WO2010042800A1 - Procédés de reprogrammation de cellules somatiques et procédés d'utilisation de telles cellules - Google Patents
Procédés de reprogrammation de cellules somatiques et procédés d'utilisation de telles cellules Download PDFInfo
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- WO2010042800A1 WO2010042800A1 PCT/US2009/060138 US2009060138W WO2010042800A1 WO 2010042800 A1 WO2010042800 A1 WO 2010042800A1 US 2009060138 W US2009060138 W US 2009060138W WO 2010042800 A1 WO2010042800 A1 WO 2010042800A1
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- C12N5/00—Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
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- C12N2502/00—Coculture with; Conditioned medium produced by
- C12N2502/13—Coculture with; Conditioned medium produced by connective tissue cells; generic mesenchyme cells, e.g. so-called "embryonic fibroblasts"
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Definitions
- hemophilia is characterized by spontaneous and prolonged hemorrhage that can result in disability and death.
- the most common complication is chronic arthritis caused by bleeding within the joints. Traumatic injuries to individuals with hemophilia will cause rapid blood loss and, if not treated rapidly, will lead to death.
- Current therapies include fixed-dose prophylaxis, protein replacement therapies, and most recently, gene therapies.
- Current prophylaxis and protein replacements therapies are limited by incomplete efficacy, high cost, restricted availability and the possible development of neutralizing antibodies against Factor VIII in chronically treated individuals.
- much of the clinical presentation in hemophilia patients can be relieved by expression of only 3% of wild-type clotting protein, and in most cases an individual with 30% of wild-type clotting factor would be phenotypically normal.
- liver progenitor cells functionally integrated into the recipient liver expressed Factor IX and phenotypically corrected the mouse model.
- Factor IX Factor IX
- One option is to generate ES cell banks of cell lines carrying various HLA haplotypes.
- the extremely broad variety of immune types within the heterogeneous US population is a disincentive for this approach, as are ethical issues surrounding sourcing and use of ES cells.
- iPS cells exhibit morphological (i.e., round shape, large nucleoli and scant cytoplasm) and growth properties (i.e., doubling time; ES cells have a doubling time of about seventeen to eighteen hours) akin to ES cells.
- iPS cells express pluripotent cell- specific markers (e.g., Oct-4, SSEA-3, SSEA-4, Tra-1-60, Tra-1-81, and SSEA-I).
- pluripotent cell- specific markers e.g., Oct-4, SSEA-3, SSEA-4, Tra-1-60, Tra-1-81, and SSEA-I).
- iPS cells are not immediately derived from embryos and can transiently or stably express one or more copies of selected potency-determining factors at least until they become pluripotent.
- EBs are aggregates of ES cells or iPS cells that have passed through the first stage of embryonic development. That is, EBs have already made a lineage commitment to embryonic tissues and cannot generate extraembryonic trophectoderm. These experiments show that it is possible using the invention methods to generate EBs from fibroblast-derived iPS cells ( Figure 14). Although EBs have made an early lineage commitment, this does not affect their therapeutic potential because they can still generate all cell lineages of the developing embryo and particularly for the purposes of this example, endodermal lineages.
- Liver precursor and mature cells were also derived from iPS cells expressing Factor VIII and liver-specific markers including alpha fetoprotein, albumin, CYPlAl and HNF-4a ( Figure 17).
- EBs were digested into single cells and cultured as described in Example 1 except that the medium was supplemented with a mixture of cytokines and induction factors (FLT3 ligand, SCF, TPO thrombopoieitin, interferon-gamma, and VEGF) for 7 days.
- FLT3 ligand, SCF, TPO thrombopoieitin, interferon-gamma, and VEGF cytokines and induction factors
- H&E staining of the cells showed hematopoietic-like cells including erythroid cell precursors and neutrophils.
- Flow cytometry analysis of the hematopoietic-like cells were positive for hematopoietic cell surface markers B220, Terl 19, Gr-I and CD34.
- Tail-tip fibroblasts derived from C57BL/6 mice were cultured using growth medium containing High Glucose DMEM (Invitrogen), 10% certified FBS (Invitrogen) and IX pen strep (Invitrogen). Growth medium was changed every other day.
- Plat-E retroviral packaging cells (Clontech) were cultured using growth medium containing RPMI 1640 (Invitrogen), 10% certified FBS (Invitrogen) and IX pen strep (Invitrogen). Growth medium was changed every other day.
