WO2002014373A1 - Protein monitoring the activity of low-molecular weight gtp-binding protein - Google Patents
Protein monitoring the activity of low-molecular weight gtp-binding protein Download PDFInfo
- Publication number
- WO2002014373A1 WO2002014373A1 PCT/JP2001/006967 JP0106967W WO0214373A1 WO 2002014373 A1 WO2002014373 A1 WO 2002014373A1 JP 0106967 W JP0106967 W JP 0106967W WO 0214373 A1 WO0214373 A1 WO 0214373A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- protein
- low
- binding protein
- weight gtp
- gtp
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
- C07K14/47—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/82—Translation products from oncogenes
Definitions
- the present invention relates to a protein for monitoring the activity of a low molecular weight GTP-binding protein, a gene encoding the protein, an expression vector containing the gene, transformed cells and a transgenic animal carrying the expression vector,
- the present invention relates to a method for measuring the activation of a low-molecular-weight GTP-binding protein using a protein, and a method for screening a substance for regulating the activity of a low-molecular-weight GTP-binding protein.
- GTP-binding proteins are numerous and serve as important molecular switches. Therefore, it has been analyzed in great detail.
- the low molecular weight GTP-binding proteins are composed of the Ras family, the Rh0 family, the Rab family, the Ran family, etc. (Reference 1). These low-molecular-weight GTP-binding proteins are important molecular switches that control diverse intracellular signal transduction such as cell proliferation, cytoskeleton, intracellular transport, and nuclear transport.
- Low molecular weight GTP-binding proteins cycle between an inactivated form that binds to GDP and an activated form that binds to GTP ( Figure 1).
- the GTP-binding form binds to a target protein specific to each GTP-binding protein and activates the target protein.
- the protein that catalyzes the reaction of converting GDP-linked to GTP-linked is a guanine nucleotide exchange factor, and the protein that catalyzes the reaction of converting GTP-linked to GDP-linked is GTPase-activating enzyme (GTPase activator). ).
- GTPase activator GTPase activator
- GFP green fluorescent protein
- GFPs include CFP (cyan-emitting mutant of GFP) and YFP (yellow-emitting mutant of GFP), and improved proteins such as EGFP (enhanced green fluorescent protein) and ECFP (enhanced green fluorescent protein) CFP), EYFP (enhanced YFP), EBFP (enhanced blue-emitting mutant of GFP) and the like (in the present specification, these are collectively referred to as GFP-related proteins). Each of these is excited by light of a different wavelength and emits fluorescence of a different wavelength.
- FRET fluorescent resonance energy transfer
- the present invention relates to a protein for monitoring the activity of a low-molecular-weight GTP-binding protein, which enables non-invasive measurement of the activation of a low-molecular-weight GTP-binding protein; a gene encoding the protein; an expression vector containing the gene; Transformed cells and transgenic animals carrying the expression vector that express the protein and are useful for measuring the activation of non-invasive low molecular weight GTP-binding proteins; and the use of the protein.
- a method for measuring the activation of a low-molecular-weight GTP-binding protein more specifically, a method for measuring the amount ratio of GTP-binding to GDP-binding low-molecular-weight GTP-binding protein that can be used in living cells; and low-molecular-weight GTP-binding It is an object of the present invention to provide a method for screening a protein activity modulator.
- the gist of the present invention is:
- (6) a method for measuring activation of a low-molecular-weight GTP-binding protein, comprising a step of monitoring FRET in the activity monitor protein of the low-molecular-weight GTP-binding protein according to (1),
- a method for measuring activation of a low-molecular-weight GTP-binding protein comprising a step of detecting FRET in the cell according to (4) or the transgenic animal according to (5), and
- FIG. 1 shows a mechanism for controlling the activity of a low molecular weight GTP-binding protein.
- Ras is taken as an example of a low molecular weight GTP-binding protein, and the activity control mechanism of the low molecular weight GTP-binding protein is schematically shown.
- the low molecular weight GTP-binding protein is inactive when bound to GDP, and when guanine nucleotide exchange factor (GEF) acts on it, GDP is replaced by GTP and becomes activated.
- GEF guanine nucleotide exchange factor
- the activated GTP-binding protein undergoes a conformational change, binds to its specific target protein, and becomes able to activate it.
- Activated low molecular weight GTP-bound protein is hydrolyzed to GDP in the presence of GTP hydrolyzing enzyme (GAP), releasing inorganic phosphate (Pi) and returning to its inactive form .
- GAP GTP hydrolyzing enzyme
- Fig. 2 shows a method for measuring the activation of GTP-bound protein with low molecular weight using FRET.
- Ras is taken as an example of a low molecular weight GTP-binding protein
- Raf is taken as an example of a target protein.
- CFP cyan-emitting mutant of GFP
- YFP yellow-emitting mutant of GFP
- GFP receptor protein is excited by light at 505 nm and emits light having a maximum at 530 nm.
- these can also be used as GFP receptor protein and / or GFP donor protein.
- the monitor—in the protein the YFP at the amino terminal and the CFP at the carboxyl terminal are separated, so that There is little energy transfer to the country.
- some kind of stimulus for example, the addition of epidermal growth factor (EGF)
- EGF epidermal growth factor
- Ras becomes activated and binds to the Ras-binding domain (RBD) of the target protein Raf. Comes to the vicinity, and as a result, the energy transfer from CFP to YFP and the accompanying 530 nm fluorescence from YFP are observed. Therefore, the activation of Ras can be measured by measuring the FRET efficiency before and after stimulation (ie, before and after the activation of Ras).
- FIG. 3 shows the structure of plasmid pRafras1722.
- the expression vector used was PCAGGS, which has already been reported.
- EYFP Ras_RafRBD (Ras binding region) —a cDNA coding for the fusion protein in the order of ECFP was bound downstream of the CAG site ⁇ ⁇ .
- FIG. 4 shows the nucleotide sequence and predicted amino acid sequence of the translation region of plasmid pRafras1722.
- FIG. 5 shows the nucleotide sequence of the translation region of plasmid pRafras1722 and the predicted amino acid sequence (continued).
- Figure 6 shows the nucleotide sequence and prediction of the translation region of plasmid p Rafras1722. Indicates the measured amino acid sequence (continued).
- FIG. 7 shows the fluorescence profile of the expressed protein Rafras 1722.
- HEK 293 cells were transfected with 1 ⁇ & fras 1 722 and guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos) or GTP hydrolytic enzyme Gap lm expression vector (pEF-Bos-Gap lm). After transfection by the calcium phosphate method, the cells were solubilized after culturing at 48 hours, and the supernatant was obtained after centrifugation. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer.
- Sos in the right box of the graph shown in Fig. 7 indicates the fluorescence profile of Rafras 1722 when both pRafras 1722 and pCAGGS-mSos were transfected, and Gap lm indicates that pRafras 1722 and pEF- This shows the fluorescence profile of Rafras 1722 when Bos-Gap 1 m was transfected together.
- Figure 8 shows the ratio of GTP to GDP on the GTP-binding protein of the expressed protein Rafras 1722 [GTP / (GDP + GTP) (%)] versus the excitation wavelength of 433 nm at 433 nm and 530 nm. Shows the fluorescence intensity ratio (wavelength 530/475).
- pRafras 1722 and various amounts of guanine nucleotide exchange factor Sos expression vector pCAGGS-mSos
- GTP hydrolysis enzyme Gap lm expression vector pEF-Bos-Gap lm
- the Ra fras 1 72 2 after immunoprecipitation with anti-GFP antibody, separating the G TP and GDP bound to Ra fras 1722 by thin layer chromatography and quantified.
- the fluorescence profile of the cell lysate treated in the same manner was measured, and the fluorescence intensity ratio between the wavelength of 475 nm at the excitation wavelength of 433 nm and the wavelength of 530 nm was measured. It can be seen that the fluorescence intensity ratio is enhanced depending on the amount of GTP on Rafras1722.
- Figure 9 shows that a cell line expressing the expressed protein Rafras 1722 was obtained. Indicates that 1 ⁇ & fras 172 2 was transfected into N 1 ⁇ 13 cho3 cells to establish the cell line 3T3-Rafras. The cells were solubilized and analyzed for Rafras722 expression by immunoblotting using an anti-GFP antibody. The molecular weight is shown on the left side of the imnotlotting shown in FIG.
- FIG. 10 shows an analysis of Ras activation using 3T3-Rafras cells.
- the fluorescence profile (wavelength 450 ⁇ ! ⁇ 550 nm) excited at a wavelength of 3 nm was measured.
- FIG. 11 shows the structure of plasmid pR ai — c hu 311.
- the structure of the backbone vector is the same as in Fig. 3.
- FIG. 12 shows the nucleotide sequence and predicted amino acid sequence in the translation region of plasmid pRa i — chu311.
- FIG. 13 shows the nucleotide sequence and predicted amino acid sequence (continued) in the translation region of plasmid pR ai—c hu31 1.
- FIG. 14 shows the nucleotide sequence and the predicted amino acid sequence (continued) in the translation region of plasmid pRa i—chu311.
