plastic, metal, glass, etc., equipped with a filtration membrane and centrifuged
  • a method of performing pressure treatment or pressure reduction by manually operating a syringe and performing filtration treatment, or filtration treatment by centrifuging is preferred.
  • the filtration treatment is preferably performed in a closed system, and the filtration membrane is preferably disposable.
  • the pore size of the filtration membrane may be any pore size that does not allow bacteria to pass through, and is usually 1.5 ⁇ m or less, preferably 1.2 ⁇ m or less, more preferably 0.8 ⁇ m or less, still more preferably 0.7 ⁇ m or less, and even more preferably.
  • the pore size of the filtration membrane used for the filtration treatment is usually within the range of 0.1 to 1.5 ⁇ m, preferably 0.2 to 1.2 ⁇ m, more preferably 0.25 to 0.8 ⁇ m, and still more preferably. It is 0.3 to 0.7 ⁇ m, even more preferably 0.35 to 0.6 ⁇ m or less, and most preferably 0.4 to 0.5 ⁇ m or less.
  • Examples of the material of the filtration membrane include cellulose mixed esters (MCE), polyvinylidene fluoride (PVDF), polytetrafluoroethylene (PTFE), hydrophilic PTFE, polyethersulfone (PES), and hydrophilic.
  • MCE cellulose mixed esters
  • PVDF polyvinylidene fluoride
  • PTFE polytetrafluoroethylene
  • PES polyethersulfone
  • hydrophilic polypropylene
  • GFP hydrophilic polypropylene
  • nylon NYL
  • CA cellulose acetate
  • PSF polysulfone
  • acrylic copolymer acrylic copolymer
  • polyamide nylon 6, 6, polyester
  • polycarbonate nitrocellulose, a mixture of nitrocellulose and cellulose ester, and the like.
  • step (c) in this detection method as a method for obtaining a residue sample, any method can be used as long as it can release and recover the residue from the filtration membrane after the filtration treatment in the step (b).
  • a part or all of the filtration membrane may be immersed in pure water to obtain a filtration membrane and / or pure water. Is preferably collected from the water containing the residue by centrifugation, and the centrifugation is preferably carried out in a closed system from the viewpoint of preventing bacterial contamination.
  • the number of washings may be at least once and may be a plurality of times (2, 3, 4 etc.), but is preferably 1 in consideration of time-effectiveness and cost-effectiveness.
  • the filtration membrane is washed by adding pure water to the filtration membrane after the filtration treatment in step (b) and passing the pure water through the filtration membrane by the same suction or pressurization method as the filtration treatment. be able to.
  • pure water means water from which impurities and ionic substances have been removed. Specifically, water having an electric conductivity of 10 ⁇ S / cm or less under a condition of 24 to 26 ° C. Means. Pure water can be prepared by distillation and / or ion exchange of tap water.
  • step (d) in this detection method As a method of analysis using a mass spectrometer, the residual sample is converted into gaseous ions using an ion source (ionization), and is moved in a vacuum in the analysis unit to use electromagnetic force.
  • an analysis method using a mass spectrometer capable of separating and detecting a residue sample ionized by a time-of-flight difference according to the mass-to-charge ratio is not particularly limited.
  • ionization using an ion source includes electron ionization (EI) method, chemical ionization (CI) method, field desorption ionization (FD) method, fast atom bombardment (FAB) method, matrix-assisted laser desorption.
  • a method such as an ionization (MALDI) method or an electrospray ionization (ESI) method can be appropriately selected.
  • a method for separating an ionized blood sample in the analysis unit a magnetic field deflection type, a quadrupole type, Separation methods such as an ion trap type, a time-of-flight (TOF) type, and a Fourier transform ion cyclotron resonance type can be appropriately selected.
  • tandem mass spectrometry combining two or more mass spectrometry methods can be used.
  • SBP and methylcysteine can be separated and purified from impurities by gas chromatography (GC), liquid chromatography (LC), and high performance liquid chromatography (HPLC).
  • GC gas chromatography
  • LC liquid chromatography
  • HPLC high performance liquid chromatography
  • MALDI-TOF MS matrix-assisted laser desorption / ionization time-of-flight mass spectrometer
  • step (d) whether or not bacteria are contained in the residue sample is prepared by preparing a sample for mass spectrometry from the residue sample and analyzing it using a mass spectrometer.
  • the analysis target in the residual sample may be any substance derived from bacteria (for example, protein, peptide, compound), and its expression level in bacteria is large; it is easily ionized; peptide fragmentation is performed using a proteolytic enzyme such as trypsin. Without being easily detected by TOFMS within a molecular weight range of about 4000-15,000 Da; mass spectral patterns capable of distinguishing bacterial types are already known for many types of bacteria; Therefore, a ribosomal protein derived from bacteria is preferable.
  • the subject can acquire data for diagnosing that there is a high possibility that the subject is infected with bacteria. If no is detected, the subject can acquire data for diagnosing that the possibility of being infected with bacteria is low. Therefore, as another embodiment of the present invention, it is diagnosed whether or not the subject is infected with bacteria, including the above steps (a) to (d), and further including the step of acquiring these data.
  • the method of collecting data for can be mentioned.
  • a crystallized sample having a humidity of 40% was also prepared.
  • CHCA ⁇ -Cyano-4-hydroxycinnamic Acid
  • Mass spectra were acquired using Flex Control software (Bruker Daltonics), and bacterial species identification based on ribosomal protein fingerprints (mass spectrum patterns) was performed using MALDI Biotyper 3.1 software (Bruker Daltonics). Made by the company).
  • score value is 2.0 or more, it is evaluated that the bacterial species level is high, and when the score value is 1.7 to less than 2.0, it is evaluated that the genus level is high, and the score value is 1 If less than .7, it was evaluated as unidentifiable.
  • the prior art detection method was performed according to the following procedures [1] to [5].
  • a 1.5 mL blood culture was placed in a sterile vacuum blood collection tube (Insepack [registered trademark] II; manufactured by Sekisui Medical Co., Ltd.) containing a plasma separating agent, and centrifuged (1710 g ⁇ 5 minutes).
  • the supernatant (plasma fraction) was removed, 1 mL of pure water was added, transferred to a 1.5 mL tube, and then centrifuged (15000 rpm ⁇ 3 minutes).
  • the identified Gram-negative and Gram-positive bacteria are shown in Tables 1 and 2, respectively.
  • the detection sensitivity of the present detection method was about 1.14 times higher than the detection sensitivity of the conventional detection method (see “ ⁇ 2.0” in Table 1).
  • the number of gram-positive bacteria evaluated as having a high match at the bacterial species level was 23 when the conventional detection method was used, while 51 when the detection method was used.
  • the detection sensitivity of the present detection method was about 2.2 times as high as the detection sensitivity of the conventional detection method (see “ ⁇ 2.0” in Table 2).
  • the detection target bacteria (Klebsiella pneumoniae) were replaced with Staphylococcus aureus and detected in the same manner.
  • the number of specimens identified at the bacterial species level (score value ⁇ 2) was 1 out of 3 specimens (see Table 4), and the mean value of the score values ⁇ standard deviation was 1.868 ⁇ 0.14, but when ammonium chloride was used, all three samples could be identified at the bacterial species level (see Table 4), and the average score value The standard deviation was 2.138 ⁇ 0.03.
  • the present invention contributes to diagnosis, early prevention or early treatment of bacterial (especially pathogenic bacteria) infections in subjects.

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Toxicology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

The problem of the present invention is to provide a highly convenient and prompt method for detecting existence of bacteria in blood samples with high sensitivity. By using a method comprising sequential processes (a) to (d), wherein the process (a) mixes a culture of a subject-originated blood sample with ammonium chloride and obtains a hemolysed sample; the process (b) filters the hemolysed sample with a filter membrane having pore diameter in which bacteria cannot be filtered; the process (c) collects residue caught on the filter membrane after filtering and obtains a residue sample; and the process (d) analyzes existence of bacteria in the residue sample by using a mass spectrometer; the matter of bacterial infection of the subject can be detected with high sensitivity.

Description

血液試料中の細菌の検出方法Method for detecting bacteria in blood samples

 本発明は、被験者由来血液試料中の細菌の有無を検出する方法に関する。 The present invention relates to a method for detecting the presence or absence of bacteria in a blood sample derived from a subject.