- OP9 stromal cells ATCC were cultured using growth medium containing alpha-MEM (Invitrogen), 20% certified FBS and IX pen strep. Growth medium was changed every other day.
- Polybrene was added to the virus cocktail to enhance infection efficiency. Infection was performed overnight. Virus containing media was removed and replaced with fresh prewarmed growth media. The fibroblasts were allowed to recover for 8 hours. The second batch of viruses were collected, filtered and used instantly for re-infection. Infection was performed as previously. Infected cells were allowed to recover for 7 days. Media was changed every other day.
- EB bodies from W4 ES and iPS cells were collected and digested into single cell suspension using 2mg/ml collagenase IV (Invitrogen). EB bodies were incubated for 20 minutes in collagenase IV at 37 0 C water bath. After incubation, cells were washed with enzyme-free dissociation medium (Invitrogen) and was triturated until suspension became homogenous. Cells were plated into gel coated MitomycinC-treated semi-confluent OP9 stromal cells using HoxB4 retrovirus and infection was performed overnight. Cells were then collected and virus containing medium was discarded.
- enzyme-free dissociation medium Invitrogen
- Colony forming unit assay was performed as previous described. Briefly, 2XlO "4 . CD34+/B220+/Terl 19+/Gr-l+/c-kit+ sorted cells were plated in low adherent 35mm culture dish (Stem Cell Technologies) with semi-solid methylcellulose medium M3434 (Stem Cell Technologies). Progenitor colonies were scored after 5 days.
- mice were injected with anti-asialo GMl antibody (Wako) according to manufacturer's instructions.
- Acute anemia was induced in 4-6 weeks old C57BL/6 mice using 50mg/ml Phenylhydrazine HCL. 3 days after injection, cells were injected intravenously with UlOT 6 CD34+/B220+/Terl l9+/Gr-l+/c-kit+ sorted.
- Anti- asialo GMl antibody was continuously injected 1 day, 1 week and 2 weeks after transplantation.
- EBs differenDay 32 ⁇ _g Begin differentiation of celts into hematopoietic cells by treatment tiated into - ⁇ ? of five cytokines FLT3L, SCF, TPO, ⁇ E ⁇ F,FN ⁇ hematopoietic Day 34 cells
- iPS-derived islet-like clusters both human and mouse derived response to glucose-stimulated insulin secretion.
- the islet-like clusters were sequentially treated with low (5.5mM Glucose with 5OuM Tolbutamide) and high (27.7 Glucose mM) concentrations of glucose.
- low glucose concentration insulin was detected in all iPS types at comparable level.
- high glucose concentration beta cells generated from human SALL4- ⁇ PS cells had a more robust response to glucose stimulation.
- cardiac specific markers included alpha heavy chain cardiac myosin (alpha-MHC), cardiac ventricle myosin light chain(MLV-2v), atrial natriuretic factor (ANF) and pluripotent stem cell marker OCT4.
- alpha-MHC alpha heavy chain cardiac myosin
- MLV-2v cardiac ventricle myosin light chain
- AMF atrial natriuretic factor
- OCT4 pluripotent stem cell marker
- Mouse fetal heart cDNA was used as control.
- H9, W4 ES cells and both sall4 iPS cells express OCT4 highly indicating cells under pluripotent status.
- Both human and mouse Sall4-iPS cells derived cardiomyocytes strongly expressed all the cardiac markers while no OCT4 expression ( Figure 2). This indicates that the iPS cells were successfully differentiated into mature cardiomycytes including ventricular and atrial cells.
- EBs were then monitored on a daily basis up to 55 days of differentiation.
- Day 22 shows stable attachment of EBs on the culture plate and cells on the edge of the plate continue to proliferate. More pronounced alveolar-like structures were observed at day 24th of differentiation.
- mRNA expression of typical endoderm and mesoderm lung cell markers Brachyury, FoxA2, and Soxl7 were examined in the iPS-derived lung progenitor cells.
- Results of qRT-PCR confirmed that iPS-derived cells expressed upregulated Brachyury, FoxA2, and Soxl 7 in the differentiation stage.
- early and mature lung markers SPC, TTF-I and SPA, SPB, CClO 5 respectively, were analyzed to characterized the population of iPS-alveolar cells.