- FIG. 15 shows the fluorescence profile of the expressed protein R ai -c hu 311.
- HEK293 T cells have pRa i-chu31 1 and guanine nucleotide exchange factor C3G expression vector (pCAGGS-C3G; described in Reference 9) or GTP water-degrading enzyme rap 1 GAP II
- the expression vector (p CAGGS-rapl GAP II; described in Reference 9) was transfected with the calcium phosphate method, and after culturing for 48 hours, the cells were solubilized and centrifuged to obtain a supernatant. Excitation wavelength for the supernatant
- C 3 G in the right box of the graph shown in FIG. 15 is the fluorescence profile of R ai-c hu 31 1 when both pR ai — c hu 31 1 and pCAGGS — C 3 G were transfected Rap 1 GAP II is p This shows the fluorescence profile of Rai-chu311 when both Rai-chu311 and pCAGGS-raplGAPII were transfected.
- FIG. 16 shows the structure of plasmid pRa i-chu 158.
- the structure of the backbone vector is the same as in Fig. 3.
- FIG. 17 shows the nucleotide sequence and predicted amino acid sequence in the translation region of plasmid pRa i-chu 158.
- FIG. 18 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu158.
- FIG. 19 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu158.
- FIG. 20 shows the fluorescence profile of the expressed protein Rai-chu158.
- HEK 293 T cells contain pRa i-chu 158 and a guanine nucleotide exchange factor Cal DAG-GEF III expression vector (pCAGGS-CalDAG-GEF III; described in Reference 10) or GTP lmmolysis promoting enzyme Gap lm expression vector (PEF-Bos-Gap lm) was transfected by the calcium phosphate method. After culturing for 48 hours, the cells were solubilized and centrifuged to obtain a supernatant.
- pCAGGS-CalDAG-GEF III guanine nucleotide exchange factor Cal DAG-GEF III expression vector
- Gap lm expression vector PEF-Bos-Gap lm
- the fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer.
- Gap 1 m in the right box of the graph shown in FIG. 20 indicates the fluorescence profile of Ra i-chu 158 when both pRa i-chul 58 and pEF-Bos-Gap lm were transfected.
- DAG-GEF III shows the fluorescence profile of Rai-chu 158 when both pRa i-chul 58 and pCAGGS-Cal DAG-GEF III were transfected.
- FIG. 21 shows the nucleotide sequence and predicted amino acid sequence in the translation region of the plasmid pRa i—chu119.
- FIG. 22 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i—chu119.
- FIG. 23 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu119.
- FIG. 24 shows the fluorescence profile of the expressed protein Rai-chu119.
- HEK 293 cells were transfected with 13 ⁇ 4 & i-cu hu 119 or pRafras 1722 and guanine nucleotide exchange factor S os expression vector (pCAGGS-mSo s) by the calcium phosphate method, and cultured for 24 hours. After transferring at 33 and 40 ° C and culturing for an additional 24 hours, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer.
- the control in the right box of the graph shown in Fig. 21 is the fluorescence profile of Rai-chu119 when both pRafras 1722 and pCAGGS-mSos were transfected. This shows that this is the fluorescence profile of Rai-chu119 when pRai-chu119 and pCAGGS-mSos are transfected together.
- Ra i-chu 1 19 had increased reactivity to the guanine nucleotide exchange factor compared to the wild type (Rafras 17 22).
- FIG. 25 shows the results of the change over time in the fluorescence intensity of ECFP and EYFP in cells by the addition of epidermal growth factor (EGF).
- EGF epidermal growth factor
- excitation light having a wavelength of 430 nm was irradiated to obtain images at fluorescence wavelengths of 475 nm and 530 nm over time, and ECFP and EY FP were obtained from the images.
- the fluorescence intensity was determined.
- FIG. 26 is a graph showing changes in the fluorescence intensity ratio between ECFP and EYFP in the expressed protein Rafrasl722 by various guanine nucleotide exchange factors and GTP hydrolysis promoter.
- HEK293T cells were transfected with pRafrasl722 and a guanine nucleotide exchange factor expression vector or a GTP hydrolysis promoter expression vector by the calcium phosphate method. After transfection and culturing for 24 hours or more, the cells were solubilized and centrifuged to obtain a supernatant.
- the fluorescence intensity of the supernatant was measured at an excitation wavelength of 433 nm, a wavelength of 475 nm, and a fluorescence intensity of 530 nm using a fluorescence spectrophotometer.
- the ratio of the latter to the former is shown in the graph.
- FIG. 27 is a graph showing changes in the fluorescence intensity ratio between ECFP and EYFP in the expressed protein Rai-chu404 by various guanine nucleotide exchange factors and GTP hydrolysis enzymes.
- HEK293T cells were transfected with pRai-chu404 and a guanine nucleotide exchange factor expression vector or GTP hydrolysis promoter vector by the calcium phosphate method.After culturing for 24 hours or more, the cells were solubilized and centrifuged. To obtain a supernatant. The fluorescence intensity of the supernatant was measured at an excitation wavelength of 433 nm and at wavelengths of 475 nm and 530 nm using a fluorescence spectrophotometer. The ratio of the latter to the former (fluorescence intensity ratio) is shown in the graph.
- FIG. 28 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in C0S1 cells transfected with pRai-chulOIX or pRai-chu404X due to the addition of EGF.
- the C0S1 cells were transfected with pRai-chulOIX or pRai-chu404X. After culturing for 24 hours or more, the medium was replaced with a medium free of phenol red and serum.
- an inverted fluorescence microscope with a xenon light source (Carl Zeiss, Axiovert 100) is equipped with a rotating fluorescence excitation filter and a rotating fluorescence emission filter device (LUDL electronic), and a high-sensitivity cooled CCD camera (P hotometrix).
- the image was acquired using a system that can be controlled and analyzed by Metamorph image analysis software manufactured by Nippon Koupa Co., Ltd.
- the cells were irradiated with excitation light at 430 nm, and an image at the fluorescence wavelength of the ECFP donor at 475 nm was taken with a CCD camera, followed by an image at the fluorescence wavelength of the 530 thigh EYFP receptor. This was performed at 30 second intervals.
- the EYFP / ECFP fluorescence intensity ratio was divided into eight levels for each pixel on the digital image, and colors from blue to red were assigned.
- video images can be created by assigning ECFP fluorescence intensity as brightness. .
- the images at the times shown in these figures are shown.
- FIG. 29 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in subconfluent C0S1 cells transfected with pRai-chulOIX by addition of EGF.
- the experiment was performed by the same method as described in the explanation of FIG. 28, except that C0S1 cells in a subconfluent state were used.
- EGF was added to Rai-chulOIX-expressing cells, the process of increasing the fluorescence intensity ratio, which reflects the FRET efficiency, from the margin that did not adhere to other cells was observed. On the other hand, it can be seen that this increase in FRET efficiency is suppressed at the site where it adheres to the adjacent cells.
- FIG. 30 is a photograph showing a time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and intracellular distribution in PC12 cells transfected with pRai-chulOIX or pRai-chu404X due to the addition of nerve growth factor.
- Ras family G proteins are in different activation states at different sites in the cell, and the activity monitor proteins of the present invention have a temporal and spatial relationship with the Ras family — G protein activation. This indicates that it is the optimal molecular probe for obtaining relevant information.
- FIG. 31 shows the structure of plasmid pRai-chulOllX.
- the structure of the backbone vector is the same as in Fig. 3.
- FIG. 32 shows the structure of plasmid pRai-chul054X.
- the structure of the backbone vector is the same as in Fig. 3.
- FIG. 33 shows the structure of plasmid pRai-chul214X.
- the structure of the backbone vector is the same as in Fig. 3.
- FIG. 34 shows the fluorescence profiles of the expressed proteins Rai-chulOllx (wild-type), Rai-chul012X (activated), and Rai-chul013X (non-activated).
- the ⁇ 293> cells were transfected with pRai-chulOllx, pRai-chul012X, or pRai-chul013X by the calcium phosphate method, and after 48 hours, the cells were lysed and centrifuged to obtain a supernatant. At a wavelength of 433 nm, the fluorescence intensity at a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer.
- FIG. 35 shows the fluorescence profiles of the expressed proteins Rai-chul054x (wild type) and Rai-chul052X (activated type).
- HEK293T cells were transfected with pRai-chul054x or pRai-chu 1052X by the calcium phosphate method. 48 hours later, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 mn to 550 nm was measured with a fluorescence spectrophotometer.
- FIG. 36 shows the fluorescence profiles of the expressed proteins Rai-chul214X (wild type) and Rai-chul220X (activated).
- PRai-chul214X or pRai in HEK293T cells -chul220X was transfected by the calcium phosphate method, and after 48 hours, the cells were solubilized and centrifuged to obtain a supernatant.
- the fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 45 Onm to 550 nra was measured with a fluorescence spectrophotometer.
- FIG. 37 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in C0S1 cells transfected with pRai-chulOllX by addition of EGF.
- EGF is added to Rai-chulOllX-expressing cells, the fluorescence intensity ratio that reflects the FRET efficiency transiently increases throughout the cell within one minute, and then the fluorescence intensity ratio at the site where cell membrane ruffling occurs. And a decrease in the fluorescence intensity ratio at the center.
