WO2016125278A1 - Optical analysis device using single light-emitting particle detection - Google Patents
Optical analysis device using single light-emitting particle detection Download PDFInfo
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- WO2016125278A1 WO2016125278A1 PCT/JP2015/053206 JP2015053206W WO2016125278A1 WO 2016125278 A1 WO2016125278 A1 WO 2016125278A1 JP 2015053206 W JP2015053206 W JP 2015053206W WO 2016125278 A1 WO2016125278 A1 WO 2016125278A1
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
- G01N21/64—Fluorescence; Phosphorescence
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- the present invention uses an optical system capable of detecting light from a minute region in a solution, such as an optical system of a confocal microscope, and uses atoms, molecules or aggregates thereof (hereinafter referred to as these) dispersed or dissolved in a solution.
- a solution such as an optical system of a confocal microscope
- biomolecules such as proteins, peptides, nucleic acids, lipids, sugar chains, amino acids or aggregates thereof, particulate objects such as viruses and cells, or non-biological
- the present invention relates to an optical analysis technique that can detect light from particles and obtain useful information in analysis or analysis of those states (interaction, binding / dissociation state, etc.).
- the present invention relates to an optical analysis apparatus that enables various optical analyzes by individually detecting light from a single light emitting particle using the optical system as described above.
- a particle that emits light (hereinafter referred to as “luminescent particle”) is either a particle that emits light itself, or a particle to which an arbitrary luminescent label or luminescent probe is added.
- the light emitted from the luminescent particles may be fluorescence, phosphorescence, etc. emitted by irradiation with excitation light.
- optical analysis techniques include, for example, fluorescence correlation spectroscopy (FCS; see, for example, Patent Document 1-3), fluorescence intensity distribution analysis (Fluorescence-Intensity Distribution Analysis: FIDA, for example, Patent Document 4).
- Patent Documents 6 to 8 propose a method for detecting a fluorescent substance based on the passage of time of a fluorescence signal of a sample solution measured using an optical system of a confocal microscope.
- Patent Documents 9 to 12 is an optical analysis technique using an optical system capable of detecting light from a minute region in a solution, such as an optical system of a confocal microscope or a multiphoton microscope.
- a new optical analysis technique based on a principle different from optical analysis techniques such as FCS and FIDA has been proposed.
- a novel photoanalysis technique hereinafter referred to as “scanning molecule counting method”
- a micro area hereinafter referred to as “light detection area” that is a light detection area in the sample solution is used.
- the light detection region is dispersed in the sample solution while moving the position of the sample solution by the light detection region.
- the light emitted from the luminescent particles is individually detected, thereby detecting the luminescent particles in the sample solution one by one and counting the luminescent particles or in the sample solution. It is possible to obtain information on the concentration or number density of the luminescent particles.
- the light detection region that moves relative to the sample solution includes one luminescent particle at a time. Is detected, and the presence of the luminescent particles is detected. Therefore, in order to increase the detectable number of luminescent particles per unit time, it is conceivable to increase the moving speed of the light detection region or enlarge the light detection region. However, when the moving speed of the light detection region is increased, the time for which one light emitting particle is included in the light detection region is shortened, the amount of light obtained from the light emitting particle is reduced, and the detection sensitivity or accuracy is reduced. Become.
- the intensity distribution of the excitation light within the light detection region has a substantially bell-shaped profile that has a maximum at the center and decreases toward the periphery.
- the total light amount of the excitation light is directly reduces the excitation light intensity per unit volume, in particular, light
- the light emitted from the luminescent particles in the region close to the periphery of the detection region becomes very weak and the detection accuracy decreases. Therefore, when expanding the photodetection area, it is necessary to increase the total amount of incident excitation light. In that case, since the profile of the light intensity distribution is substantially bell-shaped as described above, the excitation light intensity in the central region of the light detection region is very high.
- the number of luminescent particles detected at one time is one, and the luminescent ability of the luminescent particles (the maximum amount of luminescence per unit time) is limited. Even if the intensity of the light that excites the luminescent particles increases, the increase in the intensity of the light from the luminescent particles reaches its peak when the light emission amount of the luminescent particles reaches the saturation range. That is, when the total amount of incident excitation light is increased as the photodetection area is enlarged, if the excitation light intensity exceeds the level at which the light intensity of the luminescent particles saturates, the excitation light intensity is emitted. It does not contribute to the light emission of the particles, but only increases the noise light, and causes only a further decrease in the detection sensitivity or accuracy of the light emitting particles.
- the profile of the time change of the light intensity of the luminescent particles that pass relatively in the light detection region is typically , Having a substantially bell-shaped profile corresponding to the intensity distribution of the excitation light in the light detection region, the central region in the vicinity of the peak may not be sharp, and the region corresponding to the light intensity of the luminescent particles is a specific region. If it has a profile consisting of a significant sequence of light intensity values, the passage of luminescent particles can be detected.
- the further increase in the excitation light intensity only increases the noise light, and may cause the S / N ratio to deteriorate. It will be. That is, in the scanning molecule counting method, when the photodetection area is enlarged, the excitation light intensity associated with the enlargement of the photodetection area is increased in the central area of the photodetection area where the excitation light intensity is higher than the peripheral area. It can be said that no enhancement is necessary. Such knowledge is used in the present invention.
- the main problem of the present invention is that, in the scanning molecule counting method, when the photodetection area is enlarged in order to increase the detectable number of luminescent particles per unit time,
- An object of the present invention is to provide an optical analyzer for a scanning molecule counting method which is improved so as to reduce the ratio of the light amount, that is, the degree of deterioration of the S / N ratio as low as possible.
- the above problem is an optical analyzer that detects light from luminescent particles that are dispersed in a sample solution and move randomly using an optical system of a confocal microscope
- a light detection region moving unit that relatively moves the position of the light detection region of the optical system of the confocal microscope
- a light irradiation unit that irradiates the light detection region with excitation light, and detects light from the light detection region
- a signal processing unit that individually detects each signal of the luminescent particles in the data, and in the optical path of the excitation light in the light irradiation unit, in at least a part of the region including the center in the light detection region
- a beam-shaping element is provided to substantially flatten the light intensity distribution of the excitation light. It is achieved by its dependent device.
- a light-emitting particle dispersed in a sample solution and moving randomly is a particle that emits light, such as atoms, molecules, or aggregates thereof dispersed or dissolved in a sample solution. Any particle may be used as long as it is not fixed to the substrate or the like and freely moves in the solution in Brownian motion.
- luminescent particles are typically fluorescent particles, but may be particles that emit light upon irradiation with excitation light such as phosphorescence.
- the “light detection region” of the optical system of the confocal microscope is a minute region where light is detected in the microscope, and corresponds to a region where excitation light from the objective lens is collected.
- the light detection unit detects light from the light detection region by photon counting that counts the number of photons that arrive every predetermined measurement unit time (bin time), and in this case, the light intensity in time series The data becomes time-series photon count data.
- the term “light emitting particle signal” refers to a signal representing light from the light emitting particles unless otherwise specified.
- the scanning molecule counting method which is the basic configuration of the present invention
- the position of the photodetection region is moved in the sample solution, that is, the light is passed through the sample solution.
- Light is sequentially detected while scanning with the detection region.
- the light detection region that moves in the sample solution includes light emitting particles moving at random
- the light from the light emitting particles is detected, thereby detecting the presence of one light emitting particle. Therefore, the light signals from the luminescent particles are detected individually in the sequentially detected light intensity data, thereby detecting the presence of the particles individually one by one, and in the solution of particles.
- Various information related to the state is acquired.
- processing described in Patent Documents 9 to 12 or other patent application relating to the scanning molecule coefficient method by the applicant of the present application may be arbitrarily used.
- the light intensity distribution of the excitation light in at least a part of the region including the center in the light detection region Is provided with a beam shaping element for substantially flattening.
- a beam shaping element for substantially flattening.
- the profile of the light intensity distribution in the light detection region is not substantially bell-shaped with the center being the maximum value, but at least a part of the region including the center with respect to the size of the light detection region Therefore, the maximum intensity of the excitation light with respect to the size of the light detection area is kept lower than when the light detection area of the substantially bell-shaped profile is enlarged.
- the amount of excitation light that does not contribute to the light emission of the luminescent particles can be reduced.
- the region where the excitation light intensity is substantially maximum in the light detection region extends in a two-dimensional plane, the light intensity of the substantially bell-shaped profile with the same maximum excitation light intensity. Compared to the case of distribution, a strong signal persists for a longer time while one luminescent particle passes through the light detection region, and the signal of the luminescent particle can be detected more reliably. Be expected.
- the profile of the light intensity distribution in the light detection region is such that the excitation light intensity is substantially constant over a certain distance in the radial direction from the center to the optical axis.
- the temporal change in the intensity of light emitted by one luminescent particle passing through the region is no longer substantially bell-shaped. Therefore, in the case of the present invention, the signal processing unit has a profile corresponding to the profile of the light intensity distribution of the excitation light substantially flattened in at least a part of the region including the center in the light detection region. It is possible to individually detect a change in light intensity with a light as an optical signal of one luminescent particle.
- the profile of the light intensity distribution of the excitation light substantially flattened in at least a part of the region including the center in the light detection region can be determined experimentally or theoretically in advance.
- the expression of the temporal change profile of the light intensity of the luminescent particles corresponding to the light intensity distribution of the excitation light, which is partially flattened, will be described in the embodiment section.
- the beam shaping element typically uses a diffraction grating to emit a Gaussian beam in a radial direction from the center to the optical axis in a plane perpendicular to the optical axis.
- An element is employed that substantially constants the light intensity of the beam over a certain distance.
- the focal plane of the objective lens is moved along the optical axis. It has been found that the profile of the light intensity distribution at a certain distance is different from the profile at the focal plane of the objective lens.
- the profile of such light intensity distribution is unacceptably different from the substantially flattened profile in at least some areas including the center in the light detection area in the focal plane of the objective lens.
- the light detection unit When the light emitted from the light-emitting particles that has passed through the area enters the light detection unit, it is highly likely that the light from the light-emitting particles will not be detected as a signal from the light-emitting particles. Will increase and the S / N ratio will deteriorate. Therefore, in the above apparatus, light from a region where the profile of the light intensity distribution is unacceptably different from the profile at the focal plane of the objective lens along the optical axis of the objective lens reaches the light detection unit. It is preferable to limit as much as possible.
- the size of the light detection area in the optical axis direction of the objective lens is adjusted so that the light intensity distribution of the excitation light is smaller than the width in the optical axis direction of the objective lens in the area where the light intensity distribution is substantially flattened. It will be preferable to be done.
- the aperture diameter of the pinhole arranged at the conjugate position of the focal position of the objective lens of the optical system is not only the size of the light detection area in the direction parallel to the focal plane of the objective lens, but also the light detection area.
- the size in the optical axis direction that is, the range in which the light reaches the light detection unit is also determined.
- the aperture diameter of the pinhole arranged at the conjugate position of the focal position of the objective lens of the optical system is also the width in the optical axis direction of the objective lens in the region where the light intensity distribution of the excitation light is substantially flattened. It may be determined by reference. That is, in the above-described apparatus of the present invention, preferably, the aperture diameter of the pinhole disposed at the conjugate position of the focal position of the objective lens of the optical system is substantially equal to the light intensity distribution of the excitation light. It may be set based on the width in the optical axis direction of the objective lens in the flattened region.
- the reason why the light intensity distribution of the excitation light in at least a part of the region including the center in the light detection region is substantially flattened is that the light detection region is enlarged from a certain state. This is because when the incident light quantity of the excitation light is increased, an increase in the intensity of the excitation light in the central area in the light detection area is suppressed. Therefore, in the above configuration, preferably, when the beam shaping element is used, the intensity of the excitation light in the light detection region is the same as the incident light amount of the excitation light and the beam shaping element is not used. The intensity of the excitation light is adjusted so as to be reduced as compared with the case.
- the reason why the light intensity distribution of the excitation light is corrected using the beam shaping element is to avoid that the intensity of the excitation light exceeds the limit of the luminous ability of the luminescent particles and becomes unnecessarily high. Therefore, in order to avoid unnecessary excitation light being incident, more preferably, the excitation light intensity in the region where the light intensity distribution in the light detection region is flattened when the beam shaping element is used. Is preferably adjusted to the minimum intensity at which the luminous ability of the luminescent particles reaches a limit, but is not limited thereto. It can be experimentally confirmed whether or not the luminous ability of the luminescent particles is limited at a certain excitation light intensity.
- the optical analysis technique of the present invention described above is typically a biological molecule such as a protein, peptide, nucleic acid, lipid, sugar chain, amino acid or aggregate thereof, or a particulate biological object such as a virus or cell. It is used for analysis or analysis of the state of matter in solution, but it may also be used for analysis or analysis of the state of non-biological particles (eg, atoms, molecules, micelles, metal colloids, etc.) in solution. It should be understood that such cases are also within the scope of the present invention.
- a biological molecule such as a protein, peptide, nucleic acid, lipid, sugar chain, amino acid or aggregate thereof, or a particulate biological object such as a virus or cell. It is used for analysis or analysis of the state of matter in solution, but it may also be used for analysis or analysis of the state of non-biological particles (eg, atoms, molecules, micelles, metal colloids, etc.) in solution. It should be understood that such cases are also within the scope of
- Method and mode of moving the position of the light detection region with respect to the sample solution method and mode of extracting or detecting the signal of each luminescent particle from the light intensity value in the time-series light intensity data, parameters for determining the absolute concentration value
- the method and aspect for determining the value may be the same as the method and aspect described in Patent Documents 9 to 12 and the like.
- the profile of the light intensity distribution in the light detection region has a certain radial direction from the center to the optical axis. Since the excitation light intensity becomes substantially constant over the distance, the intensity of the excitation light in the center area of the light detection area becomes excessively high when the light detection area is enlarged and the excitation light incident light quantity is increased. This can be avoided. And since the light quantity of the excitation light which does not contribute to the increase in the light emission amount of the light emitting particles can be suppressed as compared with the case where the beam shaping element is not used, the deterioration of the S / N ratio is kept low, and the light detection region.
- the optical measurement time by the scanning molecular coefficient method can be shortened in a state where the degree of deterioration of the S / N ratio is kept low.
- FIG. 1A is a schematic diagram of the internal structure of an optical analyzer that performs the scanning molecule counting method according to the present invention.
- FIG. 1B is a schematic diagram of a confocal volume (observation region of a confocal microscope).
- FIG. 1C is a schematic diagram of a mechanism for changing the direction of the mirror 7 to move the position of the light detection region in the sample solution.
- FIG. 1D is a schematic diagram of a mechanism for moving the position of the photodetection region in the sample solution by moving the horizontal position of the microplate.
- FIGS. 2A and 2B are a schematic diagram for explaining the principle of light detection in the scanning molecule counting method to which the present invention is applied, and a schematic diagram of time variation of the measured light intensity, respectively.
- FIG. 3A is a schematic diagram of the light detection region having a diameter d1
- FIG. 3B is an intensity distribution of the excitation light Ex and the fluorescence Em of the luminescent particles in the light detection region of FIG. 3A
- FIG. FIG. 3C is a schematic diagram of a light detection region (when no beam shaping element is used) having a diameter d2 (> d1)
- FIG. 3D is a diagram illustrating the light detection region of FIG. It is the figure which represented typically the intensity distribution of excitation light Ex in this and fluorescence Em of the light emission particle.
