WO2012063338A1 - Protein having chitinase activity and uses thereof - Google Patents
Protein having chitinase activity and uses thereof Download PDFInfo
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- WO2012063338A1 WO2012063338A1 PCT/JP2010/070041 JP2010070041W WO2012063338A1 WO 2012063338 A1 WO2012063338 A1 WO 2012063338A1 JP 2010070041 W JP2010070041 W JP 2010070041W WO 2012063338 A1 WO2012063338 A1 WO 2012063338A1
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- protein
- present
- polynucleotide
- amino acid
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N37/00—Biocides, pest repellants or attractants, or plant growth regulators containing organic compounds containing a carbon atom having three bonds to hetero atoms with at the most two bonds to halogen, e.g. carboxylic acids
- A01N37/44—Biocides, pest repellants or attractants, or plant growth regulators containing organic compounds containing a carbon atom having three bonds to hetero atoms with at the most two bonds to halogen, e.g. carboxylic acids containing at least one carboxylic group or a thio analogue, or a derivative thereof, and a nitrogen atom attached to the same carbon skeleton by a single or double bond, this nitrogen atom not being a member of a derivative or of a thio analogue of a carboxylic group, e.g. amino-carboxylic acids
- A01N37/46—N-acyl derivatives
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N65/00—Biocides, pest repellants or attractants, or plant growth regulators containing material from algae, lichens, bryophyta, multi-cellular fungi or plants, or extracts thereof
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N65/00—Biocides, pest repellants or attractants, or plant growth regulators containing material from algae, lichens, bryophyta, multi-cellular fungi or plants, or extracts thereof
- A01N65/08—Magnoliopsida [dicotyledons]
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
- C12N15/8279—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance
- C12N15/8286—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance for insect resistance
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/24—Hydrolases (3) acting on glycosyl compounds (3.2)
- C12N9/2402—Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
- C12N9/2405—Glucanases
- C12N9/2434—Glucanases acting on beta-1,4-glucosidic bonds
- C12N9/2442—Chitinase (3.2.1.14)
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y302/00—Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
- C12Y302/01—Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
- C12Y302/01014—Chitinase (3.2.1.14)
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A40/00—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production
- Y02A40/10—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production in agriculture
- Y02A40/146—Genetically Modified [GMO] plants, e.g. transgenic plants
Definitions
- the present invention relates to a protein having chitinase activity and use thereof.
- GM plant Genetically modified plant
- Bt toxin produced by a Gram-positive bacterium Bacillus thuringiensis
- Such Bt toxins are known to exhibit insect-resistant activity including insecticidal properties at low concentrations (about 1 ppm) (see, for example, Non-Patent Document 1).
- insect-resistant proteins other than Bt toxins is desired.
- milky lotion is a milky white liquid that leaks when a plant is damaged, and is accumulated in the milk duct cells of the plant. It is believed that 20,000 species of 40 families have latex.
- Non-Patent Document 2 describes three types of sugar-like alkaloids (1,4-dideoxy-1,4-imino-D-arabinitol (D-AB1)), 1- deoxynojirimycin (DNJ) and 1,4-dideoxy-1,4-imino-D-ribitol function as inhibitors of glycolytic and sugar-metabolizing enzymes, and as a result, erisan (a predatory lepidopterous insect of the scorpionidae) ) Larvae are shown to exhibit growth inhibitory activity.
- D-AB1 sugar-like alkaloids
- DNJ 1- deoxynojirimycin
- Larvae a predatory lepidopterous insect of the scorpionidae
- Patent Document 1 discloses that fraction 1 obtained by native PAGE from the emulsion of mulberry (variety: Shinichinoset) exhibits growth inhibitory activity against erysan hatched larvae, At least 56 kDa, 46 KDa, 30 KDa and 18 KDa are disclosed.
- Non-Patent Document 3 further obtained by further purifying the protein contained in Fraction 1 that was shown to exhibit growth inhibitory activity against Erysan hatching larvae in Patent Document 1, using a DEAE Sepharose column. It is disclosed that one of the obtained proteins is named MLX56.
- Japanese Patent Publication Japanese Patent Laid-Open No. 2008-245640 (Released Oct. 16, 2008)”
- Non-Patent Document 2 Fraction 1 disclosed in Patent Document 1 and MLX56 disclosed in Non-Patent Document 3 have insecticidal activity, although they have growth inhibitory activity against insects. Does not have. For this reason, insect-resistant activity is insufficient.
- sugar-like alkaloids are not proteins, they cannot be used for production of GM plants. Therefore, insect-resistant proteins having sufficient insect-resistant activity including insecticidal properties are desired.
- Non-Patent Document 3 discloses that one of the obtained proteins is named MLX56. Looking at 2b lane 2, the protein obtained by purification on the DEAE Sepharose column is not a protein with a molecular weight of 56 kDa, but a protein with a molecular weight of 45 kDa, and there is another band with a slightly higher mobility. It is mixed. For this reason, Non-Patent Document 3 cannot prove that MLX56 has a growth inhibitory activity.
- the present invention has been made in view of the above problems, and an object of the present invention is to provide a protein having sufficient insect-resistant activity including insecticidal properties and use thereof.
- the present inventor isolated two kinds of novel proteins (LA-a protein and LA-b protein) from the soluble fraction of mulberry (Morisakari varieties) milk and performed functional analysis. As a result, it was found that these proteins have chitinase activity. Furthermore, surprisingly, when these proteins are fed to larvae as a feed, it has been found for the first time that they show remarkable insecticidal properties compared to the case where no protein is given, and the present invention is completed based on such new findings. It came to.
- mulberry milk contains a protein having chitinase activity and insecticidal properties. Therefore, the present inventor found for the first time that the protein having chitinase activity and insecticidal properties is present in the mulberry emulsion, and is disclosed herein.
- the protein according to the present invention is characterized by any of the following (a) to (d): (A) a protein comprising the amino acid sequence shown in SEQ ID NO: 1; (B) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 1 and having chitinase activity; (C) a protein consisting of the amino acid sequence shown in SEQ ID NO: 2; (D) A protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 2 and having chitinase activity.
- the protein according to the present invention is a protein having chitinase activity and has sufficient insect resistance activity including insecticidal properties. That is, the protein according to the present invention is superior to conventional proteins in killing insects, weakening insects, or inhibiting insect growth. For this reason, the protein which concerns on this invention can be utilized suitably as an insecticide, an insecticide, an insect-proof bait, etc.
- polynucleotide according to the present invention encodes the protein according to the present invention
- a vector for expressing the protein according to the present invention can be prepared by using such a polynucleotide.
- the vector according to the present invention is configured to contain the polynucleotide according to the present invention
- a vector can be used in a host cell (eg, yeast, Escherichia coli, insect cell, plant cell, mammalian cell, etc.). By introducing, a transformant expressing the protein according to the present invention can be obtained.
- the transformant according to the present invention expresses the protein according to the present invention as described above, it can be used to prepare the protein. Further, when such a transformant is a transformed plant, the transformed plant has insect resistance activity by expressing the protein according to the present invention. On the other hand, the work of spraying pesticides such as insecticides can be omitted.
- insecticide according to the present invention has the protein according to the present invention, it is excellent in insect resistance activity.
- the protein according to the present invention is a protein characterized by any of the following (a) to (d): (A) a protein comprising the amino acid sequence shown in SEQ ID NO: 1; (B) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 1 and having chitinase activity; (C) a protein consisting of the amino acid sequence shown in SEQ ID NO: 2; (D) A protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 2 and having chitinase activity.
- the protein consisting of the amino acid sequence shown in SEQ ID NO: 1 corresponds to the “LA-a2 protein” shown in the examples described later, and the protein consisting of the amino acid sequence shown in SEQ ID NO: 2 is referred to as “LA in the examples described later”.
- -B protein ".
- the above “one or several amino acids are deleted, substituted and / or added” means that the amino acid sequence of the protein before one or several amino acids are deleted, substituted and / or added. 1 or a number such that it has an identity of at least greater than 83%, preferably greater than at least 92%, more preferably greater than at least 95%, most preferably greater than at least 97%. Means that one amino acid has been deleted, substituted and / or added.
- the site where one or several amino acids are deleted, substituted and / or added is defined in the amino acid sequence if the protein after the deletion, substitution and / or addition of amino acids has chitinase activity. Any site may be used.
- amino acid sequences can be determined using analysis software Genetyx manufactured by Genetics Co., Ltd.
- analysis software Genetyx manufactured by Genetics Co., Ltd.
- Such software is software that uses the program “FASTA” according to the Lipman-Pearson method (Lipman DJ, Pearson WR. Rapid, and sensitive sensitive protein, similarity, searches, Science, 1985, Mar 22, 227 (4693): 1435-41.).
- Such a mutant protein is not limited to a protein having a mutation artificially introduced by a known mutant polypeptide production method, and may be a protein obtained by isolating and purifying a naturally occurring protein. It is well known in the art that some amino acids in the amino acid sequence of a protein can be easily modified without significantly affecting the structure or function of the protein. Furthermore, it is also well known that there are variants that not only artificially modify, but also do not significantly alter the structure or function of the protein in the native protein.
- Preferred variants have conservative or non-conservative substitutions, deletions and / or additions.
- Preferred mutations are silent substitutions, deletions and additions, and particularly preferred are conservative substitutions. These mutations do not change the chitinase activity of the protein according to the invention.
- conservative substitutions are substitutions of one amino acid for another in the aliphatic amino acids Ala, Val, Leu, and Ile, exchange of hydroxyl residues Ser and Thr, acidic residues Asp and Glu exchange, substitution between amide residues Asn and Gln, exchange of basic residues Lys and Arg, and substitution between aromatic residues Phe, Tyr.
- the above protein (b) includes “LA-a1 protein” (SEQ ID NO: 3) shown in the Examples described later.
- the “LA-a1 protein” has 10 amino acid residues substituted, 2 amino acid residues added (inserted), and 9 amino acid residues deleted in the amino acid sequence shown in SEQ ID NO: 1. Protein.
- the amino acid sequence identity between “LA-a2 protein” and “LA-a1 protein” is 94%.
- the protein according to the present invention has, for example, an intermolecular and / or intramolecular crosslink (for example, disulfide bond), chemical modification (for example, sugar chain, phosphate, or other functional group).
- an intermolecular and / or intramolecular crosslink for example, disulfide bond
- chemical modification for example, sugar chain, phosphate, or other functional group.
- the present invention is not particularly limited to these, and those to which a label (for example, a histidine tag or the like) or a fusion protein (for example, streptavidin, cytochrome, GFP, or the like) has been added.
- the protein according to the present invention exhibits chitinase activity.
- the background chitinase activity measured under the same measurement conditions except that the measurement target protein does not contain the measurement target protein, as measured by a conventionally known chitinase activity measurement method. If it is significantly higher than, the protein to be measured can be said to have “chitinase activity”.
- the risk rate is less than 5%, preferably dangerous. It is intended that there is a significant difference at a rate of less than 1%, more preferably at a risk rate of less than 0.5%.
- the protein to be measured when statistical analysis is performed using the tukey test, between the chitinase activity of the protein to be measured and the background chitinase activity measured under the same measurement conditions except that the reaction solution does not contain the protein to be measured.
- the risk rate is less than 5%, preferably less than 1%, more preferably less than 0.5%, the protein to be measured can be said to have “chitinase activity”.
- the chitinase activity of the protein (a) is 100%
- the chitinase activity of the protein (b) under the same measurement conditions as the protein (a) is 10% or more, preferably 15 % Or more, more preferably 25% or more.
- the protein (c) has a chitinase activity of 100%
- the protein (d) has a chitinase activity of 10% or more, preferably 15%, under the same measurement conditions as the protein (c). More preferably, it may be 25% or more.
- Examples of the “chitinase activity measuring method” include the methods described in the “chitinase activity measuring method” section of Examples described later, but the present invention is not limited thereto.
- the protein according to the present invention has insect resistance activity.
- insect resistance activity refers to an activity that kills insects (hereinafter referred to as “insecticidal”), an activity that weakens insects, or an activity that inhibits insect growth (hereinafter referred to as “growth inhibitory activity”).
- growth inhibitory activity an activity that inhibits insect growth
- a bait containing a protein according to the present invention is given to an insect larvae, and the insect that ingests the bait is significantly killed or weakened compared to the control, or If the growth of the insect that ingested the food is significantly inhibited (delayed) as compared with the control, it can be determined that the protein according to the present invention has insect-resistant activity.
- the “control” means an insect (or a group of insects) fed with the same conditions except that the protein according to the present invention is not contained in the food.
- the contact with the protein according to the present invention or ingestion of the protein according to the present invention results in hydrolysis of the chitin on the body of the insect or digestive sputum, resulting in resistance to resistance. It is thought to show worm activity.
- insect-resistant activity As an insect in which the protein according to the present invention exhibits insect-resistant activity, it is killed, weakened, or inhibited by growth (delay) by contacting the protein according to the present invention or ingesting the protein according to the present invention. If it is a bug to be done, it will not be specifically limited. Examples of such insects include arthropods such as Coleoptera, Lepidoptera, Diptera, Hymenoptera, Hemiptera, Diptera, Lepidoptera, etc., ticks, etc. .
- the protein according to the present invention has insect-resistant activity including insecticidal properties, it can be suitably used as an insecticide, insecticide, insect-resistant bait, and the like.
- insect-resistant bait means a bait that exhibits insect-resistant activity when ingested by insects. That is, since the insect that ingested the insect-resistant bait containing the protein according to the present invention is inhibited (delayed) or killed or weakened, the insect can be easily exterminated.
- the protein according to the present invention may further have chitosanase activity.
- the background chitosanase activity measured under the same measurement conditions except that the measurement target protein does not contain the measurement target protein, as measured by a conventionally known chitosanase activity measurement method. If it is significantly higher than the above, the protein to be measured can be said to have “chitosanase activity”.
- the chitosanase activity of the protein of (a) is 100%
- the chitosanase activity of the protein of (b) under the same measurement conditions as the protein of (a) is 10% or more, preferably 15 % Or more, more preferably 25% or more.
- the chitosanase activity of the protein (c) is 100%
- the chitosanase activity of the protein (d) under the same measurement conditions as the protein (c) is 10% or more, preferably 15% More preferably, it may be 25% or more.
- chitosanase activity measuring method examples include the method described in the section “Method for measuring chitosanase activity” in Examples described later, but the present invention is not limited thereto.
- the protein according to the present invention may be chemically synthesized using an amino acid synthesizer or the like, may be produced using a gene recombination technique, or is a product obtained by isolating and purifying a naturally occurring protein. May be.
- the protein when a protein is chemically synthesized using an amino acid synthesizer or the like, the protein can be chemically synthesized by a conventionally known peptide synthesis method (for example, solid phase synthesis method, liquid phase synthesis method).
- a conventionally known peptide synthesis method for example, solid phase synthesis method, liquid phase synthesis method.
- the recombinant protein expression system is not particularly limited as long as the protein according to the present invention can be expressed.
- conventionally known E. coli expression systems, insect cell expression systems, plant cell expression systems, mammalian cell expression systems, cell-free expression systems, and the like can be suitably used.
- the purification method is not particularly limited.
- it can be purified from a soluble fraction of plant emulsion.
- the soluble fraction of plant emulsion can be obtained, for example, by centrifuging the emulsion collected from the plant and collecting the supernatant.
- means for purifying the protein according to the present invention from the obtained soluble fraction include ion exchange chromatography, hydrophobic chromatography, gel filtration chromatography and the like. These purification means may be performed alone or in combination. When combining a plurality, the combination order is not particularly limited.
- the protein according to the present invention can be isolated and purified from plant milk by a method including at least a step of subjecting a soluble fraction of plant milk to hydrophobic chromatography.
- the proteins (a) to (d) can be purified with high purity.
- the conditions for hydrophobic chromatography can be appropriately set by those skilled in the art according to the type of column used, the type of mobile phase, the flow rate, the amount of sample applied, and the like. For example, as shown in the examples described later, using a HiLoad 16/10 phenyl sepharose HP column (16 mm id ⁇ 100 mm; GE healthcare, Piscataway, NJ, USA), 30% saturated ammonium sulfate to 0% saturated ammonium sulfate The protein may be eluted at a flow rate of 2 ml / min with a linear concentration gradient.
- the purification method preferably further includes a step of subjecting the sample after the step of subjecting the soluble fraction of the plant emulsion to hydrophobic chromatography, and subjecting the sample to cation exchange chromatography. If it is the said structure, especially the protein of said (e) or (f) can be refine
- a flow rate is measured by using a linear concentration gradient of 0 to 0.5 M NaCl in a buffer (10 mM calcium phosphate, 1 mM EDTA, pH 6.0) using a UNOS1 cation exchange column (Bio-Rad). It may be eluted at 3.0 ml / min.
- the protein according to the present invention is preferably a protein derived from a plant latex. If it is derived from a plant emulsion, a protein having a plant-derived sugar chain added thereto can be obtained.
- the “plant” is not particularly limited as long as it is a plant having an emulsion. Specific examples of such plants include, for example, moraceae plants, asteraceae plants, asteraceae plants, convolvulaceae plants, euphorbiaceae plants, potato family plants, oleander plant plants, cinnamon family plants, poppy family plants, Examples include urushiaceae plants, hypericaceae plants, legumes, cactaceae plants, and liliaceae plants. Among these plants, it is particularly preferable that the plant is a mulberry plant.