- the activity monitoring protein of the low molecular weight GTP-binding protein of the present invention utilizes the property that the GTP-binding low-molecular-weight GTP-binding protein specifically binds only to its target protein. It is a very useful protein for measuring non-invasive activation of small GTP-binding proteins.
- the monitor protein of the present invention is a fusion protein comprising a low molecular weight GTP-binding protein, a target protein of the low molecular weight GTP-binding protein, a GFP receptor protein, and a GFP donor protein. That is, the respective proteins are directly or indirectly linked in such a state that the original conformations are individually formed and the functions of the respective proteins can be fully exhibited.
- the rows have a structure in which the amino acid sequence portions of the proteins are directly or indirectly linked.
- Each protein constituting the monitor protein of the present invention may be a part of the protein, as long as the function of the protein can be fully exhibited.
- the target protein when referring to each protein contained in a monitor protein, for example, in the case of a target protein, for example, the target protein is distinguished from the target protein itself, and the target protein portion is simply referred to. Expressed as the target protein.
- FIG. 2 schematically shows an example of the monitor protein of the present invention, and shows the principle of a method for measuring the activation of a low molecular weight GTP-binding protein using FRET using the monitor protein.
- the FRET efficiency refers to the fluorescence intensity at the fluorescence wavelength of the GFP donor protein and the fluorescence of the GFP receptor protein when the monitor protein of the present invention is irradiated with excitation light for the GFP donor protein.
- the ratio with the fluorescence intensity at the wavelength (fluorescence intensity ratio). Details will be described later.
- the emission spectrum of the GFP donor overlaps the absorption spectrum of the GFP receptor, ii) the distance between the donor and the receptor, iii) the donor's luminescence moment and the receptor
- the three factors of the orientation of the extinction moment must be taken into account.
- the fusion of the GFP with another protein causes stress, resulting in GFP misfolding.
- the efficiency of chromophore formation is reduced, and non-fluorescent GFP is used.
- Possible Sex must also be considered. As described above, there are strict conditions for using the GFP donor and the GFP receptor to produce good expression of FRET between the two, and certain rules have been found for the arrangement between the two.
- the monitor protein of the present invention is obtained by appropriately combining the above proteins so that the desired effect of the present invention can be obtained, and the GTP-bound low-molecular-weight GTP-binding protein specifically binds only to its target protein.
- FRET is realized between the GFP donor protein and the GFP receptor protein, which can be changed according to the binding of GTP to low molecular weight GTP-binding protein. Its technical value is very large.
- the order of binding of the constituent proteins in the monitor protein of the present invention is appropriately selected in consideration of the increase in the difference in FRET efficiency before and after activation of the low molecular weight GTP-binding protein (hereinafter simply referred to as the difference in FRET efficiency). Can be done.
- the greater the difference in FRET efficiency before and after activation of the low molecular weight GTP-binding protein the more accurately the activation state of the protein can be grasped, thus improving the measurement accuracy of the activation of the low molecular weight GTP-binding protein. It is preferable because it can be performed.
- the low-molecular-weight GTP-binding protein and the low-molecular-weight GTP-binding protein in the monitor protein are bound to the target protein of the low-molecular-weight GTP-binding protein at the target protein binding site of the low-molecular-weight GTP-binding protein present on the amino-terminal side.
- the embodiment (1) is the one belonging to the family of Rho family.
- embodiment (2) is preferred.
- the GFP acceptor protein and GFP donor protein have their amino or carboxyl termini directly or indirectly to the amino or carboxyl terminus of a product in which a low molecular weight GTP-binding protein and a target protein are linked (linked product). And connected.
- a monitor protein in which the carboxyl terminal of the GFP receptor protein is directly or indirectly connected to the carboxyl terminal of the GFP receptor protein at the amino terminal of the ligated product is preferable.
- the monitor protein of the present invention in the monitor protein, a GFP receptor protein, a low molecular weight GTP binding protein, a target protein of the low molecular weight GTP binding protein, and a GFP dona protein from the amino terminal side. Or directly or indirectly from the amino terminus side to become the GFP receptor protein, the target protein of the low molecular weight GTP binding protein, the low molecular weight GTP binding protein, and the GFP donor protein, respectively. Those connected are particularly preferred.
- the “indirect linking” refers to a mode in which the linking between proteins is performed, for example, via a peptide or the like as a spacer described later.
- the low-molecular-weight GTP-binding protein that is a component of the monitor protein of the present invention is not particularly limited as long as it is known as the protein, but it belongs to the Ras superfamily from the viewpoint of usefulness. Are preferable, and among them, those belonging to the Ras family or the Rho family are more preferable. More specifically, the group consisting of H—Ras, K—Ras, N—Ras, R—Ras, Rap1A, RapB, Rap2A, and Rap2B, or RhoA, R One selected from the group consisting of hoB, RhoC, Rac1, Rac2, and Cdc42 is preferred.
- the target protein of the low-molecular-weight GTP-binding protein is not particularly limited as long as each low-molecular-weight GTP-binding protein specifically binds to the GTP-binding protein as exemplified above. .
- Preferred from the viewpoint of usefulness Is Ra f or Ra 1 GDS, or Pak or mDia.
- a combination of the low-molecular-weight GTP-binding protein and the target protein from the viewpoint of utility and specificity, a combination in which the low-molecular-weight GTP-binding protein is H-Ras and the target protein is Raf, or A combination in which the low-molecular-weight GTP-binding protein is Rap1A and the target protein is Ra1GDS, a combination in which the low-molecular-weight GTP-binding protein is Rac1 and the target protein is Pak, and a low-molecular-weight GTP-binding Particularly preferred is a combination in which the protein is Cdc42 and the target protein is Pak, or a combination in which the low molecular weight GTP-binding protein is RhoA and the target protein is mDia.
- any of the GFP-related proteins exemplified above can be used, but from a functional viewpoint, EGFP or EYFP is preferable.
- any one of the GFP-related proteins exemplified above can be used as the GFP donor protein, but from the functional viewpoint, it is preferably ECFP or EBFP.
- the low molecular weight GTP-binding protein is H-Ras
- the target protein is R af
- the GFP donor protein is ECFP
- the GFP receptor protein is EYFP
- the low molecular weight GTP-binding protein is Rap1A
- the target protein is Ra1 GDS
- GFP donor protein is ECFP
- GFP receptor protein is EYFP
- low molecular weight GTP binding protein is Rac 1
- target protein is Pak
- GFP donor protein is ECFP
- GFP If the receptor protein is EYFP, or the low molecular weight GTP-binding protein is Cdc42, the target protein is Pak
- the GFP donor protein is ECFP, GFP receptor-protein Is EYFP, or the low-molecular-weight GTP-binding protein is RhA
- the target protein is mDia
- the GFP donor protein is ECFP, GFP receptor-protein Is EYFP, or the low-molecular-weight GTP-binding
- the order of binding of the low-molecular-weight GTP-binding protein, the target protein, the GFP donor protein, and the GFP receptor protein is preferably determined in the monitor protein of the present invention from the viewpoint of increasing the difference in FRET efficiency.
- those obtained by exchanging EYFP and ECFP for each other can also be suitably used.
- the low-molecular-weight GTP-binding protein may be a part of the protein as long as it can bind to the target protein, and need not necessarily be the entire (full-length) protein.
- a part of the low-molecular-weight GTP-binding protein is, for example, a method in which the protein molecule is produced in Escherichia coli according to a known method, and bound to GTP in a test tube, whereby the binding to the target protein can be detected. Refers to the protein part.
- the detection can be carried out, for example, by immunoprecipitation with an antibody against the target protein and examining by immunoblotting whether a part of GTP-bound protein is coprecipitated.
- a protein portion consisting of an amino acid sequence portion preferably corresponding to positions 1-180, more preferably positions 1-172 is represented by R-Ras.
- R-Ras a protein portion comprising an amino acid sequence portion corresponding to positions 1 to 204, more preferably 28 to 204; if Rac 1, a protein portion preferably comprising an amino acid sequence portion corresponding to positions 1 to 177
- Cdc42 the amino acid sequence portion consisting of the amino acid sequence portion preferably corresponding to positions 1 to 176 if Cdc42, and the amino acid sequence preferably corresponding to positions 1 to 176 if Rh0A List the protein part consisting of Can be.
- At least one, more preferably 1 to 28, and still more preferably 17 to 28 amino acid sequences are preferably present in the amino terminal region and / or the carboxyl terminal region of the amino acid sequence. And those having an amino acid deficiency.
- the amino acid deletion site in such a region is not particularly limited. For example, in the case of H-Ras, the difference in FRET efficiency was greater when the C-terminus was truncated to position 172 than when it was truncated to position 180.
- the amino acid sequence preferably has at least one, more preferably 9 to 20, and more preferably 17 amino acids in the carboxyl-terminal region of the amino acid sequence. Also, in the case of R-Ras, the difference in FRET efficiency was greater when the 28 amino acids were deleted from the amino terminal than when the amino acid was not deleted. That is, the amino acid sequence preferably has a deletion of at least 1, more preferably 1 to 28, and even more preferably 28 amino acids in the amino terminal region of the amino acid sequence.