- FIG. 3E is a schematic diagram of a photodetection region having a diameter d2 in which the central region FR is flattened using a beam shaping element.
- FIG. 3F is a diagram illustrating the photodetection region in FIG. It is the figure which represented typically the intensity distribution of excitation light Ex in this and fluorescence Em of the light emission particle.
- FIG. 4A is a diagram for explaining a change in the light intensity distribution in the light detection region in the optical axis direction of the objective lens when there is no beam shaping element in the illumination light optical system and when it exists.
- FIG. 4B is a diagram for explaining the action of the pinhole arranged at the focal position of the objective lens.
- FIG. 4C is a diagram for explaining that most of light emitted from a position away from the focal position of the objective lens in the optical axis direction of the objective lens cannot pass through the pinhole.
- FIG. 4A is a diagram for explaining a change in the light intensity distribution in the light detection region in the optical axis direction of the objective lens when there is no beam shaping element in the illumination light optical system and when it exists.
- FIG. 4B is a diagram for explaining the action of the pinhole
- FIG. 5 is a flowchart showing the procedure of the scanning molecule counting method executed in accordance with the present invention.
- FIGS. 6A and 6B show the case where the luminescent particles traverse the light detection region while performing Brownian motion and the position of the light detection region in the sample solution at a speed faster than the diffusion movement speed of the luminescent particles. It is a model figure showing the mode of movement of particles when luminous particles cross a photodetection region by moving.
- FIG. 6C shows the signal processing process of the detection signal in the processing procedure for detecting the presence of the luminescent particles from the measured time-series light intensity data (time change of the photon count) according to the scanning molecule counting method. It is a figure explaining an example.
- optical analysis apparatus 1 that realizes the optical analysis technique according to the present invention has a basic configuration described in Patent Documents 9 to 12, as schematically illustrated in FIG.
- the apparatus may be a combination of an optical system of a confocal microscope capable of executing a scanning molecule counting method and a photodetector.
- optical analysis apparatus 1 includes optical systems 2 to 17 and a computer 18 for controlling the operation of each part of the optical system and acquiring and analyzing data.
- the optical system of the optical analyzer 1 may be the same as the optical system of a normal confocal microscope, in which the laser light (Ex) emitted from the light source 2 and propagated through the single mode fiber 3 is a fiber.
- the light is emitted as a divergent light at an angle determined by a specific NA at the outgoing end of the light, becomes parallel light by the collimator 4, is reflected by the dichroic mirror 5, the reflection mirrors 6, 7, and the objective lens 8. Is incident on.
- a beam shaping element 100 is inserted between the collimator 4 and the dichroic mirror 5 (for example, AdolOptica Optical Systems (Germany) Systems GmbH) Focal- ⁇ Shaper etc. can be used.
- a microplate 9 in which sample containers or wells 10 into which a sample solution of 1 to several tens of ⁇ L is dispensed is arranged is typically disposed from the objective lens 8.
- the emitted laser light is focused in the sample solution in the sample container or well 10 to form a region (excitation region) with high light intensity.
- light-emitting particles that are the observation target typically particles to which fluorescent labels such as fluorescent particles or fluorescent dyes are added are dispersed or dissolved, and these light-emitting particles enter the excitation region.
- the luminescent particles are excited and light is emitted.
- the emitted light (Em) passes through the objective lens 8 and the dichroic mirror 5, is reflected by the mirror 11, is collected by the condenser lens 12, passes through the pinhole 13, and passes through the barrier filter 14.
- the pinhole 13 is arranged at a position conjugate with the focal position of the objective lens 8 as known to those skilled in the art. Only the light emitted from the focal region of the laser beam, that is, the excitation region as schematically shown, passes through the pinhole 13, and the light from other than the excitation region is blocked.
- the focal region of the laser beam illustrated in FIG. 1B is usually a light detection region in the present optical analyzer having an effective volume of about 1 to 10 fL (typically, the light intensity is in the region).
- the distribution is a substantially bell-shaped distribution (Gaussian distribution) with the center at the apex, and the effective volume is the volume of a substantially elliptical sphere with the boundary where the light intensity is 1 / e 2 of the center light intensity. It is called a confocal volume.
- the dimensions of the light detection region in the optical axis direction and the focal plane direction are determined by the diameter of the pinhole 13.
- the condition of the aperture diameter of the pinhole 13 is set so as to adjust the range in the optical axis direction of the photodetection region so that it can be limited as much as possible.
- the photodetector 16 is preferably an ultra-high light that can be used for photon counting.
- a sensitive photodetector is used.
- the time-series light intensity data is time-series photon count data.
- a stage position changing device 17a for moving the horizontal position of the microplate 9 may be provided on a microscope stage (not shown) in order to change the well 10 to be observed. The operation of the stage position changing device 17a may be controlled by the computer 18. With this configuration, it is possible to achieve quick measurement even when there are a plurality of specimens.
- a mechanism for scanning the sample solution with the light detection region that is, for moving the position of the focal region, that is, the light detection region in the sample solution.
- a mechanism for moving the position of the light detection region for example, a mirror deflector 17 that changes the direction of the reflection mirror 7 may be employed as schematically illustrated in FIG. A method of moving the absolute position of the light detection area).
- Such a mirror deflector 17 may be the same as a galvanometer mirror device provided in a normal laser scanning microscope.
- FIG. 1D the horizontal position of the container 10 (microplate 9) into which the sample solution is injected is moved to detect light in the sample solution.
- the stage position changing device 17a may be operated to move the relative position of the region (a method of moving the absolute position of the sample solution).
- the optical detection area is moved around the scanning trajectory by changing the optical path and moving the absolute position of the optical detection area.
- the position of the scanning trajectory of the photodetection area in may be moved along a predetermined movement path.
- the mirror deflector 17 or the stage position changing device 17a cooperates with the light detection by the light detector 16 under the control of the computer 18 in order to achieve a desired movement pattern of the position of the light detection region. Driven.
- the scanning trajectory of the position of the light detection region may be a closed circulation path such as a circle or an ellipse, and the movement path of the position of the sample solution is arbitrarily selected from a circle, an ellipse, a straight line, a curve, or a combination thereof (Various movement patterns may be selected in the program in the computer 18).
- the position of the light detection region may be moved in the vertical direction by moving the objective lens 8 or the stage up and down.
- a plurality of excitation light sources 2 may be provided as shown in the figure, and the wavelength of the excitation light may be appropriately selected according to the excitation wavelength of the luminescent particles.
- a plurality of photodetectors 16 may be provided, and when a plurality of types of light emitting particles having different wavelengths are included in the sample, light can be separately detected based on the wavelengths. It's okay.
- the computer 18 includes a CPU and a memory, and the CPU executes various arithmetic processes to execute the procedure of the present invention. Each procedure may be configured by hardware. All or a part of the processing described in the present embodiment may be executed by the computer 18 using a computer-readable storage medium storing a program for realizing the processing. That is, the computer 18 may realize the processing procedure of the present invention by reading a program stored in a storage medium and executing information processing / calculation processing.
- the computer-readable recording medium may be a magnetic disk, a magneto-optical disk, a CD-ROM, a DVD-ROM, a semiconductor memory, or the like.
- the above-mentioned program is distributed to a computer via a communication line. The computer that has received the distribution may execute the program.
- the excitation light Ex is passed through the beam shaping element 100 as described above.
- the light intensity distribution of the excitation light in the light detection region has a flattened profile in at least a part of the region including the center, that is, the central region, instead of a substantially bell-shaped profile.
- Patent Documents 9 to 12 basically drives a mechanism (mirror deflector 17) for moving the position of a light detection region to drive an optical path. Or by moving the horizontal position of the container 10 (microplate 9) into which the sample solution is injected, as schematically shown in FIG. In this case, light detection is performed while moving the position of the light detection region CV, that is, while scanning the sample solution by the light detection region CV.
- the light detection region CV moves (time t0 to t2 in the figure) and passes through the region where one light emitting particle exists (t1), light is emitted from the light emitting particle, A pulse-like signal having a significant light intensity (Em) appears on the time-series light intensity data as depicted in FIG.
- Em significant light intensity
- the movement of the position of the light detection region CV and the light detection are executed, and one pulse-like signal (a significant change in light intensity with time) as illustrated in FIG.
- the luminescent particles are individually detected, and by counting the number thereof, information on the number, concentration, or number density of the luminescent particles present in the measured region can be acquired.
- the light intensity distribution in the plane perpendicular to the optical axis of the excitation light in the photodetection region is usually obtained using a beam shaping element. From the substantially bell-shaped shape, the central region (region including the center and extending to a certain radius in the radial direction from the optical axis) has a flattened shape.
- the temporal change (pulse-shaped signal) of the light intensity value from the luminescent particles is not a normal substantially bell-shaped profile (dotted line in FIG. 2B), but the luminescent particles are in the central region of the light detection region.
- a profile (thick solid line in FIG. 2B) in which the corresponding region is flattened while passing through is drawn.
- the emission intensity Em (thick solid line) of the luminescent particle when the luminescent particle moves in the photodetection region is usually at the position of the luminescent particle in the photodetection region. Accordingly, it changes so as to draw a substantially bell-shaped profile similar to the intensity distribution of the excitation light Ex.
- the total amount of excitation light incident on the light detection region that is, the total energy is the same before and after the diameter is increased
- the excitation light in the light detection region when the diameter is increased The energy density is reduced, and especially in the region near the periphery, the light emitted from the luminescent particles becomes very weak, so the detection sensitivity of the luminescent particles is reduced (light detection without increasing the incident light quantity of excitation light).
- the photodetection area is expanded, the total amount of excitation light is increased.
- the light intensity distribution Ex (dashed line) of the excitation light is substantially bell-shaped as illustrated in FIG. The height and width are increased while maintaining the profile. Accordingly, the fluorescence intensity of the luminescent particles passing therethrough is expected to increase as the excitation light intensity increases, as depicted by Em ′ (dotted line: light quantity S2 ′) in FIG. Is done.
- Em ′ dotted line: light quantity S2 ′
- the luminous ability of the luminescent particles is limited, and when the excitation light intensity reaches a certain level, the increase in the fluorescence intensity of the luminescent particles is saturated even if the excitation light intensity further increases.
- the fluorescence intensity of the luminescent particles passing through the light detection region is such that, as depicted by the thick solid line in the figure, a profile in which the central region of the substantially bell-shaped shape is flattened is drawn. Become. That is, the amount of excitation light irradiated at an intensity higher than the excitation light intensity that reaches the limit of the luminous ability of the luminescent particles (the amount of excitation light indicated by v in the figure) is the emission of the luminescent particles. It can be said that the amount of light is unnecessary. Further, when excitation light is irradiated into the light detection region, noise light such as scattered light of water molecules is also emitted in proportion to the amount of light.
- the amount of excitation light that does not contribute to the light emission of the luminescent particles is not only unnecessary, but also increases noise light, and reduces the ratio of the amount of luminescent particles to the amount of noise light, that is, deteriorates the S / N ratio. Will be triggered.
- the diameter of the light detection region is X times
- the incident light amount of the excitation light is X 4 times
- the light amount of the noise light is also X 4 times.
- the excitation light intensity becomes X times and the movement distance becomes X times, so that it becomes X 2 times. Therefore, when the diameter of the photodetection region is increased by X times, the decrease in the S / N ratio is expected to be 1 / X 2 times. However, when the light-emitting ability of the light-emitting particles reaches the limit, the amount of light emitted from the light-emitting particles, will be less than 2 times X, so that the S / N ratio is reduced more than expected.
- the S / N ratio is about 0.7 times that before the enlargement of the light detection region if the emission intensity of the emission particles is not saturated, but the emission intensity of the emission particles. If there is saturation, the S / N ratio is further lowered.
- the beam shaping element 100 is disposed between the collimator 4 and the dichroic mirror 5 on the excitation light path, and is schematically shown in FIGS. 3 (E) and 3 (F). As shown in the figure, it is modified to have a profile in which a region FR in which the excitation light intensity distribution is flattened is formed in the central region in the light detection region. According to such a configuration, as shown in FIG. 3 (F), in the excitation light intensity distribution Ex (one-dot chain line), a substantially bell-shaped profile is shown as indicated by a white arrow. The intensity of the central region will be distributed to the surrounding region and will be relatively reduced (compared to the case of a substantially bell-shaped profile).
- the excitation light intensity in the central region in the light detection region is reduced as compared with the case where the same amount of excitation light is incident without using a beam shaping element and the light intensity distribution has a substantially bell-shaped profile, Since the excitation light intensity in the surrounding area increases, the amount of excitation light that does not contribute to the light emission of the light-emitting particles is reduced while the light-emitting particles are in the central region in the light detection region, During the passage from the outside of the central region to the peripheral region, the light intensity of the luminescent particles is increased.
- the beam shaping element 100 when the beam shaping element 100 is modified so that the excitation light intensity distribution has a flattened profile in the central region in the light detection area, compared to the case where the beam shaping element 100 is not used.
- the incident excitation light is more effectively used for light emission of the luminescent particles, and the S / N ratio is improved.
- the profile of the excitation light intensity distribution in the light detection region is corrected by the beam shaping element 100, the distribution profile in the light detection region is flattened so as not to increase the amount of noise light unnecessarily.
- the excitation light intensity in the region is adjusted to a level below which the light emission ability of the light emitting particles reaches the limit.
- the excitation light intensity at a level at which the luminous ability of the luminescent particles reaches the limit can also be determined in advance experimentally. For example, as described above, in the case where the diameter of the light detection region is X times, if the excitation light intensity distribution is flattened by the beam shaping element 100 and the emission intensity of the luminescent particles is not saturated, the S / N ratio is It is expected to recover to about 0.7 times before the expansion of the light detection area.
- the intensity distribution obtained by flattening the profile realized in the beam shaping element is generally obtained by transmitting the Gaussian beam through the diffraction grating and adjusting the optical path length so that interference unevenness does not occur on a predetermined surface. This is because interference unevenness occurs when the position deviates greatly from a predetermined plane.
- a surface changed from a state in which the central region of the excitation light intensity distribution is flattened is included in the range of the light detection region.
- the change in the light intensity of the luminescent particles is significantly different from the case of passing through the vicinity of the focal plane.
- the detection of the signal of the luminescent particles is performed when the time-varying profile of the light intensity on the time-series light intensity data is a predetermined profile. More specifically, when the luminous particle has a profile assumed when it passes through the light detection region, a temporal change in the light intensity is detected as a signal of the luminous particle.
- the profile of the temporal change in the light intensity assumed when the luminescent particles pass through the light detection region is typically the excitation light intensity distribution in the central region.
- a profile assumed for the luminescent particles that have passed near the flattened focal plane is employed.
- the range in the optical axis direction of the light detection region is limited to a region where the excitation light intensity distribution profile substantially coincides with the vicinity of the focal plane that is substantially flattened. .
- the range in the optical axis direction of the photodetection region is determined by the hole diameter of the pinhole along with the range in the direction perpendicular to the optical axis direction.
- the requirement is set based on the width in the optical axis direction of the objective lens in the region where the intensity distribution is substantially flattened.
- the pupil diameter of the objective lens is W [mm]
- the area of light passing through the condenser lens 12 on the pinhole 13 is ⁇ (W / 2 ⁇ Zi / (Zi + F2)) 2 (2)
- the pinhole aperture diameter is set according to the requirements determined by the diameter in the direction perpendicular to the optical axis direction of the light detection region and the optical axis direction of the objective lens in the region where the light intensity distribution of the excitation light is substantially flattened It may be made so that the smaller one of the requirements is satisfied based on the width of.