 細菌感染症、特に敗血症のように重度の感染症の場合、早期に適切な抗菌薬を投与することが、細菌感染症の治癒や良好な予後の面から重要である。細菌感染症に対しては、起炎菌を想定し効果のある抗菌薬を選択し、経験的治療が施される。それと同時に、起炎菌を明らかにするための血液培養検査が実施されるが、起炎菌が明らかになるまで数日間を要する。このため、迅速に起炎菌を明らかにし、経験的治療を根拠ある抗菌薬適正使用とすることが求められていた。 In the case of bacterial infections, particularly severe infections such as sepsis, it is important to administer an appropriate antibacterial agent at an early stage from the viewpoint of healing of the bacterial infection and good prognosis. For bacterial infections, effective antibacterial drugs are selected based on the assumption of pathogenic bacteria, and empirical treatment is given. At the same time, a blood culture test is performed to clarify the pathogenic bacteria, but it takes several days until the pathogenic bacteria are revealed. For this reason, it has been required to quickly identify the pathogenic bacteria and to make appropriate use of antibacterial drugs based on empirical treatment.

 最近、細菌タンパク質又は全細菌について、マトリックス支援レーザー脱離イオン化飛行時間型質量分析計(MALDI-TOF MS)を用いた質量分析法を行うと、細菌の属、種、及び株固有のバイオマーカーを生成できることが報告されている(特許文献1)。また、質量分析法を用いた細菌同定用の試験試料を調製するために、試験試料中の非細菌細胞を選択的に溶解させる方法も報告されている(特許文献2)。しかしながら、血液培養物を、塩化アンモニウムを用いて溶血処理し、その後濾過処理により得られた残渣を、細菌同定のために質量分析を行う方法や、その効果については、これまで報告されていなかった。 Recently, mass spectrometry using a matrix-assisted laser desorption / ionization time-of-flight mass spectrometer (MALDI-TOF MS) has been performed on bacterial proteins or whole bacteria. It has been reported that it can be generated (Patent Document 1). In addition, in order to prepare a test sample for bacterial identification using mass spectrometry, a method of selectively lysing non-bacterial cells in the test sample has also been reported (Patent Document 2). However, no method has been reported so far on the method of performing hemolysis of the blood culture with ammonium chloride and then performing mass spectrometry on the residue obtained by filtration for the identification of bacteria and its effects. .

米国特許第6,177,266号US Pat. No. 6,177,266 特表2012-507711号公報Special table 2012-507711 gazette

 本発明の課題は、簡便性や迅速性に優れ、かつ、血液試料中の細菌の有無を感度よく検出できる方法を提供することにある。 An object of the present invention is to provide a method that is excellent in simplicity and speed and can detect the presence or absence of bacteria in a blood sample with high sensitivity.

 本発明者らは、上記課題を解決するため、塩化アンモニウムにより溶血処理した被験者由来血液培養物を、細菌を通過させない孔径を有する濾過膜で濾過処理し、濾過膜に捕捉された残渣を回収して得られた残渣試料中の細菌を、質量分析計を用いて解析したところ、前記残渣試料中に、細菌が含まれているか否かを、感度よく検出することができることを見出した。また、上記溶血処理を、塩化アンモニウムを用いて行うと、他の溶血剤(例えば、NP-40、Tween 20、Triton X-100)を用いて溶血処理した場合と比べ、血液試料中の細菌を感度よく検出できることも確認した。本発明は、これらの知見に基づいて完成するに至ったものである。 In order to solve the above problems, the present inventors filtered a subject-derived blood culture hemolyzed with ammonium chloride with a filtration membrane having a pore size that does not allow bacteria to pass through, and collected residues captured by the filtration membrane. When the bacteria in the residue sample obtained were analyzed using a mass spectrometer, it was found that whether or not bacteria were contained in the residue sample could be detected with high sensitivity. In addition, when the above hemolysis treatment is performed using ammonium chloride, bacteria in the blood sample can be compared with the case where the hemolysis treatment is performed using another hemolysis agent (for example, NP-40, Tween-20, Triton®X-100). It was also confirmed that it could be detected with high sensitivity. The present invention has been completed based on these findings.

 すなわち、本発明は、以下のとおりである。
〔1〕以下の工程(a)~(d)を含むことを特徴とする、血液試料中の細菌の検出方法(以下、「本件検出法」ということがある)。
(a)被験者から採取された血液試料の培養物(以下、「被験者由来血液培養物」ということがある)を、塩化アンモニウムと混合し、溶血試料を得る工程;
(b)前記溶血試料を、細菌を通過させない孔径を有する濾過膜で濾過処理する工程;
(c)前記濾過処理後の濾過膜に捕捉された残渣を回収し、残渣試料を得る工程;
(d)前記残渣試料中に細菌が含まれているか否かを、質量分析計を用いて解析する工程;
〔2〕質量分析計が、マトリックス支援レーザー脱離イオン化飛行時間型質量分析計(MALDI-TOF MS)であることを特徴とする上記〔1〕に記載の検出方法。
〔3〕工程(c)において、濾過処理後の濾過膜を純水中に浸し、遠心分離により残渣を回収することを特徴とする上記〔1〕又は〔2〕に記載の検出方法。
〔4〕工程(a)において、被験者から採取された血液試料の培養物を、塩化アンモニウム以外の溶血剤で処理しないことを特徴とする上記〔1〕~〔3〕のいずれかに記載の検出方法。
〔5〕工程(b)と工程(c)の間に、濾過処理後の濾過膜を、純水を用いて洗浄する工程(m)を含むことを特徴とする上記〔1〕~〔4〕のいずれかに記載の検出方法。
That is, the present invention is as follows.
[1] A method for detecting bacteria in a blood sample, which comprises the following steps (a) to (d) (hereinafter sometimes referred to as “the present detection method”).
(A) a step of mixing a blood sample culture collected from a subject (hereinafter sometimes referred to as “subject-derived blood culture”) with ammonium chloride to obtain a hemolyzed sample;
(B) filtering the hemolyzed sample with a filter membrane having a pore size that does not allow bacteria to pass through;
(C) collecting the residue trapped on the filtration membrane after the filtration treatment to obtain a residue sample;
(D) analyzing the presence or absence of bacteria in the residue sample using a mass spectrometer;
[2] The detection method according to [1], wherein the mass spectrometer is a matrix-assisted laser desorption / ionization time-of-flight mass spectrometer (MALDI-TOF MS).
[3] The detection method according to [1] or [2], wherein, in the step (c), the filtration membrane after the filtration treatment is immersed in pure water, and the residue is collected by centrifugation.
[4] The detection according to any one of [1] to [3] above, wherein in step (a), the culture of the blood sample collected from the subject is not treated with a hemolytic agent other than ammonium chloride. Method.
[5] The above [1] to [4], wherein the step (m) includes a step (m) of washing the filtered membrane after the filtration treatment with pure water between the step (b) and the step (c). The detection method in any one of.

 また本発明の実施の他の形態として、
上記工程(a)~(d)を含み、さらに、上記工程(d)の後、前記残渣試料中に細菌が検出された場合、前記被験者は、細菌に感染している可能性が高いと診断し、前記残渣試料中に細菌が検出されない場合、前記被験者は、細菌に感染している可能性が低いと診断する工程(p);を含む、被験者が細菌に感染しているか否かを診断する方法;や、
上記工程(a)~(d)、及び(p)を含み、さらに、細菌に感染している可能性が高いと診断された被験者に対して、当該細菌に対する抗生物質等の薬剤を用いて治療処理を施す工程(q)を含む、被験者が細菌に感染しているか否かを診断し、細菌感染症を予防又は治療する方法;
を挙げることができる。
As another embodiment of the present invention,
If the bacterium is detected in the residue sample after the step (a) and further including the steps (a) to (d), the subject is diagnosed as having a high possibility of being infected with the bacterium. And diagnosing whether or not the subject is infected with bacteria, comprising the step (p) of diagnosing that the subject is unlikely to be infected with bacteria if no bacteria are detected in the residue sample How to do;
Treatment of a subject diagnosed as having a high possibility of being infected with a bacterium, comprising the steps (a) to (d) and (p), using a drug such as an antibiotic against the bacterium A method of diagnosing whether or not a subject is infected with bacteria and preventing or treating the bacterial infection, comprising the step (q) of applying treatment;
Can be mentioned.