- the polynucleotide according to the present invention is a polynucleotide encoding the protein according to the present invention.
- the polynucleotide may exist in the form of DNA (for example, cDNA or genomic DNA) or RNA (for example, mRNA).
- DNA or RNA may be double-stranded or single-stranded.
- Single-stranded DNA or RNA may be a coding strand (sense strand) or a non-coding strand (antisense strand).
- polynucleotide according to the present invention may be chemically synthesized, and the codon usage may be changed so that expression of the encoded protein is improved.
- a method for modifying a polynucleotide according to the present invention a commonly used method for modifying a polynucleotide is used. That is, a polynucleotide having genetic information of a recombinant protein may be prepared by substituting, deleting, and / or adding a specific base of a polynucleotide having protein genetic information.
- a specific method for converting the base of the polynucleotide for example, use of a polymerase chain reaction method (PCR method) can be mentioned. These methods are known to those skilled in the art.
- the nucleotide sequence of the polynucleotide according to the present invention is not particularly limited as long as it encodes the protein according to the present invention. Therefore, the present invention includes all polynucleotides having a base sequence corresponding to the amino acid sequence of the protein according to the present invention.
- polynucleotide may be any of the following polynucleotides (I) to (IV): (I) a polynucleotide having the base sequence represented by SEQ ID NO: 4; (II) a polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 4 under stringent conditions and encodes a protein having chitinase activity; (III) a polynucleotide having the base sequence represented by SEQ ID NO: 5; (IV) A polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 5 under stringent conditions and encodes a protein having chitinase activity.
- the polynucleotide having the base sequence shown in SEQ ID NO: 4 is a polynucleotide encoding the protein having the amino acid sequence shown in SEQ ID NO: 1, ie, “LA-a2 protein” shown in the Examples described later.
- the polynucleotide having the base sequence shown in 5 is a polynucleotide encoding the protein having the amino acid sequence shown in SEQ ID NO: 2, that is, the “LA-b protein” shown in the Examples described later.
- the polynucleotide according to the present invention may be substituted with a chemically synthesized base.
- part by which the polynucleotide based on this invention is substituted is not specifically limited,
- such a polynucleotide includes a polynucleotide (SEQ ID NO: 6) encoding “LA-a1 protein” shown in Examples described later.
- the polynucleotide according to the present invention includes a polynucleotide encoding the protein according to the present invention (for example, a polynucleotide having the base sequence shown in SEQ ID NO: 4 or 5), or a polynucleotide comprising a base sequence complementary thereto.
- a polynucleotide that hybridizes with a nucleotide under stringent conditions and encodes a protein having chitinase activity is also included.
- stringent conditions means that only when at least 90% identity, preferably at least 95% identity, most preferably at least 97% identity exists between sequences. It means that hybridization occurs. Specifically, for example, hybridization solution (50% formamide, 5 ⁇ SSC (150 mM NaCl, 15 mM trisodium citrate), 50 mM sodium phosphate (pH 7.6), 5 ⁇ Denhart solution, 10% sulfuric acid The conditions include washing the filter in 0.1 ⁇ SSC at about 65 ° C. after overnight incubation in dextran and 20 ⁇ g / ml denatured sheared salmon sperm DNA).
- Hybridization can be performed by a known method such as Sambrook et al. (Molecular Cloning, A Laboratory Manual, 3rd Ed, Cold Spring Harbor Laboratory (2001)). Usually, the higher the temperature and the lower the salt concentration, the higher the stringency (harder to hybridize), and a polynucleotide with higher homology can be obtained.
- the identity of the base sequence can be determined using analysis software Genetyx manufactured by Genetics Co., Ltd.
- the nucleotide sequence of the polynucleotide according to the present invention can be determined by a conventionally known method.
- the polynucleotide according to the present invention may be composed only of the polynucleotide encoding the protein according to the present invention, but other base sequences may be added thereto.
- the base sequence to be added is not limited, but includes a label (for example, histidine tag, Myc tag, and FLAG tag), a fusion protein (for example, GST and MBP), a promoter sequence (for example, yeast-derived promoter sequence, phage) Derived promoter sequences, E. coli-derived promoter sequences, etc.), and base sequences encoding signal sequences (eg, endoplasmic reticulum translocation signal sequences, secretory sequences, etc.).
- the site to which these base sequences are added is not particularly limited, and may be the N-terminus or the C-terminus of the translated protein.
- the vector according to the present invention includes the polynucleotide according to the present invention. Since the “polynucleotide according to the present invention” is as described in the above-mentioned section “2. Polynucleotide according to the present invention”, the description thereof is omitted here.
- the vector according to the present invention includes the polynucleotide according to the present invention
- other configurations are not particularly limited.
- Various conventionally known vectors can be used as a base vector constituting the vector according to the present invention.
- a plasmid, phage, cosmid or the like can be used, and a suitable vector can be appropriately selected depending on the host cell into which the vector is introduced and the introduction method.
- plasmid vector for example, pBR322, pBR325, pUC19, pUC119, pBluescript, pBluescriptSK, pBI vectors, and the like can be used.
- the fragment of the polynucleotide cleaved using a restriction enzyme treatment or the like and the base vector are cleaved with a restriction enzyme. It can be constructed by binding and closing the linear polynucleotide obtained above. When closing the binding, DNA ligase or the like can be used depending on the nature of the vector and the polynucleotide.
- the vector according to the present invention After the vector according to the present invention is introduced into a host cell, a transformant containing the polynucleotide according to the present invention can be obtained by screening using the expression of the marker gene of the vector as an index. Therefore, the vector according to the present invention preferably contains a marker gene such as a drug resistance gene. Specific examples of such drug resistance genes include drug resistance genes for hygromycin, bleomycin, kanamycin, gentamicin, chloramphenicol and the like. Thereby, transformed host cells can be easily selected by selecting cells that grow in a medium containing the antibiotic.
- the vector according to the present invention may further have a promoter for expressing the polynucleotide according to the present invention in a host cell.
- the promoter is not particularly limited as long as it is a promoter capable of expressing the polynucleotide according to the present invention in a host cell, and a known promoter can be preferably used.
- the promoter is not particularly limited as long as the promoter is linked so as to express the polynucleotide of the present invention and introduced into the vector.
- the vector according to the present invention may further contain other DNA segments in addition to the promoter, the marker gene, and the polynucleotide described above.
- the other DNA segment is not particularly limited, and examples thereof include a terminator, an enhancer, and a base sequence for improving translation efficiency.
- the vector amplification method (production method) according to the present invention is not particularly limited, and a conventionally known method can be used.
- a vector can be amplified in E. coli using E. coli as a host cell.
- a preferred E. coli type can be selected according to the type of vector.
- the present invention includes a transformant transformed with the vector according to the present invention.
- the host cell transformed with the vector according to the present invention is not particularly limited.
- yeast, Escherichia coli, insect cells, plant cells, mammalian cells and the like can be used.
- the method for introducing the vector according to the present invention into the host cell is not particularly limited.
- the host cell is a microorganism belonging to the genus Escherichia
- the recombinant DNA is introduced in the presence of calcium ions.
- a conventionally known method such as a method of using an electroporation method or the like can be applied.
- the host cell is a plant cell
- conventionally known methods such as the Agrobacterium method, the particle gun method, the polyethylene glycol method, and the electroporation method can be applied.
- the vector according to the present invention has been introduced into the host cell can be confirmed by a conventionally known PCR method, Southern hybridization method, Northern hybridization method or the like. It can also be confirmed by measuring the expression of the protein encoded by the polynucleotide contained in the vector according to the present invention by a conventionally known immunological technique. It can also be confirmed by measuring the enzyme activity (for example, chitinase activity, chitosanase activity) exhibited by the protein encoded by the polynucleotide by a conventionally known biochemical technique.
- a drug resistance marker gene such as kanamycin resistance or hygromycin resistance is introduced into the vector according to the present invention, a transformed host is selected by selecting cells that grow in a medium containing the antibiotic. Cells can be easily sorted.
- the transformant thus obtained expresses the protein according to the present invention, it can be used to prepare the protein.
- the transformant of the present invention includes a transformed plant regenerated from the transformed cell.
- Regeneration of plant bodies from transformed cells can be performed by methods known to those skilled in the art depending on the type of plant cells. Since the obtained transformed plant body expresses the protein according to the present invention, it can be a plant body to which insecticidal activity is imparted. Therefore, it is possible to omit the work of spraying agricultural chemicals such as insecticides on such transformed plants.
- offspring can be obtained from the transformed plant by sexual reproduction or asexual reproduction. It is also possible to obtain propagation materials (for example, seeds, protoplasts, etc.) from the transformed plant body, its progeny or clones, and mass-produce the desired transformed plant body based on them.
- propagation materials for example, seeds, protoplasts, etc.
- the plant used for transformation is not particularly limited, and for example, various monocotyledonous plants, dicotyledonous plants and the like can be used.
- examples of monocotyledonous plants include gramineous plants and liliaceous plants.
- examples of the dicotyledonous plants include mulberry plants, cruciferous plants, legumes, eggplants, cucurbits, convolvulaceae, roses, mallows.
- insecticide according to the present invention only needs to contain the protein according to the present invention as an active ingredient.
- the “protein according to the present invention” is as described in the section “1. Protein according to the present invention”, and therefore, the description thereof is omitted here. Since the protein according to the present invention has excellent insecticidal properties, an insecticide containing such a protein as an active ingredient can be an insecticide having excellent insecticidal properties.
- insect-proofing agent intends a composition for killing insects, weakening insects, or inhibiting insect growth.
- the above-mentioned “killing insects, weakening insects, or inhibiting insect growth” may be expressed as “extermination of insects”.
- the “insect” is as described in the section “1. Protein according to the present invention”, and the description thereof is omitted here.
- the insecticide according to the present invention contains the protein according to the present invention as an active ingredient, the content thereof is not particularly limited, and the content of the protein according to the present invention differs depending on the target insect,
- the content of the protein according to the present invention may be 0.01% by weight or more, preferably 0.05% by weight or more, with respect to the total weight of the insect repellent according to the present invention.
- the content is more preferably 0.1% by weight or more, further preferably 0.2% by weight or more, and most preferably 0.5% by weight or more.
- sufficient insect resistance activity is exhibited even in a small amount.
- insecticide according to the present invention may appropriately contain components other than the protein according to the present invention that do not inhibit the effect of the protein according to the present invention, if necessary.
- stabilizers, thickeners, extenders, binders and the like that are commonly used in this technical field may be further added.
- the form of the insecticide according to the present invention is not particularly limited, and may be used in the form of liquid, powder, granule, tablet or the like.
- the insecticide according to the present invention can be applied to a variety of monocotyledonous plants, dicotyledonous plants and other general plants in order to combat insects.
- monocotyledonous plants include gramineous plants and liliaceous plants.
- dicotyledonous plants include mulberry plants, cruciferous plants, legumes, eggplants, cucurbits, convolvulaceae, roses, mallows.
- the insecticide can be read as a method for controlling insects using the protein according to the present invention, or the use of the protein according to the present invention for controlling insects.
- the protein according to the present invention is preferably a protein derived from plant milk.
- the plant is preferably a mulberry plant.
- the polynucleotide according to the present invention is a polynucleotide encoding the protein according to the present invention.
- the polynucleotide according to the present invention is characterized by any of the following (I) to (IV): (I) a polynucleotide having the base sequence represented by SEQ ID NO: 4; (II) a polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 4 under stringent conditions and encodes a protein having chitinase activity; (III) a polynucleotide having the base sequence represented by SEQ ID NO: 5; (IV) A polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 5 under stringent conditions and encodes a protein having chitinase activity.
- the vector according to the present invention is characterized by including the polynucleotide according to the present invention.
- the transformant according to the present invention is characterized by being transformed with the vector according to the present invention.
- the insecticide according to the present invention is characterized by containing the protein according to the present invention.
- Example 1 Isolation and purification of novel protein and functional analysis
- Two novel proteins were isolated and purified from the soluble fraction of mulberry milk, and the functions of these novel proteins were analyzed.
- the solution was dialyzed overnight against buffer B using a dialysis membrane with a cutoff molecular weight of 25 kDa (Spectra / Por 7; Spectrum Laboratories Inc., Collinso Dominguez, CA, USA).
- the sample after dialysis was diluted to 50 ml.
- FIG. 1 shows the result of analyzing the soluble fraction of mulberry milk (corresponding to 0.025 ⁇ l of mulberry milk (stock solution)) by the SDS-PAGE method.
- the soluble fraction of mulberry milk was rich in two proteins with molecular weights of approximately 50 kDa and 46 kDa. These two kinds of proteins were named “LA (Latex-abundant) proteins”.
- LA-a protein A protein having a molecular weight of approximately 50 kDa
- LA-b protein a protein having a molecular weight of approximately 46 kDa
- CM-CellulofineuloC-200 Seikagaku Kogyo KK, Tokyo, Japan; 26 mm id ⁇ 100 mm
- the protein fraction was obtained.
- the fraction containing LA-b protein after hydrophobic chromatography was further subjected to gel filtration chromatography using a PD10 column (GE healthcare) and 10DG column (Bio-Rad, Hercules, CA, USA). Repeatedly desalted and replaced with buffer B.
- the sample after gel filtration chromatography was further subjected to cation chromatography to obtain a purified preparation of LA-b protein.
- cation chromatography a UNOS1 cation exchange column (Bio-Rad) was used, and elution was performed at a flow rate of 3.0 ml / min with a linear concentration gradient of 0 to 0.5 M NaCl in buffer B.
- a chromatogram of the result of cation exchange chromatography is shown in FIG.
- LA-a protein and 1.1 mg LA-b protein could be purified from 3 ml mulberry milk, respectively.
- the purity of the obtained LA-a protein and LA-b protein was analyzed by SDS-PAGE.
- the protein was detected by silver staining.
- FIG. 3 since only a single band was detected by the SDS-PAGE method, it was confirmed that the LA-a protein and the LA-b protein could be purified with high purity. did.
- the purified preparations of LA-a protein and LA-b protein were concentrated to a concentration of 1.0 mg / ml using Microcon YM-10 (Millipore Corp., Bedford, MA, USA), respectively. It was frozen using liquid nitrogen and stored at ⁇ 80 ° C.
- protein samples were separated by SDS-PAGE and electrically transferred to PVDF membrane using a Kyhse-Anderson buffer system (Kyhse-Andersen J: J Biochem Biophys Methods 1984, 10: 203- 209).
- the protein-transferred membrane was reacted with an anti-LA-a polyclonal antibody, and then reacted with an anti-rat antibody conjugated with alkaline phosphatase (Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT: Current Protocols in Protein Science John Wiley & Sons 1995).
- the film was then developed with a mixture of 5-bromo-4-chloro-3-indolyl phosphate (BCIP) and nitroblue tetrazolium (NBT).
- BCIP 5-bromo-4-chloro-3-indolyl phosphate
- NBT nitroblue tetrazolium
- Figure 4 shows the results of Western blotting. As shown in FIG. 4, the anti-LA-a protein antibody recognized not only LA-a protein but also LA-b protein. This result indicates that LA-a protein and LA-b protein are similar proteins, although the molecular weights are different from each other.
- the LA-a protein and the LA-b protein have similar amino acid sequences on the N-terminal side and both have a hevein domain.
- LA-a protein and LA-b protein (3 ⁇ g per lane) were separated by SDS-PAGE.
- the gel was stained with Pro-Q Emerald 300 (Invitrogen, Carlsbad, CA, USA), and then SYPRO Ruby stain ( Invitrogen, Carlsbad, CA, USA) was used to stain the gel.
- SYPRO Ruby stain Invitrogen, Carlsbad, CA, USA
- lectin blotting protein samples were separated by SDS-PAGE and electrically transferred to a PVDF membrane.
- the protein-transferred membrane was reacted with biotinylated RCA120 (Vector (Laboratories, Burlingame, CA, USA), and then reacted with streptavidin to which alkaline phosphatase was bound.
- the film was developed using a mixture of BCIP and NBT. Similar experiments were performed with other lectins (ConA, DBA, LCA, PHA-E4, PNA, UEQ-I, WGA, ABA, DSA, Lotus, MAM, PHA-L4, SBA, and SSA).
- lectins other than RCA120 were purchased from Seikagaku Corporation.
- LA-a protein and LA-b protein are glycoproteins.
- CM-chitin-RBV is a product of the chitin modified carboxymethyl (CM) chitin (which is colloidalized by chemical modification since it is insoluble) and labeled with RBV (a dye having absorption at 550 nm).
- RBV a dye having absorption at 550 nm.
- the amount of RBV solubilized is regarded as chitinolytic activity.
- Soluble chitosan (Chitosan, low molecular weight; Sigma-Aldrich, MO, USA) as a substrate according to the method of Osswald et al. (See Anal Biochem 1992, 204: 40-46) except that the enzymatic reaction was extended from 30 minutes to 2 hours. ) was used to perform a chitosanase assay by fluorescence analysis.
- As a buffer 0.1 M citrate-Na 2 HPO 4 buffer (pH 3 to 7) was used.
- the “soluble chitosan” is a compound solubilized by deacetylating insoluble chitin.
- FIG. 6 is a diagram showing the results of measuring the chitinase activity and chitosanase activity of LA-a protein and LA-b protein, (a) showing the measurement result of chitinase activity, and (b) showing the measurement result of chitosanase activity. Represents.
- the LA-a protein and LA-b protein had chitinase activity.