- FIG. 1A The embodiment of the optical analysis processing operation using the optical analysis device 1 according to the present invention illustrated in FIG. 1A is basically described in Patent Documents 9 to 12 or other cases by the applicant of the present application.
- the processing described in the patent application relating to the scanning molecular coefficient method may be arbitrarily used.
- the function of the excitation light intensity distribution is not a function having a substantially bell-shaped profile. Fitting is performed using a function having a profile similar to the profile.
- Specific processing operations typically include (1) preparation of a sample solution containing luminescent particles, (2) measurement processing of the light intensity of the sample solution, and (3) analysis processing of the measured light intensity. Is executed.
- FIG. 5 shows processing in the present embodiment expressed in the form of a flowchart.
- the particles to be observed in the optical analysis technique of the present invention are arbitrary as long as they are dispersed particles in the sample solution and move randomly in the solution, such as dissolved molecules.
- biomolecules such as proteins, peptides, nucleic acids, lipids, sugar chains, amino acids or aggregates thereof, viruses, cells, metal colloids, other non-biological molecules, etc. It's okay.
- a particle in which a luminescent label (fluorescent molecule, phosphorescent molecule) is added to the particle to be observed in an arbitrary manner is used.
- the sample solution is typically an aqueous solution, but is not limited thereto, and may be an organic solvent or any other liquid.
- the mirror deflector 17 and / or the stage position changing device 17a drive the mirror 7 (galvano mirror) and / or the microplate 9 on the stage of the microscope under the control of the processing operation according to the program of the computer 18. Then, the movement of the position of the light detection region is executed in the well 10, and at the same time, the light detector 16 converts the light sequentially detected into an electric signal and transmits it to the computer 18 to transmit it to the computer. In 18, time-series light intensity data is generated and stored from the transmitted signal in an arbitrary manner.
- the photodetector 16 is an ultra-sensitive photodetector that can detect the arrival of one photon, and therefore when the light detection is based on photon counting, the time-series light intensity data is a time-series data. It may be photon count data.
- the moving speed of the position of the light detection region during the measurement of the light intensity may be a predetermined speed that is arbitrarily set, for example, experimentally or so as to suit the purpose of analysis.
- the size or volume of the region through which the light detection region has passed is required, so that the movement distance can be grasped.
- the movement of the position of the light detection region is executed at.
- the movement speed is basically a constant speed.
- the present invention is not limited to this.
- the movement speed is preferably set to a value faster than the random movement of the luminescent particles, that is, the movement speed due to the Brownian movement.
- the observation target particle of the optical analysis technique of the present invention is a particle that is dispersed or dissolved in a solution and moves freely and randomly, the position moves with time by Brownian motion. Accordingly, when the moving speed of the position of the light detection region is slower than the movement of the particle due to Brownian motion, the particle moves randomly within the region as schematically illustrated in FIG.
- the moving speed of the position of the light detection region is the average moving speed (diffusion due to the Brownian motion of the particle) It is set faster than (moving speed).
- the moving speed of the position of the light detection region may be set to 15 mm / s or more, which is 10 times or more.
- the profile of the change in the light intensity by setting the moving speed of the position of the light detection region in various ways is expected (typically, the excitation light intensity distribution).
- a preliminary experiment for finding a condition that is substantially the same as that described above may be repeatedly performed to determine a suitable moving speed of the position of the light detection region.
- Such a profile is represented by a step function having the height A and the width T as parameters, or an expansion formula of an odd term of a sine wave as described below.
- f (t) A ⁇ 1 + sin (t / T) + (1/3) sin (3t / T) + (1/5) sin (5t / T) +... ⁇ (7) Therefore, in the time-series light intensity data, the height A and the width T calculated by fitting the expression (7) to a significant light intensity profile (profile that can be clearly determined not to be background) are as follows. When the light intensity profile is within the predetermined range, it is determined that the light intensity profile corresponds to the passage of one particle through the light detection region, and one light emitting particle may be detected.
- a signal whose height A and width T are out of a predetermined range is determined as a noise or foreign matter signal, and may be ignored in subsequent analysis or the like.
- smoothing is performed on the light intensity data (FIG. 6C, “detection result (unprocessed)” at the top stage).
- Is performed FIG. 5—Step 110, FIG. 6C, “Upper Smoothing”.
- the light emitted by the luminescent particles is probabilistically emitted, and data values may be lost in a very short time. Therefore, such a data value loss can be ignored by the smoothing process.
- the smoothing process may be performed by a moving average method, for example.
- the parameters for executing the smoothing process are the moving speed (scanning of the position of the light detection region at the time of acquiring the light intensity data) Speed) and BIN TIME may be set as appropriate.
- a primary differential value with respect to time of the light intensity data is calculated (step 120).
- the time differential value of the light intensity data has a large change in the value at the time of change of the signal value as illustrated in the lower “time differential” in FIG.
- the significant signal start and end points can be advantageously determined.
- step 130 significant pulse signals are sequentially detected on the light intensity data (steps 130 to 160). Specifically, first, the start and end points of one pulse signal are searched and determined sequentially on the time differential value data of the light intensity data to identify the pulse existence region. (Step 130). Once a single pulse presence region is identified, a function similar to the profile of the excitation light intensity distribution (“distribution shape function”) is fitted to the smoothed light intensity data in that pulse presence region. (FIG. 6C, “Distribution shape function fitting” in the lower part), parameters such as the intensity A and width T of the flat area of the distribution shape function, and the correlation coefficient (of the least square method) in the fitting are calculated. (Step 140).
- distributed shape function a function similar to the profile of the excitation light intensity distribution
- the calculated function parameter is within an assumed range for the profile parameter drawn by the pulse signal detected when one luminescent particle passes through the light detection region, that is, the distribution shape function It is determined whether the intensity A, the width T, and the correlation coefficient of the flat area are within predetermined ranges (step 150).
- the signal determined that the calculated parameter of the distribution shape function is within the range assumed in the signal corresponding to one luminescent particle is determined to be a signal corresponding to one luminescent particle, Thereby, one luminescent particle is detected.
- a pulse signal whose calculated distribution shape function parameter is not within the assumed range is ignored as noise. Note that the counting of the number of signals, that is, the counting of the luminescent particles may be performed simultaneously with the detection of the signal of the luminescent particles.
- the search and determination of the pulse signal in the processing of the above steps 130 to 150 may be repeatedly executed over the entire area of the light intensity data (step 160).
- each time-series light intensity data may be executed.
- the process which detects the signal of a luminescent particle separately from light intensity data is not restricted to said procedure, You may perform by arbitrary methods.
- the total volume of the region through which the photodetection region passes is further calculated by an arbitrary method. Then, the concentration of the luminescent particles in the sample can be determined from the volume value and the number of the luminescent particles.
- the total volume of the region through which the light detection region has passed may be determined, for example, in the manner described in Patent Documents 9 to 12.
- the light intensity distribution profile in the light detection region has a substantially constant excitation light intensity over a certain distance in the radial direction from the center to the optical axis. To be corrected.
- the excitation light intensity distribution has a substantially bell-shaped profile
- the amount of excitation light that has passed through the central area of the light detection area with excessive light intensity is distributed to the area outside the central area. Therefore, it is possible to increase the emission intensity of the luminescent particles in the region outside the central region when the photodetection region is enlarged. Therefore, compared with the case where the excitation light intensity distribution has a substantially bell-shaped profile, the emission intensity of the luminescent particles in the peripheral region of the light detection region is increased. It is also expected that the increase in total light quantity can be reduced.
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Abstract
Description
本発明は、共焦点顕微鏡の光学系などの溶液中の微小領域からの光が検出可能な光学系を用いて、溶液中に分散又は溶解した原子、分子又はこれらの凝集体(以下、これらを「粒子」と称する。)、例えば、タンパク質、ペプチド、核酸、脂質、糖鎖、アミノ酸若しくはこれらの凝集体などの生体分子、ウイルス、細胞などの粒子状の対象物、或いは、非生物学的な粒子からの光を検出して、それらの状態(相互作用、結合・解離状態など)の分析又は解析に於いて有用な情報を取得することが可能な光分析技術に係り、より詳細には、上記の如き光学系を用いて単一の発光する粒子からの光を個別に検出して種々の光分析を可能にする光分析装置に係る。なお、本明細書に於いて、光を発する粒子(以下、「発光粒子」と称する。)は、それ自身が光を発する粒子、又は、任意の発光標識若しくは発光プローブが付加された粒子のいずれであってもよく、発光粒子から発せられる光は、励起光の照射により発せられる蛍光、りん光等であってよい。 The present invention uses an optical system capable of detecting light from a minute region in a solution, such as an optical system of a confocal microscope, and uses atoms, molecules or aggregates thereof (hereinafter referred to as these) dispersed or dissolved in a solution. For example, biomolecules such as proteins, peptides, nucleic acids, lipids, sugar chains, amino acids or aggregates thereof, particulate objects such as viruses and cells, or non-biological The present invention relates to an optical analysis technique that can detect light from particles and obtain useful information in analysis or analysis of those states (interaction, binding / dissociation state, etc.). The present invention relates to an optical analysis apparatus that enables various optical analyzes by individually detecting light from a single light emitting particle using the optical system as described above. In the present specification, a particle that emits light (hereinafter referred to as “luminescent particle”) is either a particle that emits light itself, or a particle to which an arbitrary luminescent label or luminescent probe is added. The light emitted from the luminescent particles may be fluorescence, phosphorescence, etc. emitted by irradiation with excitation light.
近年の光計測技術の発展により、共焦点顕微鏡の光学系とフォトンカウンティング(1光子検出)も可能な超高感度の光検出技術とを用いて、一光子又は蛍光一分子レベルの微弱光の検出・測定が可能となっている。そこで、そのような微弱光の計測技術を用いて、生体分子等の特性、分子間相互作用又は結合・解離反応の検出を行う光分析技術が種々提案されている。そのような光分析技術としては、例えば、蛍光相関分光分析(Fluorescence Correlation Spectroscopy:FCS。例えば、特許文献1-3参照)、蛍光強度分布分析(Fluorescence-Intensity Distribution Analysis:FIDA。例えば、特許文献4)やフォトンカウンティングヒストグラム(Photon Counting Histogram:PCH。例えば、特許文献5)などが知られている。また、特許文献6~8には、共焦点顕微鏡の光学系を用いて計測される試料溶液の蛍光信号の時間経過に基づいて蛍光性物質を検出する方法が提案されている。
With the recent development of optical measurement technology, detection of weak light at the level of one photon or fluorescent single molecule using an optical system of a confocal microscope and an ultrasensitive photodetection technology capable of photon counting (one-photon detection)・ Measurement is possible. Thus, various photoanalysis techniques have been proposed for detecting characteristics of biomolecules, intermolecular interactions, or binding / dissociation reactions using such weak light measurement techniques. Such optical analysis techniques include, for example, fluorescence correlation spectroscopy (FCS; see, for example, Patent Document 1-3), fluorescence intensity distribution analysis (Fluorescence-Intensity Distribution Analysis: FIDA, for example,
更に、本願出願人は、特許文献9~12に於いて、共焦点顕微鏡又は多光子顕微鏡の光学系などの溶液中の微小領域からの光が検出可能な光学系を用いた光分析技術であって、FCS、FIDA等の光分析技術とは異なる原理による新規な光分析技術を提案した。かかる新規な光分析技術(以下、「走査分子計数法」と称する。)では、試料溶液内に於いて光の検出領域である微小領域(以下、「光検出領域」と称する。励起光が使用される場合には、励起光の集光領域に概ね一致する。)の位置を移動させながら、即ち、光検出領域により試料溶液内を走査しながら、光検出領域が試料溶液中に分散してランダムに運動する発光粒子を包含したときに、その発光粒子から発せられる光を個別に検出し、これにより、試料溶液中の発光粒子を一つずつ検出して、発光粒子のカウンティングや試料溶液中の発光粒子の濃度又は数密度に関する情報の取得が可能となる。
Further, the applicant of the present application described in
上記の「走査分子計数法」による発光粒子の検出に於いては、端的に述べれば、試料溶液に対して相対的に移動する光検出領域が発光粒子を一つずつ包含し、その発光粒子からの光が検出されて、発光粒子の存在が検出される。従って、単位時間当たりの発光粒子の検出可能数を高くしようとする場合には、光検出領域の移動速度を高くするか、光検出領域を拡大することが考えられる。しかしながら、光検出領域の移動速度を高くすると、一つの発光粒子が光検出領域内に包含される時間が短くなり、その発光粒子から得られる光量が低減し、検出感度或いは精度が低下することとなる。一方、光検出領域を拡大する場合、水分子のラマン散乱光など、観測対象となる発光粒子の光以外の光(以下、「ノイズ光」と称する。)の量が増大することとなり、やはり、検出感度或いは精度が低下することとなる。この点に関し、より詳細に説明すると、典型的には、光検出領域内の励起光の強度分布は、その中心に最大値を有し、周縁に向かって低減する略釣鐘状のプロファイルを有する。かかる光検出領域の大きさ(直径)をx倍したとすると、その体積がx3倍となり、励起光の総光量がそのままであると、単位体積当たりの励起光強度が低減し、特に、光検出領域の周縁に近い領域に於ける発光粒子の光が非常に弱くになって検出精度が低下してしまう。従って、光検出領域を拡大する際には、入射される励起光の総光量の増大も必要となる。その場合、光強度分布のプロファイルは、上記の如く、略釣鐘状であるので、光検出領域の中央領域の励起光強度は非常に高くなる。しかしながら、光検出領域を拡大しても、一時に検出される発光粒子の個数は一つであり、また、発光粒子の発光能(単位時間当たりの発光量の最大値)には限界があるので、発光粒子を励起する光の強度が増大しても、発光粒子の発光量が飽和域に達すると、発光粒子からの光の強度の増大は頭打ちとなる。即ち、光検出領域を拡大に伴って、入射される励起光の総光量を増大する際に、発光粒子の光強度が飽和するレベルを超える励起光強度が生ずる場合には、励起光強度が発光粒子の発光に寄与せず、ノイズ光を増やすだけとなり、発光粒子の検出感度或いは精度の更なる低下を惹起するだけとなる。 In the detection of luminescent particles by the above-mentioned “scanning molecule counting method”, in short, the light detection region that moves relative to the sample solution includes one luminescent particle at a time. Is detected, and the presence of the luminescent particles is detected. Therefore, in order to increase the detectable number of luminescent particles per unit time, it is conceivable to increase the moving speed of the light detection region or enlarge the light detection region. However, when the moving speed of the light detection region is increased, the time for which one light emitting particle is included in the light detection region is shortened, the amount of light obtained from the light emitting particle is reduced, and the detection sensitivity or accuracy is reduced. Become. On the other hand, when the photodetection area is enlarged, the amount of light other than the light of the luminescent particles to be observed (such as Raman scattered light of water molecules) (hereinafter referred to as “noise light”) increases. The detection sensitivity or accuracy will be reduced. In this regard, in more detail, typically, the intensity distribution of the excitation light within the light detection region has a substantially bell-shaped profile that has a maximum at the center and decreases toward the periphery. If the size of such an optical detection area (diameter) and the x times, its volume tripled x, the total light amount of the excitation light is directly reduces the excitation light intensity per unit volume, in particular, light The light emitted from the luminescent particles in the region close to the periphery of the detection region becomes very weak and the detection accuracy decreases. Therefore, when expanding the photodetection area, it is necessary to increase the total amount of incident excitation light. In that case, since the profile of the light intensity distribution is substantially bell-shaped as described above, the excitation light intensity in the central region of the light detection region is very high. However, even if the photodetection area is enlarged, the number of luminescent particles detected at one time is one, and the luminescent ability of the luminescent particles (the maximum amount of luminescence per unit time) is limited. Even if the intensity of the light that excites the luminescent particles increases, the increase in the intensity of the light from the luminescent particles reaches its peak when the light emission amount of the luminescent particles reaches the saturation range. That is, when the total amount of incident excitation light is increased as the photodetection area is enlarged, if the excitation light intensity exceeds the level at which the light intensity of the luminescent particles saturates, the excitation light intensity is emitted. It does not contribute to the light emission of the particles, but only increases the noise light, and causes only a further decrease in the detection sensitivity or accuracy of the light emitting particles.