- Results of qRT-PCR confirmed upregulation of early and mature lung makers, indicating a heterogeneous population.
- iPS-alveolar cells from the final stage of lung differentiation was analyzed for early and mature lung markers and sorted by flow cytometry.
- Flow cytometry analysis indicated upregulation of early markers SPC and TTF-I . Only mature lung marker SPB was stained while SPA could not be detected.
- Lung disease is the 3 r leading killer in America and is responsible for 1 in 6 deaths.
- Lung tissue is a uniquely specialized tissue in the body that can become irreversibly damaged by scarring and fibrosis that occur in cystic fibrosis (CF), emphysema, and sarcoidosis.
- CF cystic fibrosis
- emphysema emphysema
- sarcoidosis sarcoidosis
- ES embryonic stem cells
- Lung-ES functional epithelial alveolar cells
- Stage 1 conditions differentiate iPS cells into definitive endoderm and mesoderm layers in suspension
- Stage 2 condition attaches the embryo-like (EB) structures to tissue culture dishes coated with gelatin
- Stage 3 conditions further differentiate the EBs into Type II progenitor pneumocytes.
- Well established early lung markers, Surfactant Protein C (SPC) and TTF-I were upregulated at all the time points tested.
- Mature lung markers such SPA, SPB and CClO were upregulated as well demonstating heterogenous population of early and mature lung cells.
- TTF-I mRNA expression was markedly upregulated. This data suggests an abundance of lung epithelial progenitor cells even at the very late stage of differentiation.
- Wild type Tail-tip fibroblasts were used as the calibrator during analysis and cell suspension from lung from wild type mice were used as positive control.
- Day 24 lung epithelial progenitor cells derived from 3F-iPS cells were tested: SPC and TTF-I early lung markers stained positive.
- Mature lung markers SPA and SPB were also tested and only SPB stained positive comparable to the early marker counterparts.
- Mature lung markers, SPA and SPB were slightly positive.
- iPS cells (designated 3F-iPS for their 3 factor derivation), expressed typical pluripotent stem cell markers such as ES-alkaline phosphatase, SSEA-I, Nanog, Oct4 and SALL4.
- 3F-iPS cells gave rise to teratomas composed of all germ layers within one month following injection.
- Endothelial cells are thought to secrete the majority of FVIII protein in vivo.
- 3F-iPS cells were cultured using a hanging drop method for 2 days in LIF-free media where they readily formed spheroid EBs. By this method, the generation of EBs devoid of extraembryonic characteristics was ensured. After 2 day culture in a hanging drop, the EBs were collected and transferred to a nonadherent Petri dish and allowed to differentiate for an additional 2 days.
- VEGF vascular endothelial growth factor
- the endothelial cells derived from 3F-iPS were analyzed by immunofluorescence using various markers: FIk-I, an early endothelial progenitor marker, CD31 and FVIII, markers commonly used for cells or tissues of vascular endothelial origin.
- FIk-I an early endothelial progenitor marker
- CD31 an early endothelial progenitor marker
- FVIII markers commonly used for cells or tissues of vascular endothelial origin.
- Early stages of endothelial cells differentiation (day 6) showed expression of FIk-I but not CD31 which indicate the presence of endothelial progenitor cells.
- Mature endothelial differentiation stages at day 12 and 18 showed weak to no expression of FIk-I and strong expression of CD31.
- the mature differentiated cells also expressed FVIII.
- RT-PCR real-time PCR
- Hemophilia A is a sex-linked bleeding disorder characterized by the deficiency of coagulation Factor VIII causing prolonged bleeding due to the inability to efficiently clot.
- Treatment for hemophilia generally includes either fixed-dose prophylaxis or factor replacement therapy on an as needed basis. Regardless, neutralizing antibodies to the replacement protein have been reported and present a unique problem when treating hemophiliacs.
- endothelial progenitor cells derived from iPS cells can effectively express the FVIII protein, engraft within the hepatic parenchyma, and functionally integrate to provide the therapeutic benefit necessary for phenotypic correction of hemophilia. It is interesting to note that while the iPS derived endothelial cells were injected into the liver; higher levels of FVIII mRNA were detected in spleen, heart and kidney tissues of injected animals. Additional studies of GFP-tagged epithelial cells will be required to establish the complete whole-body distribution.