 本件検出法において、塩化アンモニウムにより溶血処理した被験者由来血液培養物を、細菌を通過させない孔径を有する濾過膜で濾過処理すると、前記被験者由来血液培養物中に含まれる細菌は、残渣として濾過膜に捕捉されるのに対して、ヘモグロビン等の血球成分は、濾過膜を通過する。このため、上記被験者由来血液培養物中に含まれる細菌と、血球成分とを、遠心分離を行うことなく、比較的簡便に分離することができる。また、上記濾過処理は、シリンジを用いた手動操作により行うことが可能であるため、真空ポンプ等の大掛かりな機器がなくても、本件検出法を実施することができる。さらに、濾過膜に捕捉された残渣を回収して得られた残渣試料中の細菌を、質量分析計を用いて解析することにより、前記残渣試料中に、細菌が含まれているか否かを、感度よく検出することができる。このため、本件検出法を用いると、被験者が細菌(特に病原性細菌)に感染しているか否かを診断する上で有用なデータを取得することができるため、被験者における細菌感染症の診断の他、細菌感染症の早期予防や早期治療が期待される。 In this detection method, when the subject-derived blood culture hemolyzed with ammonium chloride is filtered with a filtration membrane having a pore size that does not allow bacteria to pass through, the bacteria contained in the subject-derived blood culture are left as residues in the filtration membrane. While captured, blood cell components such as hemoglobin pass through the filtration membrane. For this reason, bacteria contained in the subject-derived blood culture and blood cell components can be separated relatively easily without performing centrifugation. Moreover, since the said filtration process can be performed by manual operation using a syringe, even if there is no large apparatus, such as a vacuum pump, this detection method can be implemented. Further, by analyzing the bacteria in the residue sample obtained by collecting the residue captured by the filtration membrane using a mass spectrometer, whether or not the bacteria are contained in the residue sample, It can be detected with high sensitivity. For this reason, using this detection method, data useful for diagnosing whether or not a subject is infected with bacteria (especially pathogenic bacteria) can be obtained. In addition, early prevention and early treatment of bacterial infections are expected.

 敗血症を診断する血液培養検査は、被験者から採取された血液試料を、培養液中で培養し、血液培養物の濁度の変化、細菌による培養液中のガス発生、pHの変化等を指標にして、1~7日間、細菌増殖の有無を確認することから行われる。次いで、細菌増殖が確認された場合、血液培養物を採取し、グラム染色とサブカルチャー(二次培養)が行われ、グラム染色による大まかな細菌種の分類結果から、経験的治療に使用した抗菌薬の評価が行われる。一方、本件検出法を用いると、細菌を効率よく集菌し、細菌種同定を迅速かつ正確に行うことができるため、起炎菌の細菌種を正確に同定することが可能となり、抗菌薬適正治療につながる。このため、本発明は、細菌感染症患者の予後の改善、耐性細菌の増加抑制、コスト削減等に貢献できる。 Blood culture tests for diagnosing sepsis are performed by culturing a blood sample collected from a subject in a culture solution, and using changes in turbidity of the blood culture, gas generation in the culture solution by bacteria, changes in pH, etc. as indicators. And confirming the presence or absence of bacterial growth for 1 to 7 days. Then, if bacterial growth is confirmed, blood culture is collected, Gram staining and subculture (secondary culture) are performed, and the antibacterial used for empirical treatment is based on the results of rough classification of bacterial species by Gram staining. Drug evaluation is performed. On the other hand, if this detection method is used, bacteria can be efficiently collected and bacterial species can be identified quickly and accurately. Leads to treatment. For this reason, this invention can contribute to improvement of the prognosis of a patient with a bacterial infection, suppression of increase of resistant bacteria, cost reduction, and the like.

 本件検出法は、被験者由来血液培養物を、塩化アンモニウムと混合し、溶血試料を得る工程(a);前記溶血試料を、細菌を通過させない孔径を有する濾過膜(以下、単に「濾過膜」ということがある)で濾過処理する工程(b);)前記濾過処理後の濾過膜に捕捉された残渣を回収し、残渣試料を得る工程(c);及び前記残渣試料中に細菌が含まれているか否かを、質量分析計を用いて解析(検出)する工程(d);の工程(a)~(d)を順次含む方法であれば特に制限されず、本件検出法は、前記被験者由来の血液試料中に、細菌が存在するか否かを検出する方法であって、医師による診断行為を含まない。 In this detection method, a subject-derived blood culture is mixed with ammonium chloride to obtain a hemolyzed sample (a); a filtration membrane having a pore size that does not allow bacteria to pass through the hemolyzed sample (hereinafter simply referred to as “filtration membrane”) (B) a filtration process (b);) a step (c) of collecting the residue trapped on the filtration membrane after the filtration process to obtain a residue sample; and bacteria in the residue sample There is no particular limitation as long as the method includes steps (a) to (d) of step (d); which is analyzed (detected) using a mass spectrometer, and the detection method is derived from the subject. This method detects whether bacteria are present in the blood sample, and does not include a diagnostic action by a doctor.

 上記被験者としては、特に制限されず、例えば、細菌感染の有無が不明な者(例えば、健常者;がん患者、糖尿病患者等の非細菌感染症患者)や、特定の細菌に感染しているか否かが不明な者(例えば、健常者;敗血症患者、上気道感染症患者等の細菌感染症患者)を挙げることができる。 The subject is not particularly limited, and is, for example, a person with unknown bacterial infection (for example, a healthy person; a non-bacterial infection patient such as a cancer patient or a diabetic patient), or a specific bacterium. Those who are unclear (for example, healthy individuals; patients with bacterial infections such as septic patients and patients with upper respiratory tract infections) can be mentioned.

[本件検出法における工程(a)について]
 上記工程(a)において、被験者由来血液培養物を塩化アンモニウムと混合し、溶血試料を得るときの温度や時間等の条件としては、赤血球が破壊され、ヘモグロビンが血液培養物中に遊離されるのに十分な条件であればよく、温度としては、例えば、10~37℃の範囲内を挙げることができ、処理時間としては、例えば、1秒~1分の範囲内を挙げることができる。被験者由来血液培養物と塩化アンモニウムとを混合させる方法としては、塩化アンモニウムが液体タイプの場合、塩化アンモニウムが被験者由来血液培養物全体に撹拌する方法であれば特に制限されず、また、塩化アンモニウムが非液体タイプの場合、塩化アンモニウムが被験者由来血液培養物全体に撹拌し、溶解する方法であれば特に制限されず、例えば、被験者由来血液培養物と塩化アンモニウムを含む容器を、1又は数回上下させることにより撹拌する方法や、撹拌棒で1又は数回撹拌させる方法や、それらを組み合わせる方法等を挙げることができる。
[About step (a) in this detection method]
In the step (a), the subject blood culture is mixed with ammonium chloride to obtain a hemolyzed sample. Conditions such as temperature and time are such that red blood cells are destroyed and hemoglobin is released into the blood culture. The temperature may be in the range of 10 to 37 ° C., and the treatment time may be in the range of 1 second to 1 minute, for example. The method of mixing the subject-derived blood culture and ammonium chloride is not particularly limited as long as the ammonium chloride is a liquid type and the ammonium chloride is a method of stirring the entire subject-derived blood culture. In the case of a non-liquid type, the method is not particularly limited as long as ammonium chloride is stirred and dissolved in the entire subject-derived blood culture. For example, the container containing the subject-derived blood culture and ammonium chloride is moved up and down one or several times. The method of stirring by making it, the method of stirring 1 or several times with a stirring rod, the method of combining them, etc. can be mentioned.

 被験者由来血液培養物は、例えば、被験者から採取された血液試料を、培養温度35℃の条件下で12~48時間培養することにより得ることができる。 The test subject-derived blood culture can be obtained, for example, by culturing a blood sample collected from the test subject at a culture temperature of 35 ° C. for 12 to 48 hours.

 被験者由来血液培養物中の塩化アンモニウム濃度としては、赤血球が破壊され、ヘモグロビンが血液培養物中に遊離されるのに十分な濃度であればよく、通常、50~500mMの範囲内であり、好ましくは60~400mM、より好ましくは70~300mM、さらに好ましくは80~250mM、さらにより好ましくは100~220mM、特に好ましくは110~200mM、特により好ましくは120~190mM、最も好ましくは130~180mMである。 The ammonium chloride concentration in the subject-derived blood culture may be a concentration sufficient to destroy red blood cells and release hemoglobin into the blood culture, and is usually in the range of 50 to 500 mM, preferably Is 60-400 mM, more preferably 70-300 mM, more preferably 80-250 mM, even more preferably 100-220 mM, particularly preferably 110-200 mM, particularly more preferably 120-190 mM, and most preferably 130-180 mM. .