- the amino-terminal region or lipoxyl-terminal region refers to a region, preferably up to 30 amino acids in number, from the amino terminal or carboxyl terminal in the amino acid sequence of the low molecular weight GTP-binding protein.
- the target protein may be a part of the corresponding low molecular weight GTP-binding protein as long as it can bind to the corresponding low molecular weight GTP-binding protein, and does not necessarily need to be the whole (full length).
- the part of the target protein refers to a protein part in which the binding to the corresponding low molecular weight GTP-binding protein can be detected in the same manner as in the low molecular weight GTP-binding protein.
- Ra f GenBank / EBL terminology number: X03484
- it is preferably the Ras binding region (RBD), more preferably, the position 51 to 204, more preferably the position 51 to 204.
- the protein portion comprising the amino acid sequence portion is Ra1 GDS (GenBank / EMBL accession number: U14417), an amino acid sequence corresponding to preferably positions 202 to 309, more preferably positions 211 to 297 Pak1
- GFP donor protein and / or the GFP receptor protein may be a part of the protein as long as the function of pairing with FRET is maintained, and it is not necessarily required to be all (full length).
- the carboxyl termini of their amino acid sequences results in increased differences in FRET efficiency.
- those having preferably at least one, more preferably 1 to 11 deletions in the carboxyl terminal region of their amino acid sequences can be mentioned.
- the amino acid deletion site in such a region is not particularly limited.
- EYFP it is preferably at least one, more preferably 1-11, and still more preferably in the carboxyl terminal region of the amino acid sequence.
- the amino acid sequence has a deletion of at least one, more preferably 1 to 11, and even more preferably 11 amino acids in the carboxyl terminal region of the amino acid sequence.
- the carboxyl terminal region refers to the amino acid sequence of the GFP-related protein used in the present invention, from its lipoxyl end to the number of amino acids, preferably from 1 to 20, more preferably 11 The area up to.
- Whether the FRET pair function is maintained or not is determined by, for example, a pair of protein molecules that are assumed to form a FRET pair according to a known method. Can be produced in Escherichia coli, and the cell extract containing the pair of proteins can be evaluated by observing the fluorescence intensity at the expected excitation wavelength of each of the proteins.
- the GFP receptor protein and / or the GFP donor protein may have a mutation.
- Such a mutation can be introduced into any site in the amino acid sequence of the GFP receptor protein and / or the GFP donor protein, as long as the function of pairing with FRET is maintained.
- mutations include substitution of a plurality of amino acids. Specific examples of such amino acid substitutions include, for example, Phe64Leu, Va168Leu, Ser72Ala, Ile67Thr and the like. Is mentioned. It is preferable to introduce such a variation since effects such as an increase in chromophore formation efficiency and an increase in FRET efficiency can be obtained. Mutation can be introduced by a method using a known restriction enzyme or a method using PCR (polymerase chain reaction).
- low-molecular-weight GTP-binding proteins and / or their target proteins into which mutations have been introduced can also be suitably used in the present invention.
- a point mutation by introducing a point mutation, a mutant having improved sensitivity to guanine nucleotide exchange factor or GTPase activator can be obtained.
- Such a mutation can be introduced into any site in the amino acid sequence of the low molecular weight GTP-binding protein and / or its target protein as long as the function of binding to each other is maintained.
- examples of the mutation include amino acid substitution, insertion, and deletion. Specifically, for example, an embodiment in which I 1 e 36 is changed to Leu in the amino acid sequence of H—Ras (I 1 e 36 L eu).
- H-Ras having such a mutation can be suitably used in the monitor protein of the present invention.
- the mutation can be introduced by a method using a known restriction enzyme or a method using PCR.
- the spatial arrangement of the constituent proteins is a factor related to the expression of their functions.
- the difference in FRET efficiency can be greatly increased.
- a spacer is preferably inserted between the low-molecular-weight GTP-binding protein and the target protein from the viewpoint of increasing the difference in FRET efficiency.
- Preferable peptide sequences include peptides consisting of preferably 1 to 30, more preferably 1 to 10 consecutive arbitrary amino acids.
- GTP-binding protein is localized in the cell. Activation can be directly measured, which is preferable.
- GTPZGDP ratio amount ratio
- GTP binds to the low molecular weight GTP-bound protein.
- the binding of the low-molecular-weight GTP-binding protein to the target protein is induced in the monitor protein, resulting in a change in the overall conformation, and the GFP receptor protein and the GFP donor protein are changed. The distance and the direction change.
- irradiation with light of a specific wavelength causes the increase in FRET efficiency to be detected between such a protein and the donor protein (Fig. 2).
- Such changes in the FRET efficiency are affected by the arrangement of the GFP receptor protein and the GFP donor protein after the conformational change of the monitor protein.
- the width of the change in the FRET efficiency that is, the increase or decrease in the difference in the FRET efficiency can be appropriately adjusted as desired by inserting a spacer peptide or the like, for example, depending on the properties of each constituent protein used.
- the present invention also provides a gene encoding the monitor protein of the present invention.
- a gene is obtained by obtaining the genetic information of each of the constituent proteins of the protein from GenBank or the like, and using a known PCR method or a method using a restriction enzyme and a ligase according to a conventional method. Can be made.
- accession numbers in GenBankZEMB L of each protein suitably used as a constituent protein of the monitor protein of the present invention are shown below.
- the accession number is shown in parentheses after each protein name.
- Raf (X03484), Ra1 GDS (U14417), Pak1 (NM002576), mDia1 (E17361)
- EGFP U76561
- EYFP AVU73901 1
- ECFP AB041904
- EBFP GFP has the following three mutations: Ph e 64
- the present invention further provides an expression vector containing the gene.
- a vector may be a known prokaryotic cell expression vector such as pGEX-2T (Amersham-Pharmacia Biotech), a eukaryotic cell expression vector such as pCAGGS (for example, pGEX-2T). Reference 7) or by insertion into a viral vector, for example, p Shutt 1 e (manufactured by CLONTECH).
- the expression vector is preferably an expression plasmid.
- the present invention further provides transformed cells and transgenic animals that carry the expression vector.
- Such cells can be obtained by introducing the expression vector into target cells.
- a known transfection method or a virus infection method can be used as a method for introduction into cells, and there is no particular limitation.
- a calcium phosphate method, a lipofection method, or an electoral poration method can be used.
- Eukaryotic cells or prokaryotic cells can be used as the cells, and there is no particular limitation.
- eukaryotic cells include human embryonic kidney-derived HEK293 T cells, monkey kidney-derived COS cells, human umbilical cord-derived HUVEC cells, yeast, etc.
- Prokaryotic cells include cultured cells such as Escherichia coli, and other various cells. it can.
- Transgenic animals can be obtained by directly introducing the expression vector into an individual such as a mouse by a known method, for example, by microinjecting plasmid DNA into the nucleus of a fertilized mouse egg. it can.
- the present invention further provides a method for measuring the activation of a low molecular weight GTP binding protein using the monitor protein of the present invention.
- activation of the low molecular weight GTP-binding protein can be measured by detecting FRET in the monitor protein of the present invention.
- FRET can be detected in the above-described transformed cell or transgenic animal of the present invention, and the activation of a low-molecular-weight GTP-binding protein in the cell or animal can be directly measured.
- the GTP-GDP ratio (or GTPZ (GDP + GTP-GTP) is measured separately by measuring the GTP-bound low-molecular-weight GTP-binding protein and the GDP-bound low-molecular-weight GTP-binding protein produced by the release of inorganic phosphate from GTP. ) Ratio) (all are molar ratios), and if the corresponding FRET efficiency is measured and a calibration curve is prepared in advance, the GTP ratio is calculated based on the FRET efficiency of the cell or animal. be able to.
- the transformed cells of the present invention that can express the monitor protein are cultured under conditions that allow expression of the protein.
- the cells are solubilized.
- the method for solubilizing the cells is not particularly limited, but a solubilization method using a solution containing the detergent TritonXlOO is preferable.
- the solubilized solution is irradiated with excitation light (eg, at a wavelength of 433 nm) for GFP donor protein, and the fluorescence profile is measured, for example, at a wavelength in the range of 45 Onm to 550 nm using a known fluorescence spectrophotometer.
- the ratio of the fluorescence intensity of the GFP donor protein at a wavelength of 475 nm to the fluorescence intensity of the GFP receptor protein at a wavelength of 530 nm [(Fluorescence at a wavelength of 530 nm) Intensity) / (wavelength 47 Fluorescence intensity at 5 nm)] is calculated, and this is defined as the FRET efficiency from GFP donor protein to GFP receptor protein.
- FRET efficiency increases after binding (that is, after activation of the low-molecular-weight GTP-binding protein) compared to before GTP-binding to the low-molecular-weight GTP-binding protein. The activation of is measured.
- the activation and inactivation of the low-molecular-weight GTP-binding protein can be performed, for example, by using the guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos; described in Reference 9) as the monitor protein of the present invention.