- the chitinase activity of LA-a protein and LA-b protein showed the maximum value at pH 5.
- LA-a protein and LA-b protein had chitosanase activity.
- the chitosanase activity of LA-a protein and LA-b protein showed the maximum value at pH 5.
- Example 2 Measurement of insecticidal properties
- Drosophila melanogaster (Canton-S strain) was bred at 25 ° C. on a standard yeast agar medium.
- To test the insecticidal properties of LA-a and LA-b proteins 15 second-instar larvae were placed in a vial containing 200 mg of Formula 4-24 instant Drosophila medium (Carolina Biological Supply, Burlington NC, USA). The rats were fed with 0.8 ml of PBS containing 0.1% (w / w) LA protein and 10 mg of Bacto Yeast Extract (Difco, Detroit, MI, USA) as a nitrogen source for 6 days.
- Formula 4-24 instant Drosophila medium Carolina Biological Supply, Burlington NC, USA
- control group is given the same diet as that described above except that it contains the same amount of bovine serum albumin (BSA) instead of the LA protein, or the control group described above except that it does not contain the protein instead of the LA protein.
- BSA bovine serum albumin
- the same bait was given.
- the vial was incubated at 25 ° C. For each test group, three vials were prepared for the experiment.
- LA-a protein administration group 0.1% (w / w) containing LA-a protein
- LA-b protein administration group containing 0.1% (w / w) LA-b protein
- Control group 1 Contains 0.1% (w / w) BSA instead of LA protein.
- Control group 2 Does not contain protein instead of LA protein.
- FIG. 7 is a diagram showing the influence of LA-a protein and LA-b protein on the development of Drosophila.
- A shows the number of Drosophila pupae given LA-a protein and the like, and 15 larvae LA-a protein and the like were given to the animals, and how many of them became pupae after 6 days.
- B shows life and death and developmental stage of Drosophila 6 days after feeding LA-a protein, etc., feeding 15 larvae, how many became pupae 6 days later, Or whether they died.
- the values shown in the graphs of (a) and (b) of FIG. 7 are shown as the average value ⁇ standard deviation of three vials.
- “No protein” represents the control group 2
- BSA represents the control group 1
- LA-a represents the LA-a protein administration group
- LA-b It represents the LA-b protein administration group.
- control group 1 or control group 2
- LA-a protein in any of pupa Pupa
- living larvae Larva (live)
- dead larvae Larva (dead)
- LA-a protein and LA-b protein have strong growth inhibitory activity and insecticidal activity against insects. Since both LA-a protein and LA-b protein have chitinase activity, LA-a protein and LA-b protein hydrolyze chitin on the body of Drosophila larvae or the surface of digestive sputum. It was thought that the growth of Drosophila larvae was inhibited and the larvae died.
- MLX56 a protein derived from mulberry milk
- has no chitinase activity and when MLX56 is ingested by several larvae of lepidopterous insects, it has been reported to show growth inhibition but not insecticidal properties.
- Patent Document 1 and Non-Patent Document 3 From this, it was confirmed that the LA-a protein and the LA-b protein are novel proteins having completely different functions from MLX56, which is a protein derived from mulberry milk.
- Example 3 Determination of amino acid sequence and nucleotide sequence
- the amino acid sequence and nucleotide sequence of LA-a protein and LA-b protein derived from mulberry milk were determined.
- nucleotide sequences of polynucleotides encoding LA-a protein and LA-b protein were determined. Specifically, mRNA was extracted and purified from mulberry milk according to a conventional method, and mRNA-seq analysis was performed on this using a GS-FLX DNA sequencer (Roche). From the obtained EST database, the nucleotide sequences shown in SEQ ID NOs: 4, 5 and 6 were found. The reason why these are LA-a and b is as described later. Cloning to express the LA-a protein and LA-b protein in E. coli was performed by reverse transcription from mRNA by Superscript III First strand Synthesis Supermix (Invitrogen) and the following specific primers prepared based on the coding region.
- Superscript III First strand Synthesis Supermix Invitrogen
- LA-a protein isolated from mulberry milk contains two isoforms. Therefore, the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4 is named “LA-a2 protein”, and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 is “LA-a1 protein”. Named. Further, it was revealed that the LA-b protein is a protein encoded by a polynucleotide having the base sequence shown in SEQ ID NO: 5.
- the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4 and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 have almost the same estimated molecular weight, and are distinguished by SDS-PAGE.
- the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 5 is smaller than these, the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4, The protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 is referred to as “LA-a protein”, and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 5 is referred to as “LA-b protein”. I concluded. The reason why the molecular weight estimated from the amino acid sequences of these three proteins was smaller than the molecular weight estimated from the SDS-PAGE mobility was thought to be due to the post-translational sugar chain modification.
- amino acid sequence of the LA-a2 protein (SEQ ID NO: 1)
- amino acid sequence of the LA-b protein (SEQ ID NO: 2)
- amino acid sequence of the LA-a1 protein (SEQ ID NO: 3) are respectively SEQ ID NOs: 4-6. It determined from the base sequence of polypeptide shown in.
- the protein according to the present invention has chitinase activity and exhibits sufficient insect resistance activity including insecticidal properties. Therefore, the protein according to the present invention is suitably used as an insecticide.
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Abstract
Description
本発明は、キチナーゼ活性を有しているタンパク質およびその利用に関する。 The present invention relates to a protein having chitinase activity and use thereof.
従来、殺虫・耐虫性が付与された代表的な遺伝子組換え植物(GM植物)として、グラム陽性細菌であるBacillus thuringiensisが生産するBt毒素をコードする遺伝子が導入された作物(例えば、トウモロコシ、ワタ等)が、米国等で実用化されている。かかるBt毒素は、低濃度(1ppm程度)で殺虫性を含む耐虫性活性を示すことが知られている(例えば、非特許文献1を参照)。しかし、Bt毒素に抵抗性を示す昆虫の出現が懸念されることから、Bt毒素以外の耐虫性タンパク質の実用化が望まれている。 Conventionally, as a representative genetically modified plant (GM plant) imparted with insecticidal and insect resistance, a crop into which a gene encoding a Bt toxin produced by a Gram-positive bacterium Bacillus thuringiensis (for example, corn, Have been put to practical use in the United States and the like. Such Bt toxins are known to exhibit insect-resistant activity including insecticidal properties at low concentrations (about 1 ppm) (see, for example, Non-Patent Document 1). However, since there are concerns about the emergence of insects that are resistant to Bt toxins, practical application of insect-resistant proteins other than Bt toxins is desired.
ところで、植物の乳液には、虫に対する毒性・成長阻害活性を示す物質が含まれていることが知られている。ここで、上記「乳液」とは、植物を傷つけた際に漏出する乳白色の粘性を有する液体であり、植物の乳管細胞に蓄積されている。40科20,000種の植物が乳液を有すると考えられている。 By the way, it is known that plant milk contains substances exhibiting toxicity and growth inhibitory activity against insects. Here, the above “milky lotion” is a milky white liquid that leaks when a plant is damaged, and is accumulated in the milk duct cells of the plant. It is believed that 20,000 species of 40 families have latex.
例えば、非特許文献2には、クワ乳液中に高濃度で含まれている3種の糖類似アルカロイド(1,4-dideoxy-1,4-imino-D-arabinitol(D-AB1)、1-deoxynojirimycin(DNJ)および1,4-dideoxy-1,4-imino-D-ribitol)は、糖分解・糖代謝酵素の阻害剤として機能し、その結果、エリサン(ヤママユガ科の広食性の鱗翅目昆虫)の幼虫に対して、成長阻害活性を示すことが開示されている。
For example, Non-Patent
さらに、特許文献1には、クワ(品種:しんいちのせ)の乳液からNative PAGEによって得られる画分1は、エリサン孵化幼虫に対して成長阻害活性を示すこと、および、上記画分1には、少なくとも56kDa、46KDa、30KDaおよび18KDaのタンパク質が含まれていることが開示されている。
Furthermore,
また、非特許文献3には、特許文献1においてエリサン孵化幼虫に対して成長阻害活性を示すことが示された上記画分1に含まれているタンパク質を、DEAEセファロースカラムでさらに精製し、得られたタンパク質のひとつを、MLX56と名づけたことが開示されている。
しかし、非特許文献2に開示された糖類似アルカロイド、特許文献1に開示された画分1および非特許文献3に開示されたMLX56は、虫に対する成長阻害活性は有しているものの、殺虫性は有していない。このため、耐虫性活性が不十分である。また、糖類似アルカロイドはタンパク質ではないため、GM植物の作出に利用することができない。それゆえ、殺虫性を含む十分な耐虫性活性を有する耐虫性タンパク質が望まれている。
However, the sugar-like alkaloid disclosed in
そもそも、特許文献1に開示された画分1には、少なくとも4種類の異なる分子量を有するタンパク質が含まれていることから、どのタンパク質が虫に対する成長阻害活性を示しているのか明確にされていない。また、非特許文献3では、得られたタンパク質のひとつをMLX56と名づけたことが開示されているが、非特許文献3のFig.2bのlane2を見るに、DEAEセファロースカラムで精製して得られたタンパク質は、分子量が56kDaのタンパク質ではなく、分子量が45kDaのタンパク質が得られており、しかも、やや泳動度の高い別のバンドも混入している。このため、非特許文献3ではMLX56が成長阻害活性を有していることを証明できていない。
In the first place, since
本発明は、上記の問題点に鑑みてなされたものであり、その目的は、殺虫性を含む十分な耐虫性活性を有するタンパク質およびその利用を提供することにある。 The present invention has been made in view of the above problems, and an object of the present invention is to provide a protein having sufficient insect-resistant activity including insecticidal properties and use thereof.
本発明者は、クワ(Morus alba)(みなみさかり品種)の乳液の可溶画分から2種類の新規タンパク質(LA-aタンパク質およびLA-bタンパク質)を単離し、機能解析を行った。その結果、これらのタンパク質はキチナーゼ活性を有していることを見出した。さらに、驚くべきことに、これらのタンパク質を飼料として幼虫に与えると、タンパク質を与えなかった場合と比較して顕著な殺虫性を示すことを初めて見出し、かかる新規知見に基づいて本発明を完成させるに至った。 The present inventor isolated two kinds of novel proteins (LA-a protein and LA-b protein) from the soluble fraction of mulberry (Morisakari varieties) milk and performed functional analysis. As a result, it was found that these proteins have chitinase activity. Furthermore, surprisingly, when these proteins are fed to larvae as a feed, it has been found for the first time that they show remarkable insecticidal properties compared to the case where no protein is given, and the present invention is completed based on such new findings. It came to.
これまで、クワの乳液に、キチナーゼ活性を有し、且つ殺虫性を有するタンパク質が存在しているということは一切知られていない。したがって、クワの乳液に、キチナーゼ活性を有し、且つ殺虫性を有するタンパク質が存在していることは、本発明者が初めて見出し、ここに開示するものである。 Until now, it has never been known that mulberry milk contains a protein having chitinase activity and insecticidal properties. Therefore, the present inventor found for the first time that the protein having chitinase activity and insecticidal properties is present in the mulberry emulsion, and is disclosed herein.
すなわち、本発明に係るタンパク質は、下記(a)~(d)の何れかを特徴としている:
(a)配列番号1に示すアミノ酸配列からなるタンパク質;
(b)配列番号1に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質;
(c)配列番号2に示すアミノ酸配列からなるタンパク質;
(d)配列番号2に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質。
That is, the protein according to the present invention is characterized by any of the following (a) to (d):
(A) a protein comprising the amino acid sequence shown in SEQ ID NO: 1;
(B) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 1 and having chitinase activity;
(C) a protein consisting of the amino acid sequence shown in SEQ ID NO: 2;
(D) A protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 2 and having chitinase activity.
本発明のさらに他の目的、特徴、および優れた点は、以下に示す記載によって十分わかるであろう。また、本発明の利益は、添付図面を参照した次の説明で明白になるであろう。 Further objects, features, and superior points of the present invention will be fully understood from the following description. The benefits of the present invention will become apparent from the following description with reference to the accompanying drawings.
本発明に係るタンパク質は、キチナーゼ活性を有するタンパク質であり、殺虫性を含む十分な耐虫性活性を有している。すなわち、本発明に係るタンパク質は、虫を死滅させる、虫を弱体化させる、または虫の成長を阻害する活性が、従来のタンパク質よりも優れている。このため、本発明に係るタンパク質は、耐虫剤、殺虫剤、耐虫用餌等として好適に利用することができる。 The protein according to the present invention is a protein having chitinase activity and has sufficient insect resistance activity including insecticidal properties. That is, the protein according to the present invention is superior to conventional proteins in killing insects, weakening insects, or inhibiting insect growth. For this reason, the protein which concerns on this invention can be utilized suitably as an insecticide, an insecticide, an insect-proof bait, etc.
また、本発明に係るポリヌクレオチドは、本発明に係るタンパク質をコードしているので、かかるポリヌクレオチドを用いることによって、本発明に係るタンパク質を発現させるためのベクターを作製することができる。 Moreover, since the polynucleotide according to the present invention encodes the protein according to the present invention, a vector for expressing the protein according to the present invention can be prepared by using such a polynucleotide.
また、本発明に係るベクターは、本発明に係るポリヌクレオチドを含む構成であるため、かかるベクターを、宿主細胞(例えば、酵母、大腸菌(Escherichia coli)、昆虫細胞、植物細胞、哺乳類細胞等)に導入することによって、本発明に係るタンパク質を発現する形質転換体を得ることができる。 In addition, since the vector according to the present invention is configured to contain the polynucleotide according to the present invention, such a vector can be used in a host cell (eg, yeast, Escherichia coli, insect cell, plant cell, mammalian cell, etc.). By introducing, a transformant expressing the protein according to the present invention can be obtained.
また、本発明に係る形質転換体は、上述したように、本発明に係るタンパク質を発現しているので、当該タンパク質を調製するために用いることができる。また、かかる形質転換体が形質転換植物体である場合は、かかる形質転換植物体は、本発明に係るタンパク質を発現することによって耐虫性活性を有しているので、かかる形質転換植物体に対しては、殺虫剤等の農薬散布の作業を省くことができる。 Moreover, since the transformant according to the present invention expresses the protein according to the present invention as described above, it can be used to prepare the protein. Further, when such a transformant is a transformed plant, the transformed plant has insect resistance activity by expressing the protein according to the present invention. On the other hand, the work of spraying pesticides such as insecticides can be omitted.
また、本発明に係る耐虫剤は、本発明に係るタンパク質を有しているので、耐虫性活性に優れている。 Moreover, since the insecticide according to the present invention has the protein according to the present invention, it is excellent in insect resistance activity.
以下、本発明の実施の形態について、詳細に説明する。ただし、本発明はこれに限定されるものではなく、記述した範囲内で種々の変形を加えた態様で実施できるものである。また、本明細書中に記載された学術文献および特許文献の全てが、本明細書中において参考として援用される。なお、本明細書において特記しない限り、数値範囲を表す「A~B」は、「A以上、B以下」を意味する。 Hereinafter, embodiments of the present invention will be described in detail. However, the present invention is not limited to this, and can be implemented in a mode in which various modifications are made within the described range. Moreover, all the academic literatures and patent literatures described in this specification are incorporated herein by reference. Unless otherwise specified in this specification, “A to B” representing a numerical range means “A or more and B or less”.
〔1.本発明に係るタンパク質〕
本発明に係るタンパク質は、下記(a)~(d)の何れかを特徴としているタンパク質である:
(a)配列番号1に示すアミノ酸配列からなるタンパク質;
(b)配列番号1に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質;
(c)配列番号2に示すアミノ酸配列からなるタンパク質;
(d)配列番号2に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質。
[1. Protein according to the present invention]
The protein according to the present invention is a protein characterized by any of the following (a) to (d):
(A) a protein comprising the amino acid sequence shown in SEQ ID NO: 1;
(B) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 1 and having chitinase activity;
(C) a protein consisting of the amino acid sequence shown in SEQ ID NO: 2;
(D) A protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 2 and having chitinase activity.
なお、配列番号1に示すアミノ酸配列からなるタンパク質は、後述する実施例に示す「LA-a2タンパク質」に相当し、配列番号2に示すアミノ酸配列からなるタンパク質は、後述する実施例に示す「LA-bタンパク質」に相当している。 The protein consisting of the amino acid sequence shown in SEQ ID NO: 1 corresponds to the “LA-a2 protein” shown in the examples described later, and the protein consisting of the amino acid sequence shown in SEQ ID NO: 2 is referred to as “LA in the examples described later”. -B protein ".
ここで、上記「1または数個のアミノ酸が欠失、置換および/または付加された」とは、1または数個のアミノ酸が欠失、置換および/または付加される前のタンパク質のアミノ酸配列に対して、少なくとも83%より高い同一性、好ましくは少なくとも92%より高い同一性、より好ましくは少なくとも95%より高い同一性、最も好ましくは少なくとも97%より高い同一性を有するように、1または数個のアミノ酸が欠失、置換および/または付加されていることを意味する。 Here, the above “one or several amino acids are deleted, substituted and / or added” means that the amino acid sequence of the protein before one or several amino acids are deleted, substituted and / or added. 1 or a number such that it has an identity of at least greater than 83%, preferably greater than at least 92%, more preferably greater than at least 95%, most preferably greater than at least 97%. Means that one amino acid has been deleted, substituted and / or added.