 上記塩化アンモニウムとしては、液体タイプの塩化アンモニウムであっても、非液体タイプの塩化アンモニウムであってもよいが、液体タイプの塩化アンモニウムが好ましい。液体タイプの塩化アンモニウムは、粉体等の非液体タイプの塩化アンモニウムを溶媒(好ましくは、生理的水溶液)中に溶解させることにより、調製することができる。かかる生理的水溶液としては、体液(例えば血漿)や細胞液の浸透圧とほぼ同じになるように、ナトリウムやカリウムなどによって塩や糖濃度等を調整した等張液であればよく、例えば、生理食塩水、リン酸緩衝化生理食塩水(PBS)、トリス緩衝化生理食塩水(TBS)、HEPES緩衝化生理食塩水などの等張液を挙げることができる。本明細書において「等張」とは、浸透圧が250~380mOsm/Lの範囲内であることを意味する。 The ammonium chloride may be liquid ammonium chloride or non-liquid ammonium chloride, but liquid ammonium chloride is preferred. The liquid type ammonium chloride can be prepared by dissolving a non-liquid type ammonium chloride such as a powder in a solvent (preferably a physiological aqueous solution). Such a physiological aqueous solution may be an isotonic solution in which the concentration of salt or sugar is adjusted with sodium or potassium so as to be almost the same as the osmotic pressure of a body fluid (for example, plasma) or cell fluid. Examples include isotonic solutions such as saline, phosphate buffered saline (PBS), Tris buffered saline (TBS), and HEPES buffered saline. In this specification, “isotonic” means that the osmotic pressure is in the range of 250 to 380 mOsm / L.

 上記工程(a)において、塩化アンモニウム単独でも効果的に溶血処理することができるため、被験者由来血液培養物を、塩化アンモニウム以外の物質(溶血剤)で溶血処理しないことが好ましい。ここで、塩化アンモニウム以外の溶血剤としては、例えば、界面活性剤、低張液等を挙げることができる。かかる界面活性剤としては、Triton X-100(Tritonは登録商標)(ポリオキシエチレン(10)オクチルフェニルエーテル)、Triton X-114(ポリオキシエチレン(8)オクチルフェニルエーテル)、Triton X-405(ポリオキシエチレン(40)イソオクチルフェニルエーテル)、NP-40(Nonidet P-40)(ポリオキシエチレン(9)オクチルフェニルエーテル)等のポリオキシエチレンp-t-オクチルフェニルエーテル(Triton系界面活性剤);Tween 20(Tweenは登録商標)、Tween 40、Tween 60、Tween 80、Tween 65、Tween 85等のポリオキシエチレンソルビタン脂肪酸エステル(Tween系界面活性剤);Briji 35(Brijiは登録商標)(ポリオキシエチレン(23)ラウリルエーテル)等のポリオキシエチレンアルキルエーテル(Briji系界面活性剤);Dodecyl-β-D-maltose;Octyl-β-D-glucoside等の非イオン性界面活性剤やドデシル硫酸ナトリウム(SDS)等の陰イオン性界面活性剤や塩化ベンザルコニウム、塩化ベンゼトニウム、ジデシルジメチルアンモニウム塩、ドデシルトリメチルアンモニウムクロリド等の陽イオン性界面活性剤やCHAPS(3-(3-cholamidepropyl)dimethylammonio-1-propanesulphonate)、塩化アルキルポリアミノエチルグリシン等の両性界面活性剤を挙げることができる。 In the above step (a), it is preferable not to hemolyze the subject-derived blood culture with a substance (hemolytic agent) other than ammonium chloride, because ammonium chloride alone can be effectively hemolyzed. Here, examples of hemolytic agents other than ammonium chloride include surfactants and hypotonic solutions. Examples of such surfactants include Triton-100X-100 (Triton is a registered trademark) (polyoxyethylene (10) octylphenyl ether), Triton X-114 (polyoxyethylene (8) octylphenyl ether), Triton X-405 ( Polyoxyethylene pt-octylphenyl ether (Triton surfactant) such as polyoxyethylene (40) isooctylphenyl ether), NP-40 (Nonidet P-40) (polyoxyethylene (9) octylphenyl ether); Polyoxyethylene sorbitan fatty acid esters (Tween surfactant) such as Tween 20 (Tween is a registered trademark), Tween 40, Tween 60, Tween 80, Tween 65, Tween 85; Briji 35 (Briji is a registered trademark) (polyoxy) Polyoxyethylene alkyl ethers (Briji surfactants) such as ethylene (23) lauryl ether); Nonionic interfaces such as Dodecyl-β-D-maltose; Octyl-β-D-glucoside And anionic surfactants such as sodium dodecyl sulfate (SDS), cationic surfactants such as benzalkonium chloride, benzethonium chloride, didecyldimethylammonium salt, dodecyltrimethylammonium chloride and CHAPS (3- ( And amphoteric surfactants such as 3-cholamidepropyl) dimethylammonio-1-propanesulphonate) and alkyl polyaminoethylglycine chloride.

 上記低張液としては、体液(例えば血漿)や細胞液の浸透圧よりも低くなるようにナトリウムやカリウムなどによって塩や糖濃度等を調整した低張液であれば特に制限されない。本明細書において「低張」とは、浸透圧が250mOsm/Lよりも低いことを意味する。 The hypotonic solution is not particularly limited as long as it is a hypotonic solution in which the salt or sugar concentration is adjusted with sodium or potassium so as to be lower than the osmotic pressure of a body fluid (for example, plasma) or cell fluid. As used herein, “hypotonic” means that the osmotic pressure is lower than 250 mOsm / L.

[本件検出法における工程(b)について]
 上記工程(b)の濾過処理により、溶血試料中のヘモグロビン等の血球成分は、濾過膜を通過する。このため、溶血試料中に細菌が含まれる場合、細菌は、残渣として濾過膜に捕捉され、血球成分と分離することができる。
[About step (b) in this detection method]
By the filtration treatment in the step (b), blood cell components such as hemoglobin in the hemolyzed sample pass through the filtration membrane. For this reason, when bacteria are contained in the hemolyzed sample, the bacteria can be captured as a residue on the filtration membrane and separated from the blood cell component.

 上記濾過処理する方法としては、例えば、工程(a)で調製した溶血試料を、濾過膜を備え、プラスチック、金属、ガラス等の材質により製造された容器内に移し、シリンジ、真空ポンプ、アスピレーター、コンプレッサー等の機器を用いて吸引又は加圧することにより濾過処理する方法や、濾過膜を備え、プラスチック、金属、ガラス等の材質により製造された遠沈管又は試験管内に移し、遠心することにより濾過処理する方法を挙げることができ、大掛かりな機器を使用しないで、より簡便に濾過処理する観点から、シリンジを手動操作することにより加圧又は減圧し、濾過処理する方法や、遠心することにより濾過処理する方法が好ましい。また、細菌のコンタミネーションを防ぐ観点から、濾過処理は密閉系で行うことが好ましく、濾過膜は、ディスポーザブルのものが好ましい。 As the method for the filtration treatment, for example, the hemolyzed sample prepared in the step (a) is transferred to a container provided with a filtration membrane and made of a material such as plastic, metal, glass, etc., and a syringe, a vacuum pump, an aspirator, Filtration by suction or pressurization using a device such as a compressor, or filtration into a centrifuge tube or test tube made of a material such as plastic, metal, glass, etc., equipped with a filtration membrane and centrifuged From the viewpoint of more easily performing filtration without using a large-scale device, a method of performing pressure treatment or pressure reduction by manually operating a syringe and performing filtration treatment, or filtration treatment by centrifuging. Is preferred. From the viewpoint of preventing bacterial contamination, the filtration treatment is preferably performed in a closed system, and the filtration membrane is preferably disposable.