- pCAGGS-mSos guanine nucleotide exchange factor Sos expression vector
- EGF epidermal growth factor
- the GTP hydrolyzing enzyme Gap lm expression vector pEF-Bos-Gap lm; described in Reference 9
- This can be done by transfecting the cells.
- 13 ⁇ 4 £ 3 ⁇ 4Efficiency is 0? Since the change is caused by a change in the distance and direction between the donor protein and the GFP receptor protein, a change in the structure of the monitor protein can be detected by a change in the FRET efficiency.
- the transformed cells or transgenic animals of the present invention that express the monitor protein are observed with a fluorescence microscope, and changes in FRET efficiency that occur before and after activation of the low-molecular-weight GTP-binding protein are directly detected.
- the activation and inactivation of the low-molecular-weight GTP-binding protein can be performed in the same manner as in the above (1) measuring method using a spectrophotometer.
- the fluorescence microscope there is no particular limitation on the fluorescence microscope to be used, but a high-sensitivity cooled CCD equipped with a rotating fluorescence excitation filter and a rotation fluorescence emission filter in a known inverted fluorescence microscope (Carl Zeiss, Axiovert 100) having a xenon light source Those with a camera are preferred. Further, it is desirable that the filter and the camera image be controlled and analyzed by using Metamorph image analysis software manufactured by Nippon Ichi-Par.
- the guanine nucleotide exchange factor Sos expression vector can be introduced into cells or animals capable of expressing the protein in various amounts to introduce various activation states (ie, activation) of the low molecular weight GTP-binding protein. States of varying degrees). Next, the cells or animals in each state are observed with a fluorescence microscope, and the FRET efficiency is determined in the same manner as described above.
- GTPZGDP ratio is calculated by measuring low molecular weight GTP-bound protein. Specifically, the GTPZGDP ratio is determined by measuring the amount of GTP bound to a low molecular weight GTP-binding protein and the amount of GDP bound by a known method (Reference 2). Then, the obtained GTP DP ratio is related to the FRET efficiency determined in advance. That is, the FRET efficiency and the GTPZGDP ratio at the measurement time point in each state are measured, and a calibration curve is created based on these.
- a calibration curve is separately prepared in this way, the FRET efficiency in cells or animals expressing the monitor protein can be measured directly using a fluorescence microscope, and the GTP / GTP / It is possible to calculate the GDP ratio. Therefore, the activation state of the low-molecular-weight GTP-binding protein in a cell or an individual can be easily ascertained noninvasively, and the GTPZGDP ratio in such a state can be specifically obtained.
- the method using such a calibration curve can be similarly used in the method (1).
- a protein monitor for the activity of a low-molecular-weight GTP-binding protein that enables non-invasive measurement of the activation of the low-molecular-weight GTP-binding protein, a gene thereof, and the like.
- it expresses such a monitor protein and retains the expression vector useful for measuring the activation of a non-invasive low molecular weight GTP-binding protein.
- Transformed cells and transgenic animals are provided, as well as methods for measuring the activation of low molecular weight GTP binding proteins using the protein.
- a substance that changes the activity of a low-molecular-weight GTP-binding protein is constructed by constructing a cell that expresses the activity monitor protein of the low-molecular-weight GTP-binding protein of the present invention and using a bioassay system.
- a salt thereof ie, a modulator of the activity of a low molecular weight GTP-binding protein.
- the test substance in the method is not particularly limited, but examples include peptides, proteins, non-peptidic substances, synthetic substances, fermentation products, and the like.
- the screening method of the present invention can be carried out in the presence of (i) a low molecular weight GTP-binding protein activator, or (ii) in the absence of the activator.
- the low-molecular-weight GTP-binding protein activator is a substance that activates a low-molecular-weight GTP-binding protein, and includes, for example, cell growth factors such as epidermal growth factor, and cytodynamics such as interleukin. Can also this It is not limited to them.
- the activity regulating substance of the low-molecular-weight GTP-binding protein is a substance that enhances or reduces the activity of the low-molecular-weight GTP-binding protein, and in the case of (ii), the activity of the low-molecular-weight GTP-binding protein is It can be screened as a substance to enhance.
- the screening method of the present invention is characterized in that, in the step (a), in the presence or absence of the activating substance, the cell expressing the activity monitor protein of the low-molecular-weight GTP-binding protein of the present invention is treated with the cell.
- the sample is brought into contact with the test substance (aspect 1).
- the method of contacting is not particularly limited, and can be performed, for example, by culturing the cells in the presence of a test substance.
- the activity monitor of the low-molecular-weight GTP-binding protein of the present invention is performed (case 2), where the cells expressing the protein are not brought into contact with the test substance.
- step (b) the activity of the low-molecular-weight GTP-binding protein in each case is measured, and the change in the activity of the low-molecular-weight GTP-binding protein in embodiment 1 compared to embodiment 2 is detected, whereby the low-molecular-weight GTP-binding protein is detected.
- the substance that further enhances the activity of the low-molecular-weight GTP-binding protein is an activity-regulating substance that can enhance the activity of the low-molecular-weight GTP-binding protein.
- a reducing agent is an activity modulator that can decrease the activity of a low molecular weight GTP binding protein.
- the substance that enhances the activity of the low-molecular-weight GTP-binding protein is an activity modulator that can enhance the activity of the low-molecular-weight GTP-binding protein.
- human H-Ras is Ras
- human c-Raf1 is Raf
- human Rap1A is Rap1A
- human RalgDs is RalGDS
- Human R-Ras is called R-Ras.
- human Cdc42 is Cdc42
- human RhoA is RhoA
- human Pakl is Pakl
- human mDia1 is mDia1.
- the sense primer 1 h R as X h (5′-CTCGAGATGACGGAATATAAGCTGGTGGTG-3 ′) (SEQ ID NO: 1) and the antisense primer 1 Ra s PCR (Polymerase chain reaction) using 1 72Ra f (5'-AGTGTTGCTTGTC TTAGAAGGGGTACCACCTCCGGAGCCGTTCAGCTTCCGCAGCTTGTG-3 ') (SEQ ID NO: 2) and a thermostable DNA replication enzyme PfX (Gibco-BRL Bethesda, USA)
- PfX thermostable DNA replication enzyme
- the sense primer hRas Xh has the nucleotide sequence of the cleavage site of the restriction enzyme XhoI shown underlined at the 5 'end and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence at positions 1 to 8 of Ras.
- the antisense primer Ras172Raf is complementary to the cDNA complementary to the amino-terminal region (from position 61 to position 67) of the amino acid sequence of the Ras binding region of Raf from the 5 'end. It consists of the base sequence, spacer sequence (underlined), and the base sequence of the complementary strand of c • DNA corresponding to the amino acid sequence from position 166 to position 172 of Ras.
- the sense primer Ra f RBD—F 1 (5′-GGTACCCCTTCTAAGACAAGCAACACT-3 ′) (SEQ ID NO: 3) and antisense Using the sense primer Ra f RBDn 2 (5′-GCGGCCGCCCA GGAAATCTACTTGAAGTTC-3 ′) (SEQ ID NO: 4) and the Pfx, it corresponds to the amino acid sequence of positions 51 to 1.3 of Ra f by PCR method. Amplify the cDNA portion did.
- the sense primer Ra f RBD—Fl is the nucleotide sequence of the cleavage site of the restriction enzyme K ⁇ I underlined at the 5 'end and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence from position 51 to position 57 of Raf. Consists of On the other hand, the antisense primer Ra f RBD n2 has the base sequence of the cleavage site of the restriction enzyme Not I and the carboxyl terminal region of the amino acid sequence of the Ras binding region of Ra f (position 125 From position 131 to position 131).
- Ras was determined by PCR using the sense primer hR as Xh, the antisense primer Raf RBDn2 and the Pfx, and PCR.
- a cDNA consisting of a chimeric gene encoding Raf was amplified.
- the obtained DNA fragment was ligated to pCR-b1unitII-TOPO (Invitrogen), and Escherichia coli was transformed with the obtained plasmid construct. After culturing such Escherichia coli, a plasmid was purified by a known alkaline SDS method.
- p7 (5'-CGCCAGGGTTTTCCCAGTCACGAC-3 ') (SEQ ID NO: 5) and primer P8 (5'-AGCGGATAACAATTTCACACAGGAAAC) were added to pB l ue scrip t-SKI I (+) (Stratagene)' s Martinburg roning site. -3 ′) (SEQ ID NO: 6) and amplified by PCR in the same manner as described above to obtain a DNA fragment.
- pCAGGS (Reference 7), a mammalian cell expression vector, was cut with EcoRI and blunt-ended with K1enow enzyme. Next, the DNA fragment and the pCAGGS after the treatment were ligated with T4 DNA ligase. The resulting vector is called pC AGGS-P7.
- EYFP cDNA As type III, the sense primers GFP—N 2 (5′-GGATCCGGCATGGTGAGCAAGGGCGAGGAG-3 ′) (SEQ ID NO: 7) and antisense primer GFP—N3 (5′-GGATCCGGTACCTCGAGCTTGTACAGCTCGTCCATG-3 ′) — (SEQ ID NO: : 8) and the above-mentioned Pfx, cDNA corresponding to the full-length amino acid sequence of EYFP was amplified by PCR.