1または数個のアミノ酸が欠失、置換および/または付加される部位は、アミノ酸が欠失、置換および/または付加された後のタンパク質がキチナーゼ活性を有していれば、該アミノ酸配列中のどの部位であってもよい。 The site where one or several amino acids are deleted, substituted and / or added is defined in the amino acid sequence if the protein after the deletion, substitution and / or addition of amino acids has chitinase activity. Any site may be used.
アミノ酸配列の同一性は、株式会社ゼネティックス製の解析ソフトGenetyxを用いて決定できる。かかるソフトは、Lipman-Pearson法(Lipman DJ, Pearson WR. Rapid and sensitive protein similarity searches. Science. 1985 Mar 22;227(4693):1435-41.)によるプログラム“FASTA”を用いるソフトである。 The identity of amino acid sequences can be determined using analysis software Genetyx manufactured by Genetics Co., Ltd. Such software is software that uses the program “FASTA” according to the Lipman-Pearson method (Lipman DJ, Pearson WR. Rapid, and sensitive sensitive protein, similarity, searches, Science, 1985, Mar 22, 227 (4693): 1435-41.).
このような変異タンパク質は、公知の変異ポリペプチド作製法により人為的に導入された変異を有するタンパク質に限定されるものではなく、天然に存在するタンパク質を単離精製したものであってもよい。タンパク質のアミノ酸配列中のいくつかのアミノ酸が、このタンパク質の構造または機能に有意に影響することなく容易に改変され得ることは、当該分野において周知である。さらに、人為的に改変させるだけでなく、天然のタンパク質において、当該タンパク質の構造または機能を有意に変化させない変異体が存在することもまた周知である。 Such a mutant protein is not limited to a protein having a mutation artificially introduced by a known mutant polypeptide production method, and may be a protein obtained by isolating and purifying a naturally occurring protein. It is well known in the art that some amino acids in the amino acid sequence of a protein can be easily modified without significantly affecting the structure or function of the protein. Furthermore, it is also well known that there are variants that not only artificially modify, but also do not significantly alter the structure or function of the protein in the native protein.
好ましい変異体は、保存性もしくは非保存性置換、欠失および/または付加を有する。好ましい変異としては、サイレント置換、欠失および付加であり、特に好ましくは、保存性置換である。これらの変異は、本発明に係るタンパク質のキチナーゼ活性を変化させない。 Preferred variants have conservative or non-conservative substitutions, deletions and / or additions. Preferred mutations are silent substitutions, deletions and additions, and particularly preferred are conservative substitutions. These mutations do not change the chitinase activity of the protein according to the invention.
代表的に保存性置換と見られるのは、脂肪族アミノ酸Ala、Val、Leu、およびIleの中での1つのアミノ酸の別のアミノ酸への置換、ヒドロキシル残基SerおよびThrの交換、酸性残基AspおよびGluの交換、アミド残基AsnおよびGlnの間の置換、塩基性残基LysおよびArgの交換、ならびに芳香族残基Phe、Tyrの間の置換である。 Typically seen as conservative substitutions are substitutions of one amino acid for another in the aliphatic amino acids Ala, Val, Leu, and Ile, exchange of hydroxyl residues Ser and Thr, acidic residues Asp and Glu exchange, substitution between amide residues Asn and Gln, exchange of basic residues Lys and Arg, and substitution between aromatic residues Phe, Tyr.
例えば、上記(b)のタンパク質には、後述する実施例に示す「LA-a1タンパク質」(配列番号3)が含まれる。「LA-a1タンパク質」は、配列番号1に示すアミノ酸配列において、10個のアミノ酸残基が置換され、2個のアミノ酸残基が付加(挿入)され、且つ9個のアミノ酸残基が欠失されたタンパク質である。「LA-a2タンパク質」と「LA-a1タンパク質」とのアミノ酸配列の同一性は、94%である。 For example, the above protein (b) includes “LA-a1 protein” (SEQ ID NO: 3) shown in the Examples described later. The “LA-a1 protein” has 10 amino acid residues substituted, 2 amino acid residues added (inserted), and 9 amino acid residues deleted in the amino acid sequence shown in SEQ ID NO: 1. Protein. The amino acid sequence identity between “LA-a2 protein” and “LA-a1 protein” is 94%.
また、本発明に係るタンパク質には、例えば、分子間および/または分子内架橋(例えば、ジスルフィド結合等)が施されたもの、化学修飾(例えば、糖鎖、リン酸もしくはその他の官能基等)されたもの、標識(例えば、ヒスチジンタグ等)が付与されたもの、または融合タンパク質(例えば、ストレプトアビジン、シトクロム、およびGFP等)を付与されたもの等が含まれるが、特にこれらに限定されない。 In addition, the protein according to the present invention has, for example, an intermolecular and / or intramolecular crosslink (for example, disulfide bond), chemical modification (for example, sugar chain, phosphate, or other functional group). However, the present invention is not particularly limited to these, and those to which a label (for example, a histidine tag or the like) or a fusion protein (for example, streptavidin, cytochrome, GFP, or the like) has been added.
本発明に係るタンパク質は、キチナーゼ活性を示している。ここで、本明細書において、従来公知のキチナーゼ活性測定方法によって測定した、測定対象タンパク質のキチナーゼ活性が、反応液に測定対象タンパク質を含んでいない以外は同一測定条件で測定したバックグラウンドのキチナーゼ活性に比べて有意に高ければ、当該測定対象タンパク質は「キチナーゼ活性を有している」といえる。 The protein according to the present invention exhibits chitinase activity. Here, in this specification, the background chitinase activity measured under the same measurement conditions except that the measurement target protein does not contain the measurement target protein, as measured by a conventionally known chitinase activity measurement method. If it is significantly higher than, the protein to be measured can be said to have “chitinase activity”.
なお、本明細書において、「有意に」と記載した場合は、従来公知のtukey検定を用いて統計解析を行なった場合に、比較するもの同士の間に、危険率5%未満、好ましくは危険率1%未満、より好ましくは危険率0.5%未満において有意差があることを意図している。 In the present specification, when “significantly” is described, when statistical analysis is performed using a conventionally known tukey test, the risk rate is less than 5%, preferably dangerous. It is intended that there is a significant difference at a rate of less than 1%, more preferably at a risk rate of less than 0.5%.
例えば、tukey検定を用いて統計解析を行なった場合に、測定対象タンパク質のキチナーゼ活性と、反応液に測定対象タンパク質を含んでいない以外は同一測定条件で測定したバックグラウンドのキチナーゼ活性との間に、危険率5%未満、好ましくは危険率1%未満、より好ましくは危険率0.5%未満において有意差がある場合に、当該測定対象タンパク質は「キチナーゼ活性を有している」といえる。 For example, when statistical analysis is performed using the tukey test, between the chitinase activity of the protein to be measured and the background chitinase activity measured under the same measurement conditions except that the reaction solution does not contain the protein to be measured. When the risk rate is less than 5%, preferably less than 1%, more preferably less than 0.5%, the protein to be measured can be said to have “chitinase activity”.
より好ましくは、上記(a)のタンパク質のキチナーゼ活性を100%とした場合に、当該(a)のタンパク質と同一測定条件における上記(b)のタンパク質のキチナーゼ活性が、10%以上、好ましくは15%以上、より好ましくは25%以上であればよい。同様に、上記(c)のタンパク質のキチナーゼ活性を100%とした場合に、当該(c)のタンパク質と同一測定条件における上記(d)のタンパク質のキチナーゼ活性が、10%以上、好ましくは15%以上、より好ましくは25%以上であればよい。 More preferably, when the chitinase activity of the protein (a) is 100%, the chitinase activity of the protein (b) under the same measurement conditions as the protein (a) is 10% or more, preferably 15 % Or more, more preferably 25% or more. Similarly, assuming that the protein (c) has a chitinase activity of 100%, the protein (d) has a chitinase activity of 10% or more, preferably 15%, under the same measurement conditions as the protein (c). More preferably, it may be 25% or more.
上記「キチナーゼ活性測定方法」としては、例えば、後述する実施例の「キチナーゼ活性の測定方法」の項において説明した方法を挙げることができるが、本発明はこれに限定されない。後述する実施例の「キチナーゼ活性の測定方法」の項において説明した方法において、基質としての色素標識キチンCMchitin-RBV(Loewe Biochemica, Munchen, Germany)の代わりに、色素で標識していないコロイド状キチン(colloidal chitin)、4-Nitrophenyl N-acetyl-β-D-glucosaminide(Sigma-aldrichから入手可能)、または4-メチルウンベリフェルN,N′-ジアセチル-β-D-キトビオシド(Sigma-aldrichから入手可能)を用いる方法等がある。 Examples of the “chitinase activity measuring method” include the methods described in the “chitinase activity measuring method” section of Examples described later, but the present invention is not limited thereto. Colloidal chitin not labeled with a dye in place of the dye-labeled chitin CMchitin-RBV (Loewe Biochemica, Munchen, Germany) as a substrate in the method described in the section “Method for measuring chitinase activity” in Examples described later (Colloidal chitin), 4-Nitrophenyl N-acetyl-β-D-glucosaminide (available from Sigma-aldrich), or 4-methylumbellifer N, N'-diacetyl-β-D-chitobioside (obtained from Sigma-aldrich) Possible).
また、本発明に係るタンパク質は、耐虫性活性を有する。ここで、上記「耐虫性活性」とは、虫を死滅させる活性(以下「殺虫性」という)、虫を弱体化させる活性、または虫の成長を阻害する活性(以下「成長阻害活性」という。)を意味する。例えば、後述する実施例に示すように、本発明に係るタンパク質を含有する餌を虫の幼虫に与え、かかる餌を摂取した虫が、コントロールと比較して有意に死滅するもしくは弱体化する、またはコントロールと比較して、上記餌を摂取した虫の成長が有意に阻害(遅延)されれば、本発明に係るタンパク質が耐虫性活性を有していると判断することができる。なお、上記「コントロール」とは、本発明に係るタンパク質を餌に含有させない以外は、同じ条件で餌を与えた虫(または虫の集団)を意味している。 Further, the protein according to the present invention has insect resistance activity. Here, the “insect resistance activity” refers to an activity that kills insects (hereinafter referred to as “insecticidal”), an activity that weakens insects, or an activity that inhibits insect growth (hereinafter referred to as “growth inhibitory activity”). .) For example, as shown in the examples described below, a bait containing a protein according to the present invention is given to an insect larvae, and the insect that ingests the bait is significantly killed or weakened compared to the control, or If the growth of the insect that ingested the food is significantly inhibited (delayed) as compared with the control, it can be determined that the protein according to the present invention has insect-resistant activity. The “control” means an insect (or a group of insects) fed with the same conditions except that the protein according to the present invention is not contained in the food.
本発明に係るタンパク質はキチナーゼ活性を有するため、本発明に係るタンパク質に接触するまたは本発明に係るタンパク質を摂取することによって、虫の体または消化菅表面のキチン質が加水分解される結果、耐虫性活性を示すと考えられる。 Since the protein according to the present invention has chitinase activity, the contact with the protein according to the present invention or ingestion of the protein according to the present invention results in hydrolysis of the chitin on the body of the insect or digestive sputum, resulting in resistance to resistance. It is thought to show worm activity.
本発明に係るタンパク質が耐虫性活性を示す虫としては、本発明に係るタンパク質に接触するまたは本発明に係るタンパク質を摂取することによって、死滅する、弱体化する、または成長が阻害(遅延)される虫であれば、特に限定されない。このような虫としては、例えば、鞘翅目、鱗翅目、双翅目、膜翅目、半翅目、直翅目、蜻翅目等の昆虫、ダニ、等の節足動物を挙げることができる。 As an insect in which the protein according to the present invention exhibits insect-resistant activity, it is killed, weakened, or inhibited by growth (delay) by contacting the protein according to the present invention or ingesting the protein according to the present invention. If it is a bug to be done, it will not be specifically limited. Examples of such insects include arthropods such as Coleoptera, Lepidoptera, Diptera, Hymenoptera, Hemiptera, Diptera, Lepidoptera, etc., ticks, etc. .
本発明に係るタンパク質は、殺虫性を含む耐虫性活性を有するので、殺虫剤、耐虫剤、耐虫用餌等として好適に利用可能である。 Since the protein according to the present invention has insect-resistant activity including insecticidal properties, it can be suitably used as an insecticide, insecticide, insect-resistant bait, and the like.
ここで、上記「耐虫用餌」とは、虫に摂取させることにより、耐虫性活性を発揮させる餌を意味する。すなわち、本発明に係るタンパク質を含有している耐虫性餌を摂取した虫は、成長が阻害(遅延)される、または死滅もしくは弱体化するので、虫を簡便に駆除することができる。 Here, the above “insect-resistant bait” means a bait that exhibits insect-resistant activity when ingested by insects. That is, since the insect that ingested the insect-resistant bait containing the protein according to the present invention is inhibited (delayed) or killed or weakened, the insect can be easily exterminated.
本発明に係るタンパク質は、キトサナーゼ活性をさらに有していてもよい。ここで、本明細書において、従来公知のキトサナーゼ活性測定方法によって測定した、測定対象タンパク質のキトサナーゼ活性が、反応液に測定対象タンパク質を含んでいない以外は同一測定条件で測定したバックグラウンドのキトサナーゼ活性に比べて有意に高ければ、当該測定対象タンパク質は「キトサナーゼ活性を有している」といえる。 The protein according to the present invention may further have chitosanase activity. Here, in this specification, the background chitosanase activity measured under the same measurement conditions except that the measurement target protein does not contain the measurement target protein, as measured by a conventionally known chitosanase activity measurement method. If it is significantly higher than the above, the protein to be measured can be said to have “chitosanase activity”.
より好ましくは、上記(a)のタンパク質のキトサナーゼ活性を100%とした場合に、当該(a)のタンパク質と同一測定条件における上記(b)のタンパク質のキトサナーゼ活性が、10%以上、好ましくは15%以上、より好ましくは25%以上であればよい。同様に、上記(c)のタンパク質のキトサナーゼ活性を100%とした場合に、当該(c)のタンパク質と同一測定条件における上記(d)のタンパク質のキトサナーゼ活性が、10%以上、好ましくは15%以上、より好ましくは25%以上であればよい。 More preferably, when the chitosanase activity of the protein of (a) is 100%, the chitosanase activity of the protein of (b) under the same measurement conditions as the protein of (a) is 10% or more, preferably 15 % Or more, more preferably 25% or more. Similarly, when the chitosanase activity of the protein (c) is 100%, the chitosanase activity of the protein (d) under the same measurement conditions as the protein (c) is 10% or more, preferably 15% More preferably, it may be 25% or more.
上記「キトサナーゼ活性測定方法」としては、例えば、後述する実施例の「キトサナーゼ活性の測定方法」の項において説明した方法を挙げることができるが、本発明はこれに限定されない。 Examples of the “chitosanase activity measuring method” include the method described in the section “Method for measuring chitosanase activity” in Examples described later, but the present invention is not limited thereto.
本発明に係るタンパク質は、例えば、アミノ酸合成機等を用いて化学合成されてもよいし、遺伝子組み換え技術を用いて生産されてもよいし、天然に存在するタンパク質を単離精製したものであってもよい。 The protein according to the present invention may be chemically synthesized using an amino acid synthesizer or the like, may be produced using a gene recombination technique, or is a product obtained by isolating and purifying a naturally occurring protein. May be.
アミノ酸合成機等を用いてタンパク質を化学合成する場合、従来公知のペプチド合成法(例えば、固相合成法、液相合成法)によってタンパク質を化学合成することができる。 When a protein is chemically synthesized using an amino acid synthesizer or the like, the protein can be chemically synthesized by a conventionally known peptide synthesis method (for example, solid phase synthesis method, liquid phase synthesis method).
また、遺伝子組換え技術を用いて生産する場合、本発明に係るタンパク質を発現させることができれば組換えタンパク質発現系は特に限定されない。例えば、従来公知の大腸菌発現系、昆虫細胞発現系、植物細胞発現系、哺乳類細胞発現系、無細胞発現系等を好適に用いることができる。 In addition, when producing using gene recombination technology, the recombinant protein expression system is not particularly limited as long as the protein according to the present invention can be expressed. For example, conventionally known E. coli expression systems, insect cell expression systems, plant cell expression systems, mammalian cell expression systems, cell-free expression systems, and the like can be suitably used.
天然に存在するタンパク質を単離精製する場合、その精製方法は特に限定されるものではないが、例えば、後述する実施例に示すように、植物の乳液の可溶画分から精製することができる。植物の乳液の可溶画分は、例えば、植物から採取した乳液を遠心分離し、上清を回収することによって得ることができる。得られた可溶画分から、本発明に係るタンパク質を精製する手段としては、イオン交換クロマトグラフィー、疎水クロマトグラフィー、ゲル濾過クロマトグラフィー等を挙げることができる。これらの精製手段は、1種類を単独で行ってもよく、複数を組み合わせて行ってもよい。複数を組み合わせる場合は、組み合わせる順序は特に制限されない。 In the case of isolating and purifying a naturally occurring protein, the purification method is not particularly limited. For example, as shown in Examples described later, it can be purified from a soluble fraction of plant emulsion. The soluble fraction of plant emulsion can be obtained, for example, by centrifuging the emulsion collected from the plant and collecting the supernatant. Examples of means for purifying the protein according to the present invention from the obtained soluble fraction include ion exchange chromatography, hydrophobic chromatography, gel filtration chromatography and the like. These purification means may be performed alone or in combination. When combining a plurality, the combination order is not particularly limited.