 上記濾過膜の孔径としては、細菌を通過させない孔径であればよく、通常1.5μm以下、好ましくは1.2μm以下、より好ましくは0.8μm以下、さらに好ましくは0.7μm以下、さらにより好ましくは0.6μm以下、最も好ましくは0.5μm以下であり、ヘモグロビン等の血球成分による目詰まりを回避する観点から、通常0.1μm以上、好ましくは0.2μm以上、より好ましくは0.25μm以上、さらに好ましくは0.3μm以上、さらにより好ましくは0.35μm以上、最も好ましくは0.4μm以上である。したがって、濾過処理に使用する濾過膜の孔径としては、通常0.1~1.5μmの範囲内、好ましくは0.2~1.2μm、より好ましくは0.25~0.8μm、さらに好ましくは0.3~0.7μm、さらにより好ましくは0.35~0.6μm以下、最も好ましくは0.4~0.5μm以下である。 The pore size of the filtration membrane may be any pore size that does not allow bacteria to pass through, and is usually 1.5 μm or less, preferably 1.2 μm or less, more preferably 0.8 μm or less, still more preferably 0.7 μm or less, and even more preferably. Is 0.6 μm or less, most preferably 0.5 μm or less, and is usually 0.1 μm or more, preferably 0.2 μm or more, more preferably 0.25 μm or more from the viewpoint of avoiding clogging by blood cell components such as hemoglobin. More preferably, it is 0.3 μm or more, even more preferably 0.35 μm or more, and most preferably 0.4 μm or more. Therefore, the pore size of the filtration membrane used for the filtration treatment is usually within the range of 0.1 to 1.5 μm, preferably 0.2 to 1.2 μm, more preferably 0.25 to 0.8 μm, and still more preferably. It is 0.3 to 0.7 μm, even more preferably 0.35 to 0.6 μm or less, and most preferably 0.4 to 0.5 μm or less.

 上記濾過膜の材質としては、例えば、セルロース混合エステル(MCE;Mixed cellulose esters)、ポリビニリデンフロライド(PVDF)、ポリテトラフルオロエチレン(PTFE)、親水性PTFE、ポリエーテルスルホン(PES)、親水性ポリエーテルスルホン(hydrophilic polyethersulfone)、親水性ポリプロピレン(GHP)、ナイロン(NYL)、セルロースアセテート(CA;cellulose acetate)、ポリスルフォン(PSF)、アクリル系共重合体(acrylic copolymer)、ポリアミド、ナイロン6,6、ポリエステル、ポリカーボネート、ニトロセルロース、ニトロセルロースとセルロースエステルの混合物等を挙げることができる。 Examples of the material of the filtration membrane include cellulose mixed esters (MCE), polyvinylidene fluoride (PVDF), polytetrafluoroethylene (PTFE), hydrophilic PTFE, polyethersulfone (PES), and hydrophilic. Polyethersulfone (hydrophilic polyethersulfone), hydrophilic polypropylene (GHP), nylon (NYL), cellulose acetate (CA), polysulfone (PSF), acrylic copolymer (acrylic copolymer), polyamide, nylon 6, 6, polyester, polycarbonate, nitrocellulose, a mixture of nitrocellulose and cellulose ester, and the like.

[本件検出法における工程(c)について]
 上記工程(c)において、残渣試料を得る方法としては、工程(b)の濾過処理後の濾過膜から、残渣を遊離させ、回収できる方法であればよく、薬さじ等を用いて上記濾過膜に捕捉された残渣を掻き取る方法であってもよいが、残渣に含まれる細菌の回収効率の観点から、上記濾過膜の一部又は全部を純水中に浸し、濾過膜及び/又は純水を撹拌した後、残渣を含む水から遠心分離により残渣を回収する方法が好ましく、ここで遠心分離は、細菌のコンタミネーションを防ぐ観点から、密閉系で行うことが好ましい。また、残渣を回収する前に、上記濾過膜を、純水を用いて洗浄することが好ましい。洗浄回数としては、少なくとも1回であればよく、複数回(2、3、4回等)であってもよいが、時間対効果及び費用対効果を考慮すると、1回が好ましい。また、濾過膜の洗浄は、工程(b)の濾過処理後の濾過膜に純水を添加し、濾過処理と同様の吸引又は加圧方法により、純水を濾過膜内に通過させることにより行うことができる。
[About step (c) in this detection method]
In the step (c), as a method for obtaining a residue sample, any method can be used as long as it can release and recover the residue from the filtration membrane after the filtration treatment in the step (b). However, from the viewpoint of recovery efficiency of bacteria contained in the residue, a part or all of the filtration membrane may be immersed in pure water to obtain a filtration membrane and / or pure water. Is preferably collected from the water containing the residue by centrifugation, and the centrifugation is preferably carried out in a closed system from the viewpoint of preventing bacterial contamination. Moreover, it is preferable to wash | clean the said filtration membrane using a pure water before collect | recovering a residue. The number of washings may be at least once and may be a plurality of times (2, 3, 4 etc.), but is preferably 1 in consideration of time-effectiveness and cost-effectiveness. The filtration membrane is washed by adding pure water to the filtration membrane after the filtration treatment in step (b) and passing the pure water through the filtration membrane by the same suction or pressurization method as the filtration treatment. be able to.

 本明細書において、「純水」とは、不純物やイオン性物質を除去した水のことを意味し、具体的には、電気伝導率が24~26℃条件下で、10μS/cm以下の水を意味する。純水は、水道水を、蒸留及び/又はイオン交換することにより、調製することができる。 In the present specification, “pure water” means water from which impurities and ionic substances have been removed. Specifically, water having an electric conductivity of 10 μS / cm or less under a condition of 24 to 26 ° C. Means. Pure water can be prepared by distillation and / or ion exchange of tap water.

[本件検出法における工程(d)について]
 上記工程(d)において、質量分析計を用いて解析する方法としては、残渣試料を、イオン源を用いて気体状のイオンとし(イオン化)、分析部において、真空中で運動させ電磁気力を用いて、あるいは飛行時間差によりイオン化した残渣試料を質量電荷比に応じて分離し、検出できる質量分析計を用いた解析方法であれば特に制限されない。ここで、イオン源を用いてイオン化する方法としては、電子イオン化(EI)法、化学イオン化(CI)法、電界脱離イオン化(FD)法、高速原子衝撃(FAB)法、マトリックス支援レーザー脱離イオン化(MALDI)法、エレクトロスプレーイオン化(ESI)法等の方法を適宜選択することができ、また、分析部において、イオン化した血液試料を分離する方法としては、磁場偏向型、四重極型、イオントラップ型、飛行時間(TOF)型、フーリエ変換イオンサイクロトロン共鳴型等の分離方法を適宜選択することができる。また、2以上の質量分析法を組み合わせたタンデム型質量分析(MS/MS)を利用することができる。また、ガスクロマトグラフィー(GC)や液体クロマトグラフィー(LC)や高速液体クロマトグラフィー(HPLC)により、SBPやメチルシステインを夾雑物から分離・精製して分析することができる。質量分析計としては、マトリックス支援レーザー脱離イオン化飛行時間型質量分析計(MALDI-TOF MS)が好ましい。
[About step (d) in this detection method]
In the above step (d), as a method of analysis using a mass spectrometer, the residual sample is converted into gaseous ions using an ion source (ionization), and is moved in a vacuum in the analysis unit to use electromagnetic force. Or an analysis method using a mass spectrometer capable of separating and detecting a residue sample ionized by a time-of-flight difference according to the mass-to-charge ratio is not particularly limited. Here, ionization using an ion source includes electron ionization (EI) method, chemical ionization (CI) method, field desorption ionization (FD) method, fast atom bombardment (FAB) method, matrix-assisted laser desorption. A method such as an ionization (MALDI) method or an electrospray ionization (ESI) method can be appropriately selected. In addition, as a method for separating an ionized blood sample in the analysis unit, a magnetic field deflection type, a quadrupole type, Separation methods such as an ion trap type, a time-of-flight (TOF) type, and a Fourier transform ion cyclotron resonance type can be appropriately selected. Further, tandem mass spectrometry (MS / MS) combining two or more mass spectrometry methods can be used. Further, SBP and methylcysteine can be separated and purified from impurities by gas chromatography (GC), liquid chromatography (LC), and high performance liquid chromatography (HPLC). As the mass spectrometer, a matrix-assisted laser desorption / ionization time-of-flight mass spectrometer (MALDI-TOF MS) is preferable.