- Sense Primer GFP—N2 is the base sequence of the cleavage site of the restriction enzyme BamHI, underlined at the 5 'end, a 3-base spacer, and the amino acid sequence at positions 1 to 7 of EYFP.
- the base sequence of the cDNA portion corresponding to On the other hand, the antisense primer GFP-N3 has the nucleotide sequence of each of the cleavage sites of the restriction enzymes BamHI, KnI and XhoI shown underlined at the 5 'end and the amino acid sequence of ECFP described below.
- EGFP Genebank / EMBL R / C / No .: U76561
- four amino acid substitutions (Tyr67Trp; Asnl47Ile; Metl54Thr; Vall64Ala) were introduced by a known method using a PCR method was used.
- the cDNA of ECF P was used as type II, and the sense primer XFPNott2 (5'-GCGGCCGCATG GTGAGCAAGGGCGAGGAGC-3 ') (SEQ ID NO: 9) and antisense primer XFP-Bg1 (5'- Using AGATCTACAGCTCGTCCATGCCGAGAG-3 ′) (SEQ ID NO: 10) and the aforementioned PfX, cDNA corresponding to the full-length amino acid sequence of ECFP was amplified by PCR.
- the sense primer XF PNot 2 corresponds to the base sequence of the cleavage site of the restriction enzyme Not I shown underlined at the 5 'end and the amino acid sequence from position 1 to position 8 of ECFP. It consists of the base sequence of the DNA part.
- the antisense primer XFP—Bg1 binds to the base sequence of the cleavage site of the restriction enzyme Bg1II and the carboxyl terminal region (from 231 to 237) of the amino acid sequence of ECFP, which are underlined at the 5 'end. And the base sequence of the complementary strand of the corresponding cDNA portion.
- the pCAGGS-P7 obtained in the above (i) was cleaved with the restriction enzyme XhoI, and treated with the Klenow enzyme in the presence of dTTP and dCTP.
- the EYFP DNA fragment obtained in (ii) above was digested with BamHI and then treated with the K1enow enzyme in the presence of dGTP and dATP. The resulting two gene fragments were ligated with T4 DNA ligase to obtain a plasmid.
- the plasmid was cleaved with NotI and Bg1II, and then the DNA fragment of ECFP obtained in the above (iii) which had been cleaved with NotI and Bg1II, and a T4 DNA ligase. Ligation was carried out.
- the obtained plasmid was named pFret2.
- the pFret 2 obtained in the above (2) — (iv) was cut with XhoI and NotI, and then in (1)-(iii), which was cut in advance with XhoI and NotI.
- the obtained chimeric gene was ligated using T4 DNA ligase.
- the resulting plasmid is called pRafrasl722.
- the structure of pRafrasl 722, the nucleotide sequence of its translation region (SEQ ID NO: 11) and the predicted amino acid sequence (SEQ ID NO: 12) are shown in FIGS. 3 and 4 to 6, respectively.
- nt 1240-125 linker nt 1258-1500 Raf
- nt 1510-2220 Owan jellyfish ECFP
- Ras activity monitor protein Ras activity monitor protein (Rafrasl722) in mammalian cells and analysis by spectrophotometry
- HEK 293 T cells derived from human fetal kidney were cultured in DMEM medium (manufactured by Nippon Pharmaceutical Co., Ltd.) containing 10% fetal serum.
- DMEM medium manufactured by Nippon Pharmaceutical Co., Ltd.
- the pRafrasl 722 obtained in the above (3) and the guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos) or the GTP water degradation promoting enzyme Gap lm expression vector (pEF — Bo s — Gap lm) was transfected by the calcium phosphate method.
- the HEK293 T cells after the transfection were cultured in a DMEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum to express the Ras activity monitor protein. After culturing for 48 hours, the cells were washed with phosphate buffered saline and lysed with a lysis solution (20 mM Tris-HCl, pH 7.5, 150 mM NaCL 5 mM MgCh, 0.1% Triton X-100). The obtained cell lysate was centrifuged at 10,000 xg, and the supernatant was recovered.
- the supernatant was placed in a 1 ml cuvette of a fluorescence spectrophotometer (FP-750, manufactured by JASCO Corporation), and the fluorescence intensity from 450 nm to 550 nm was measured at an excitation wavelength of 433 nm.
- FP-750 fluorescence spectrophotometer
- the expressed Ras-active monitor protein was immunized with an anti-GFP antibody. Separation of sedimented and bound GTP and GDP by thin-layer chromatography, FRET efficiency obtained from the fluorescence profile data obtained for the Ras activity monitor protein (excitation at 433 nm wavelength). Then, the value obtained by dividing (the fluorescence intensity at a wavelength of 530 nm) by (the fluorescence intensity at a wavelength of 475 nm) can be associated with the actual degree of GTP binding (Fig. 8). In FIG. 8, the FRET efficiency is expressed as “fluorescence intensity ratio (wavelength 5 30/475) ”and the degree of GTP binding was expressed as rGTP / 7 (GDP + GTP) (%) J.
- Monkey kidney-derived COS 7 cells were cultured in a FUNOLED Red-free MEM medium (manufactured by Nippon Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum.
- PRafras1722 obtained in the above (3) was transfected into the COS 7 cells by the calcium phosphate method.
- the transfected COS 7 cells were cultured in a phenol-free MEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum to express the Ras activity monitor protein. Forty-eight hours after transfection, the cultured cells were subjected to observation with a Timelabs fluorescence microscope.
- Such a microscope is equipped with a rotary fluorescence excitation filter device and a rotary fluorescence emission filter device (manufactured by LUDL electronic) and an inverted xenon light source equipped with a high-sensitivity cooled CCD camera (Photometrix, Micromax450).
- Type fluorescence microscope (Carl Zeiss, Axiovert 100).
- Metamorph image analysis software manufactured by Nippon Roper Co., Ltd. Using.
- the fluorescence excitation filter, fluorescence emission filter, and dichroic mirror were purchased from Omega.
- the cultured cells were irradiated with excitation light of 433 nm, an image of the fluorescence wavelength of the ECFP donor of 475 nm was taken with a CCD camera, and then an image of the fluorescence wavelength of the EYFP receptor of 530 nm was taken.
- the FRET efficiency at each measurement point was calculated by calculating the ratio of the fluorescence intensities of the two based on the image data.
- Mouse fibroblast NI H3T3 cells were cultured in DMEM medium (manufactured by Nissui Pharmaceutical) containing 10% fetal calf serum.
- the NIH 3 T3 cells obtained in Example 1 pRfrasl722 and vector pSV2neo (Genbank / EMBL: U02434) containing the G4 18 resistance gene were co-transfected using FuGene 6 (Nippon Roche).
- the cells were cultured in the above-mentioned medium, and after culturing for 48 hours, re-wound at a dilution ratio of 1:10, and G4 18 (Gibco — manufactured by BRL) was added to the medium to a concentration of 0.5 mgZml. .
- the medium was changed once every three days. After 2 weeks of culture, well separated colonies were cloned and named 3T3_Rafras cells.
- the 3T3-Rafras cells are cultured in a DMEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum and 0.5 mg / m1 of G418, and the Ras activity monitor protein is analyzed. Was expressed.
- the expression of such a protein was analyzed by the usual immunoblotting method using an anti-Ras antibody (Transduction Lab). As a result, expression of a protein of about 8.0 kDa was observed (Fig. 9).
- Example 3 Measurement of Rap A activation by Ra i _c hu 3 11
- sense primer hRapl Xh (5′-GGCTCGAGATGCGTGAGTACAAGCTAGTGG-3 ′) (SEQ ID NO: 13) and antisense primer Ra p 1 72Ra 1 GDS (5′-GCGGATGATACAGCAGTCGCCACCTCCGGATCCGCCGGTACCTCCACCACCGGTTCCACCTCCGGAGCCAT TGATCTTTGACTTTGCAGAAG-3 ′) (SEQ ID NO: 14)
- the corresponding cDNA portion was amplified.
- the sense primer hRap 1 Xh is the restriction enzyme Xh 0 It consists of the nucleotide sequence of the cleavage site of I and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence at positions 1 to 8 of Rap1A.
- the antisense primer Rap172Ra1GDS is composed of the amino terminal region (21) of the amino acid sequence of the Rap1A binding region of Ra1GDS (Genbank / EMBL accession number: U14417) from the 5 'end.
- Ra 1 GDS cDNA Genbank / EMBL endion number: U14417
- the sense primer Ra l GDS—F 5′-GGCGACTGCTGTATCATCCGC-3 ′) (SEQ ID NO: 15)
- the antisense primer Ra 1 Ra1 GDS cDNA was amplified by PCR using GDSR (5'-CGCGGCCGCCCCG CTTCTTGAGGACAAAGTC-3 ') (SEQ ID NO: 16) and the Pfx.