例えば、本発明に係るタンパク質は、植物の乳液の可溶画分を疎水クロマトグラフィーに供する工程を少なくとも含む方法によって植物の乳液から単離精製することができる。上記構成であれば、本発明に係るタンパク質のうち、上記(a)~(d)のタンパク質を、高純度で精製することができる。 For example, the protein according to the present invention can be isolated and purified from plant milk by a method including at least a step of subjecting a soluble fraction of plant milk to hydrophobic chromatography. With the above configuration, among the proteins according to the present invention, the proteins (a) to (d) can be purified with high purity.
なお、疎水クロマトグラフィーの条件は、用いるカラムの種類、移動相の種類、流速、サンプルのアプライ量等に応じて当業者が適宜設定することができる。例えば、後述する実施例に示すように、HiLoad 16/10 phenyl sepharose HPカラム(16 mm i.d. × 100 mm; GE healthcare, Piscataway, NJ, USA)を用い、30%飽和硫酸アンモニウムから0%飽和硫酸アンモニウムへの直線的な濃度勾配により、流速2ml/分でタンパク質の溶出すればよい。 The conditions for hydrophobic chromatography can be appropriately set by those skilled in the art according to the type of column used, the type of mobile phase, the flow rate, the amount of sample applied, and the like. For example, as shown in the examples described later, using a HiLoad 16/10 phenyl sepharose HP column (16 mm id × 100 mm; GE healthcare, Piscataway, NJ, USA), 30% saturated ammonium sulfate to 0% saturated ammonium sulfate The protein may be eluted at a flow rate of 2 ml / min with a linear concentration gradient.
また、上記精製方法は、上記植物の乳液の可溶画分を疎水クロマトグラフィーに供する工程後の試料を、陽イオン交換クロマトグラフィーに供する工程をさらに含んでいることが好ましい。上記構成であれば、本発明に係るタンパク質のうち、特に、上記(e)または(f)のタンパク質を、高純度で精製することができる。 In addition, the purification method preferably further includes a step of subjecting the sample after the step of subjecting the soluble fraction of the plant emulsion to hydrophobic chromatography, and subjecting the sample to cation exchange chromatography. If it is the said structure, especially the protein of said (e) or (f) can be refine | purified with high purity among the proteins which concern on this invention.
なお、陽イオン交換クロマトグラフィーの条件は、用いるカラムの種類、移動相の種類、流速、サンプルのアプライ量等に応じて当業者が適宜設定することができる。例えば、後述する実施例に示すように、UNOS1 cationexchangeカラム(Bio-Rad)を用い、バッファ(10mM リン酸カルシウム、1mM EDTA、pH6.0)における0~0.5M NaClの直線的な濃度勾配により、流速3.0ml/分で溶出すればよい。 The conditions for cation exchange chromatography can be appropriately set by those skilled in the art according to the type of column used, the type of mobile phase, the flow rate, the amount of sample applied, and the like. For example, as shown in the examples described later, a flow rate is measured by using a linear concentration gradient of 0 to 0.5 M NaCl in a buffer (10 mM calcium phosphate, 1 mM EDTA, pH 6.0) using a UNOS1 cation exchange column (Bio-Rad). It may be eluted at 3.0 ml / min.
本発明に係るタンパク質は、植物の乳液(Latex)由来のタンパク質であることが好ましい。植物の乳液由来であれば、植物由来の糖鎖が付加されたタンパク質を得ることができる。上記「植物」としては、乳液を有する植物であれば特に限定されない。このような植物としては、具体的には、例えば、クワ科植物、キク科植物、キキョウ科植物、ヒルガオ科植物、トウダイグサ科植物、ガガイモ科植物、キョウチクトウ科植物、バショウ科植物、ケシ科植物、ウルシ科植物、オトギリソウ科植物、マメ科植物、サボテン科植物、ユリ科植物等を挙げることができる。これらの植物の中でも、特に、上記植物がクワ科植物であることが好ましい。 The protein according to the present invention is preferably a protein derived from a plant latex. If it is derived from a plant emulsion, a protein having a plant-derived sugar chain added thereto can be obtained. The “plant” is not particularly limited as long as it is a plant having an emulsion. Specific examples of such plants include, for example, moraceae plants, asteraceae plants, asteraceae plants, convolvulaceae plants, euphorbiaceae plants, potato family plants, oleander plant plants, cinnamon family plants, poppy family plants, Examples include urushiaceae plants, hypericaceae plants, legumes, cactaceae plants, and liliaceae plants. Among these plants, it is particularly preferable that the plant is a mulberry plant.
〔2.本発明に係るポリヌクレオチド〕
本発明に係るポリヌクレオチドは、本発明に係るタンパク質をコードするポリヌクレオチドであることを特徴としている。
[2. Polynucleotide according to the present invention]
The polynucleotide according to the present invention is a polynucleotide encoding the protein according to the present invention.
ここで、ポリヌクレオチドは、DNAの形態(例えば、cDNAもしくはゲノムDNA)、またはRNA(例えば、mRNA)の形態で存在し得る。DNAまたはRNAは二本鎖であっても、一本鎖であってもよい。一本鎖DNAまたはRNAは、コード鎖(センス鎖)であっても、非コード鎖(アンチセンス鎖)であってもよい。 Here, the polynucleotide may exist in the form of DNA (for example, cDNA or genomic DNA) or RNA (for example, mRNA). DNA or RNA may be double-stranded or single-stranded. Single-stranded DNA or RNA may be a coding strand (sense strand) or a non-coding strand (antisense strand).
また、本発明に係るポリヌクレオチドは化学的に合成してもよく、コードするタンパク質の発現が向上するように、コドンユーセージ(Codon usage)を変更してもよい。 Further, the polynucleotide according to the present invention may be chemically synthesized, and the codon usage may be changed so that expression of the encoded protein is improved.
本発明に係るポリヌクレオチドを改変する方法としては、通常行われるポリヌクレオチド改変方法が用いられる。すなわち、タンパク質の遺伝情報を有するポリヌクレオチドの特定の塩基を置換、欠失および/または付加することで、組換えタンパク質の遺伝情報を有するポリヌクレオチドを作製してもよい。ポリヌクレオチドの塩基を変換する具体的な方法としては、例えばポリメラーゼ連鎖反応法(PCR法)の利用が挙げられる。これらの方法は当業者に公知である。 As a method for modifying a polynucleotide according to the present invention, a commonly used method for modifying a polynucleotide is used. That is, a polynucleotide having genetic information of a recombinant protein may be prepared by substituting, deleting, and / or adding a specific base of a polynucleotide having protein genetic information. As a specific method for converting the base of the polynucleotide, for example, use of a polymerase chain reaction method (PCR method) can be mentioned. These methods are known to those skilled in the art.
本発明に係るポリヌクレオチドは、本発明に係るタンパク質をコードしていればその塩基配列は特に限定されるものではない。よって本発明に係るタンパク質のアミノ酸配列に応じた塩基配列からなる全てのポリヌクレオチドが本発明に含まれる。 The nucleotide sequence of the polynucleotide according to the present invention is not particularly limited as long as it encodes the protein according to the present invention. Therefore, the present invention includes all polynucleotides having a base sequence corresponding to the amino acid sequence of the protein according to the present invention.
本発明に係るポリヌクレオチドの一実施形態としては、例えば、下記(I)~(IV)の何れかのポリヌクレオチドであり得る:
(I)配列番号4に示す塩基配列を有するポリヌクレオチド;
(II)配列番号4に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド;
(III)配列番号5に示す塩基配列を有するポリヌクレオチド;
(IV)配列番号5に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド。
As one embodiment of the polynucleotide according to the present invention, for example, it may be any of the following polynucleotides (I) to (IV):
(I) a polynucleotide having the base sequence represented by SEQ ID NO: 4;
(II) a polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 4 under stringent conditions and encodes a protein having chitinase activity;
(III) a polynucleotide having the base sequence represented by SEQ ID NO: 5;
(IV) A polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 5 under stringent conditions and encodes a protein having chitinase activity.
なお、配列番号4に示す塩基配列を有するポリヌクレオチドは、配列番号1に示すアミノ酸配列を有するタンパク質、すなわち、後述する実施例に示す「LA-a2タンパク質」をコードするポリヌクレオチドであり、配列番号5に示す塩基配列を有するポリヌクレオチドは、配列番号2に示すアミノ酸配列を有するタンパク質、すなわち、後述する実施例に示す「LA-bタンパク質」をコードするポリヌクレオチドである。 The polynucleotide having the base sequence shown in SEQ ID NO: 4 is a polynucleotide encoding the protein having the amino acid sequence shown in SEQ ID NO: 1, ie, “LA-a2 protein” shown in the Examples described later. The polynucleotide having the base sequence shown in 5 is a polynucleotide encoding the protein having the amino acid sequence shown in SEQ ID NO: 2, that is, the “LA-b protein” shown in the Examples described later.
本発明の一実施形態では、本発明に係るポリヌクレオチドは、化学的に合成された塩基で置換されてもよい。また、本発明に係るポリヌクレオチドが置換される部位は特に限定されず、置換後の塩基配列がコードするタンパク質が好適な性質を有していればよい。つまり、置換後の塩基配列がコードするタンパク質がキチナーゼ活性を有していればよい。例えば、このようなポリヌクレオチドには、後述する実施例に示す「LA-a1タンパク質」をコードするポリヌクレオチド(配列番号6)が含まれる。 In one embodiment of the present invention, the polynucleotide according to the present invention may be substituted with a chemically synthesized base. Moreover, the site | part by which the polynucleotide based on this invention is substituted is not specifically limited, The protein which the base sequence after substitution has should just have a suitable property. That is, the protein encoded by the base sequence after substitution only needs to have chitinase activity. For example, such a polynucleotide includes a polynucleotide (SEQ ID NO: 6) encoding “LA-a1 protein” shown in Examples described later.
また本発明に係るポリヌクレオチドには、本発明に係るタンパク質をコードするポリヌクレオチド(例えば、配列番号4または5に示される塩基配列を有するポリヌクレオチド)、またはこれに相補的な塩基配列からなるポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つ、キチナーゼ活性を有するタンパク質をコードするポリヌクレオチドも含まれる。 The polynucleotide according to the present invention includes a polynucleotide encoding the protein according to the present invention (for example, a polynucleotide having the base sequence shown in SEQ ID NO: 4 or 5), or a polynucleotide comprising a base sequence complementary thereto. A polynucleotide that hybridizes with a nucleotide under stringent conditions and encodes a protein having chitinase activity is also included.
本明細書において、上記「ストリンジェントな条件」とは、少なくとも90%の同一性、好ましくは少なくとも95%の同一性、最も好ましくは少なくとも97%の同一性が配列間に存在するときにのみハイブリダイゼーションが起こることを意味する。具体的には、例えば、ハイブリダイゼーション溶液(50%ホルムアミド、5×SSC(150mMのNaCl、15mMのクエン酸三ナトリウム)、50mMのリン酸ナトリウム(pH7.6)、5×デンハート液、10%硫酸デキストラン、および20μg/mlの変性剪断サケ精子DNAを含む)中にて42℃で一晩インキュベーションした後、約65℃にて0.1×SSC中でフィルターを洗浄する条件を挙げることができる。 In the present specification, the above “stringent conditions” means that only when at least 90% identity, preferably at least 95% identity, most preferably at least 97% identity exists between sequences. It means that hybridization occurs. Specifically, for example, hybridization solution (50% formamide, 5 × SSC (150 mM NaCl, 15 mM trisodium citrate), 50 mM sodium phosphate (pH 7.6), 5 × Denhart solution, 10% sulfuric acid The conditions include washing the filter in 0.1 × SSC at about 65 ° C. after overnight incubation in dextran and 20 μg / ml denatured sheared salmon sperm DNA).
ハイブリダイゼーションは、Sambrookらの方法(Molecular Cloning, A Laboratory Manual, 3rd Ed., Cold Spring Harbor Laboratory(2001))のような周知の方法で行なうことができる。通常、温度が高いほど、塩濃度が低いほどストリンジェンシーは高くなり(ハイブリダイズし難くなる)、より相同性の高いポリヌクレオチドを取得することができる。 Hybridization can be performed by a known method such as Sambrook et al. (Molecular Cloning, A Laboratory Manual, 3rd Ed, Cold Spring Harbor Laboratory (2001)). Usually, the higher the temperature and the lower the salt concentration, the higher the stringency (harder to hybridize), and a polynucleotide with higher homology can be obtained.
塩基配列の同一性は、株式会社ゼネティックス製の解析ソフトGenetyxを用いて決定することができる。 The identity of the base sequence can be determined using analysis software Genetyx manufactured by Genetics Co., Ltd.
本発明に係るポリヌクレオチドの塩基配列は、従来公知の方法によって決定され得る。 The nucleotide sequence of the polynucleotide according to the present invention can be determined by a conventionally known method.
本発明に係るポリヌクレオチドは、本発明に係るタンパク質をコードするポリヌクレオチドのみからなるものであってもよいが、その他の塩基配列が付加されていてもいてもよい。付加される塩基配列としては、限定されないが、標識(例えば、ヒスチジンタグ、Mycタグ、およびFLAGタグ等)、融合タンパク質(例えば、GSTおよびMBP等)、プロモーター配列(例えば、酵母由来プロモーター配列、ファージ由来プロモーター配列、および大腸菌由来プロモーター配列等)、およびシグナル配列(例えば、小胞体移行シグナル配列、および分泌配列等)をコードする塩基配列等が挙げられる。これらの塩基配列が付加される部位は特に限定されるものではなく、翻訳されるタンパク質のN末端であっても、C末端でもあってもよい。 The polynucleotide according to the present invention may be composed only of the polynucleotide encoding the protein according to the present invention, but other base sequences may be added thereto. The base sequence to be added is not limited, but includes a label (for example, histidine tag, Myc tag, and FLAG tag), a fusion protein (for example, GST and MBP), a promoter sequence (for example, yeast-derived promoter sequence, phage) Derived promoter sequences, E. coli-derived promoter sequences, etc.), and base sequences encoding signal sequences (eg, endoplasmic reticulum translocation signal sequences, secretory sequences, etc.). The site to which these base sequences are added is not particularly limited, and may be the N-terminus or the C-terminus of the translated protein.
〔3.本発明に係るベクターおよび形質転換体〕
本発明に係るベクターは、本発明に係るポリヌクレオチドを含むものである。当該「本発明に係るポリヌクレオチド」については、上記「2.本発明に係るポリヌクレオチド」の項で説明したとおりであるので、ここでは説明を省略する。
[3. Vector and transformant according to the present invention]
The vector according to the present invention includes the polynucleotide according to the present invention. Since the “polynucleotide according to the present invention” is as described in the above-mentioned section “2. Polynucleotide according to the present invention”, the description thereof is omitted here.
本発明に係るベクターは、本発明に係るポリヌクレオチドを含むものであれば、その他の構成は特に限定されるものではない。本発明に係るベクターを構成するベースとなるベクターとしては、従来公知の種々のベクターを用いることができる。例えば、プラスミド、ファージ、またはコスミド等を用いることができ、ベクターが導入される宿主細胞や導入方法に応じて好適なベクターが適宜選択され得る。 As long as the vector according to the present invention includes the polynucleotide according to the present invention, other configurations are not particularly limited. Various conventionally known vectors can be used as a base vector constituting the vector according to the present invention. For example, a plasmid, phage, cosmid or the like can be used, and a suitable vector can be appropriately selected depending on the host cell into which the vector is introduced and the introduction method.
本発明に係るベクターとしてプラスミドベクターを用いる場合、例えば、pBR322、pBR325、pUC19、pUC119、pBluescript、pBluescriptSK、pBI系のベクター等が使用できる。 When a plasmid vector is used as the vector according to the present invention, for example, pBR322, pBR325, pUC19, pUC119, pBluescript, pBluescriptSK, pBI vectors, and the like can be used.
本発明に係るベクターを構築するには、本発明に係るポリヌクレオチドを分離および精製した後に、制限酵素処理等を用いて切断した当該ポリヌクレオチドの断片と、ベースとなるベクターを制限酵素で切断して得た直鎖ポリヌクレオチドとを結合閉鎖させることによって構築することができる。結合閉鎖する際には、ベクターおよび当該ポリヌクレオチドの性質に応じてDNAリガーゼ等を使用することができる。 To construct the vector according to the present invention, after separating and purifying the polynucleotide according to the present invention, the fragment of the polynucleotide cleaved using a restriction enzyme treatment or the like and the base vector are cleaved with a restriction enzyme. It can be constructed by binding and closing the linear polynucleotide obtained above. When closing the binding, DNA ligase or the like can be used depending on the nature of the vector and the polynucleotide.
本発明に係るベクターを宿主細胞に導入した後、ベクターのマーカー遺伝子の発現を指標としてスクリーニングして、本発明に係るポリヌクレオチドを含有する形質転換体を得ることができる。よって、本発明に係るベクターには薬剤耐性遺伝子等のマーカー遺伝子が含まれていることが好ましい。かかる薬剤耐性遺伝子の具体的な一例としては、例えば、ハイグロマイシン、ブレオマイシン、カナマイシン、ゲンタマイシン、クロラムフェニコール等に対する薬剤耐性遺伝子を挙げることができる。これにより、上記抗生物質を含む培地中で生育する細胞を選択することによって、形質転換された宿主細胞を容易に選別することができる。 After the vector according to the present invention is introduced into a host cell, a transformant containing the polynucleotide according to the present invention can be obtained by screening using the expression of the marker gene of the vector as an index. Therefore, the vector according to the present invention preferably contains a marker gene such as a drug resistance gene. Specific examples of such drug resistance genes include drug resistance genes for hygromycin, bleomycin, kanamycin, gentamicin, chloramphenicol and the like. Thereby, transformed host cells can be easily selected by selecting cells that grow in a medium containing the antibiotic.