 上記工程(d)において、残渣試料中に細菌が含まれているか否かは、残渣試料から質量分析用のサンプルを調製し、質量分析計を用いて解析する。残渣試料における解析対象物としては、細菌由来の物質(例えば、タンパク質、ペプチド、化合物)であればよく、細菌における発現量が多く;イオン化されやすく;トリプシン等のタンパク質分解酵素によりペプチド断片化処理することなく、分子量が約4000~15,000Daの範囲内でTOFMSに検出されやすい;細菌の種類を判別することができるマススペクトルパターンが、多数の種類の細菌について既に知られている;等の理由から、細菌由来のリボソームタンパク質が好ましい。 In the above step (d), whether or not bacteria are contained in the residue sample is prepared by preparing a sample for mass spectrometry from the residue sample and analyzing it using a mass spectrometer. The analysis target in the residual sample may be any substance derived from bacteria (for example, protein, peptide, compound), and its expression level in bacteria is large; it is easily ionized; peptide fragmentation is performed using a proteolytic enzyme such as trypsin. Without being easily detected by TOFMS within a molecular weight range of about 4000-15,000 Da; mass spectral patterns capable of distinguishing bacterial types are already known for many types of bacteria; Therefore, a ribosomal protein derived from bacteria is preferable.

 上記工程(d)において、残渣試料中に細菌が検出された場合、上記被験者は、細菌に感染している可能性が高いと診断するためのデータを取得することができ、残渣試料中に細菌が検出されない場合、上記被験者は、細菌に感染している可能性が低いと診断するためのデータを取得することができる。このため、本発明の実施の他の形態として、上記工程(a)~(d)を含み、さらに、これらのデータを取得する工程を含む、被験者が細菌に感染しているか否かを診断するためのデータを収集する方法を挙げることができる。 When bacteria are detected in the residue sample in the step (d), the subject can acquire data for diagnosing that there is a high possibility that the subject is infected with bacteria. If no is detected, the subject can acquire data for diagnosing that the possibility of being infected with bacteria is low. Therefore, as another embodiment of the present invention, it is diagnosed whether or not the subject is infected with bacteria, including the above steps (a) to (d), and further including the step of acquiring these data The method of collecting data for can be mentioned.

 以下、実施例により本発明をより具体的に説明するが、本発明の技術的範囲はこれらの例示に限定されるものではない。なお、本実施例で用いる血液試料の培養物(血液培養物)は、2016年6月~2017年4月の間に、重症感染症患者から採取された血液試料を、培養温度35℃の条件下で12~48時間培養することにより得られた培養物のうち、血液培養自動分析装置(BACTEC FX SYSTEM、BD Bioscience社製)により培養陽性となった培養物(n=120)である。 Hereinafter, the present invention will be described more specifically by way of examples. However, the technical scope of the present invention is not limited to these examples. The blood sample culture (blood culture) used in this example is a blood sample collected from a patient with severe infection between June 2016 and April 2017 under the condition of a culture temperature of 35 ° C. Among the cultures obtained by culturing for 12 to 48 hours under the above, it is a culture (n = 120) that became culture positive by an automated blood culture analyzer (BACTEC FX SYSTEM, BD Bioscience).

1.方法
1-1 本件検出法
 本件検出法は、以下の手順〔1〕~〔6〕に従って行った。
〔1〕1.55Mの塩化アンモニウム含有溶血剤(BD Bioscience社製)100μLを、900μLのPBS溶液で10倍希釈した後、1.5mLの血液培養物に添加・混合し、すぐに、孔径が0.45μmの濾過膜(37mmクオリティモニター[日本PALL社製])上に添加した。
〔2〕37mmクオリティモニターに装着したシリンジによる手動操作により、155mM塩化アンモニウム含有血液試料を濾過した。
〔3〕2mLの蒸留水を37mmクオリティモニター上に添加し、37mmクオリティモニターに装着したシリンジによる手動操作により濾過洗浄した。
〔4〕洗浄後の37mmクオリティモニターを取り出し、1mLの蒸留水中に浸し、30秒間ボルテックスミキサーを用いて撹拌した後、遠心処理(20600g×3分間、室温)し、上清を除去した。
〔5〕得られた沈殿物のうち、数μgをMALDIサンプルターゲット(Bruker Daltonics社製)上に載せ、1μLの70%ギ酸と、1μLのマトリックス溶液(2,5-ジヒドロキシ安息香酸、80mg/mL、30%アセトニトリル、0.1%トリフルオロ酢酸)を添加し、乾燥処理による結晶化を行った。なお、結晶化したサンプルは、乾燥処理前のサンプルの湿度が40%まで低下したとき、もっとも安定した測定が可能となることが報告されているので(文献「Umemura, H. et al., Clinica Chimica Acta. 2010, 411 2109-2111」参照)、本実施例においても同様に、湿度が40%の結晶化サンプルを調製した。
〔6〕乾燥後のサンプルに、α-Cyano-4-hydroxycinnamic Acid(CHCA)マトリックス試薬(Bruker Daltonics社製)を1μL添加し、乾燥後にMALDI-TOF MS(Microflex[Bruker Daltonics社製])に導入し、2重測定を行い、その平均値を算出した。マススペクトルの取得は、Flex Controlソフトウェア(Bruker Daltonics社製)を用いて行い、リボソームタンパク質のフィンガープリント(マススペクトルパターン)を基にした細菌種の同定は、MALDIバイオタイパー3.1ソフトウェア(Bruker Daltonics社製)を用いて行った。スコア値が2.0以上の場合、菌種レベルの一致が高いと評価し、スコア値が1.7以上~2.0未満の場合、属レベルの一致が高いと評価し、スコア値が1.7未満の場合、同定不能と評価した。
1. Method 1-1 Case Detection Method The case detection method was carried out according to the following procedures [1] to [6].
[1] 100 μL of 1.55 M ammonium chloride-containing hemolytic agent (BD Bioscience) was diluted 10-fold with 900 μL of PBS solution, added to and mixed with 1.5 mL of blood culture, and immediately the pore size was increased. It added on the 0.45 micrometer filtration membrane (37-mm quality monitor [made by Japan PALL)].
[2] A blood sample containing 155 mM ammonium chloride was filtered by manual operation with a syringe attached to a 37 mm quality monitor.
[3] 2 mL of distilled water was added on a 37 mm quality monitor, and was filtered and washed by manual operation using a syringe attached to the 37 mm quality monitor.
[4] The 37 mm quality monitor after washing was taken out, immersed in 1 mL of distilled water, stirred for 30 seconds using a vortex mixer, and then centrifuged (20600 g × 3 minutes, room temperature) to remove the supernatant.
[5] Several μg of the obtained precipitate is placed on a MALDI sample target (manufactured by Bruker Daltonics), 1 μL of 70% formic acid and 1 μL of a matrix solution (2,5-dihydroxybenzoic acid, 80 mg / mL) , 30% acetonitrile, 0.1% trifluoroacetic acid) was added, and crystallization was performed by a drying treatment. It is reported that the crystallized sample can be measured most stably when the humidity of the sample before the drying treatment is reduced to 40% (references “Umemura, H. et al., Clinica”). Chimica Acta. 2010, 411 2109-2111 "), and in this example, a crystallized sample having a humidity of 40% was also prepared.
[6] 1 μL of α-Cyano-4-hydroxycinnamic Acid (CHCA) matrix reagent (manufactured by Bruker Daltonics) is added to the sample after drying, and is introduced into MALDI-TOF MS (Microflex [manufactured by Bruker Daltonics]) after drying. Then, double measurement was performed and the average value was calculated. Mass spectra were acquired using Flex Control software (Bruker Daltonics), and bacterial species identification based on ribosomal protein fingerprints (mass spectrum patterns) was performed using MALDI Biotyper 3.1 software (Bruker Daltonics). Made by the company). When the score value is 2.0 or more, it is evaluated that the bacterial species level is high, and when the score value is 1.7 to less than 2.0, it is evaluated that the genus level is high, and the score value is 1 If less than .7, it was evaluated as unidentifiable.