- virus- containing supernatant was collected for each transcription factor and combined with supplemental 8ul/mL polybrene (Chemicon, Billerica, MA). Medium was replenished and the transfected packaging cells were allowed to generate virus for an additional 24 hours. Filtered virus-containing supernatant was used to infect 2x10 5 tail-tip fibroblasts (TTF) from C57BL/6 mice at passage 3-4.
- TTF tail-tip fibroblasts
- 3F-iPS cells were harvested by 0.25% trypsin treatment, collected into tubes, centrifuged, and the pellets were resuspended in EB differentiation medium.
- a lO 6 cell suspension in lOOul was mixed with an equal volume of Geltrex (Invitrogen, Carlsbad, CA) and injected subcutaneously into SCID mice (Jackson Laboratory, Bar Harbor, Maine). A total of 5 mice were injected.
- teratoma were dissected and fixed with formalin (Fisher Scientific, Pittsburgh, PA). Paraffin-embedded tissue was sectioned and stained with hematoxylin and eosin.
- the EBs were transferred to 35mm tissue culture dishes after 4 days of growth in EB differentiation medium and allowed to differentiate into endothelial progenitor cells using medium containing KDMEM, 15% fetal bovine serum (FBS), 2 mM L-Glutamine, IxIO "4 M nonessential amino acids, IxIO -4 M 2-mercaptoethanol, Ix pen/strep, 20ng/ml bFGF (Invitrogen, Carlsbad, CA), 20ng/ml EGF (Invitrogen, Carlsbad, CA), 50ng/ml VEGF (R&D Systems, Minneapolis, MN), 20ng/ml IGF (Sigma, St Louis, MO), 50ug/ml Ascorbic acid (Sigma, St Louis, MO) and lug/ml Hydrocortisone (Sigma, St Louis, MO).
- endothelial progenitor cell differentiation cells were collected after 10 days of differentiation using Collagenase IV (Invitrogen, Carlsbad, CA) for identification and characterization.
- Collagenase IV Invitrogen, Carlsbad, CA
- mature endothelial cell differentiation cells were passaged using 0.25% trypsin (Invitrogen, Carlsbad, CA) and replated on collagen IV coated dishes using endothelial cell culture medium containing EGM-2 (Lonza, Portsmouth, NH), 15% FBS, 2 mM L-Glutamine, IxIO "4 M nonessential amino acids, IxIO -4 M 2-mercaptoethanol, Ix pen/strep, 20 ng/ml bFGF, 20ng/ml EGF, 50ng/ml VEGF, 20ng/ml IGF, 50ug/ml Ascorbic acid and lug/ml Hydrocortisone. Cells were passed when dishes were 90% confluent.
- Hemophilia A mice (Jackson Laboratory, Strain Name: B6; 129S4- F8tmlKaz/J, Stock Number: 004424) 6-8 weeks old were used for this study(28). Hemophilia A mice were originally produced by disruption of the FVIII gene through insertion of a targeting vector containing a neomycin gene cassette in the 3' end of exon 16. The targeting vector was introduced into 129S4/SvJae-derived Jl embryonic stem (ES) cells and was injected into C57BL/6 blastocysts.
- ES Jl embryonic stem
- Somatic cell reprogramming to create induced pluripotent stem (iPS) cells has been accomplished by numerous laboratories using retrovirus transduction, expression plasmids and non-integrating adenovirus to introduce multiple transcription factors, notably Oct4, Sox2, Klf4, and c-Myc.
- iPS induced pluripotent stem
- Sall4 is encoded by a gene with important roles in early embryonic development and pluripotency maintenance.
- Sall4 can regulate the transcriptional levels of Oct4, Sox2, Klf4 and c-Myc(13). This suggested that Sall4 may have potential utility in somatic cell reprogramming.
- W4 ES cells and Sall4-iPS cells were positively stained for ES- alkaline phosphatase, an enzymatic marker of self renewal.
- the cells were subjected to immunostaining with antibodies to Oct4, Sox2 and Nanog, all of which are known markers of pluripotent stem cells. Expression for each stem cell marker was positive, hi contrast, the surrounding fibroblasts did not stain positive for either of these proteins.
- the levels of protein expression in Sall4-iPS cells were qualitatively similar to those expressed in the murine ES cell line W4. Surrounding feeder layer was used as an internal negative control and showed no detectable signals.