本発明に係るベクターは、本発明に係るポリヌクレオチドを宿主細胞内で発現させるためのプロモーターをさらに有していてもよい。上記プロモーターは、本発明に係るポリヌクレオチドを宿主細胞内で発現させることが可能なプロモーターであれば特に限定されるものではなく、公知のプロモーターを好適に用いることができる。上記プロモーターは、本発明に係るポリヌクレオチドを発現し得るように連結されてベクター内に導入されていればよく、ベクターとしての具体的な構造は特に限定されるものではない。 The vector according to the present invention may further have a promoter for expressing the polynucleotide according to the present invention in a host cell. The promoter is not particularly limited as long as it is a promoter capable of expressing the polynucleotide according to the present invention in a host cell, and a known promoter can be preferably used. The promoter is not particularly limited as long as the promoter is linked so as to express the polynucleotide of the present invention and introduced into the vector.
本発明に係るベクターは、上記プロモーター、上記マーカー遺伝子、および上述のポリヌクレオチドに加えて、さらに他のDNAセグメントを含んでいてもよい。当該他のDNAセグメントは、特に限定されるものではなく、例えば、ターミネーター、エンハンサー、翻訳効率を高めるための塩基配列等を挙げることができる。 The vector according to the present invention may further contain other DNA segments in addition to the promoter, the marker gene, and the polynucleotide described above. The other DNA segment is not particularly limited, and examples thereof include a terminator, an enhancer, and a base sequence for improving translation efficiency.
また、本発明に係るベクターの増幅方法(生産方法)も特に限定されるものではなく、従来公知の方法を用いることができる。一般的には大腸菌を宿主細胞として当該大腸菌内でベクターを増幅させることができる。このとき、ベクターの種類に応じて、好ましい大腸菌の種類を選択することができる。 The vector amplification method (production method) according to the present invention is not particularly limited, and a conventionally known method can be used. In general, a vector can be amplified in E. coli using E. coli as a host cell. At this time, a preferred E. coli type can be selected according to the type of vector.
なお、本発明は、本発明に係るベクターで形質転換された形質転換体を包含する。本発明に係るベクターによって形質転換される宿主細胞としては、特に限定されないが、例えば、酵母、大腸菌(Escherichia coli)、昆虫細胞、植物細胞、哺乳類細胞等を利用することができる。 Note that the present invention includes a transformant transformed with the vector according to the present invention. The host cell transformed with the vector according to the present invention is not particularly limited. For example, yeast, Escherichia coli, insect cells, plant cells, mammalian cells and the like can be used.
上記宿主細胞に本発明に係るベクターを導入する方法としては、特に限定されるものではなく、例えば、宿主細胞がエシェリヒア属に属する微生物である場合は、カルシウムイオンの存在下で組換えDNAを導入する方法や、エレクトロポレーション法を用いる方法等の従来公知の方法が適用され得る。また、例えば、宿主細胞が植物細胞である場合は、例えば、アグロバクテリウム法、パーティクルガン法、ポリエチレングリコール法、エレクトロポレーション法等の従来公知の方法が適用され得る。 The method for introducing the vector according to the present invention into the host cell is not particularly limited. For example, when the host cell is a microorganism belonging to the genus Escherichia, the recombinant DNA is introduced in the presence of calcium ions. A conventionally known method such as a method of using an electroporation method or the like can be applied. For example, when the host cell is a plant cell, conventionally known methods such as the Agrobacterium method, the particle gun method, the polyethylene glycol method, and the electroporation method can be applied.
本発明に係るベクターが宿主細胞に導入されたか否かの確認は、従来公知のPCR法、サザンハイブリダイゼーション法、ノーザンハイブリダイゼーション法等によって確認することができる。また、本発明に係るベクターに含まれているポリヌクレオチドがコードするタンパク質の発現を、従来公知の免疫学的手法により測定することでも確認可能である。また、ポリヌクレオチドがコードするタンパク質が示す酵素活性(例えば、キチナーゼ活性、キトサナーゼ活性)を、従来公知の生化学的手法により測定することでも確認可能である。また、本発明に係るベクターにカナマイシン耐性やハイグロマイシン耐性などの薬剤耐性マーカー遺伝子が導入されている場合は、上記抗生物質を含む培地中で生育する細胞を選択することによって、形質転換された宿主細胞を容易に選別することができる。 Whether or not the vector according to the present invention has been introduced into the host cell can be confirmed by a conventionally known PCR method, Southern hybridization method, Northern hybridization method or the like. It can also be confirmed by measuring the expression of the protein encoded by the polynucleotide contained in the vector according to the present invention by a conventionally known immunological technique. It can also be confirmed by measuring the enzyme activity (for example, chitinase activity, chitosanase activity) exhibited by the protein encoded by the polynucleotide by a conventionally known biochemical technique. In addition, when a drug resistance marker gene such as kanamycin resistance or hygromycin resistance is introduced into the vector according to the present invention, a transformed host is selected by selecting cells that grow in a medium containing the antibiotic. Cells can be easily sorted.
このようにして得られた形質転換体は、本発明に係るタンパク質を発現しているので、当該タンパク質を調製するために用いることができる。 Since the transformant thus obtained expresses the protein according to the present invention, it can be used to prepare the protein.
また、上述した方法によってベクターが導入された植物細胞は、定法によって再分化させることにより、植物体に再生することができる。従って、本発明の形質転換体には、形質転換細胞から再生された形質転換植物体も含まれる。 Also, plant cells into which a vector has been introduced by the above-described method can be regenerated into a plant body by redifferentiation by a conventional method. Therefore, the transformant of the present invention includes a transformed plant regenerated from the transformed cell.
形質転換細胞から植物体の再生は、植物細胞の種類に応じて当業者に公知の方法で行なうことが可能である。得られた形質転換植物体は、本発明に係るタンパク質を発現しているので、耐虫性活性が付与された植物体となり得る。それゆえ、かかる形質転換植物体に対しては、殺虫剤等の農薬散布の作業を省くことができる。 Regeneration of plant bodies from transformed cells can be performed by methods known to those skilled in the art depending on the type of plant cells. Since the obtained transformed plant body expresses the protein according to the present invention, it can be a plant body to which insecticidal activity is imparted. Therefore, it is possible to omit the work of spraying agricultural chemicals such as insecticides on such transformed plants.
本発明に係るポリヌクレオチドがゲノム内に導入された形質転換植物体がいったん得られれば、当該形質転換植物体から有性生殖または無性生殖により子孫を得ることができる。また、形質転換植物体やその子孫あるいはクローンから繁殖材料(例えば、種子、プロトプラスト等)を得て、それらを基に目的の形質転換植物体を量産することも可能である。 Once a transformed plant into which the polynucleotide according to the present invention has been introduced into the genome is obtained, offspring can be obtained from the transformed plant by sexual reproduction or asexual reproduction. It is also possible to obtain propagation materials (for example, seeds, protoplasts, etc.) from the transformed plant body, its progeny or clones, and mass-produce the desired transformed plant body based on them.
形質転換に用いられる植物としては、特に限定されず、例えば、種々の単子葉植物、双子葉植物等の植物全般を用いることができる。例えば、単子葉植物としては、イネ科植物、ユリ科植物等を挙げることができる。また、双子葉植物としては、クワ科植物、アブラナ科植物、マメ科植物、ナス科植物、ウリ科植物、ヒルガオ科植物、バラ科植物、アオイ科植物等を挙げることができる。 The plant used for transformation is not particularly limited, and for example, various monocotyledonous plants, dicotyledonous plants and the like can be used. For example, examples of monocotyledonous plants include gramineous plants and liliaceous plants. Examples of the dicotyledonous plants include mulberry plants, cruciferous plants, legumes, eggplants, cucurbits, convolvulaceae, roses, mallows.
〔4.本発明に係る耐虫剤〕
本発明に係る耐虫剤は、本発明に係るタンパク質を有効成分として含有していればよい。上記「本発明に係るタンパク質」については、上記「1.本発明に係るタンパク質」の項で説明したとおりであるので、ここでは説明を省略する。本発明に係るタンパク質は、優れた殺虫性を有しているので、かかるタンパク質を有効成分として含有している耐虫剤は、殺虫性に優れた耐虫剤となり得る。
[4. Insecticide according to the present invention]
The insecticide according to the present invention only needs to contain the protein according to the present invention as an active ingredient. The “protein according to the present invention” is as described in the section “1. Protein according to the present invention”, and therefore, the description thereof is omitted here. Since the protein according to the present invention has excellent insecticidal properties, an insecticide containing such a protein as an active ingredient can be an insecticide having excellent insecticidal properties.
なお、本明細書において、「耐虫剤」とは、虫を死滅させる、虫を弱体化させる、または虫の成長を阻害するための組成物を意図している。なお、本明細書では、上記「虫を死滅させる、虫を弱体化させる、または虫の成長を阻害する」ことを、「虫を駆除する」と表現する場合がある。上記「虫」については、上記「1.本発明に係るタンパク質」の項で説明したとおりであるので、ここでは説明を省略する。 In the present specification, the term “insect-proofing agent” intends a composition for killing insects, weakening insects, or inhibiting insect growth. In the present specification, the above-mentioned “killing insects, weakening insects, or inhibiting insect growth” may be expressed as “extermination of insects”. The “insect” is as described in the section “1. Protein according to the present invention”, and the description thereof is omitted here.
本発明に係る耐虫剤は、有効成分として本発明に係るタンパク質を含有していれば、その含有量は特に限定されず、対象とする虫によって本発明に係るタンパク質の含有量は異なるが、一般的には、本発明に係る耐虫剤の総重量に対して、本発明に係るタンパク質の含有量が0.01重量%以上であればよく、0.05重量%以上であることが好ましく、0.1重量%以上であることがより好ましく、0.2重量%以上であることがさらに好ましく、0.5重量%以上であることが最も好ましい。このように、本発明に係るタンパク質によれば、少量であっても十分な耐虫性活性を発揮する。 As long as the insecticide according to the present invention contains the protein according to the present invention as an active ingredient, the content thereof is not particularly limited, and the content of the protein according to the present invention differs depending on the target insect, In general, the content of the protein according to the present invention may be 0.01% by weight or more, preferably 0.05% by weight or more, with respect to the total weight of the insect repellent according to the present invention. The content is more preferably 0.1% by weight or more, further preferably 0.2% by weight or more, and most preferably 0.5% by weight or more. Thus, according to the protein of the present invention, sufficient insect resistance activity is exhibited even in a small amount.
また、本発明にかかる耐虫剤は、必要に応じて、本発明に係るタンパク質の効果を阻害しない本発明に係るタンパク質以外の成分を適宜含んでいてもよい。例えば、この技術分野で通常用いられる、安定剤、増粘剤、増量剤、結合剤等がさらに添加されていてもよい。本発明に係る耐虫剤の形態は特に限定されるものではなく、液状、粉状、顆粒状、錠剤等の形態で用いられ得る。 In addition, the insecticide according to the present invention may appropriately contain components other than the protein according to the present invention that do not inhibit the effect of the protein according to the present invention, if necessary. For example, stabilizers, thickeners, extenders, binders and the like that are commonly used in this technical field may be further added. The form of the insecticide according to the present invention is not particularly limited, and may be used in the form of liquid, powder, granule, tablet or the like.
本発明に係る耐虫剤は、種々の単子葉植物、双子葉植物等の植物全般に対して、虫を駆除するために適用することができる。例えば、単子葉植物としては、イネ科植物、ユリ科植物等を挙げることができる。また、双子葉植物としては、クワ科植物、アブラナ科植物、マメ科植物、ナス科植物、ウリ科植物、ヒルガオ科植物、バラ科植物、アオイ科植物等を挙げることができる。 The insecticide according to the present invention can be applied to a variety of monocotyledonous plants, dicotyledonous plants and other general plants in order to combat insects. For example, examples of monocotyledonous plants include gramineous plants and liliaceous plants. Examples of the dicotyledonous plants include mulberry plants, cruciferous plants, legumes, eggplants, cucurbits, convolvulaceae, roses, mallows.
なお、上述した本発明の実施態様において、耐虫剤は、本発明に係るタンパク質を用いて虫を駆除する方法、または虫を駆除するための本発明に係るタンパク質の使用と読み替えることもできる。 In the above-described embodiment of the present invention, the insecticide can be read as a method for controlling insects using the protein according to the present invention, or the use of the protein according to the present invention for controlling insects.
本発明に係るタンパク質は、植物の乳液由来のタンパク質であることが好ましい。 The protein according to the present invention is preferably a protein derived from plant milk.
また、上記植物は、クワ科植物であることが好ましい。 The plant is preferably a mulberry plant.
本発明に係るポリヌクレオチドは、本発明に係るタンパク質をコードするポリヌクレオチドであることを特徴としている。 The polynucleotide according to the present invention is a polynucleotide encoding the protein according to the present invention.
また、本発明に係るポリヌクレオチドは、下記(I)~(IV)の何れかを特徴としている:
(I)配列番号4に示す塩基配列を有するポリヌクレオチド;
(II)配列番号4に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド;
(III)配列番号5に示す塩基配列を有するポリヌクレオチド;
(IV)配列番号5に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド。
The polynucleotide according to the present invention is characterized by any of the following (I) to (IV):
(I) a polynucleotide having the base sequence represented by SEQ ID NO: 4;
(II) a polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 4 under stringent conditions and encodes a protein having chitinase activity;
(III) a polynucleotide having the base sequence represented by SEQ ID NO: 5;
(IV) A polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 5 under stringent conditions and encodes a protein having chitinase activity.
本発明に係るベクターは、本発明に係るポリヌクレオチドを含んでいることを特徴としている。 The vector according to the present invention is characterized by including the polynucleotide according to the present invention.
本発明に係る形質転換体は、本発明に係るベクターで形質転換されたことを特徴としている。 The transformant according to the present invention is characterized by being transformed with the vector according to the present invention.
本発明に係る耐虫剤は、本発明に係るタンパク質を含有していることを特徴としている。 The insecticide according to the present invention is characterized by containing the protein according to the present invention.
本発明は上述した各実施形態に限定されるものではなく、請求項に示した範囲で種々の変更が可能であり、異なる実施形態にそれぞれ開示された技術的手段を適宜組み合わせて得られる実施形態についても本発明の技術的範囲に含まれる。 The present invention is not limited to the above-described embodiments, and various modifications are possible within the scope shown in the claims, and embodiments obtained by appropriately combining technical means disclosed in different embodiments. Is also included in the technical scope of the present invention.
以下、本発明を実施例により具体的に説明するが、本発明は実施例によって限定されるものではない。 Hereinafter, the present invention will be specifically described with reference to examples, but the present invention is not limited to the examples.
〔実施例1:新規タンパク質の単離精製および機能解析〕
クワの乳液の可溶画分から2種の新規タンパク質の単離精製を行ない、これら新規タンパク質の機能解析を行った。
[Example 1: Isolation and purification of novel protein and functional analysis]
Two novel proteins were isolated and purified from the soluble fraction of mulberry milk, and the functions of these novel proteins were analyzed.
(1.LAタンパク質の精製)
クワ(Morus alba L.)(みなみさかり品種)の葉柄を切断し、切断面から漏出する乳液を採取した。得られた乳液と、0.1%(v/v)βメルカプトエタノールを含むバッファA(100mM リン酸カリウム、10mM EDTA、pH6.7)とを、混合比が1:1となるように急速に混合し、液体窒素を用いて凍結し、-80℃にて保存した。
(1. Purification of LA protein)
Mulberry (Morus alba L.) (Minamisakari varieties) petioles were cut, and the emulsion leaked from the cut surface was collected. The obtained emulsion and buffer A (100 mM potassium phosphate, 10 mM EDTA, pH 6.7) containing 0.1% (v / v) β-mercaptoethanol were rapidly added so that the mixing ratio was 1: 1. Mix, freeze with liquid nitrogen and store at -80 ° C.