ところで、上記の走査分子計数法に於いて計測される時系列の光強度データに於いて、光検出領域内を相対的に通過する発光粒子の光強度の時間変化のプロファイルは、典型的には、光検出領域内の励起光の強度分布に対応して略釣鐘状のプロファイルを有するところ、そのピーク近傍の中央領域は尖っていなくてもよく、発光粒子の光強度に対応する領域が特定の有意な光強度値列から成るプロファイルを有していれば、発光粒子の通過は検出可能である。また、上記の如く、或る励起光強度にて発光粒子の発光量が限界に達すると、励起光強度の更なる増大は、ノイズ光を増やすだけとなり、S/N比の悪化を惹起し得ることとなる。即ち、走査分子計数法に於いて、光検出領域の拡大をする場合、励起光強度が周縁領域に比して高い光検出領域の中央領域については、光検出領域の拡大に伴う励起光強度の増強は不要であるということができる。本発明に於いては、かかる知見が利用される。 By the way, in the time-series light intensity data measured in the scanning molecule counting method, the profile of the time change of the light intensity of the luminescent particles that pass relatively in the light detection region is typically , Having a substantially bell-shaped profile corresponding to the intensity distribution of the excitation light in the light detection region, the central region in the vicinity of the peak may not be sharp, and the region corresponding to the light intensity of the luminescent particles is a specific region. If it has a profile consisting of a significant sequence of light intensity values, the passage of luminescent particles can be detected. Further, as described above, when the emission amount of the luminescent particles reaches a limit at a certain excitation light intensity, the further increase in the excitation light intensity only increases the noise light, and may cause the S / N ratio to deteriorate. It will be. That is, in the scanning molecule counting method, when the photodetection area is enlarged, the excitation light intensity associated with the enlargement of the photodetection area is increased in the central area of the photodetection area where the excitation light intensity is higher than the peripheral area. It can be said that no enhancement is necessary. Such knowledge is used in the present invention.
かくして、本発明の主な課題は、走査分子計数法に於いて、単位時間当たりの発光粒子の検出可能数を高くすべく、光検出領域を拡大する場合に、ノイズ光の光量に対する発光粒子の光量の比の低減、即ち、S/N比の悪化の程度をできるだけ低く抑えられるよう改良された走査分子計数法のための光分析装置を提供することである。 Thus, the main problem of the present invention is that, in the scanning molecule counting method, when the photodetection area is enlarged in order to increase the detectable number of luminescent particles per unit time, An object of the present invention is to provide an optical analyzer for a scanning molecule counting method which is improved so as to reduce the ratio of the light amount, that is, the degree of deterioration of the S / N ratio as low as possible.
本発明によれば、上記の課題は、共焦点顕微鏡の光学系を用いて試料溶液中にて分散しランダムに運動する発光粒子からの光を検出する光分析装置であって、試料溶液内に於いて共焦点顕微鏡の光学系の光検出領域の位置を相対的に移動する光検出領域移動部と、光検出領域へ励起光を照射する光照射部と、光検出領域からの光を検出する光検出部と、試料溶液内に於いて光検出領域の位置を移動させながら光検出部にて検出された光検出領域からの光の時系列の光強度データを生成し、時系列の光強度データに於いて発光粒子の信号の各々を個別に検出する信号処理部とを含み、光照射部に於ける励起光の光路に於いて、光検出領域内の中心を含む少なくとも一部の領域内の励起光の光強度分布を実質的に平坦化するビーム整形素子が設けられている装置によって達成される。 According to the present invention, the above problem is an optical analyzer that detects light from luminescent particles that are dispersed in a sample solution and move randomly using an optical system of a confocal microscope, A light detection region moving unit that relatively moves the position of the light detection region of the optical system of the confocal microscope, a light irradiation unit that irradiates the light detection region with excitation light, and detects light from the light detection region Generate time-series light intensity data of light from the photodetection area detected by the photodetection section while moving the position of the photodetection section and the photodetection area in the sample solution. A signal processing unit that individually detects each signal of the luminescent particles in the data, and in the optical path of the excitation light in the light irradiation unit, in at least a part of the region including the center in the light detection region A beam-shaping element is provided to substantially flatten the light intensity distribution of the excitation light. It is achieved by its dependent device.
かかる構成に於いて、「試料溶液中にて分散しランダムに運動する発光粒子」とは、試料溶液中に分散又は溶解した原子、分子又はそれらの凝集体などの、光を発する粒子であって、基板などに固定されず、溶液中を自由にブラウン運動している粒子であれば任意の粒子であってよい。かかる発光粒子は、典型的には、蛍光性粒子であるが、りん光等の励起光の照射により光を発する粒子であってよい。共焦点顕微鏡の光学系の「光検出領域」とは、かかる顕微鏡に於いて光が検出される微小領域であり、対物レンズからの励起光が集光された領域に相当する。また、典型的には、光検出部は、所定の計測単位時間(ビンタイム)毎に到来する光子数を計数するフォトンカウンティングにより光検出領域からの光を検出し、その場合、時系列の光強度データが時系列のフォトンカウントデータとなる。なお、本明細書に於いて、「発光粒子の信号」という場合には、特に断らない限り、発光粒子からの光を表す信号を指すものとする。 In such a configuration, “a light-emitting particle dispersed in a sample solution and moving randomly” is a particle that emits light, such as atoms, molecules, or aggregates thereof dispersed or dissolved in a sample solution. Any particle may be used as long as it is not fixed to the substrate or the like and freely moves in the solution in Brownian motion. Such luminescent particles are typically fluorescent particles, but may be particles that emit light upon irradiation with excitation light such as phosphorescence. The “light detection region” of the optical system of the confocal microscope is a minute region where light is detected in the microscope, and corresponds to a region where excitation light from the objective lens is collected. Also, typically, the light detection unit detects light from the light detection region by photon counting that counts the number of photons that arrive every predetermined measurement unit time (bin time), and in this case, the light intensity in time series The data becomes time-series photon count data. In the present specification, the term “light emitting particle signal” refers to a signal representing light from the light emitting particles unless otherwise specified.
上記から理解される如く、本発明の基本的な構成である走査分子計数法に於いては、まず、試料溶液内に於いて光検出領域の位置を移動しながら、即ち、試料溶液内を光検出領域により走査しながら、逐次的に、光の検出が行われる。そうすると、試料溶液内にて移動する光検出領域が、ランダムに運動している発光粒子を包含したときには、発光粒子からの光が検出され、これにより、一つの発光粒子の存在が検出される。従って、逐次的に検出された光強度データに於いて発光粒子からの光の信号を個別に検出して、これにより、粒子の存在を一つずつ個別に逐次的に検出し、粒子の溶液内での状態に関する種々の情報が取得されることとなる。具体的なデータ処理としては、特許文献9~12の記載又は本願出願人によるその他の走査分子係数法に係る特許出願に記載の処理が任意に用いられてよい。
As understood from the above, in the scanning molecule counting method, which is the basic configuration of the present invention, first, the position of the photodetection region is moved in the sample solution, that is, the light is passed through the sample solution. Light is sequentially detected while scanning with the detection region. Then, when the light detection region that moves in the sample solution includes light emitting particles moving at random, the light from the light emitting particles is detected, thereby detecting the presence of one light emitting particle. Therefore, the light signals from the luminescent particles are detected individually in the sequentially detected light intensity data, thereby detecting the presence of the particles individually one by one, and in the solution of particles. Various information related to the state is acquired. As specific data processing, processing described in
上記の構成に於いて、本発明の装置では、特に、光照射部に於ける励起光の光路に於いて、光検出領域内の中心を含む少なくとも一部の領域内の励起光の光強度分布を実質的に平坦化するビーム整形素子が設けられる。かかるビーム整形素子が設けられると、光検出領域内の光強度分布のプロファイルは、その中心が最大値となる略釣鐘状ではなく、光検出領域の大きさに対するその中心を含む少なくとも一部の領域内の励起光の強度の増大が抑制された形状となるので、略釣鐘状のプロファイルの光検出領域を拡大した場合に比して、光検出領域の大きさに対する励起光の最大強度が低く抑えられることとなり、発光粒子の発光に寄与しない励起光の光量分を低減できることとなる。また、光検出領域内に於いて励起光の強度が実質的に最大となる領域が二次元の平面に延在することとなるので、励起光の最大強度が同じ略釣鐘状のプロファイルの光強度分布の場合に比して、一つの発光粒子が光検出領域内を通過する間に於いて強い信号がより長時間持続することとなり、より確実に発光粒子の信号が検出できるようになることが期待される。 In the above-described configuration, in the apparatus of the present invention, in particular, in the optical path of the excitation light in the light irradiation unit, the light intensity distribution of the excitation light in at least a part of the region including the center in the light detection region. Is provided with a beam shaping element for substantially flattening. When such a beam shaping element is provided, the profile of the light intensity distribution in the light detection region is not substantially bell-shaped with the center being the maximum value, but at least a part of the region including the center with respect to the size of the light detection region Therefore, the maximum intensity of the excitation light with respect to the size of the light detection area is kept lower than when the light detection area of the substantially bell-shaped profile is enlarged. As a result, the amount of excitation light that does not contribute to the light emission of the luminescent particles can be reduced. In addition, since the region where the excitation light intensity is substantially maximum in the light detection region extends in a two-dimensional plane, the light intensity of the substantially bell-shaped profile with the same maximum excitation light intensity. Compared to the case of distribution, a strong signal persists for a longer time while one luminescent particle passes through the light detection region, and the signal of the luminescent particle can be detected more reliably. Be expected.
ところで、上記の構成に於いて、光検出領域内の光強度分布のプロファイルは、その中心から光軸に対して放射方向の或る距離に亘って励起光強度が略一定となるので、光検出領域内を通過する一つの発光粒子の発する光の強度の時間変化は、特許文献9~12の場合と異なり、もはや、略釣鐘状ではなくなる。従って、本発明の場合には、信号処理部は、光検出領域内の中心を含む少なくとも一部の領域内に於いて実質的に平坦化された励起光の光強度分布のプロファイルに対応するプロファイルを有する光強度の時間変化を一つの発光粒子の光信号として個別に検出するよう構成されてよい。光検出領域内の中心を含む少なくとも一部の領域内に於いて実質的に平坦化された励起光の光強度分布のプロファイルは、予め、実験的に又は理論的に決定可能である。かかる一部が実質的に平坦化された励起光の光強度分布に対応する発光粒子の光強度の時間変化のプロファイルの表式は、実施形態の欄に於いて説明される。
By the way, in the above configuration, the profile of the light intensity distribution in the light detection region is such that the excitation light intensity is substantially constant over a certain distance in the radial direction from the center to the optical axis. Unlike the cases of
上記に於いて、ビーム整形素子としては、典型的には、回折格子を用いてガウシアンビームを、光軸に対して垂直な或る面に於いて、その中心から光軸に対して放射方向の或る距離に亘ってビームの光強度を実質的に一定する素子が採用される。その場合、対物レンズの焦点面に於いて光強度が略一定となるように、ビーム整形素子の励起光光路上の位置を決定すると、後述の如く、対物レンズの焦点面から光軸に沿って或る程度の距離が離れた位置の光強度分布のプロファイルは、対物レンズの焦点面に於けるプロファイルとは異なるものとなることが分かっている。そして、そのような光強度分布のプロファイルが対物レンズの焦点面に於ける光検出領域内の中心を含む少なくとも一部の領域内に於いて実質的に平坦化されたプロファイルと許容できないほど異なっている領域を通過した発光粒子の光が光検出部に進入する場合、その発光粒子の光は、発光粒子の信号として検出されない可能性が高いが、その分、光強度データ上に於いて、ノイズが増えることとなり、S/N比が悪化することとなる。従って、上記の装置に於いては、対物レンズの光軸に沿って、光強度分布のプロファイルが対物レンズの焦点面でのプロファイルと許容できないほど異なっている領域からの光が光検出部に到達することをできるだけ制限することが好ましい。即ち、対物レンズの光軸方向に於ける光検出領域の大きさは、励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅よりも小さくなるように調節されることが好ましいこととなる。この点に関し、光学系の対物レンズの焦点位置の共役の位置に配置されるピンホールの開口径は、対物レンズの焦点面に平行な方向の光検出領域の大きさだけでなく、光検出領域の光軸方向に於ける大きさ、即ち、光検出部に光が到達する範囲も決定する。従って、光学系の対物レンズの焦点位置の共役の位置に配置されるピンホールの開口径は、励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅も参照して決定されるようになっていてよい。即ち、上記の本発明の装置に於いては、好適には、光学系の対物レンズの焦点位置の共役の位置に配置されるピンホールの開口径が、励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅に基づいて設定されてよい。 In the above, the beam shaping element typically uses a diffraction grating to emit a Gaussian beam in a radial direction from the center to the optical axis in a plane perpendicular to the optical axis. An element is employed that substantially constants the light intensity of the beam over a certain distance. In this case, when the position of the beam shaping element on the excitation light optical path is determined so that the light intensity is substantially constant at the focal plane of the objective lens, as will be described later, the focal plane of the objective lens is moved along the optical axis. It has been found that the profile of the light intensity distribution at a certain distance is different from the profile at the focal plane of the objective lens. And the profile of such light intensity distribution is unacceptably different from the substantially flattened profile in at least some areas including the center in the light detection area in the focal plane of the objective lens. When the light emitted from the light-emitting particles that has passed through the area enters the light detection unit, it is highly likely that the light from the light-emitting particles will not be detected as a signal from the light-emitting particles. Will increase and the S / N ratio will deteriorate. Therefore, in the above apparatus, light from a region where the profile of the light intensity distribution is unacceptably different from the profile at the focal plane of the objective lens along the optical axis of the objective lens reaches the light detection unit. It is preferable to limit as much as possible. In other words, the size of the light detection area in the optical axis direction of the objective lens is adjusted so that the light intensity distribution of the excitation light is smaller than the width in the optical axis direction of the objective lens in the area where the light intensity distribution is substantially flattened. It will be preferable to be done. In this regard, the aperture diameter of the pinhole arranged at the conjugate position of the focal position of the objective lens of the optical system is not only the size of the light detection area in the direction parallel to the focal plane of the objective lens, but also the light detection area. The size in the optical axis direction, that is, the range in which the light reaches the light detection unit is also determined. Therefore, the aperture diameter of the pinhole arranged at the conjugate position of the focal position of the objective lens of the optical system is also the width in the optical axis direction of the objective lens in the region where the light intensity distribution of the excitation light is substantially flattened. It may be determined by reference. That is, in the above-described apparatus of the present invention, preferably, the aperture diameter of the pinhole disposed at the conjugate position of the focal position of the objective lens of the optical system is substantially equal to the light intensity distribution of the excitation light. It may be set based on the width in the optical axis direction of the objective lens in the flattened region.