- the sense primer Ra1GDS-F has the nucleotide sequence of the cDNA portion corresponding to the amino terminal region (from position 211 to position 217) of the amino acid sequence of the Rap1A binding region of the cDNA of Ra1GDS.
- the antisense primer Ra 1 GDSR is composed of the base sequence of the cleavage site of the restriction enzyme N 0 ⁇ I underlined at the 5 ′ end and the carboxyl terminal region of the amino acid sequence of the Rap 1 A binding region of Ra 1 GDS ( 291 from position 1 to position 297), and the complementary nucleotide sequence of the nucleotide sequence of the cDNA portion.
- Rap 1A was synthesized by PCR using sense primer hRap1Xh and antisense primer Ra1GDSR and PfX.
- a cDNA consisting of a chimeric gene encoding Ra1GDS was amplified.
- the obtained DNA fragment was ligated to pCR-b1untII-TOPO, and the resulting plasmid construct was used to colonize the large intestine.
- the bacteria were transformed. After culturing such Escherichia coli, a plasmid was purified by a known alkaline SDS method.
- antisense primer GFP-d11R (5'-GGATCCGGTACCTCGAGGGCGGCGGTCACGAACTCCAGCAG-3 ') (SEQ ID NO: 17) was used instead of antisense primer GFP-N3.
- a similar operation was performed to prepare a vector containing cDNA encoding ECFP and EYFP which lacks 11 amino acids at the carboxyl terminus of the amino acid sequence. This vector was cut with XhoI and NotI. Next, the vector and the chimeric gene obtained in the above (1), which had been cut with XhoI and NotI, were ligated with T4 DNA ligase.
- the resulting plasmid was named pR ai -c hu 311.
- the structure of the obtained plasmid, the nucleotide sequence of its translated region (SEQ ID NO: 18) and the predicted amino acid sequence (SEQ ID NO: 19) are shown in FIGS. 11 and 12 to 14. Are shown below.
- nt 1-684 EYFP of the Jellyfish
- nt 1258-1515 Ra 1 GDS
- nt 1522-2235 Owan jellyfish ECFP
- Rap 1 A activity monitor protein (Ra i-chu 3 11) in mammalian cells and analysis by spectrophotometry
- Example 4 Measurement of R—Ras activation by Ra i-chu 158
- R—Ras cDNA (Genbank / EMBL accession number: M14948, 14949) was used as type III, and the sense primer RRas 28F (5′-CCCCTCGAGACACACAAGCTGGTGGTC-3 ′) (SEQ ID NO: 20) and antisense primer RRa Using s204R (5'-G CCGGTACCGCCACTGGGAGGGCTCGGTGGGAG-3 ') (SEQ ID NO: 21) and Pfx, a cDNA portion corresponding to the amino acid sequence from position 28 to position 204 of R-Ras by PCR method was amplified.
- the sense primer RRas28F is derived from the nucleotide sequence of the cleavage site of the restriction enzyme XhoI shown underlined at the 5 'end and the nucleotide sequence of the cDNA corresponding to the amino acid sequence from position 28 to position 33 of R-Ras. Become.
- the antisense primer RRas 204 R. corresponds to the spacer sequence containing the KpnI cleavage site (underlined) from the 5 'end, and the amino acid sequence from position 198 to position 204 of R-Ras. It consists of the base sequence of the complementary strand of the cDNA portion.
- the PCR product obtained in the above (i) was cut with XhoI and KpnI.
- PR afras 1 722 obtained in Example 1 was completely digested with XhoI and then partially digested with Kpn. I to obtain a DNA fragment from which the Ras portion had been removed.
- the DNA fragment and the DNA fragment obtained in (ii) were ligated with T4 DNA ligase.
- the resulting plasmid was named pRa i-chu 158.
- the structure of the plasmid, the nucleotide sequence in its translation region (SEQ ID NO: 22) and the predicted amino acid The acid sequence (SEQ ID NO: 23) is shown in FIG. 16 and FIGS. 17 to 19, respectively. Illustrating such a base sequence and the predicted amino acid sequence:
- nt 1-717 EYFP of the Jellyfish
- nt 1510-2220 Owan jellyfish ECFP
- the antisense primer RaSI36LR has the sequence of the cDNA portion corresponding to the amino acid sequence from position 35 to position 42 of Ras, and the underlined portion indicates that the I 1 e It has a mutation. This mutation makes Ras activity temperature sensitive. Is known (Ref. 8).
- the sense primer RasI36LF (5'-CGACCCCACTCTAGAGGATTCC-3 ') (SEQ ID NO: 25) and the antisense primer -Ras172Raf (see Example 1)
- the antisense primer -Ras172Raf see Example 1
- the obtained two DNA fragments were mixed, and PCR was carried out using the sense primer hRasXh and the antisense primer Ras172Raf in the same manner as described above, corresponding to positions 1 to 172 of the amino acid sequence of Ras. And a DNA containing a point mutation of I1e36 to Leu was amplified.
- the PCR product was cut with XhoI and KpnI.
- pRafrasl722 obtained in Example 1 was completely digested with XhoI and then partially digested with KpnI to obtain a DNA fragment from which Ras was removed.
- the DNA fragment and the DNA fragment obtained in (ii) were ligated with T4 DNA ligase.
- the resulting plasmid was named pRai-chu119.
- the nucleotide sequence (SEQ ID NO: 26) and the predicted amino acid sequence (SEQ ID NO: 27) in the translation region of the plasmid are shown in FIGS. 21 to 23, respectively.
- monitor protein Ra i- c hu 119
- HEK293 T cells derived from human fetal kidney were cultured in a DMEM medium (manufactured by Mizu Seiyaku) containing 10% fetal serum.
- the HEK 293 T cells were transfected with the pRafras 1722 or pRa i-chu 119 prepared in Example 1 and a guanine nucleotide exchange factor Sos expression vector (pCAGGS_mSos) by a phosphoric acid lupus method. did. After culturing for 24 hours in the same medium, the cells were transferred to an incubator at 33 ° C and 40 ° C, and further cultured for 24 hours.
- the supernatant was collected by centrifugation at 100,000 xg.
- pRafras 1722 obtained in Example 1 was digested with restriction enzymes SpE I and BamHI, subjected to agarose gel electrophoresis, and a promoter, an intron, a coding sequence, a polysequence of about 4.5 kb was obtained. A DNA fragment of the region containing the A addition signal was obtained. After removing the DNA from the gel by electroelution, use a Qiagen20 chip
- This DNA was injected into the pronucleus of a mouse fertilized egg (DB Fl, Japan SLC) according to a standard method, and transplanted into the oviduct of a pseudopregnant ICR mouse (Japan SLC). After weaning of the obtained mouse, the tail was cut 1 cm, and kept overnight at 37 ° C. in a DNA extract containing P-tinase K (ABI). From here, phenol and phenol After removing the protein with form, an equal volume of isopropanol was added to recover the precipitated DNA. The recovered DNA was put in water and dissolved at 37 ° C.
- the F1 mouse was bred to a C57 / Black mouse (Japan SLC).
- the ventricle was taken from a newborn F2 mouse (0 day old) and minced with ophthalmic scissors.
- PBS containing 0.05% trypsin and 0.5 mM EDTA was added, the cells were treated at 37 ° C for 10 minutes, and the isolated cardiomyocytes were collected. This operation was repeated six times, and cardiomyocytes were collected.
- a DMEM medium containing 10% fetal calf serum, and cardiomyocytes were precipitated by low-speed centrifugation, and the supernatant was discarded.
- the recovered cardiomyocytes were cultured in DMEM containing 10% fetal calf serum.
- FIG. 25 shows the results of the change over time in the fluorescence intensity of ECFP and EYFP in the cells upon addition of EGF. It was confirmed that the activation of Ras can be measured in an EGF-dependent manner even in primary cultured cells derived from transgenic mice.
- Example 7 Specificity of Raf rasl722 for guanine nucleotide exchange factor and GTP hydrolysis enzyme
- GAPlm a GTP water-degrading enzyme for Ras
- FRET efficiency for some RTPases, R-RasGAP and raplGAPII, for R-Ras and Rapl can be reduced Drop Absent.
- guanine nucleotide exchange factors for Ras such as mSosl, RasGRF, and CalDAG-GEFI I increase FRET efficiency, but guanine nucleotide exchange using other Ras family G proteins such as CalDAG-GEFI, C3G, PDZ-GEF1, and KIAA0351 as substrates. FRET efficiency did not increase for some factors.
- Rafrasl722 is specifically regulated in its FRBT efficiency by the same guanine nucleotide exchange factor and GTP hydrolysis enzyme as Ras.
- Example 8 Preparation of Rai-chu404, a Rap1 monitor, and its specificity for guanine nucleotide exchange factor and GTP hydrolysis enzyme
- a known amino acid substitution (Thr66Gly; Val69Leu; Ser73Ala; Metl54Thr; Vall64Ala; Serl76Gly; Thr204Tyr) in which known EGFP (Genbank / EBL accession number: U76561) has been replaced with seven amino acids by a known method using PCR.