次いで、6mlの乳液/バッファA混合液を、バッファAで4倍に希釈し、18000gで30分間、遠心分離を行った。得られた上清に対して、まず、30%飽和硫酸アンモニウムを加えて不純物(の一部)を沈殿により除去し、その上清に、さらに硫酸アンモニウムを加えて80%飽和とし、目的タンパク質を含む画分を沈殿により回収した。沈殿したタンパク質を、4mlのバッファB(10mM リン酸カルシウム、1mM EDTA、pH6.0)に溶解した。かかる溶液を、カットオフ分子量が25kDaの透析膜(Spectra/Por 7; Spectrum Laboratories Inc., Rancho Dominguez, CA, USA)を用いて、バッファBに対して一晩、透析を行った。透析後の試料は、50mlになるように希釈した。
Next, 6 ml of the emulsion / buffer A mixture was diluted 4-fold with buffer A and centrifuged at 18000 g for 30 minutes. First, 30% saturated ammonium sulfate is added to the resulting supernatant to remove impurities (a part of it) by precipitation, and ammonium sulfate is further added to the supernatant to make it 80% saturated. Minutes were collected by precipitation. The precipitated protein was dissolved in 4 ml of buffer B (10 mM calcium phosphate, 1 mM EDTA, pH 6.0). The solution was dialyzed overnight against buffer B using a dialysis membrane with a cutoff molecular weight of 25 kDa (Spectra /
クワ乳液の可溶画分(クワ乳液(原液)0.025μlに相当)を、SDS-PAGE法によって解析した結果を図1に示す。図1に示したように、クワ乳液の可溶画分には、分子量がおよそ50kDaおよび46kDaの2種のタンパク質が豊富に含まれていた。これらの2種のタンパク質を、「LA(Latex-abundant)タンパク質」と命名した。そして、分子量がおよそ50kDaのタンパク質を、LA-aタンパク質と命名し、分子量がおよそ46kDaのタンパク質を、LA-bタンパク質と命名した。 FIG. 1 shows the result of analyzing the soluble fraction of mulberry milk (corresponding to 0.025 μl of mulberry milk (stock solution)) by the SDS-PAGE method. As shown in FIG. 1, the soluble fraction of mulberry milk was rich in two proteins with molecular weights of approximately 50 kDa and 46 kDa. These two kinds of proteins were named “LA (Latex-abundant) proteins”. A protein having a molecular weight of approximately 50 kDa was named LA-a protein, and a protein having a molecular weight of approximately 46 kDa was named LA-b protein.
LA-aタンパク質およびLA-bタンパク質を精製するために、まず、バッファBで平衡化した陽イオン交換カラム(CM-Cellulofine C-200;Seikagaku Kogyo KK, Tokyo, Japan;26 mm i.d. × 100 mm)に、透析後の試料をロードし、0.2M KClを含有しているバッファBを用いて、流速1.0ml/分で溶出することによって、LA-aタンパク質およびLa-bタンパク質を含有しているタンパク質画分を得た。 To purify LA-a protein and LA-b protein, first, cation exchange column equilibrated with buffer B (CM-CellulofineuloC-200; Seikagaku Kogyo KK, Tokyo, Japan; 26 mm id × 100 mm) Load the sample after dialysis and elute at a flow rate of 1.0 ml / min using buffer B containing 0.2 M KCl to contain LA-a protein and La-b protein. The protein fraction was obtained.
次いで、溶出されたタンパク質溶液に30%飽和硫酸アンモニウムを加え、上清を疎水クロマトグラフィーに供した。疎水クロマトグラフィーには、30%飽和硫酸アンモニウムを含むバッファBで平衡化したHiLoad 16/10 phenyl sepharose HPカラム(16 mm i.d. × 100 mm; GE healthcare, Piscataway, NJ, USA)を用い、溶出は、30%飽和硫酸アンモニウムから0%飽和硫酸アンモニウムへの直線的な濃度勾配により、流速2ml/分で行った。疎水クロマトグラフィーの結果のクロマトグラムを図2の(a)に示す。かかる方法によって、LA-aタンパク質の精製標品を得た。 Next, 30% saturated ammonium sulfate was added to the eluted protein solution, and the supernatant was subjected to hydrophobic chromatography. For hydrophobic chromatography, a HiLoad 16/10 phenyl sepharose HP column (16 mm id × 100 mm; GE healthcare, Piscataway, NJ, USA) equilibrated with buffer B containing 30% saturated ammonium sulfate was used. A linear concentration gradient from% saturated ammonium sulfate to 0% saturated ammonium sulfate was performed at a flow rate of 2 ml / min. The chromatogram of the result of hydrophobic chromatography is shown in FIG. By this method, a purified preparation of LA-a protein was obtained.
疎水クロマトグラフィー後のLA-bタンパク質を含有している画分は、さらに、PD10カラム(GE healthcare)および10DGカラム(Bio-Rad, Hercules, CA, USA)を用いて、ゲル濾過クロマトグラフィーを2回行なうことによって、脱塩し、バッファBに置換した。 The fraction containing LA-b protein after hydrophobic chromatography was further subjected to gel filtration chromatography using a PD10 column (GE healthcare) and 10DG column (Bio-Rad, Hercules, CA, USA). Repeatedly desalted and replaced with buffer B.
ゲル濾過クロマトグラフィー後の試料は、さらに、陽イオンクロマトグラフィーに供することによって、LA-bタンパク質の精製標品を得た。なお、陽イオンクロマトグラフィーには、UNOS1 cationexchangeカラム(Bio-Rad)を用い、バッファBにおける0~0.5M NaClの直線的な濃度勾配により、流速3.0ml/分で溶出した。陽イオン交換クロマトグラフィーの結果のクロマトグラムを図2の(b)に示す。 The sample after gel filtration chromatography was further subjected to cation chromatography to obtain a purified preparation of LA-b protein. For cation chromatography, a UNOS1 cation exchange column (Bio-Rad) was used, and elution was performed at a flow rate of 3.0 ml / min with a linear concentration gradient of 0 to 0.5 M NaCl in buffer B. A chromatogram of the result of cation exchange chromatography is shown in FIG.
3mlのクワ乳液から、5.8mgのLA-aタンパク質および1.1mgのLA-bタンパク質をそれぞれ精製することができた。 5.8 mg LA-a protein and 1.1 mg LA-b protein could be purified from 3 ml mulberry milk, respectively.
得られたLA-aタンパク質およびLA-bタンパク質(それぞれ1μg)の純度を、SDS-PAGE法によって解析した。なお、タンパク質は、銀染色によって検出した。その結果、図3に示したように、SDS-PAGE法によって単一のバンドのみが検出されたことから、LA-aタンパク質およびLA-bタンパク質を高純度で精製することができたことを確認した。 The purity of the obtained LA-a protein and LA-b protein (each 1 μg) was analyzed by SDS-PAGE. The protein was detected by silver staining. As a result, as shown in FIG. 3, since only a single band was detected by the SDS-PAGE method, it was confirmed that the LA-a protein and the LA-b protein could be purified with high purity. did.
LA-aタンパク質およびLA-bタンパク質の精製標品は、それぞれ、Microcon YM-10 (Millipore Corp., Bedford, MA, USA)を用いて、1.0mg/mlの濃度になるように濃縮し、液体窒素を用いて凍結し、-80℃にて保存した。 The purified preparations of LA-a protein and LA-b protein were concentrated to a concentration of 1.0 mg / ml using Microcon YM-10 (Millipore Corp., Bedford, MA, USA), respectively. It was frozen using liquid nitrogen and stored at −80 ° C.
なお、上述した全ての精製工程は、4℃で行なった。全てのクロマトグラフィー工程は、BioLogic Duo-Flow chromatography system(Bio-Rad)を用いて行った。 All the purification steps described above were performed at 4 ° C. All chromatographic steps were performed using a BioLogic Duo-Flow chromatography system (Bio-Rad).
得られたLAタンパク質の濃度は、以下の式(1)に従って決定した(Kalckar DM: J Biol Chem 1947, 167:461-475を参照)。
タンパク質の濃度(mg/ml)=1.45A280-0.74A260 … (1)。
The concentration of the obtained LA protein was determined according to the following formula (1) (see Kalckar DM: J Biol Chem 1947, 167: 461-475).
Protein concentration (mg / ml) = 1.45A 280 -0.74A 260 (1).
(2.ウエスタンブロッティング)
従来公知の手法によって、精製したLA-aタンパク質に対するラットポリクローナル抗体を作製し、LA-aタンパク質およびLA-bタンパク質について、ウエスタンブロッティングを行った。
(2. Western blotting)
A rat polyclonal antibody against the purified LA-a protein was prepared by a conventionally known technique, and Western blotting was performed on the LA-a protein and the LA-b protein.
具体的には、タンパク質試料をSDS-PAGE法によって分離し、Kyhse-Andersonのバッファシステムを用いて、PVDF膜に電気的に転写した(Kyhse-Andersen J: J Biochem Biophys Methods 1984, 10:203-209を参照)。タンパク質を転写した膜を、抗LA-aポリクローナル抗体と反応させ、その後、アルカリフォスファターゼを結合させた抗ラット抗体と反応させた(Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT: Current Protocols in Protein Science John Wiley & Sons 1995を参照)。次いで、5-ブロモ-4-クロロ-3-インドリルリン酸塩(BCIP)とニトロブルーテトラゾリウム(NBT)との混合液を用いて、膜を発色させた。 Specifically, protein samples were separated by SDS-PAGE and electrically transferred to PVDF membrane using a Kyhse-Anderson buffer system (Kyhse-Andersen J: J Biochem Biophys Methods 1984, 10: 203- 209). The protein-transferred membrane was reacted with an anti-LA-a polyclonal antibody, and then reacted with an anti-rat antibody conjugated with alkaline phosphatase (Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT: Current Protocols in Protein Science John Wiley & Sons 1995). The film was then developed with a mixture of 5-bromo-4-chloro-3-indolyl phosphate (BCIP) and nitroblue tetrazolium (NBT).
ウエスタンブロッティングの結果を図4に示す。図4に示したように、抗LA-aタンパク質抗体は、LA-aタンパク質だけでなく、LA-bタンパク質も認識した。この結果は、LA-aタンパク質とLA-bタンパク質とは、分子量は互いに異なるが、類似のタンパク質であることを示している。 Figure 4 shows the results of Western blotting. As shown in FIG. 4, the anti-LA-a protein antibody recognized not only LA-a protein but also LA-b protein. This result indicates that LA-a protein and LA-b protein are similar proteins, although the molecular weights are different from each other.
(3.N末端のアミノ酸配列の解析)
Coliganらの方法(Current Protocols in Protein Science John Wiley & Sons 1995を参照)に従って、ヨードアセトアミドを用いて処理することによって、タンパク質のシステイン残基を、アルキル化した。その後、C18逆相カラム(4.6 × 150 mm; TSK gel ODS-100S; Toso, Tokyo, Japan)を用いて、0.1%トリフルオロ酢酸における5~50%アセトニトリルの直線的な濃度勾配により、流速1.0ml/分で溶出した。溶出したタンパク質を、蒸発によって濃縮し、自動プロテインシークエンサーPPSQ-21A(Shimadzu, Japan)を用いてN末端のアミノ酸配列を解析した。
(3. Analysis of N-terminal amino acid sequence)
Protein cysteine residues were alkylated by treatment with iodoacetamide according to the method of Coligan et al. (See Current Protocols in Protein Science John Wiley & Sons 1995). Then, using a C18 reverse phase column (4.6 × 150 mm; TSK gel ODS-100S; Toso, Tokyo, Japan), the flow rate was changed by a linear concentration gradient of 5 to 50% acetonitrile in 0.1% trifluoroacetic acid. Elute at 1.0 ml / min. The eluted protein was concentrated by evaporation, and the N-terminal amino acid sequence was analyzed using an automatic protein sequencer PPSQ-21A (Shimadzu, Japan).
その結果、LA-aタンパク質とLA-bタンパク質とは、N末端側のアミノ酸配列が類似しており、ともに、ヘベインドメインを有していることが明らかになった。 As a result, it was revealed that the LA-a protein and the LA-b protein have similar amino acid sequences on the N-terminal side and both have a hevein domain.
(4.グリコシル化の解析)
LA-aタンパク質およびLA-bタンパク質(1レーンあたり3μg)を、SDS-PAGE法によって分離した。まず、グリコシル化されたタンパク質を検出するために、Pro-Q Emerald 300(Invitrogen, Carlsbad, CA, USA)を用いてゲルを染色し、その後、全てのタンパク質を検出するために、SYPRO Ruby stain(Invitrogen, Carlsbad, CA, USA)を用いてゲルを染色した。コンロトールとして、CandyCane glycoprotein molecular weight standards(Invitrogen)を用いた。
(4. Analysis of glycosylation)
LA-a protein and LA-b protein (3 μg per lane) were separated by SDS-PAGE. First, to detect glycosylated protein, the gel was stained with Pro-Q Emerald 300 (Invitrogen, Carlsbad, CA, USA), and then SYPRO Ruby stain ( Invitrogen, Carlsbad, CA, USA) was used to stain the gel. As a control, CandyCane glycoprotein molecular weight standards (Invitrogen) were used.
結果を図5の(a)に示す。図5の(a)中、アスタリスクを付した数字は、糖タンパク質を指している。Pro-Q Emerald 300による染色結果から、LA-aタンパク質およびLA-bタンパク質がグリコシル化されていることが明らかになった。
The result is shown in FIG. In FIG. 5 (a), the numbers with asterisks indicate glycoproteins. Staining results with
レクチンブロットのために、タンパク質試料をSDS-PAGE法によって分離し、PVDF膜に電気的に転写した。タンパク質を転写した膜を、ビオチン化したRCA120(Vector Laboratories, Burlingame, CA, USA)と反応させ、その後、アルカリフォスファターゼを結合させたストレプトアビジンと反応させた。次いで、BCIPとNBTとの混合液を用いて、膜を発色させた。他のレクチン(ConA、DBA、LCA、PHA-E4、PNA、UEQ-I、WGA、ABA、DSA、Lotus、MAM、PHA-L4、SBA、およびSSA)についても同様の実験を行った。なお、RCA120以外のレクチンは、生化学工業株式会社から購入した。 For lectin blotting, protein samples were separated by SDS-PAGE and electrically transferred to a PVDF membrane. The protein-transferred membrane was reacted with biotinylated RCA120 (Vector (Laboratories, Burlingame, CA, USA), and then reacted with streptavidin to which alkaline phosphatase was bound. Next, the film was developed using a mixture of BCIP and NBT. Similar experiments were performed with other lectins (ConA, DBA, LCA, PHA-E4, PNA, UEQ-I, WGA, ABA, DSA, Lotus, MAM, PHA-L4, SBA, and SSA). In addition, lectins other than RCA120 were purchased from Seikagaku Corporation.
結果を図5の(b)に示す。LA-aタンパク質およびLA-bタンパク質は、特異的なレクチンであるCA120と強く反応した。 The result is shown in FIG. LA-a and LA-b proteins reacted strongly with the specific lectin CA120.
以上の結果から、LA-aタンパク質およびLA-bタンパク質は糖タンパク質であることが確認された。 From the above results, it was confirmed that the LA-a protein and LA-b protein are glycoproteins.
(5.キチナーゼアッセイおよびキトサナーゼアッセイ)
(キチナーゼ活性の測定方法)
酵素反応を10分から2時間に延長した以外は、Mayerらの方法(Planta 1996, 200:289-295を参照)に従って、基質として色素標識キチンCMchitin-RBV(Loewe Biochemica, Munchen, Germany)を用いて、比色分析によるキチナーゼアッセイを行った。バッファとして、0.1M クエン酸-Na2HPO4バッファ(pH5~8)を用いた。加水分解されたキチンを、回収し、550nmでの吸光度によって測定した。キチナーゼ活性を、「Δ550nm g protein-1 min-1」として表した。
(5. Chitinase assay and chitosanase assay)
(Measurement method of chitinase activity)
Except for extending the enzyme reaction from 10 minutes to 2 hours, using the dye-labeled chitin CMchitin-RBV (Loewe Biochemica, Munchen, Germany) as a substrate according to the method of Mayer et al. (See Planta 1996, 200: 289-295) A chitinase assay by colorimetry was performed. As a buffer, 0.1 M citrate-Na 2 HPO 4 buffer (
なお、上記単位「Δ550nm g protein-1 min-1」の「Δ550nm」とは、反応前後で550nmの吸収がどれだけ変化したかを表している。キチン修飾物のcarboxymethyl(CM) chitin(キチン自体は不溶性なので、化学修飾によりコロイド化する)を、RBV(550nmに吸収を有する色素)で標識したものが、上記CM-chitin-RBVであり、このRBVが、どれだけ可溶化したか(つまり、キチンが共にどれだけ可溶化したか)をもって、キチン分解活性としている。 Note that “Δ550 nm” in the unit “Δ550 nm g protein −1 min −1 ” represents how much the absorption at 550 nm has changed before and after the reaction. CM-chitin-RBV is a product of the chitin modified carboxymethyl (CM) chitin (which is colloidalized by chemical modification since it is insoluble) and labeled with RBV (a dye having absorption at 550 nm). The amount of RBV solubilized (that is, how much chitin has been solubilized together) is regarded as chitinolytic activity.