実施の形態に於いて、光検出領域内の中心を含む少なくとも一部の領域内の励起光の光強度分布を実質的に平坦化する理由は、或る状態から、光検出領域を拡大するとともに励起光の入射光量を増大した場合に、これに伴う光検出領域内の中央領域の励起光の強度の増大を抑制するためである。従って、上記の構成に於いて、好適には、ビーム整形素子が用いられた場合の光検出領域内の励起光の強度は、励起光入射光量が同じであり且つビーム整形素子が用いられていない場合よりも低減されるように励起光の強度が調節される。なお、上記の如く、ビーム整形素子を用いて励起光の光強度分布を修正する理由は、励起光強度が発光粒子の発光能の限界を超えて無駄に高くなることを回避するためである。従って、励起光が無駄に入射されることを回避するためには、より好適には、ビーム整形素子が用いられた場合の光検出領域内の光強度分布が平坦化された領域の励起光強度は、発光粒子の発光能が限界に達する最小の強度に調節されることが望ましいが、これに限定されない。或る励起光強度に於いて、発光粒子の発光能が限界しているか否かは、実験的に確認可能である。 In the embodiment, the reason why the light intensity distribution of the excitation light in at least a part of the region including the center in the light detection region is substantially flattened is that the light detection region is enlarged from a certain state. This is because when the incident light quantity of the excitation light is increased, an increase in the intensity of the excitation light in the central area in the light detection area is suppressed. Therefore, in the above configuration, preferably, when the beam shaping element is used, the intensity of the excitation light in the light detection region is the same as the incident light amount of the excitation light and the beam shaping element is not used. The intensity of the excitation light is adjusted so as to be reduced as compared with the case. As described above, the reason why the light intensity distribution of the excitation light is corrected using the beam shaping element is to avoid that the intensity of the excitation light exceeds the limit of the luminous ability of the luminescent particles and becomes unnecessarily high. Therefore, in order to avoid unnecessary excitation light being incident, more preferably, the excitation light intensity in the region where the light intensity distribution in the light detection region is flattened when the beam shaping element is used. Is preferably adjusted to the minimum intensity at which the luminous ability of the luminescent particles reaches a limit, but is not limited thereto. It can be experimentally confirmed whether or not the luminous ability of the luminescent particles is limited at a certain excitation light intensity.
上記の本発明の光分析技術は、典型的には、タンパク質、ペプチド、核酸、脂質、糖鎖、アミノ酸若しくはこれらの凝集体などの生体分子、ウイルス、細胞などの粒子状の生物学的な対象物の溶液中の状態の分析又は解析の用途に用いられるが、非生物学的な粒子(例えば、原子、分子、ミセル、金属コロイドなど)の溶液中の状態の分析又は解析に用いられてもよく、そのような場合も本発明の範囲に属することは理解されるべきである。試料溶液に対する光検出領域の位置の移動方法及び態様、時系列光強度データに於ける光強度値から各発光粒子の信号の抽出若しくは検出する方法及び態様、絶対な濃度値を決定するためのパラメータを決定する方法及び態様等は、特許文献9~12等に記載されている方法及び態様と同様であってよい。
The optical analysis technique of the present invention described above is typically a biological molecule such as a protein, peptide, nucleic acid, lipid, sugar chain, amino acid or aggregate thereof, or a particulate biological object such as a virus or cell. It is used for analysis or analysis of the state of matter in solution, but it may also be used for analysis or analysis of the state of non-biological particles (eg, atoms, molecules, micelles, metal colloids, etc.) in solution. It should be understood that such cases are also within the scope of the present invention. Method and mode of moving the position of the light detection region with respect to the sample solution, method and mode of extracting or detecting the signal of each luminescent particle from the light intensity value in the time-series light intensity data, parameters for determining the absolute concentration value The method and aspect for determining the value may be the same as the method and aspect described in
かくして、上記の本発明の構成によれば、既に触れた如く、ビーム整形素子を用いることによって、光検出領域内の光強度分布のプロファイルが、その中心から光軸に対して放射方向の或る距離に亘って励起光強度が略一定となるので、光検出領域の拡大と励起光入射光量の増大を行う場合に、光検出領域の中央領域の励起光の強度を過剰に高くなってしまうといったことを回避できることとなる。そして、ビーム整形素子を用いない場合に比して、発光粒子の発光量の増大に寄与しない励起光の光量を低く抑えられることから、S/N比の悪化を低く抑えつつ、光検出領域の範囲を拡大し、これにより、単位時間当たりの発光粒子の検出可能数を高くすることが可能となる。特に、走査分子係数法では、これまでは、試料溶液内の発光粒子の濃度が低いと、解析に必要な数の発光粒子の検出に比較的長い時間を要していたが、本発明によれば、S/N比の悪化の程度が低く抑えられた状態で、走査分子係数法による光計測の時間を短縮できることが期待される。 Thus, according to the configuration of the present invention described above, as already mentioned, by using the beam shaping element, the profile of the light intensity distribution in the light detection region has a certain radial direction from the center to the optical axis. Since the excitation light intensity becomes substantially constant over the distance, the intensity of the excitation light in the center area of the light detection area becomes excessively high when the light detection area is enlarged and the excitation light incident light quantity is increased. This can be avoided. And since the light quantity of the excitation light which does not contribute to the increase in the light emission amount of the light emitting particles can be suppressed as compared with the case where the beam shaping element is not used, the deterioration of the S / N ratio is kept low, and the light detection region. By expanding the range, it becomes possible to increase the number of detectable luminescent particles per unit time. In particular, in the scanning molecular coefficient method, until now, when the concentration of the luminescent particles in the sample solution was low, it took a relatively long time to detect the number of luminescent particles necessary for the analysis. For example, it is expected that the optical measurement time by the scanning molecular coefficient method can be shortened in a state where the degree of deterioration of the S / N ratio is kept low.
本発明のその他の目的及び利点は、以下の本発明の好ましい実施形態の説明により明らかになるであろう。 Other objects and advantages of the present invention will become apparent from the following description of preferred embodiments of the present invention.
1…光分析装置(共焦点顕微鏡)
2…光源
3…シングルモードオプティカルファイバー
4…コリメータレンズ
5…ダイクロイックミラー
6、7、11…反射ミラー
8…対物レンズ
9…マイクロプレート
10…ウェル(試料溶液容器)
12…コンデンサレンズ
13…ピンホール素子
13…ピンホール開孔
14…バリアフィルター
14a…ダイクロイックミラー又は偏光ビームスプリッタ
15…マルチモードオプティカルファイバー
16…光検出器
17…ミラー偏向器
17a…ステージ位置変更装置
18…コンピュータ
1 ... Optical analyzer (confocal microscope)
DESCRIPTION OF
DESCRIPTION OF
以下、本発明の好ましい実施形態について詳細に説明する。 Hereinafter, preferred embodiments of the present invention will be described in detail.
光分析装置の構成
本発明による光分析技術を実現する光分析装置は、基本的な構成に於いて、図1(A)に模式的に例示されている如き、特許文献9~12に記載の走査分子計数法が実行可能な共焦点顕微鏡の光学系と光検出器とを組み合わせてなる装置であってよい。同図を参照して、光分析装置1は、光学系2~17と、光学系の各部の作動を制御すると共にデータを取得し解析するためのコンピュータ18とから構成される。光分析装置1の光学系は、通常の共焦点顕微鏡の光学系と同様であってよく、そこに於いて、光源2から放射されシングルモードファイバー3内を伝播したレーザー光(Ex)が、ファイバーの出射端に於いて固有のNAにて決まった角度にて発散する光となって放射され、コリメーター4によって平行光となり、ダイクロイックミラー5、反射ミラー6、7にて反射され、対物レンズ8へ入射される。なお、後述の如く、本発明の装置に於いては、コリメーター4とダイクロイックミラー5との間にビーム整形素子100が挿入される(例えば、ドイツ国のアドルオプティカ・オプティカル・システムズ社(AdlOptica Optical Systems GmbH)製のFocal-πShaper等が利用可能である。)。そして、対物レンズ8の上方には、典型的には、1~数十μLの試料溶液が分注される試料容器又はウェル10が配列されたマイクロプレート9が配置されており、対物レンズ8から出射したレーザー光は、試料容器又はウェル10内の試料溶液中で焦点を結び、光強度の強い領域(励起領域)が形成される。試料溶液中には、観測対象物である発光粒子、典型的には、蛍光性粒子又は蛍光色素等の発光標識が付加された粒子が分散又は溶解されており、かかる発光粒子が励起領域に進入すると、その間、発光粒子が励起され光が放出される。放出された光(Em)は、対物レンズ8、ダイクロイックミラー5を通過し、ミラー11にて反射してコンデンサレンズ12にて集光され、ピンホール13を通過し、バリアフィルター14を透過して(ここで、特定の波長帯域の光成分のみが選択される。)、マルチモードファイバー15に導入されて、光検出器16に到達し、時系列の電気信号に変換された後、コンピュータ18へ入力され、後に説明される態様にて光分析のための処理が為される。
Configuration of Optical Analysis Apparatus An optical analysis apparatus that realizes the optical analysis technique according to the present invention has a basic configuration described in
なお、上記の構成に於いて、ピンホール13は、当業者に於いて知られている如く、対物レンズ8の焦点位置と共役の位置に配置されており、これにより、図1(B)に模式的に示されている如きレーザー光の焦点領域、即ち、励起領域内から発せられた光のみがピンホール13を通過し、励起領域以外からの光は遮断される。図1(B)に例示されたレーザー光の焦点領域は、通常、1~10fL程度の実効体積を有する本光分析装置に於ける光検出領域であり(典型的には、光強度が領域の中心を頂点とする略釣鐘状の分布(ガウス様分布)となる。実効体積は、光強度が中心光強度の1/e2となる面を境界とする略楕円球体の体積である。)、コンフォーカル・ボリュームと称される。かかる光検出領域の光軸方向と焦点面方向の寸法は、ピンホール13の開孔径によって決定される。この点に関し、後に詳細に説明される如く、本発明に於いては、励起光の光強度分布のプロファイルが対物レンズの焦点面でのプロファイルと許容できないほど異なっている領域からの光が光検出部に到達することをできるだけ制限できるように光検出領域の光軸方向の範囲を調節するべく、ピンホール13の開孔径の条件が設定される。
In the above configuration, the
また、本発明では、1つの発光粒子からの光、例えば、一つの蛍光色素分子からの微弱光が検出されるので、光検出器16としては、好適には、フォトンカウンティングに使用可能な超高感度の光検出器が用いられる。光の検出がフォトンカウンティングによる場合、光強度の測定は、所定時間に亘って、逐次的に、計測単位時間(BIN TIME)毎に、光検出器に到来するフォトンの数を計測する態様にて実行される。従って、この場合、時系列の光強度のデータは、時系列のフォトンカウントデータである。また、顕微鏡のステージ(図示せず)には、観察するべきウェル10を変更するべく、マイクロプレート9の水平方向位置を移動するためのステージ位置変更装置17aが設けられていてよい。ステージ位置変更装置17aの作動は、コンピュータ18により制御されてよい。かかる構成により、検体が複数在る場合にも、迅速な計測が達成可能となる。
Further, in the present invention, light from one luminescent particle, for example, faint light from one fluorescent dye molecule is detected. Therefore, the
更に、上記の光分析装置の光学系に於いては、試料溶液内を光検出領域により走査する、即ち、試料溶液内に於いて焦点領域、即ち、光検出領域の位置を移動するための機構が設けられる。かかる光検出領域の位置を移動するための機構としては、例えば、図1(C)に模式的に例示されている如く、反射ミラー7の向きを変更するミラー偏向器17が採用されてよい(光検出領域の絶対的な位置を移動する方式)。かかるミラー偏向器17は、通常のレーザー走査型顕微鏡に装備されているガルバノミラー装置と同様であってよい。或いは、別の態様として、図1(D)に例示されている如く、試料溶液が注入されている容器10(マイクロプレート9)の水平方向の位置を移動し、試料溶液内に於ける光検出領域の相対的な位置を移動するべくステージ位置変更装置17aが作動されてもよい(試料溶液の絶対的な位置を移動する方式)。また、上記の光路を変更して光検出領域の絶対的な位置を移動する方式によって光検出領域を走査軌道に沿って周回移動させると同時に、試料溶液の位置を移動する方式により、試料溶液内に於ける光検出領域の走査軌道の位置が所定の移動経路に沿って移動されてもよい。いずれの方式による場合も、所望の光検出領域の位置の移動パターンを達成するべく、ミラー偏向器17又はステージ位置変更装置17aは、コンピュータ18の制御の下、光検出器16による光検出と協調して駆動される。光検出領域の位置の走査軌道は、円形、楕円形等の閉じた循環経路であってよく、試料溶液の位置の移動経路は、円形、楕円形、直線、曲線又はこれらの組み合わせから任意に選択されてよい(コンピュータ18に於けるプログラムに於いて、種々の移動パターンが選択できるようになっていてよい。)。なお、図示していないが、対物レンズ8又はステージを上下に移動することにより、光検出領域の位置が上下方向に移動されるようになっていてもよい。
Further, in the optical system of the above optical analyzer, a mechanism for scanning the sample solution with the light detection region, that is, for moving the position of the focal region, that is, the light detection region in the sample solution. Is provided. As a mechanism for moving the position of the light detection region, for example, a
更に、光分析装置1に於いては、図示の如く、複数の励起光源2が設けられていてよく、発光粒子の励起波長によって適宜、励起光の波長が選択できるようになっていてよい。同様に、光検出器16も複数個備えられていてよく、試料中に波長の異なる複数種の発光粒子が含まれている場合に、それらから光をその波長によって別々に検出できるようになっていてよい。
Furthermore, in the
コンピュータ18は、CPUおよびメモリを備え、CPUが各種演算処理を実行することにより、本発明の手順を実行する。なお、各手順は、ハードウェアにより構成するようにしてもよい。本実施形態で説明される処理の全て或いは一部は、それらの処理を実現するプログラムを記憶したコンピュータ読み取り可能な記憶媒体を用いて、コンピュータ18により実行されてよい。即ち、コンピュータ18は、記憶媒体に記憶されているプログラムを読み出して、情報の加工・演算処理を実行することにより、本発明の処理手順を実現するようになっていてよい。ここで、コンピュータ読み取り可能な記録媒体とは、磁気ディスク、光磁気ディスク、CD-ROM、DVD-ROM、半導体メモリ等であってよく、或いは、上記のプログラムを通信回線によってコンピュータに配信し、この配信を受けたコンピュータがプログラムを実行するようにしても良い。
The
本発明の光分析技術の原理
「発明の概要」の欄に記載されている如く、本発明の光分析装置に於いては、上記に触れた如く、励起光Exをビーム整形素子100に通すことにより、光検出領域内の励起光の光強度分布が、略釣鐘状のプロファイルではなく、中心を含む少なくとも一部の領域、即ち、中央領域に於いて平坦化されたプロファイルを有することとなる。これにより、光検出領域の大きさと励起光Exの入射光量とを増大した際に、不要な中央領域の励起光強度の増大が回避され、S/N比(ノイズ光の強さに対する発光粒子の光の強さの比)の悪化の程度をできるだけ低く抑えられることとなる。以下、走査分子計数法の原理と本発明によるビーム整形素子を用いた新規な構成にについて説明する。
As described in the “Summary of Invention” section of the principle of the optical analysis technique of the present invention, in the optical analysis apparatus of the present invention, the excitation light Ex is passed through the
1.走査分子計数法の原理
「走査分子計数法」(特許文献9~12)では、基本的には、光検出領域の位置を移動するための機構(ミラー偏向器17)を駆動して光路を変更し、或いは、試料溶液が注入されている容器10(マイクロプレート9)の水平方向の位置を移動して、図2(A)にて模式的に描かれているように、試料溶液内に於いて光検出領域CVの位置を移動しながら、即ち、光検出領域CVにより試料溶液内を走査しながら、光検出が実行される。そうすると、例えば、光検出領域CVが移動する間(図中、時間t0~t2)に於いて1つの発光粒子の存在する領域を通過する際(t1)には、発光粒子から光が放出され、図2(B)に描かれている如き時系列の光強度データ上に有意な光強度(Em)のパルス状の信号が出現することとなる。かくして、上記の光検出領域CVの位置の移動と光検出を実行し、その間に出現する図2(B)に例示されている如きパルス状の信号(有意な光強度の時間変化)を一つずつ検出することによって、発光粒子が個別に検出され、その数をカウントすることにより、計測された領域内に存在する発光粒子の数、或いは、濃度若しくは数密度に関する情報が取得できることとなる。かかる走査分子計数法の原理に於いては、蛍光強度のゆらぎの算出の如き統計的な演算処理は行われず、発光粒子が一つずつ検出されるので、FCS、FIDA等では十分な精度にて分析ができないほど、観測されるべき粒子の濃度が低い試料溶液でも、粒子の濃度若しくは数密度に関する情報が取得可能である。なお、以下に詳細に説明される如く、本発明に於いては、ビーム整形素子を用いて、光検出領域内に於ける励起光の、光軸に垂直な面内の光強度分布が、通常の略釣鐘型形状から中央領域(中心を含み光軸から放射方向に或る半径まで延在する領域)が平坦化された形状を有することとなる。従って、発光粒子からの光強度値の時間変化(パルス状の信号)も、通常の略釣鐘型形状のプロファイル(図2(B)中の点線)ではなく、発光粒子が光検出領域の中央領域を通過する間に対応する領域が平坦化されたプロファイル(図2(B)中の太実線)を描くこととなる。
1. Principle of Scanning Molecule Counting Method “Scanning Molecule Counting Method” (
2.中央領域が平坦化された光強度分布の形成と作用効果
図3(A)、図3(B)を参照して、「発明の概要」の欄に於いて触れた如く、共焦点顕微鏡の光検出領域内の励起光Exの強度分布(特に断らない限り、中心の光軸方向に対して放射方向の強度分布をいうものとする。)は、典型的には、図示の如く、光軸上の中心に最大値を有し、周縁に向かって低減する略釣鐘状のプロファイル(一点鎖線Ex)を有する。従って、走査分子計数法の実行の際に、発光粒子が光検出領域内を移動する際の発光粒子の発光強度Em(太実線)も、通常、光検出領域内でのその発光粒子の位置に応じて、励起光Exの強度分布と同様の略釣鐘状のプロファイルを描くように変化することとなる。
2. Formation and operation effect of light intensity distribution with flattened central region Referring to FIG. 3 (A) and FIG. 3 (B), as mentioned in the “Summary of the invention” column, the light of the confocal microscope The intensity distribution of the excitation light Ex in the detection region (unless otherwise specified, the intensity distribution in the radial direction with respect to the central optical axis direction) is typically on the optical axis as shown in the figure. And has a substantially bell-shaped profile (dotted line Ex) that decreases toward the periphery. Therefore, when the scanning molecule counting method is executed, the emission intensity Em (thick solid line) of the luminescent particle when the luminescent particle moves in the photodetection region is usually at the position of the luminescent particle in the photodetection region. Accordingly, it changes so as to draw a substantially bell-shaped profile similar to the intensity distribution of the excitation light Ex.