1-2 従来技術の検出法
 従来技術の検出方法は、以下の手順〔1〕~〔5〕に従って行った。
〔1〕1.5mLの血液培養物を、血漿分離剤入り滅菌真空採血管(インセパック[登録商標]II;積水メディカル社製)に入れ、遠心処理(1710g×5分間)した。
〔2〕上清(血漿画分)を除去し、1mLの純水を添加し、1.5mLのチューブに移した後、遠心処理(15000rpm×3分間)した。
〔3〕上清(純水画分)を除去し、0.9mLのエタノールを添加し、遠心処理(15000rpm×3分間)した。
〔4〕上清(エタノール画分)を除去し、50μLの70%ギ酸及び50μLのアセトニトリルを添加し、遠心処理(15000rpm×3分間)した。
〔5〕上清を回収し、MALDI-TOF MS(Microflex[Bruker Daltonics社製])に導入し、2重測定を行い、その平均値を算出した。マススペクトルの取得や、細菌種の同定は、上記「1-1」の項目の手順〔6〕に記載の方法に従って行った。
1-2 Prior Art Detection Method The prior art detection method was performed according to the following procedures [1] to [5].
[1] A 1.5 mL blood culture was placed in a sterile vacuum blood collection tube (Insepack [registered trademark] II; manufactured by Sekisui Medical Co., Ltd.) containing a plasma separating agent, and centrifuged (1710 g × 5 minutes).
[2] The supernatant (plasma fraction) was removed, 1 mL of pure water was added, transferred to a 1.5 mL tube, and then centrifuged (15000 rpm × 3 minutes).
[3] The supernatant (pure water fraction) was removed, 0.9 mL of ethanol was added, and the mixture was centrifuged (15000 rpm × 3 minutes).
[4] The supernatant (ethanol fraction) was removed, 50 μL of 70% formic acid and 50 μL of acetonitrile were added, and centrifuged (15000 rpm × 3 minutes).
[5] The supernatant was collected, introduced into MALDI-TOF MS (Microflex [manufactured by Bruker Daltonics)], double measurement was performed, and the average value was calculated. Acquisition of mass spectrum and identification of bacterial species were carried out according to the method described in the procedure [6] in the item “1-1” above.

2.結果
 同定されたグラム陰性菌及びグラム陽性菌を、それぞれ表1及び2に示す。グラム陰性菌について、菌種レベルの一致が高いと評価された数は、従来技術の検出法を用いた場合、44であったのに対して、本件検出法を用いた場合、50であり、本件検出法の検出感度は、従来技術の検出法の検出感度に対して約1.14倍の高さであった(表1の「≧2.0」参照)。また、グラム陽性菌について、菌種レベルの一致が高いと評価された数は、従来技術の検出法を用いた場合、23であったのに対して、本件検出法を用いた場合、51であり、本件検出法の検出感度は、従来技術の検出法の検出感度に対して約2.2倍の高さであった(表2の「≧2.0」参照)。同定されたグラム陽性菌のうち、最も病原性が強く、皮膚感染症、肺炎、心内膜炎、骨髄炎等の疾患を引き起こすことが知られているブドウ球菌、特に血液培養における検出菌の割合が高いことが知られている6種(Staphylococcus aureus、Staphylococcus epidermidis、Staphylococcus capitis、Staphylococcus hominis、Staphylococcus simulans、及びStaphylococcus haemolyticus)(文献「日本臨床微生物学会誌 Vol.22 No.1 2012.13-19」及び文献「信州医誌,54(5):257~263,2006」参照)について着目すると、菌種レベルの一致が高いと評価された数は、従来技術の検出法を用いた場合、14であったのに対して、本件検出法を用いた場合、32であり、本件検出法の検出感度は、従来技術の検出法の検出感度に対して約2.3倍の高さであった(表2の「≧2.0」参照)。
 これらの結果は、本件検出法は、従来技術の検出法と比べ、血液培養物中の細菌を高い感度で検出できることを示すとともに、従来技術の検出法とは異なり、遠心分離をすることなく、細菌の菌体から血球成分を分離することが可能であり、また、その後のMALDI-TOF MS用サンプルの調製も比較的短時間で行うことができるため、簡便性及び迅速性にも優れていることを示している。
2. Results The identified Gram-negative and Gram-positive bacteria are shown in Tables 1 and 2, respectively. For Gram-negative bacteria, the number evaluated as having high agreement between the species levels was 44 when using the detection method of the prior art, whereas it was 50 when using this detection method. The detection sensitivity of the present detection method was about 1.14 times higher than the detection sensitivity of the conventional detection method (see “≧ 2.0” in Table 1). In addition, the number of gram-positive bacteria evaluated as having a high match at the bacterial species level was 23 when the conventional detection method was used, while 51 when the detection method was used. Yes, the detection sensitivity of the present detection method was about 2.2 times as high as the detection sensitivity of the conventional detection method (see “≧ 2.0” in Table 2). Percentage of gram-positive bacteria identified that are the most pathogenic and are known to cause diseases such as skin infections, pneumonia, endocarditis, osteomyelitis, especially those detected in blood culture (Staphylococcus aureus, Staphylococcus epidermidis, Staphylococcus capitis, Staphylococcus hominis, Staphylococcus simulans, and Staphylococcus haemolyticus) (literature journal of Japanese Society of Clinical Microbiology Vol.22 No.1 2012.13-19) And the document “Shinshu Medical Journal, 54 (5): 257-263, 2006”), the number that was evaluated as having high coincidence of bacterial species levels was 14 when the detection method of the prior art was used. On the other hand, when this detection method is used, the detection sensitivity is 32, and the detection sensitivity of this detection method is about 2.3 times higher than the detection sensitivity of the conventional detection method. Was Tsu (see "≧ 2.0" in Table 2).
These results show that this detection method can detect bacteria in blood culture with higher sensitivity compared to the detection method of the prior art, and unlike the detection method of the prior art, without centrifugation, Blood cell components can be separated from bacterial cells, and samples for MALDI-TOF MS can be prepared in a relatively short time. It is shown that.

Figure JPOXMLDOC01-appb-T000001
Figure JPOXMLDOC01-appb-T000001

Figure JPOXMLDOC01-appb-T000002
Figure JPOXMLDOC01-appb-T000002

[塩化アンモニウム以外の溶血剤との比較]
 実施例1に記載の本件検出法において、塩化アンモニウムに代えて、3種類の溶血剤(NP-40、Tween 20、及びTriton X-100)を用い、血液試料中の腸内細菌(Klebsiella pneumoniae)を同様に検出した。なお、血液培養物に添加後のNP-40、Tween 20、及びTriton X-100の濃度は、それぞれ、0.032mol/L、0.016mol/L、及び0.03mol/Lである。
[Comparison with hemolytic agents other than ammonium chloride]
In the present detection method described in Example 1, in place of ammonium chloride, three types of hemolytic agents (NP-40, Tween 20, and Triton X-100) were used, and enteric bacteria (Klebsiella pneumoniae) in the blood sample were used. Was similarly detected. Note that the concentrations of NP-40, Tween 20, and Triton X-100 after addition to the blood culture are 0.032 mol / L, 0.016 mol / L, and 0.03 mol / L, respectively.

 その結果、Triton X-100及びTween 20を用いた場合、Klebsiella pneumoniae由来のマススペクトルのピークは、検出されなかったのに対して、NP-40を用いた場合、塩化アンモニウムを用いた場合と同様に、スコア値は2以上であり、菌種レベルで同定できることが示された(表3参照)。 As a result, when Triton X-100 and Tween 20 were used, the peak of the mass spectrum derived from Klebsiella pneumoniae was not detected, whereas when NP-40 was used, it was the same as when ammonium chloride was used. Thus, the score value was 2 or more, and it was shown that it can be identified at the bacterial species level (see Table 3).

Figure JPOXMLDOC01-appb-T000003
Figure JPOXMLDOC01-appb-T000003

 次に、検出対象の細菌(Klebsiella pneumoniae)を、黄色ブドウ球菌(Staphylococcus aureus)に代えて、同様に検出を行った。その結果、NP-40を用いた場合、菌種レベルで同定された検体(スコア値≧2)は、3検体中1検体であり(表4参照)、また、スコア値の平均値±標準偏差が、1.868±0.14であったのに対して、塩化アンモニウムを用いた場合、3検体すべてが菌種レベルで同定することができ(表4参照)、また、スコア値の平均値±標準偏差は、2.138±0.03であった。
 以上の結果は、本件検出法において、塩化アンモニウムを用いると、塩化アンモニウム以外の溶血剤(例えば、NP-40、Tween 20、Triton X-100)を用いた場合と比べ、血液試料中の細菌を感度よく検出できることを示している。
Next, the detection target bacteria (Klebsiella pneumoniae) were replaced with Staphylococcus aureus and detected in the same manner. As a result, when NP-40 was used, the number of specimens identified at the bacterial species level (score value ≧ 2) was 1 out of 3 specimens (see Table 4), and the mean value of the score values ± standard deviation Was 1.868 ± 0.14, but when ammonium chloride was used, all three samples could be identified at the bacterial species level (see Table 4), and the average score value The standard deviation was 2.138 ± 0.03.
The above results show that in the present detection method, when ammonium chloride is used, bacteria in the blood sample are less than when a hemolytic agent other than ammonium chloride (eg, NP-40, Tween 20, Triton X-100) is used. It shows that it can be detected with high sensitivity.