- EBs embryoid bodies
- Sall4-iPS cells For in vivo testing of pluripotency, we injected Sall4-iPS cells into the flanks of SCID/NOD mice to determine their pluripotent potential. When 5X10 6 mouse Sall4-iPS cells were introduced into adult immunodeficient SCID/NOD mice through subcutaneous injection, the cells spontaneously formed teratoma-like masses containing ectodermal, mesodermal, and endodermal tissue types. The presence of three germ layers in teratomas derived from the injection of mouse Sall4-iPS cells indicates the pluripotent characteristics of the cells.
- the feeder cells were derived from a pool of day 13.5 embryos of CF-I mice were used for both mouse and human iPS cells as well as ES cells. These cells were maintained in High Glucose DMEM, 10% certified FBS and IX pen strep and were expanded up to passage 3. Confluent flasks were treated with 10 ug/ml mitomycin-C for 2.5 hrs. The cells were then washed 5 times with PBS and were collected by dissociation with 0.25% trypsin in PBS. Cells were then stored in freezing media containing 50% certified FBS, 40% High Glucose DMEM and 10% DMSO at -80 c until use.
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Abstract
La présente invention porte sur un procédé de reprogrammation de cellules somatiques de primate par exposition d'une cellule somatique de primate à SALL4 dans des conditions suffisantes pour reprogrammer les cellules ; et de culture des cellules exposées pour obtenir des cellules reprogrammées. On peut utiliser les cellules obtenues par les procédés de l'invention en tant que compositions pharmaceutiques dans des contextes cliniques, par exemple, le traitement de l'hémophilie A chez un sujet.
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US10467108P | 2008-10-10 | 2008-10-10 | |
| US61/104,671 | 2008-10-10 | ||
| US11692008P | 2008-11-21 | 2008-11-21 | |
| US61/116,920 | 2008-11-21 |
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| Publication Number | Publication Date |
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| WO2010042800A1 true WO2010042800A1 (fr) | 2010-04-15 |
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Cited By (61)
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| WO2011109837A3 (fr) * | 2010-03-05 | 2011-12-15 | Yupo Ma | Procédés et compositions pour le traitement du diabète au moyen de cellules pancréatiques de type bêta dérivées d'ips |
| WO2013058403A1 (fr) | 2011-10-21 | 2013-04-25 | 国立大学法人京都大学 | Méthode de culture de cellules individuellement dispersées et maintenues pluripotentes au moyen d'un flux laminaire |
| WO2013077423A1 (fr) | 2011-11-25 | 2013-05-30 | 国立大学法人京都大学 | Procédé pour la culture de cellules souches pluripotentes |
| WO2013111515A1 (fr) * | 2012-01-23 | 2013-08-01 | 国立大学法人 東京大学 | Procédé d'induction/activation d'une cellule souche/progénitrice cardiaque à l'aide d'un facteur spécifique |
| EP2609193A4 (fr) * | 2010-08-23 | 2014-02-26 | Univ New York State Res Found | Procédé d'expansion de cellules souches et utilisation de telles cellules |
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| WO2015020113A1 (fr) | 2013-08-07 | 2015-02-12 | 国立大学法人京都大学 | Méthode de production de cellule productrice d'hormone pancréatique |
| WO2015034012A1 (fr) | 2013-09-05 | 2015-03-12 | 国立大学法人京都大学 | Nouveau procédé pour l'induction de cellules précurseurs neurales produisant de la dopamine |
| WO2015064754A1 (fr) | 2013-11-01 | 2015-05-07 | 国立大学法人京都大学 | Nouveau procédé d'induction de chondrocytes |
| EP3081638A1 (fr) | 2015-04-16 | 2016-10-19 | Kyoto University | Procédé de production de pseudo-îlots |
| WO2016183593A3 (fr) * | 2015-05-14 | 2017-03-09 | The Regents Of The University Of California | Thérapie prénatale |
| US9783783B2 (en) | 2013-01-30 | 2017-10-10 | Cornell University | Compositions and methods for the expansion of stem cells |
| WO2017183736A1 (fr) | 2016-04-22 | 2017-10-26 | 国立大学法人京都大学 | Procédé de production de cellules précurseurs neurales produisant de la dopamine |
| EP3305899A1 (fr) | 2011-07-25 | 2018-04-11 | Kyoto University | Procédé de criblage de cellules souches pluripotentes induites |
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