ところで、上記の走査分子計数法に於いて、単位時間当たりの発光粒子の検出可能数を大きくするためには、光検出領域を拡大することが考えられる。例えば、光検出領域の直径を、図3(A)の直径d1から図3(C)の直径d2(=X・d1)へ拡大すれば、光検出領域の移動方向に垂直な断面積がX2倍となるので、単位時間当たりに包含される発光粒子の数がX2倍となることが期待される。その際、光検出領域へ入射される励起光の総量、即ち、総エネルギーが、直径を大きくする前と後とで同じであると、直径が大きくなった場合の光検出領域内の励起光のエネルギー密度が低減してしまい、特に、周縁に近い領域では、発光粒子の光が非常に弱くなるので、発光粒子の検出感度が低下することとなる(励起光の入射光量を上げずに光検出領域の拡大をした場合、周縁付近の発光粒子の光とノイズとの区別が困難となり、結局、発光粒子が検出できないため、光検出領域の拡大の意味がなくなってしまう。)。そこで、光検出領域の拡大の際には、それと伴に、励起光の総光量の増大が為される。 By the way, in the above scanning molecule counting method, in order to increase the detectable number of luminescent particles per unit time, it is conceivable to enlarge the light detection region. For example, if the diameter of the light detection region is increased from the diameter d1 in FIG. 3A to the diameter d2 (= X · d1) in FIG. 3C, the cross-sectional area perpendicular to the moving direction of the light detection region is X. because the 2-fold, it is expected that the number of light-emitting particles encompassed per unit time is doubled X. At this time, if the total amount of excitation light incident on the light detection region, that is, the total energy is the same before and after the diameter is increased, the excitation light in the light detection region when the diameter is increased The energy density is reduced, and especially in the region near the periphery, the light emitted from the luminescent particles becomes very weak, so the detection sensitivity of the luminescent particles is reduced (light detection without increasing the incident light quantity of excitation light). When the area is enlarged, it becomes difficult to distinguish the light and noise of the luminescent particles near the periphery, and eventually the luminescent particles cannot be detected, so the meaning of expanding the light detection area is lost.) Therefore, when the photodetection area is expanded, the total amount of excitation light is increased.
上記の如く、光検出領域の拡大と励起光の総光量の増大を行った場合、図3(D)に描かれている如く、励起光の光強度分布Ex(一点鎖線)は、略釣鐘状のプロファイルを維持した状態で高さと幅が増大されることとなる。従って、そこを通過する発光粒子の蛍光強度も、図3(D)中のEm’(点線:光量S2’)にて描かれている如く、励起光強度の増大と伴に増大することが期待される。しかしながら、実際には、発光粒子の発光能には限界があり、励起光強度が或る程度に達すると、それ以上、励起光強度が増大しても、発光粒子の蛍光強度の増大が飽和し(頭打ちとなる。)、光検出領域を通過する発光粒子の蛍光強度は、図中の太実線にて描かれている如く、略釣鐘状形状の中央領域が平坦になったプロファイルを描くこととなる。即ち、発光粒子の発光能を限界に到達させる励起光強度よりも高い強度にて照射される励起光の光量(図中vにて示されている励起光の光量分)は、発光粒子の発光に寄与せず、不要な光量分であるということができる。また、光検出領域内へ励起光が照射されると、その光量に比例して、水分子の散乱光などのノイズ光も発せられる。従って、発光粒子の発光に寄与しない励起光の光量は、不要であるだけでなく、ノイズ光を増大し、ノイズ光の光量に対する発光粒子の光量の比の低減、即ち、S/N比の悪化を惹起することとなる。例えば、光検出領域の径をX倍にする場合、励起光の光強度分布のプロファイルを維持したままと仮定すると、励起光の入射光量は、X4倍となるので、ノイズ光の光量もX4倍となる。一方、発光粒子の発光量は、その発光能が限界に達していないと仮定すると、励起光強度がX倍となり、移動距離がX倍となるので、X2倍となる。従って、光検出領域の径をX倍にする場合には、S/N比の低下は、1/X2倍となることが予想される。しかしながら、発光粒子の発光能が限界に達すると、発光粒子の発光量は、X2倍を下回ることとなり、S/N比が予想以上に低下することとなる。例えば、X=1.2であれば、S/N比は、発光粒子の発光強度の飽和がなければ、光検出領域の拡大前の約0.7倍程度となるが、発光粒子の発光強度の飽和があると、S/N比が更に低くなる。 As described above, when the photodetection area is expanded and the total amount of excitation light is increased, the light intensity distribution Ex (dashed line) of the excitation light is substantially bell-shaped as illustrated in FIG. The height and width are increased while maintaining the profile. Accordingly, the fluorescence intensity of the luminescent particles passing therethrough is expected to increase as the excitation light intensity increases, as depicted by Em ′ (dotted line: light quantity S2 ′) in FIG. Is done. However, in practice, the luminous ability of the luminescent particles is limited, and when the excitation light intensity reaches a certain level, the increase in the fluorescence intensity of the luminescent particles is saturated even if the excitation light intensity further increases. (It becomes a peak.) The fluorescence intensity of the luminescent particles passing through the light detection region is such that, as depicted by the thick solid line in the figure, a profile in which the central region of the substantially bell-shaped shape is flattened is drawn. Become. That is, the amount of excitation light irradiated at an intensity higher than the excitation light intensity that reaches the limit of the luminous ability of the luminescent particles (the amount of excitation light indicated by v in the figure) is the emission of the luminescent particles. It can be said that the amount of light is unnecessary. Further, when excitation light is irradiated into the light detection region, noise light such as scattered light of water molecules is also emitted in proportion to the amount of light. Therefore, the amount of excitation light that does not contribute to the light emission of the luminescent particles is not only unnecessary, but also increases noise light, and reduces the ratio of the amount of luminescent particles to the amount of noise light, that is, deteriorates the S / N ratio. Will be triggered. For example, in the case where the diameter of the light detection region is X times, assuming that the profile of the light intensity distribution of the excitation light is maintained, the incident light amount of the excitation light is X 4 times, so the light amount of the noise light is also X 4 times. On the other hand, if it is assumed that the luminous capacity of the luminescent particles has not reached the limit, the excitation light intensity becomes X times and the movement distance becomes X times, so that it becomes X 2 times. Therefore, when the diameter of the photodetection region is increased by X times, the decrease in the S / N ratio is expected to be 1 / X 2 times. However, when the light-emitting ability of the light-emitting particles reaches the limit, the amount of light emitted from the light-emitting particles, will be less than 2 times X, so that the S / N ratio is reduced more than expected. For example, if X = 1.2, the S / N ratio is about 0.7 times that before the enlargement of the light detection region if the emission intensity of the emission particles is not saturated, but the emission intensity of the emission particles. If there is saturation, the S / N ratio is further lowered.
そこで、本発明に於いては、既に述べた如く、励起光光路上のコリメーター4とダイクロイックミラー5との間にビーム整形素子100を配置し、図3(E)、3(F)に模式的に描かれている如く、光検出領域内の中央領域に於いて励起光強度分布が平坦化された領域FRが形成されるプロファイルを有するよう修正される。かかる構成によれば、図3(F)中にて示されている如く、励起光の強度分布Ex(一点鎖線)に於いて、白矢印にて示されている如く、略釣鐘状のプロファイルの中央領域の強度が、その周囲の領域へ分配され、(略釣鐘状のプロファイルの場合に比して)相対的に低減されることとなる。これにより、光検出領域内の周縁領域に於いては、発光粒子の光の検出に十分な励起光強度を与えると伴に、中央領域に於いては、励起光強度が不要に高くなることを回避することが可能となる。そうすると、ビーム整形素子を用いずに、光強度分布が略釣鐘状のプロファイルを有する同じ光量の励起光を入射させる場合と比較して、光検出領域内の中央領域の励起光強度が低減し、その周囲の領域の励起光強度が増大することとなるので、発光粒子が光検出領域内の中央領域する間に於いては発光粒子の発光に寄与しない励起光の光量が低減され、発光粒子が中央領域の外側から周縁領域を通過する間に於いては、発光粒子の光強度が増大される。換言すると、ビーム整形素子100によって光検出領域内の中央領域に於いて励起光強度分布が平坦化されたプロファイルを有するよう修正される場合には、ビーム整形素子100を利用しない場合に比して、入射された励起光が、より有効に発光粒子の発光に利用されることとなり、S/N比が改善されることとなる。なお、好適には、ビーム整形素子100によって光検出領域内の励起光強度分布のプロファイルを修正する場合、ノイズ光量を無駄に増やさないために、光検出領域内の分布のプロファイルが平坦化された領域に於ける励起光強度は、発光粒子の発光能が限界に達するレベル以下に調整される。励起光強度に対する発光粒子の発光強度は、実験的に予め計測可能であるので、発光粒子の発光能が限界に達するレベルの励起光強度も実験的に予め決定可能である。例えば、上記の如く、光検出領域の径をX倍にする場合、ビーム整形素子100による励起光強度分布の平坦化を行って発光粒子の発光強度の飽和がなくなれば、S/N比は、光検出領域の拡大前の約0.7倍程度まで回復することが期待される。
Therefore, in the present invention, as already described, the
3.ピンホールの開孔径の要件
上記の如く、光検出領域内の中央領域に於ける励起光強度分布を平坦化するビーム整形素子を用いる場合、対物レンズの焦点面(Z=0μm)に於いて、中央領域の励起光強度分布が平坦化されるよう調整されると、図4(A)左に描かれている略釣鐘状のプロファイルを有する場合と異なり、その焦点面から対物レンズの光軸方向(ビームの伝播方向。以下、単に「光軸方向」と称する。)に沿って離れた位置の励起光強度分布のプロファイルは、図4(A)右に描かれている如く、中央領域が平坦化された状態から変化することが分かっている。これは、ビーム整形素子に実現されるプロファイルが平坦化された強度分布は、一般に、ガウシアンビームを回折格子に透過させて、所定の面で干渉ムラが発生しないように光路長を調節することによって為されるためであり、所定の面から大きくずれると、干渉ムラが生ずるためである。例えば、或るビーム整形素子の場合、図示の如く、焦点面(Z=0μm)から光軸方向に±40μm離れると、励起光強度分布のプロファイルは、焦点面のプロファイルから大幅に変化する。即ち、上記の如きビーム整形素子を本発明の装置に於いて用いる場合、光検出領域の範囲内に、励起光強度分布の中央領域が平坦化された状態から変化した面が包含され、その面内に沿って発光粒子が通過した場合、その発光粒子の光強度の変化は、焦点面付近を通過した場合と大幅に異なることとなる。
3. As described above, when a beam shaping element that flattens the excitation light intensity distribution in the central region in the light detection region is used, in the focal plane (Z = 0 μm) of the objective lens, When the excitation light intensity distribution in the central region is adjusted so as to be flattened, unlike the case of having a substantially bell-shaped profile depicted on the left of FIG. 4A, from the focal plane to the optical axis direction of the objective lens. (The propagation direction of the beam. Hereinafter, the profile of the excitation light intensity distribution at a position along the optical axis direction is flat in the central region as depicted on the right side of FIG. 4A. It turns out that it changes from the state which was made into. This is because the intensity distribution obtained by flattening the profile realized in the beam shaping element is generally obtained by transmitting the Gaussian beam through the diffraction grating and adjusting the optical path length so that interference unevenness does not occur on a predetermined surface. This is because interference unevenness occurs when the position deviates greatly from a predetermined plane. For example, in the case of a certain beam shaping element, as shown in the drawing, the excitation light intensity distribution profile greatly changes from the focal plane profile when it is separated from the focal plane (Z = 0 μm) by ± 40 μm in the optical axis direction. That is, when the beam shaping element as described above is used in the apparatus of the present invention, a surface changed from a state in which the central region of the excitation light intensity distribution is flattened is included in the range of the light detection region. When the luminescent particles pass along the inside, the change in the light intensity of the luminescent particles is significantly different from the case of passing through the vicinity of the focal plane.