(キトサナーゼ活性の測定方法)
酵素反応を30分から2時間に延長した以外は、Osswaldらの方法(Anal Biochem 1992, 204:40-46を参照)に従って、基質として可溶性キトサン(Chitosan, low molecular weight; Sigma-Aldrich, MO, USA)を用いて、蛍光分析によるキトサナーゼアッセイを行った。バッファとして、0.1M クエン酸-Na2HPO4バッファ(pH3~7)を用いた。なお、上記「可溶性キトサン」とは、不溶性であるキチンを脱アセチル化することにより可溶化した化合物である。
(Measurement method of chitosanase activity)
Soluble chitosan (Chitosan, low molecular weight; Sigma-Aldrich, MO, USA) as a substrate according to the method of Osswald et al. (See Anal Biochem 1992, 204: 40-46) except that the enzymatic reaction was extended from 30 minutes to 2 hours. ) Was used to perform a chitosanase assay by fluorescence analysis. As a buffer, 0.1 M citrate-Na 2 HPO 4 buffer (
Osswaldらの方法に記載されているように、完全反応混合物からなるコントロールを、酵素の添加後に直ちに停止した。反応生成物であるグルコサミン(GlcN)を回収し、フルオレスアミン(Fluka, Buchs, Switzerland)で標識し、蛍光分析的に観察した(励起:395nm;発光:493nm)。アッセイと同じ条件下で作成したGlcN標準曲線を用いて計算したGlcNの量に基づいて、キトサナーゼ活性を算出した。キトサナーゼ活性は、単位「μmol GlcN g protein-1 min-1」で表した。上記単位「μmol GlcN g protein-1 min-1」は、1gのタンパク質が1分間にキトサンから生成したグルコサミンの量(μmol)を表している。 As described in the method of Osswald et al., The control consisting of the complete reaction mixture was stopped immediately after the addition of the enzyme. The reaction product glucosamine (GlcN) was recovered, labeled with fluoresamine (Fluka, Buchs, Switzerland) and observed fluorometrically (excitation: 395 nm; emission: 493 nm). Chitosanase activity was calculated based on the amount of GlcN calculated using a GlcN standard curve generated under the same conditions as the assay. The chitosanase activity was expressed in units of “μmol GlcN g protein −1 min −1 ”. The unit “μmol GlcN g protein −1 min −1 ” represents the amount (μmol) of glucosamine produced from chitosan by 1 g of protein per minute.
図6は、LA-aタンパク質およびLA-bタンパク質のキチナーゼ活性およびキトサナーゼ活性を測定した結果を表す図であり、(a)はキチナーゼ活性の測定結果を表し、(b)はキトサナーゼ活性の測定結果を表している。 FIG. 6 is a diagram showing the results of measuring the chitinase activity and chitosanase activity of LA-a protein and LA-b protein, (a) showing the measurement result of chitinase activity, and (b) showing the measurement result of chitosanase activity. Represents.
図6の(a)に示すように、LA-aタンパク質およびLA-bタンパク質は、キチナーゼ活性を有していた。また、LA-aタンパク質およびLA-bタンパク質のキチナーゼ活性は、pH5で最大値を示した。
As shown in FIG. 6 (a), the LA-a protein and LA-b protein had chitinase activity. The chitinase activity of LA-a protein and LA-b protein showed the maximum value at
図6の(b)に示すように、LA-aタンパク質およびLA-bタンパク質は、キトサナーゼ活性を有していた。また、LA-aタンパク質およびLA-bタンパク質のキトサナーゼ活性は、pH5で最大値を示した。
As shown in FIG. 6 (b), LA-a protein and LA-b protein had chitosanase activity. The chitosanase activity of LA-a protein and LA-b protein showed the maximum value at
〔実施例2:殺虫性の測定〕
Drosophila melanogaster(Canton-S系統)を、標準酵母寒天培地上で、25℃にて飼育した。LA-aタンパク質およびLA-bタンパク質の殺虫性を試験するために、200mgのFormula 4-24 instant Drosophila medium (Carolina Biological Supply, Burlington NC, USA)を含むバイアルに、15匹の2齢幼虫を入れ、餌として、0.1%(w/w)のLAタンパク質と窒素源として10mgのBacto Yeast Extract(Difco, Detroit, MI, USA)とを含む0.8mlのPBSを与えて6日間飼育した。また、コントロール群には、LAタンパク質の代わりに同じ量のウシ血清アルブミン(BSA)を含んでいる以外は上述した餌と同じ餌を与えるか、LAタンパク質の代わりのタンパク質を含んでいない以外は上述した餌と同じ餌を与えた。バイアルは、25℃でインキュベートした。各試験群につき、3つのバイアルを用意して実験を行った。
・LA-aタンパク質投与群:0.1%(w/w)LA-aタンパク質を含む
・LA-bタンパク質投与群:0.1%(w/w)LA-bタンパク質を含む
・コントロール群1:LAタンパク質の代わりに0.1%(w/w)BSAを含む
・コントロール群2:LAタンパク質の代わりのタンパク質を含まない。
[Example 2: Measurement of insecticidal properties]
Drosophila melanogaster (Canton-S strain) was bred at 25 ° C. on a standard yeast agar medium. To test the insecticidal properties of LA-a and LA-b proteins, 15 second-instar larvae were placed in a vial containing 200 mg of Formula 4-24 instant Drosophila medium (Carolina Biological Supply, Burlington NC, USA). The rats were fed with 0.8 ml of PBS containing 0.1% (w / w) LA protein and 10 mg of Bacto Yeast Extract (Difco, Detroit, MI, USA) as a nitrogen source for 6 days. In addition, the control group is given the same diet as that described above except that it contains the same amount of bovine serum albumin (BSA) instead of the LA protein, or the control group described above except that it does not contain the protein instead of the LA protein. The same bait was given. The vial was incubated at 25 ° C. For each test group, three vials were prepared for the experiment.
LA-a protein administration group: 0.1% (w / w) containing LA-a protein LA-b protein administration group: containing 0.1% (w / w) LA-b protein Control group 1 : Contains 0.1% (w / w) BSA instead of LA protein. Control group 2: Does not contain protein instead of LA protein.
図7は、LA-aタンパク質およびLA-bタンパク質がショウジョウバエの発育に及ぼす影響を示す図であり、(a)はLA-aタンパク質等を与えたショウジョウバエの蛹の数を表し、15匹の幼虫にLA-aタンパク質等を与え、そのうち何匹が6日後に蛹になったかを示している。(b)はLA-aタンパク質等を与えて6日後のショウジョウバエの生死と発育段階を表し、15匹の幼虫に餌を与え、6日後に何匹が蛹になったか、幼虫のまま生存しているか、死亡したかを示している。図7の(a)および(b)のグラフに示す値は、3つのバイアルの平均値±標準偏差として示した。また、グラフ中の「No protein」は、コントロール群2を表し、「BSA」はコントロール群1を表し、「LA-a」は、LA-aタンパク質投与群を表し、「LA-b」は、LA-bタンパク質投与群を表している。
FIG. 7 is a diagram showing the influence of LA-a protein and LA-b protein on the development of Drosophila. (A) shows the number of Drosophila pupae given LA-a protein and the like, and 15 larvae LA-a protein and the like were given to the animals, and how many of them became pupae after 6 days. (B) shows life and death and developmental stage of
図7の(a)に示すように、コントロール群1およびコントロール群2では、ほとんどの幼虫が蛹化したのに対し、LA-aタンパク質投与群またはLA-bタンパク質投与群では、幼虫の生育の遅滞が認められた。tukey検定の結果、3、4、5および6日目のいずれにおいても、コントロール群1(またはコントロール群2)およびLA-aタンパク質投与群の間には有意差があり(p<5%)、コントロール群1(またはコントロール群2)およびLA-bタンパク質投与群の間にも有意差があった(p<5%)。
As shown in FIG. 7 (a), most larvae hatched in the
さらに、図7の(b)に示すように、LA-aタンパク質投与群では、6日間飼育後に80%の幼虫が死亡し、LA-bタンパク質投与群では、6日間飼育後に40%の幼虫が死亡した。tukey検定の結果、蛹(Pupa)、生存している幼虫(Larva(live))および死亡した幼虫(Larva(dead))のいずれにおいても、コントロール群1(またはコントロール群2)、LA-aタンパク質投与群およびLA-bタンパク質投与群の3群間には、有意差があった(p<5%)。 Furthermore, as shown in FIG. 7 (b), in the LA-a protein administration group, 80% of larvae died after 6 days of breeding, and in the LA-b protein administration group, 40% of larvae after 6 days of breeding. Died. As a result of tukey test, control group 1 (or control group 2), LA-a protein in any of pupa (Pupa), living larvae (Larva (live)) and dead larvae (Larva (dead)) There was a significant difference (p <5%) between the three groups: the administration group and the LA-b protein administration group.
これらの結果から、LA-aタンパク質およびLA-bタンパク質は、昆虫に対する強い生育阻害活性と殺虫性を有していることが明らかになった。LA-aタンパク質またはLA-bタンパク質は、共にキチナーゼ活性を有していることから、LA-aタンパク質およびLA-bタンパク質が、ショウジョウバエの幼虫の体または消化菅表面のキチン質を加水分解した結果、ショウジョウバエの幼虫の生育が阻害され、幼虫が死亡したと考えられた。 From these results, it was revealed that LA-a protein and LA-b protein have strong growth inhibitory activity and insecticidal activity against insects. Since both LA-a protein and LA-b protein have chitinase activity, LA-a protein and LA-b protein hydrolyze chitin on the body of Drosophila larvae or the surface of digestive sputum. It was thought that the growth of Drosophila larvae was inhibited and the larvae died.
なお、クワ乳液由来のタンパク質であるMLX56は、キチナーゼ活性を有さず、また、MLX56を数種の鱗翅目昆虫の幼虫に摂取させると、生育阻害を示すが殺虫性を示さないことが報告されている(特許文献1および非特許文献3を参照)。このことから、LA-aタンパク質およびLA-bタンパク質は、クワ乳液由来のタンパク質であるMLX56とは全く異なる機能を有する新規タンパク質であることが確認された。
Note that MLX56, a protein derived from mulberry milk, has no chitinase activity, and when MLX56 is ingested by several larvae of lepidopterous insects, it has been reported to show growth inhibition but not insecticidal properties. (See
〔実施例3:アミノ酸配列および塩基配列の決定〕
クワ乳液由来のLA-aタンパク質およびLA-bタンパク質について、アミノ酸配列および塩基配列を決定した。
[Example 3: Determination of amino acid sequence and nucleotide sequence]
The amino acid sequence and nucleotide sequence of LA-a protein and LA-b protein derived from mulberry milk were determined.
まず、LA-aタンパク質およびLA-bタンパク質をコードするポリヌクレオチドの塩基配列を決定した。具体的には、常法に従い、クワ乳液よりmRNAを抽出、精製し、これをGS-FLX DNAシーケンサー(Roche社製)を用いてmRNA-seq解析を行った。得られたESTデータベースより、配列番号4、5および6に示す塩基配列を見出した。これらをLA-a、bとした根拠は、後述したとおりである。LA-aタンパク質およびLA-bタンパク質を大腸菌で発現させるためのクローニングは、Superscript III First strand Synthesis Supermix(Invitrogen社製)によるmRNAからの逆転写、およびコーディング領域に基づいて作製した以下の特異的プライマーを用いたPCRによる:
CTACAATAAGCGGCTGTACTGCC(配列番号7)
RRTGAGCCACARTGTGGAAGGGATGCAG(配列番号8)(但し、配列番号8において、Rは、AまたはGである。)。
First, the nucleotide sequences of polynucleotides encoding LA-a protein and LA-b protein were determined. Specifically, mRNA was extracted and purified from mulberry milk according to a conventional method, and mRNA-seq analysis was performed on this using a GS-FLX DNA sequencer (Roche). From the obtained EST database, the nucleotide sequences shown in SEQ ID NOs: 4, 5 and 6 were found. The reason why these are LA-a and b is as described later. Cloning to express the LA-a protein and LA-b protein in E. coli was performed by reverse transcription from mRNA by Superscript III First strand Synthesis Supermix (Invitrogen) and the following specific primers prepared based on the coding region. By PCR using:
CTACAAATAAGCGGCTGTACTGCC (SEQ ID NO: 7)
RRTGAGCCACARTTGTGGAAGGGATGCAG (SEQ ID NO: 8) (wherein, R is A or G in SEQ ID NO: 8).
その結果、クワ乳液から単離したLA-aタンパク質には、2つのアイソフォームが含まれていることが明らかになった。そこで、配列番号4に示す塩基配列を有するポリヌクレオチドがコードするタンパク質を「LA-a2タンパク質」と命名し、配列番号6に示す塩基配列を有するポリヌクレオチドがコードするタンパク質を「LA-a1タンパク質」と命名した。また、LA-bタンパク質は、配列番号5に示す塩基配列を有するポリヌクレオチドがコードするタンパク質であることが明らかになった。 As a result, it was revealed that LA-a protein isolated from mulberry milk contains two isoforms. Therefore, the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4 is named “LA-a2 protein”, and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 is “LA-a1 protein”. Named. Further, it was revealed that the LA-b protein is a protein encoded by a polynucleotide having the base sequence shown in SEQ ID NO: 5.
なお、
・上記「3.N末端のアミノ酸配列の解析」の項で説明した、エドマン解析により得たN末端ヘベインドメインを有すること、および
・上記抗LA-a抗体が、大腸菌で発現させたこれらcDNAのタンパク質産物に反応すること(データは示さない)等から、得られたcDNAが、LA-aタンパク質またはLA-bタンパク質をコードしていると結論付けた。
In addition,
-Having the N-terminal hevein domain obtained by Edman analysis, as described in the section "3. Analysis of amino acid sequence at N-terminal" above, and-these cDNAs in which the anti-LA-a antibody is expressed in Escherichia coli It was concluded that the obtained cDNA encodes LA-a protein or LA-b protein, for example, by reacting with the protein product (data not shown).
また、
・配列番号4に示す塩基配列を有するポリヌクレオチドがコードするタンパク質と、配列番号6に示す塩基配列を有するポリヌクレオチドがコードするタンパク質とは、推定分子量が互いにほぼ同じであり、SDS-PAGEでは区別不可能と考えられたこと、および
・配列番号5に示す塩基配列を有するポリヌクレオチドがコードするタンパク質は、これらより小さいこと
から、配列番号4に示す塩基配列を有するポリヌクレオチドがコードするタンパク質と、配列番号6に示す塩基配列を有するポリヌクレオチドがコードするタンパク質とを、「LA-aタンパク質」とし、配列番号5に示す塩基配列を有するポリヌクレオチドがコードするタンパク質を、「LA-bタンパク質」と結論付けた。これら3つのタンパク質のアミノ酸配列からの推定分子量が、SDS-PAGEの泳動度からの推定分子量より小さいのは、翻訳後に糖鎖修飾されたためであると考えられた。
Also,
-The protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4 and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 have almost the same estimated molecular weight, and are distinguished by SDS-PAGE. Since the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 5 is smaller than these, the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 4, The protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 6 is referred to as “LA-a protein”, and the protein encoded by the polynucleotide having the base sequence shown in SEQ ID NO: 5 is referred to as “LA-b protein”. I concluded. The reason why the molecular weight estimated from the amino acid sequences of these three proteins was smaller than the molecular weight estimated from the SDS-PAGE mobility was thought to be due to the post-translational sugar chain modification.
さらに、LA-a2タンパク質のアミノ酸配列(配列番号1)、LA-bタンパク質のアミノ酸配列(配列番号2)、およびLA-a1タンパク質のアミノ酸配列(配列番号3)は、それぞれ、配列番号4~6に示すポリペプチドの塩基配列から決定した。 Furthermore, the amino acid sequence of the LA-a2 protein (SEQ ID NO: 1), the amino acid sequence of the LA-b protein (SEQ ID NO: 2), and the amino acid sequence of the LA-a1 protein (SEQ ID NO: 3) are respectively SEQ ID NOs: 4-6. It determined from the base sequence of polypeptide shown in.
本発明に係るタンパク質は、キチナーゼ活性を有し、殺虫性を含む十分な耐虫性活性を発揮する。したがって、本発明に係るタンパク質は、耐虫剤として好適に用いられる。 The protein according to the present invention has chitinase activity and exhibits sufficient insect resistance activity including insecticidal properties. Therefore, the protein according to the present invention is suitably used as an insecticide.
Claims (8)
(a)配列番号1に示すアミノ酸配列からなるタンパク質;
(b)配列番号1に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質;
(c)配列番号2に示すアミノ酸配列からなるタンパク質;
(d)配列番号2に示すアミノ酸配列において、1または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、且つキチナーゼ活性を有しているタンパク質。 A protein characterized by any of the following (a) to (d):
(A) a protein comprising the amino acid sequence shown in SEQ ID NO: 1;
(B) a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 1 and having chitinase activity;
(C) a protein consisting of the amino acid sequence shown in SEQ ID NO: 2;
(D) A protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence shown in SEQ ID NO: 2 and having chitinase activity.
(I)配列番号4に示す塩基配列を有するポリヌクレオチド;
(II)配列番号4に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド;
(III)配列番号5に示す塩基配列を有するポリヌクレオチド;
(IV)配列番号5に示す塩基配列を有するポリヌクレオチドとストリンジェントな条件でハイブリダイズし、且つキチナーゼ活性を有するタンパク質をコードするポリヌクレオチド。 The polynucleotide according to claim 4, characterized by any one of the following (I) to (IV):
(I) a polynucleotide having the base sequence represented by SEQ ID NO: 4;
(II) a polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 4 under stringent conditions and encodes a protein having chitinase activity;
(III) a polynucleotide having the base sequence represented by SEQ ID NO: 5;
(IV) A polynucleotide that hybridizes with a polynucleotide having the base sequence shown in SEQ ID NO: 5 under stringent conditions and encodes a protein having chitinase activity.
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| WO2008108345A1 (en) * | 2007-03-02 | 2008-09-12 | National Institute Of Aglobiological Sciences | Insect-resistant protein and insect-resistance gene encoding the insect-resistant protein |
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Cited By (2)
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| CN109258693A (en) * | 2018-09-30 | 2019-01-25 | 大连理工大学 | Application of recombinant chitinase in insecticidal or bacteriostatic aspects |
| CN109258693B (en) * | 2018-09-30 | 2021-03-16 | 大连理工大学 | Application of recombinant chitinase in insecticidal or bacteriostatic aspects |
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