Figure JPOXMLDOC01-appb-T000004
Figure JPOXMLDOC01-appb-T000004

 本発明は、被験者における細菌(特に病原性細菌)感染症の診断や、早期予防又は早期治療に資するものである。 The present invention contributes to diagnosis, early prevention or early treatment of bacterial (especially pathogenic bacteria) infections in subjects.

Claims (5)

 以下の工程(a)~(d)を含むことを特徴とする、血液試料中の細菌の検出方法。
(a)被験者から採取された血液試料の培養物を、塩化アンモニウムと混合し、溶血試料を得る工程;
(b)前記溶血試料を、細菌を通過させない孔径を有する濾過膜で濾過処理する工程;
(c)前記濾過処理後の濾過膜に捕捉された残渣を回収し、残渣試料を得る工程;
(d)前記残渣試料中に細菌が含まれているか否かを、質量分析計を用いて解析する工程;
A method for detecting bacteria in a blood sample, comprising the following steps (a) to (d):
(A) mixing a culture of a blood sample collected from a subject with ammonium chloride to obtain a hemolyzed sample;
(B) filtering the hemolyzed sample with a filter membrane having a pore size that does not allow bacteria to pass through;
(C) collecting the residue trapped on the filtration membrane after the filtration treatment to obtain a residue sample;
(D) analyzing the presence or absence of bacteria in the residue sample using a mass spectrometer;
 質量分析計が、マトリックス支援レーザー脱離イオン化飛行時間型質量分析計(MALDI-TOF MS)であることを特徴とする請求項1に記載の検出方法。 The detection method according to claim 1, wherein the mass spectrometer is a matrix-assisted laser desorption / ionization time-of-flight mass spectrometer (MALDI-TOF MS).  工程(c)において、濾過処理後の濾過膜を純水中に浸し、遠心分離により残渣を回収することを特徴とする請求項1又は2に記載の検出方法。 The detection method according to claim 1 or 2, wherein in step (c), the filtration membrane after the filtration treatment is immersed in pure water, and the residue is collected by centrifugation.  工程(a)において、被験者から採取された血液試料の培養物を、塩化アンモニウム以外の溶血剤で処理しないことを特徴とする請求項1~3のいずれかに記載の検出方法。 The detection method according to any one of claims 1 to 3, wherein, in the step (a), the culture of the blood sample collected from the subject is not treated with a hemolytic agent other than ammonium chloride.  工程(b)と工程(c)の間に、濾過処理後の濾過膜を、純水を用いて洗浄する工程(m)を含むことを特徴とする請求項1~4のいずれかに記載の検出方法。 The process (m) according to any one of claims 1 to 4, further comprising a step (m) of washing the filtered membrane after the filtration treatment with pure water between the step (b) and the step (c). Detection method.
PCT/JP2019/012397 2018-03-28 2019-03-25 Method for detecting bacteria in blood sample Ceased WO2019188924A1 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2018-061903 2018-03-28
JP2018061903A JP2021093913A (en) 2018-03-28 2018-03-28 Methods for detecting bacteria in blood samples

Publications (1)

Publication Number Publication Date
WO2019188924A1 true WO2019188924A1 (en) 2019-10-03

Family

ID=68058165

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/JP2019/012397 Ceased WO2019188924A1 (en) 2018-03-28 2019-03-25 Method for detecting bacteria in blood sample

Country Status (3)

Country Link
JP (1) JP2021093913A (en)
TW (1) TW202003859A (en)
WO (1) WO2019188924A1 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115461466A (en) * 2020-05-12 2022-12-09 株式会社日立高新技术 Automatic analysis device and automatic analysis method

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2011058131A1 (en) * 2009-11-12 2011-05-19 Centre Hospitalier Universitaire Vaudois (Chuv) Methods of producing a bacterial preparation
JP2012507711A (en) * 2008-10-31 2012-03-29 バイオメリュー・インコーポレイテッド Method for separating, characterizing and / or identifying microorganisms using mass spectrometry
JP2012532618A (en) * 2009-07-16 2012-12-20 ブルーカー ダルトニック ゲーエムベーハー Mass spectrometry diagnosis of sepsis
US20160251694A1 (en) * 2010-08-02 2016-09-01 Jochen Franzen Mass spectrometric diagnosis of sepsis without blood culture

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2012507711A (en) * 2008-10-31 2012-03-29 バイオメリュー・インコーポレイテッド Method for separating, characterizing and / or identifying microorganisms using mass spectrometry
JP2012532618A (en) * 2009-07-16 2012-12-20 ブルーカー ダルトニック ゲーエムベーハー Mass spectrometry diagnosis of sepsis
WO2011058131A1 (en) * 2009-11-12 2011-05-19 Centre Hospitalier Universitaire Vaudois (Chuv) Methods of producing a bacterial preparation
US20160251694A1 (en) * 2010-08-02 2016-09-01 Jochen Franzen Mass spectrometric diagnosis of sepsis without blood culture

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
PROD'HOM, G. ET AL.: "Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Direct Bacterial Identification from Positive Blood Culture Pellets", JOURNAL OF CLINICAL MICROBIOLOGY, vol. 48, no. 4, 2010, pages 1481 - 1483, XP002626591, doi:10.1128/JCM.01780-09 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN115461466A (en) * 2020-05-12 2022-12-09 株式会社日立高新技术 Automatic analysis device and automatic analysis method
CN115461466B (en) * 2020-05-12 2025-10-31 株式会社日立高新技术 Automatic analysis device and automatic analysis method

Also Published As

Publication number Publication date
JP2021093913A (en) 2021-06-24
TW202003859A (en) 2020-01-16

Similar Documents

Publication Publication Date Title
EP2454377B1 (en) Mass spectrometric diagnosis of septicemia
US10597692B2 (en) Mass spectrometric diagnosis of sepsis without blood culture
Veron et al. Rapid urine preparation prior to identification of uropathogens by MALDI-TOF MS
WO2003091735A1 (en) Sample preparation of biological fluids for proteomic applications
EP2235541A2 (en) Methods of analyzing wound samples
US20220323045A1 (en) Capturing truncated proteoforms in exhaled breath for diagnosis and treatment of diseases
EP3024942A1 (en) Method for detecting microbial contamination of a blood sample product by mass spectrum analysis
WO2019188924A1 (en) Method for detecting bacteria in blood sample
CN115144494B (en) Method for detecting oligosaccharide in mammal milk
JP2022049707A (en) Method for detecting bacteria in blood sample
US20240248016A1 (en) Hemolysis reagent
TWI415943B (en) Peptide biomarker for identification of staphylococcus aureus with vancomycin resistance
JP7105454B2 (en) Analysis method, analysis method and microorganism identification method
CN119569825B (en) Milk-derived broad-spectrum antibacterial peptide and application thereof
CN121090206A (en) Pretreatment reagent for mass spectrum detection of blood culture positive sample and preparation method
KR20230148118A (en) Method for purification and enrichment of lipid-associated proteins for mass spectrometry analysis of lipid-associated proteins in biological samples
CN121293292A (en) Milk-derived broad-spectrum antibacterial peptide W-4 and application thereof
CN115754091A (en) Tandem mass spectrometry detection kit and method for detecting mycobacterium tuberculosis infection and application
CN121248728A (en) A broad-spectrum antimicrobial peptide W-3 derived from milk and its application
CN121248727A (en) A broad-spectrum antimicrobial peptide W-2 derived from milk and its application

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 19774644

Country of ref document: EP

Kind code of ref document: A1

NENP Non-entry into the national phase

Ref country code: DE

122 Ep: pct application non-entry in european phase

Ref document number: 19774644

Country of ref document: EP

Kind code of ref document: A1

NENP Non-entry into the national phase

Ref country code: JP