ところで、後に詳細に説明される如く、本実施形態の装置の場合、発光粒子の信号の検出は、時系列光強度データ上に於ける光強度の時間変化のプロファイルが、所定のプロファイルであるとき、より具体的には、発光粒子が光検出領域を通過した場合に想定されるプロファイルであるとき、その光強度の時間変化が発光粒子の信号として検出される。その場合、本実施形態に於いては、発光粒子が光検出領域を通過した場合に想定される光強度の時間変化のプロファイルとしては、典型的には、中央領域に於ける励起光強度分布が平坦化された焦点面付近を通過した発光粒子に於いて想定されるプロファイルが採用される。そうすると、励起光強度分布の中央領域が平坦化された状態から大幅に変化した面を通過した発光粒子の光強度の変化は、発光粒子の信号として検出されないが、その光強度は、ノイズ光として時系列光強度データ上に出現するので、結局、ノイズ光を増大させることとなり、S/N比を悪化させることとなる。従って、本実施形態の装置の場合、光検出領域の光軸方向の範囲は、励起光強度分布のプロファイルが実質的に平坦化された焦点面付近と略一致する領域に制限されることが好ましい。光検出領域の光軸方向の範囲は、その光軸方向と垂直な方向の範囲と伴に、ピンホールの開孔径によって決定されるので、ピンホールの開孔径に対しては、励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅に基づいて要件が設定される。 By the way, as will be described in detail later, in the case of the apparatus of the present embodiment, the detection of the signal of the luminescent particles is performed when the time-varying profile of the light intensity on the time-series light intensity data is a predetermined profile. More specifically, when the luminous particle has a profile assumed when it passes through the light detection region, a temporal change in the light intensity is detected as a signal of the luminous particle. In this case, in the present embodiment, the profile of the temporal change in the light intensity assumed when the luminescent particles pass through the light detection region is typically the excitation light intensity distribution in the central region. A profile assumed for the luminescent particles that have passed near the flattened focal plane is employed. Then, the change in the light intensity of the luminescent particles that has passed through the surface where the central region of the excitation light intensity distribution has changed significantly from the flattened state is not detected as a signal of the luminescent particles, but the light intensity is not detected as noise light. Since it appears on the time-series light intensity data, the noise light is eventually increased, and the S / N ratio is deteriorated. Therefore, in the case of the apparatus of the present embodiment, it is preferable that the range in the optical axis direction of the light detection region is limited to a region where the excitation light intensity distribution profile substantially coincides with the vicinity of the focal plane that is substantially flattened. . The range in the optical axis direction of the photodetection region is determined by the hole diameter of the pinhole along with the range in the direction perpendicular to the optical axis direction. The requirement is set based on the width in the optical axis direction of the objective lens in the region where the intensity distribution is substantially flattened.
上記のピンホールの開孔径の要件としては、具体的には、図4(B)を参照して、焦点面(Z=0)の近傍で、励起光強度分布が実質的に平坦化された範囲を±Zxμmとすると、光軸方向に沿って+Zxμmより上方と-Zxμmより下方との領域からの光のA%がピンホール13を通過できない条件が考えられる。そこで、まず、焦点面からZxμm光軸方向にずれた点Prの、対物レンズ8(焦点距離F1[mm])とコンデンサレンズ12(焦点距離F2[mm])によって形成される像Piの位置のピンホールからの距離Zi[mm]は、
Zi=Zx・(F2/F1)2(μm) …(1)
により与えられる。そして、対物レンズの瞳径がW[mm]のとき、コンデンサレンズ12を通った光のピンホール13上での面積(図4(C)の斜線領域)は、
π(W/2・Zi/(Zi+F2))2 …(2)
となるので、A%がピンホール13を通過できないときの開孔13aの直径Dは、
D=2[{(100-A)/100}2(W/2・Zi/(Zi+F2))] …(3)
となる。ここで、F1=4.5mm、F2=180mm、W=10mm、Zx=10μmとすると、Zi=16mmとなり、A%=90%とすると、Dは、260μmとなる。例えば、光検出領域の光軸方向と垂直な方向の直径を5μmにするとき、ピンホール開孔直径は、200μmとなるので、上記の例では、励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅に基づいて要件が満たされていることとなる。
As a requirement for the opening diameter of the pinhole, specifically, referring to FIG. 4B, the excitation light intensity distribution was substantially flattened in the vicinity of the focal plane (Z = 0). If the range is ± Zx μm, it can be considered that A% of the light from the region above + Zx μm and below −Zx μm cannot pass through the
Zi = Zx · (F2 / F1) 2 (μm) (1)
Given by. When the pupil diameter of the objective lens is W [mm], the area of light passing through the
π (W / 2 · Zi / (Zi + F2)) 2 (2)
Therefore, the diameter D of the
D = 2 [{(100-A) / 100} 2 (W / 2 · Zi / (Zi + F2))] (3)
It becomes. Here, if F1 = 4.5 mm, F2 = 180 mm, W = 10 mm, and Zx = 10 μm, then Zi = 16 mm, and if A% = 90%, D is 260 μm. For example, when the diameter of the light detection region in the direction perpendicular to the optical axis direction is set to 5 μm, the pinhole opening diameter is 200 μm. Therefore, in the above example, the light intensity distribution of the excitation light is substantially flattened. The requirement is satisfied on the basis of the width of the objective lens in the optical axis direction in the region thus formed.
ピンホール開孔直径の設定は、光検出領域の光軸方向と垂直な方向の直径によって決定される要件と励起光の光強度分布が実質的に平坦化された領域の対物レンズの光軸方向の幅に基づいて要件とのうち、いずれか小さい方の条件が満たされるように為されてよい。 The pinhole aperture diameter is set according to the requirements determined by the diameter in the direction perpendicular to the optical axis direction of the light detection region and the optical axis direction of the objective lens in the region where the light intensity distribution of the excitation light is substantially flattened It may be made so that the smaller one of the requirements is satisfied based on the width of.
処理操作過程
図1(A)に例示の本発明による光分析装置1を用いた光分析の処理操作の実施形態は、基本的には、特許文献9~12の記載又は本願出願人によるその他の走査分子係数法に係る特許出願に記載の処理が任意に用いられてよい。しかしながら、後に説明される如く、光強度の測定によって得られた時系列光強度データ上にて発光粒子の信号を検出する際に、略釣鐘状のプロファイルを有する関数ではなく、励起光強度分布のプロファイルに相似するプロファイルを有する関数を用いたフィッティングが実行される。具体的な処理操作としては、典型的には、(1)発光粒子を含む試料溶液の調製、(2)試料溶液の光強度の測定処理、及び、(3)測定された光強度の分析処理が実行される。図5は、フローチャートの形式にて表した本実施形態に於ける処理を示している。
Processing Operation Process The embodiment of the optical analysis processing operation using the
(1)試料溶液の調製
本発明の光分析技術の観測対象物となる粒子は、溶解された分子等の、試料溶液中にて分散し溶液中にてランダムに運動する粒子であれば、任意のものであってよく、例えば、タンパク質、ペプチド、核酸、脂質、糖鎖、アミノ酸若しくはこれらの凝集体などの生体分子、ウイルス、細胞、或いは、金属コロイド、その他の非生物学的分子などであってよい。観測対象物となる粒子が光を発する粒子でない場合には、発光標識(蛍光分子、りん光分子)が観測対象物となる粒子に任意の態様にて付加されたものが用いられる。試料溶液は、典型的には水溶液であるが、これに限定されず、有機溶媒その他の任意の液体であってよい。
(1) Preparation of sample solution The particles to be observed in the optical analysis technique of the present invention are arbitrary as long as they are dispersed particles in the sample solution and move randomly in the solution, such as dissolved molecules. For example, biomolecules such as proteins, peptides, nucleic acids, lipids, sugar chains, amino acids or aggregates thereof, viruses, cells, metal colloids, other non-biological molecules, etc. It's okay. When the particle to be observed is not a particle that emits light, a particle in which a luminescent label (fluorescent molecule, phosphorescent molecule) is added to the particle to be observed in an arbitrary manner is used. The sample solution is typically an aqueous solution, but is not limited thereto, and may be an organic solvent or any other liquid.
(2)試料溶液の光強度の測定(図5-ステップ100)
本実施形態の走査分子計数法による光分析に於ける光強度の測定は、測定中にミラー偏向器17及び/又はステージ位置変更装置17aを駆動して、試料溶液内での光検出領域の位置の移動(試料溶液内の走査)を行いながら実行される。操作処理に於いて、典型的には、マイクロプレート9のウェル10に試料溶液を注入して顕微鏡のステージ上に載置した後、使用者がコンピュータ18に対して、測定の開始の指示を入力すると、コンピュータ18は、記憶装置(図示せず)に記憶されたプログラム(試料溶液内に於いて光検出領域の位置を移動する手順と、光検出領域の位置の移動中に光検出領域からの光を検出して時系列の光強度データを生成する手順)に従って、試料溶液内の光検出領域に於ける励起光の照射及び光強度の計測が開始される。かかる計測中、コンピュータ18のプログラムに従った処理動作の制御下、ミラー偏向器17及び/又はステージ位置変更装置17aは、ミラー7(ガルバノミラー)及び/又は顕微鏡のステージ上のマイクロプレート9を駆動して、ウェル10内に於いて光検出領域の位置の移動を実行し、これと同時に光検出器16は、逐次的に検出された光を電気信号に変換してコンピュータ18へ送信し、コンピュータ18では、任意の態様にて、送信された信号から時系列の光強度データを生成して保存する。なお、典型的には、光検出器16は、一光子の到来を検出できる超高感度光検出器であるので、光の検出が、フォトンカウンティングによる場合、時系列光強度データは、時系列のフォトンカウントデータであってよい。
(2) Measurement of light intensity of sample solution (Figure 5-Step 100)
The light intensity in the optical analysis by the scanning molecule counting method of the present embodiment is measured by driving the
光強度の計測中の光検出領域の位置の移動速度は、任意に、例えば、実験的に又は分析の目的に適合するよう設定された所定の速度であってよい。検出された発光粒子の数に基づいて、その数密度又は濃度に関する情報を取得する場合には、光検出領域の通過した領域の大きさ又は体積が必要となるので、移動距離が把握される態様にて光検出領域の位置の移動が実行される。なお、計測中の経過時間と光検出領域の位置の移動距離とが比例関係にある方が測定結果の解釈が容易となるので、移動速度は、基本的に、一定速度であることが好ましいが、これに限定されない。 The moving speed of the position of the light detection region during the measurement of the light intensity may be a predetermined speed that is arbitrarily set, for example, experimentally or so as to suit the purpose of analysis. When acquiring information on the number density or concentration based on the number of detected luminescent particles, the size or volume of the region through which the light detection region has passed is required, so that the movement distance can be grasped. The movement of the position of the light detection region is executed at. In addition, since it is easier to interpret the measurement result when the elapsed time during measurement and the movement distance of the position of the light detection region are in a proportional relationship, it is preferable that the movement speed is basically a constant speed. However, the present invention is not limited to this.
光検出領域の位置の移動速度に関して、計測された時系列の光強度データからの発光粒子の個別の検出、或いは、発光粒子の数のカウンティングを、定量的に精度よく実行するためには、かかる移動速度は、発光粒子のランダムな運動、即ち、ブラウン運動による移動速度よりも速い値に設定されることが好ましい。本発明の光分析技術の観測対象粒子は、溶液中に分散又は溶解されて自由にランダムに運動する粒子であるので、ブラウン運動によって位置が時間と伴に移動する。従って、光検出領域の位置の移動速度が粒子のブラウン運動による移動に比して遅い場合には、図6(A)に模式的に描かれている如く、粒子が領域内をランダムに移動し、これにより、光強度がランダムに変化し(既に触れた如く、光検出領域の励起光強度は、領域の中心を頂点として外方に向かって低減する。)、個々の発光粒子に対応する有意な光強度の変化を特定することが困難となる。そこで、好適には、図6(B)に描かれている如く、粒子が光検出領域を略直線に横切り、これにより、時系列の光強度データに於いて、図6(C)の最上段に例示の如く、個々の発光粒子に対応する光強度の変化のプロファイルが略一様となり(発光粒子が略直線的に光検出領域を通過する場合には、光強度の変化のプロファイルは、励起光強度分布と略同様となる。)、個々の発光粒子と光強度との対応が容易に特定できるように、光検出領域の位置の移動速度は、粒子のブラウン運動による平均の移動速度(拡散移動速度)よりも速く設定される。 In order to quantitatively and accurately execute the individual detection of the luminescent particles from the measured time-series light intensity data or the counting of the number of luminescent particles with respect to the moving speed of the position of the light detection region, it is necessary. The movement speed is preferably set to a value faster than the random movement of the luminescent particles, that is, the movement speed due to the Brownian movement. Since the observation target particle of the optical analysis technique of the present invention is a particle that is dispersed or dissolved in a solution and moves freely and randomly, the position moves with time by Brownian motion. Accordingly, when the moving speed of the position of the light detection region is slower than the movement of the particle due to Brownian motion, the particle moves randomly within the region as schematically illustrated in FIG. As a result, the light intensity changes randomly (as already mentioned, the excitation light intensity of the light detection region decreases outward with the center of the region as the apex), and it corresponds to the individual luminescent particles. It is difficult to specify a change in light intensity. Therefore, preferably, as shown in FIG. 6 (B), the particles cross the light detection region in a substantially straight line, so that in the time-series light intensity data, the uppermost stage in FIG. 6 (C). As shown in the example, the light intensity change profile corresponding to each light emitting particle becomes substantially uniform (when the light emitting particle passes through the light detection region substantially linearly, the light intensity change profile is excited). It is almost the same as the light intensity distribution.), So that the correspondence between each light emitting particle and light intensity can be easily identified, the moving speed of the position of the light detection region is the average moving speed (diffusion due to the Brownian motion of the particle) It is set faster than (moving speed).
具体的には、拡散係数Dを有する発光粒子がブラウン運動によって半径Woの光検出領域(コンフォーカルボリューム)を通過するときに要する時間Δtは、平均二乗変位の関係式
(2Wo)2=6D・Δt …(4)
から、
Δt=(2Wo)2/6D …(5)
となるので、発光粒子がブラウン運動により移動する速度(拡散移動速度)Vdifは、概ね、
Vdif=2Wo/Δt=3D/Wo …(6)
となる。そこで、光検出領域の位置の移動速度は、かかるVdifを参照して、それよりも十分に早い値に設定されてよい。例えば、観測対象粒子の拡散係数が、D=2.0×10-10m2/s程度であると予想される場合には、Woが、0.62μm程度だとすると、Vdifは、1.0×10-3m/sとなるので、光検出領域の位置の移動速度は、その10倍以上の15mm/sなどと設定されてよい。なお、観測対象粒子の拡散係数が未知の場合には、光検出領域の位置の移動速度を種々設定して光強度の変化のプロファイルが、予想されるプロファイル(典型的には、励起光強度分布と略同様)となる条件を見つけるための予備実験を繰り返し実行して、好適な光検出領域の位置の移動速度が決定されてよい。
Specifically, the time Δt required for the luminescent particles having the diffusion coefficient D to pass through the light detection region (confocal volume) having the radius Wo by Brownian motion is expressed by a relational expression (2Wo) 2 = 6D · Δt (4)
From
Δt = ( 2 Wo) 2 / 6D (5)
Therefore, the speed (diffusion movement speed) Vdif at which the luminous particles move by Brownian motion is approximately
Vdif = 2Wo / Δt = 3D / Wo (6)
It becomes. Therefore, the moving speed of the position of the light detection region may be set to a value sufficiently faster than that with reference to the Vdif. For example, when the diffusion coefficient of the observation target particle is expected to be about D = 2.0 × 10 −10 m 2 / s, if Wo is about 0.62 μm, Vdif is 1.0 × Since 10 −3 m / s, the moving speed of the position of the light detection region may be set to 15 mm / s or more, which is 10 times or more. In addition, when the diffusion coefficient of the observation target particle is unknown, the profile of the change in the light intensity by setting the moving speed of the position of the light detection region in various ways is expected (typically, the excitation light intensity distribution). A preliminary experiment for finding a condition that is substantially the same as that described above may be repeatedly performed to determine a suitable moving speed of the position of the light detection region.
(3)光強度の分析処理
時系列光強度データの生成が為されると、時系列光強度データに於ける光強度値を用いて、下記の如く、発光粒子の信号の検出、発光粒子のカウンティング、濃度算出等の各種分析が実行される。
(i)発光粒子の信号の個別検出(図5-ステップ110~160)
既に触れた如く、一つの発光粒子の光検出領域を通過する際の軌跡が、図6(B)に示されている如く略直線状である場合、その粒子に対応する信号に於ける光強度データ上での光強度の変化は、光学系により決定される光検出領域内の励起光強度分布を反映した、中央領域が平坦化されたプロファイルを有する。かかるプロファイルは、高さA及び幅Tをパラメータとして持つ階段関数或いは下記のような正弦波の奇数項の展開式により表される。
f(t)=A{1+sin(t/T)+(1/3)sin(3t/T)+(1/5)sin(5t/T)+…} …(7)
従って、時系列光強度データ上に於いて、有意な光強度のプロファイル(バックグラウンドでないと明らかに判断できるプロファイル)に対して式(7)をフィッティングして算出された高さA及び幅Tが所定の範囲内にあるとき、その光強度のプロファイルが一つの粒子が光検出領域を通過したことに対応すると判定され、一つの発光粒子の検出が為されてよい。高さA及び幅Tが所定の範囲外にある信号は、ノイズ又は異物の信号として判定され、その後の分析等に於いて無視されてよい。
(3) Analysis process of light intensity When the time-series light intensity data is generated, the light intensity value in the time-series light intensity data is used to detect the light-emitting particle signal and Various analyzes such as counting and concentration calculation are executed.
(I) Individual detection of signal of luminescent particles (FIG. 5-steps 110 to 160)
As already mentioned, when the locus of one luminescent particle passing through the light detection region is substantially linear as shown in FIG. 6B, the light intensity in the signal corresponding to the particle. The change in the light intensity on the data has a profile in which the central area is flattened reflecting the excitation light intensity distribution in the light detection area determined by the optical system. Such a profile is represented by a step function having the height A and the width T as parameters, or an expansion formula of an odd term of a sine wave as described below.
f (t) = A {1 + sin (t / T) + (1/3) sin (3t / T) + (1/5) sin (5t / T) +…} (7)
Therefore, in the time-series light intensity data, the height A and the width T calculated by fitting the expression (7) to a significant light intensity profile (profile that can be clearly determined not to be background) are as follows. When the light intensity profile is within the predetermined range, it is determined that the light intensity profile corresponds to the passage of one particle through the light detection region, and one light emitting particle may be detected. A signal whose height A and width T are out of a predetermined range is determined as a noise or foreign matter signal, and may be ignored in subsequent analysis or the like.
光強度データ上の信号の検出の処理の一つの例に於いては、まず、光強度データ(図6(C)、最上段「検出結果(未処理)」)に対して、スムージング(平滑化)処理が為される(図5-ステップ110、図6(C)中上段「スムージング」)。発光粒子の発する光は確率的に放出されるものであり、微小な時間に於いてデータ値の欠落が生じ得るため、かかるスムージング処理によって、前記の如きデータ値の欠落を無視できることとなる。スムージング処理は、例えば、移動平均法により為されてよい。なお、スムージング処理を実行する際のパラメータ、例えば、移動平均法に於いて一度に平均するデータ点数や移動平均の回数など、は、光強度データ取得時の光検出領域の位置の移動速度(走査速度)、BIN TIMEに応じて適宜設定されてよい。 In one example of processing for detecting a signal on light intensity data, first, smoothing (smoothing) is performed on the light intensity data (FIG. 6C, “detection result (unprocessed)” at the top stage). ) Is performed (FIG. 5—Step 110, FIG. 6C, “Upper Smoothing”). The light emitted by the luminescent particles is probabilistically emitted, and data values may be lost in a very short time. Therefore, such a data value loss can be ignored by the smoothing process. The smoothing process may be performed by a moving average method, for example. It should be noted that the parameters for executing the smoothing process, such as the number of data points averaged at a time in the moving average method and the number of moving averages, are the moving speed (scanning of the position of the light detection region at the time of acquiring the light intensity data) Speed) and BIN TIME may be set as appropriate.
次いで、スムージング処理後の光強度データに於いて、有意なパルス状の信号(以下、「パルス信号」と称する。)が存在する時間領域(パルス存在領域)を検出するために、スムージング処理後の光強度データの時間についての一次微分値が演算される(ステップ120)。光強度データの時間微分値は、図6(C)中下段「時間微分」に例示されている如く、信号値の変化時点に於ける値の変化が大きくなるので、かかる時間微分値を参照することによって、有意な信号の始点と終点を有利に決定することができる。 Next, in the light intensity data after the smoothing process, in order to detect a time region (pulse existing region) where a significant pulse-like signal (hereinafter referred to as “pulse signal”) exists, A primary differential value with respect to time of the light intensity data is calculated (step 120). The time differential value of the light intensity data has a large change in the value at the time of change of the signal value as illustrated in the lower “time differential” in FIG. Thus, the significant signal start and end points can be advantageously determined.
しかる後、光強度データ上に於いて、逐次的に、有意なパルス信号が検出される(ステップ130~160)。具体的には、まず、光強度データの時間微分値データ上にて、逐次的に時間微分値を参照して、一つのパルス信号の始点と終点とが探索され決定され、パルス存在領域が特定される(ステップ130)。一つのパルス存在領域が特定されると、そのパルス存在領域に於けるスムージングされた光強度データに対して、励起光強度分布のプロファイルに相似な関数(「分布形状関数」)のフィッティングが行われ(図6(C)下段「分布形状関数フィッティング」)、分布形状関数の平坦な領域の高さの強度A、幅T、フィッティングに於ける(最小二乗法の)相関係数等のパラメータが算出される(ステップ140)。そして、算出された関数のパラメータが、一つの発光粒子が光検出領域を通過したときに検出されるパルス信号が描くプロファイルのパラメータについて想定される範囲内にあるか否か、即ち、分布形状関数の平坦な領域の高さの強度A、幅T、相関係数が、それぞれ、所定範囲内にあるか否か等が判定される(ステップ150)。かくして、算出された分布形状関数のパラメータが一つの発光粒子に対応する信号に於いて想定される範囲内にあると判定された信号は、一つの発光粒子に対応する信号であると判定され、これにより、一つの発光粒子が検出されたこととなる。一方、算出された分布形状関数のパラメータが想定される範囲内になかったパルス信号は、ノイズとして無視される。なお、発光粒子の信号の検出と同時に信号数のカウンティング、即ち、発光粒子のカウンティングが実行されてよい。 Thereafter, significant pulse signals are sequentially detected on the light intensity data (steps 130 to 160). Specifically, first, the start and end points of one pulse signal are searched and determined sequentially on the time differential value data of the light intensity data to identify the pulse existence region. (Step 130). Once a single pulse presence region is identified, a function similar to the profile of the excitation light intensity distribution (“distribution shape function”) is fitted to the smoothed light intensity data in that pulse presence region. (FIG. 6C, “Distribution shape function fitting” in the lower part), parameters such as the intensity A and width T of the flat area of the distribution shape function, and the correlation coefficient (of the least square method) in the fitting are calculated. (Step 140). Then, whether the calculated function parameter is within an assumed range for the profile parameter drawn by the pulse signal detected when one luminescent particle passes through the light detection region, that is, the distribution shape function It is determined whether the intensity A, the width T, and the correlation coefficient of the flat area are within predetermined ranges (step 150). Thus, the signal determined that the calculated parameter of the distribution shape function is within the range assumed in the signal corresponding to one luminescent particle is determined to be a signal corresponding to one luminescent particle, Thereby, one luminescent particle is detected. On the other hand, a pulse signal whose calculated distribution shape function parameter is not within the assumed range is ignored as noise. Note that the counting of the number of signals, that is, the counting of the luminescent particles may be performed simultaneously with the detection of the signal of the luminescent particles.
上記のステップ130~150の処理に於けるパルス信号の探索及び判定は、光強度データの全域に渡って繰り返し実行されてよい(ステップ160)。互いに異なる波長帯域の励起光を用いて光計測を行い、それぞれの波長帯域の励起光に対応して、複数の時系列光強度データが生成されている場合には、それぞれの時系列光強度データについて、ステップ130~150の処理が実行されてよい。なお、光強度データから発光粒子の信号を個別に検出する処理は、上記の手順に限らず、任意の手法により実行されてよい。 The search and determination of the pulse signal in the processing of the above steps 130 to 150 may be repeatedly executed over the entire area of the light intensity data (step 160). When optical measurement is performed using excitation light of different wavelength bands, and multiple time-series light intensity data are generated corresponding to the excitation light of each wavelength band, each time-series light intensity data The processing of steps 130 to 150 may be executed. In addition, the process which detects the signal of a luminescent particle separately from light intensity data is not restricted to said procedure, You may perform by arbitrary methods.
また、検出された発光粒子の信号の数を計数して、発光粒子の数の決定が為されている場合、更に、任意の手法にて、光検出領域の通過した領域の総体積が算定されれば、その体積値と発光粒子の数とから試料中の発光粒子の濃度が決定可能となる。光検出領域の通過した領域の総体積は、例えば、特許文献9~12に記載されている要領にて決定されてよい。
In addition, when the number of detected luminescent particles is counted and the number of luminescent particles is determined, the total volume of the region through which the photodetection region passes is further calculated by an arbitrary method. Then, the concentration of the luminescent particles in the sample can be determined from the volume value and the number of the luminescent particles. The total volume of the region through which the light detection region has passed may be determined, for example, in the manner described in
かくして、上記の本実施形態の構成によれば、光検出領域内の光強度分布のプロファイルが、その中心から光軸に対して放射方向の或る距離に亘って励起光強度が略一定となるように修正される。そして、励起光強度分布が略釣鐘状のプロファイルとなっていた場合に光検出領域の中央領域を過剰な光強度にて通っていた励起光の光量が、中央領域の外側の領域へ振り分けられることとなるので、光検出領域の拡大に際して中央領域の外側の領域の発光粒子の発光強度を高くすることが可能となる。従って、励起光強度分布が略釣鐘状のプロファイルとなっていた場合に比して、光検出領域の周縁領域の発光粒子の発光強度が増大されるので、光検出領域の拡大に伴う励起光の総光量の増大量を低減できることも期待される。 Thus, according to the configuration of the present embodiment described above, the light intensity distribution profile in the light detection region has a substantially constant excitation light intensity over a certain distance in the radial direction from the center to the optical axis. To be corrected. When the excitation light intensity distribution has a substantially bell-shaped profile, the amount of excitation light that has passed through the central area of the light detection area with excessive light intensity is distributed to the area outside the central area. Therefore, it is possible to increase the emission intensity of the luminescent particles in the region outside the central region when the photodetection region is enlarged. Therefore, compared with the case where the excitation light intensity distribution has a substantially bell-shaped profile, the emission intensity of the luminescent particles in the peripheral region of the light detection region is increased. It is also expected that the increase in total light quantity can be reduced.
Claims (4)
前記試料溶液内に於いて前記光学系の光検出領域の位置を相対的に移動する光検出領域移動部と、
前記光検出領域へ励起光を照射する光照射部と、
前記光検出領域からの光を検出する光検出部と、
前記試料溶液内に於いて前記光検出領域の位置を移動させながら前記光検出部にて検出された前記光検出領域からの光の時系列の光強度データを生成し、前記時系列の光強度データに於いて前記発光粒子の信号の各々を個別に検出する信号処理部とを含み、
前記光照射部に於ける前記励起光の光路に於いて、前記光検出領域内の中心を含む少なくとも一部の領域内の前記励起光の光強度分布を実質的に平坦化するビーム整形素子が設けられている装置。 An optical analyzer that detects light from luminescent particles that are dispersed in a sample solution and move randomly using an optical system of a confocal microscope or a multiphoton microscope,
A light detection region moving unit that relatively moves the position of the light detection region of the optical system in the sample solution;
A light irradiation unit for irradiating the light detection region with excitation light;
A light detection unit for detecting light from the light detection region;
Generate time-series light intensity data of light from the light detection area detected by the light detection unit while moving the position of the light detection area in the sample solution, and the time-series light intensity A signal processor for individually detecting each of the signals of the luminescent particles in the data,
A beam shaping element for substantially flattening a light intensity distribution of the excitation light in at least a part of a region including a center in the light detection region in an optical path of the excitation light in the light irradiation unit; Equipment provided.
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Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JPH0359403A (en) * | 1989-07-27 | 1991-03-14 | Kubota Corp | interferometer |
| JP2003185568A (en) * | 2001-12-17 | 2003-07-03 | Fuji Photo Film Co Ltd | Sensor using attenuated total reflection |
| WO2011108370A1 (en) * | 2010-03-01 | 2011-09-09 | オリンパス株式会社 | Optical analysis device, optical analysis method, and computer program for optical analysis |
| JP2012042513A (en) * | 2010-08-12 | 2012-03-01 | Nikon Corp | Beam shaping optical system and scanning microscope |
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2015
- 2015-02-05 WO PCT/JP2015/053206 patent/WO2016125278A1/en not_active Ceased
Patent Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JPH0359403A (en) * | 1989-07-27 | 1991-03-14 | Kubota Corp | interferometer |
| JP2003185568A (en) * | 2001-12-17 | 2003-07-03 | Fuji Photo Film Co Ltd | Sensor using attenuated total reflection |
| WO2011108370A1 (en) * | 2010-03-01 | 2011-09-09 | オリンパス株式会社 | Optical analysis device, optical analysis method, and computer program for optical analysis |
| JP2012042513A (en) * | 2010-08-12 | 2012-03-01 | Nikon Corp | Beam shaping optical system and scanning microscope |
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