- known EGFP Genebank / EBL accession number: U76561
- the Kpnl / NotI fragment containing the Raf region of Rafrasl722 was replaced with a Kpnl / Notl fragment containing the RalGDS region of the plasmid derived from pRai-chu311.
- This vector was named pRaichu404.
- the base sequence of the translation region is shown as SEQ ID NO: 30 and the amino acid sequence predicted from the base sequence is shown as S
- Example 1 ECFP was amplified using a primer (SEQ ID NO: 32) containing a recognition site of a restriction enzyme Xbal instead of the antisense primer XFP-Bg1, and the method described in (Reference 11) was used. Then, the CAAX box of Ki-Ras protein was fused to the carboxyl terminus of ECFP. This was replaced by the method using Rafrasl722 and Rai-chu404 ECFP, restriction enzymes and T4 ligase. The resulting vectors were named pRai-chulOIX and pRai-chu404X, respectively.
- FIG. 28 shows the results of the change over time in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of EGF.
- a high fluorescence ratio is shown in red and a low fluorescence ratio is shown in blue, and the diagram is presented using the IMD mode in which the fluorescence intensity of ECFP is expressed as lightness.
- the red area indicates the site where Ras or Rapl activation is high.
- Ras was activated from the periphery of cells by stimulation with cell growth factor, and Rapl was activated from the perinuclear area.
- Rapl was activated from the perinuclear area.
- the use of the active protein protein of the present invention allows intracellular Ras-amily G-tannos. Temporal and spatial information on the activity of the protein can be obtained.
- Example 11 1 Visualization of Ras activation in PC12 cells expressing Rai-chulOIX and Rai-chu404X
- FIG. 30 shows the results of the time-dependent changes in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of nerve growth factor.
- the part with high fluorescence ratio is shown in red and the part with low fluorescence ratio is shown in blue, and the figure is presented using IMD mode, which shows the fluorescence intensity of ECFP as brightness.
- the red area indicates the site where Ras or Rapl activation is high.
- Ras is activated from the periphery in the cell body during the induction phase of differentiation, whereas Ras activity required for cell survival is obtained at the completion of differentiation. was found to be maintained only in neurites.
- Ra s occurred at different sites in the cell depending on the stage of cell differentiation.
- Rapl was activated by the addition of nerve growth factor from the perinuclear region, and its activity in differentiated neurites was found to be low. This indicates that the activity of Ras family G proteins is regulated differently in different parts of the cell.
- Example 1 2 Preparation of Rai-chulOlIX, which is an activity monitor of Ra c 1 activity protein (1) Preparation of chimeric gene encoding Ra c 1 and Pak 1
- nt 1-684 Owan jellyfish EYFP
- Ra c 1 activity monitor protein Rai-chulOllX
- nt 1-684 Owan jellyfish EYFP
- the plasmid was prepared by the PCR method according to the method of Example 1.
- De pRai-chul214X was obtained.
- the structure of pRai-chul214X (FIG. 33), the nucleotide sequence of its translated region (SEQ ID NO: 41) and the predicted amino acid sequence (SEQ ID NO: 42) are shown.
- nt 1-684 Owan jellyfish EYFP
- nt 697-1092 mD i a 1
- Rh 0 A activity monitor protein (Rai-chul214X) in mammalian cells and analysis by spectrophotometer
- Example 15 Rai-chulOllX and! Visualization of Rac1 activation in C0S1 cells expressing ai-chul054X
- FIG. 37 shows the results of the change over time in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of EGF.
- Rac 1 is rapidly activated in the whole cell within 1 minute by EGF stimulation, and the activation converges to a part where the cell membrane is moving, called ruffling at the cell margin. I was able to observe how it was being done.
- SEQ ID NO: 1 is the nucleotide sequence of the restriction enzyme Xh0I cleavage site and that of human H-Ras. This is the base sequence of the primer designed based on the base sequence.
- SEQ ID NO: 2 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human c-Raf 1 and the nucleotide sequence of human H-Ras.
- SEQ ID NO: 3 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a cleavage site of restriction enzyme KpnI and a nucleotide sequence of human c-Raf1.
- SEQ ID NO: 4 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme N0tI and the nucleotide sequence of human c-Raf1.
- SEQ ID NO: 5 is a nucleotide sequence of a primer designed based on the nucleotide sequence on the 5 ′ side of the Martinburg roning site of pB1uescript—SKIII (+).
- SEQ ID NO: 6 is a nucleotide sequence of a primer designed based on the nucleotide sequence on the 3 ′ side of the Martinburg roning site of pB1uescript—SKIII (+).
- SEQ ID NO: 7 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme BamHI and the nucleotide sequence of EYFP.
- SEQ ID NO: 8 is a nucleotide sequence of a primer designed based on the nucleotide sequence of each cleavage site of restriction enzymes BamHI, KpnI, and XhoI and the nucleotide sequence of ECFP.
- SEQ ID NO: 9 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Not I and the nucleotide sequence of ECFP.
- SEQ ID NO: 10 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a cleavage site of restriction enzyme BglII and a nucleotide sequence of ECFP.
- SEQ ID NO: 11 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H-Ras, human c-Rayl, EYFP and ECFP.
- SEQ ID NO: 12 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 11.
- SEQ ID NO: 13 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Xh0I and the nucleotide sequence of human Rap1A.
- SEQ ID NO: 14 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human Ra 1 GDS and the nucleotide sequence of human Rap 1A.
- SEQ ID NO: 15 is a nucleotide sequence of one primer designed based on the nucleotide sequence of human Ra1 GDS.
- SEQ ID NO: 16 is the nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme N0tI and the nucleotide sequence of human Ra1GDS.
- SEQ ID NO: 17 is a nucleotide sequence of a primer designed based on the nucleotide sequence of each cleavage site of restriction enzymes BamHI, KpnI and XhoI and the nucleotide sequence of ECFP.
- SEQ ID NO: 18 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human Rap1A, human Ra1GDS, EYFP and ECFP.
- SEQ ID NO: 19 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 18.
- SEQ ID NO: 20 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Xh0I and the nucleotide sequence of human R-Ras.
- SEQ ID NO: 21 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme KpnI and the nucleotide sequence of human R_Ras.
- SEQ ID NO: 22 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human R-Ras, human c-Rafl, EYFP and ECFP.
- SEQ ID NO: 23 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 22.
- SEQ ID NO: 24 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human H-Ras.
- SEQ ID NO: 25 is a primer designed based on the nucleotide sequence of human H-Ras Is the base sequence.
- SEQ ID NO: 26 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H-Ras, human c-Rafl, EYFP and ECFP.
- SEQ ID NO: 27 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 26.
- SEQ ID NO: 28 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a human H—Ras binding region of human c-Rafl.
- SEQ ID NO: 29 is a nucleotide sequence of a primer designed based on the nucleotide sequence of ECFP.
- SEQ ID NO: 30 is a plasmid base sequence designed based on each base sequence of human Rap1A, human c-Raf1, EYFP and ECFP.
- SEQ ID NO: 31 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 30.
- SEQ ID NO: 32 is a nucleotide sequence of a primer designed based on the nucleotide sequence of ECFP.
- SEQ ID NO: 33 is given as a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H_Ras, human c_Rafl, EYFP.ECFP and human K-Ras.
- SEQ ID NO: 34 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 33.
- SEQ ID NO: 35 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human RaplA, human c-Rafl, EYFP.ECFP and human K-Ras.
- SEQ ID NO: 36 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 35.
- SEQ ID NO: 37 is a fragment of human Ra cl, human Pak l, EYFP. This is a plasmid base sequence designed based on each base sequence of human K-Ras.
- SEQ ID NO: 38 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 37.
- SEQ ID NO: 39 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human Cdc42, human Pak1, EYFP, ECFP, and human K-Ras.
- SEQ ID NO: 40 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 39.
- SEQ ID NO: 41 is a base sequence of a plasmid designed based on each base sequence of human RhoA, human mDia1, EYFP, ECFP, and human K-Ras
- SEQ ID NO: 42 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 41.
- an activity monitor protein of a low-molecular-weight GTP-binding protein capable of measuring the activation of a non-invasive low-molecular-weight GTP-binding protein, a non-invasive low-molecular-weight GTP-binding protein expressing the protein Cells and transgenic animals useful for measuring protein activation, methods for measuring the activation of low-molecular-weight GTP-binding proteins using the proteins, and more specifically, low-molecular-weight GTP-binding proteins that can be used in living cells
- the present invention provides a method for measuring the amount ratio of GTP-bound to GDP-bound, and a method for screening a low-molecular-weight GTP-binding protein activity modulator.
Landscapes
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Medicinal Chemistry (AREA)
- Genetics & Genomics (AREA)
- Gastroenterology & Hepatology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biochemistry (AREA)
- Biophysics (AREA)
- General Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Zoology (AREA)
- Toxicology (AREA)
- Immunology (AREA)
- Cell Biology (AREA)
- Oncology (AREA)
- Peptides Or Proteins (AREA)
- Investigating Or Analysing Biological Materials (AREA)
Abstract
Description
明 細 書 低分子量 GTP結合タンパク質の活性モニタータンパク質 技術分野 Description Activity monitoring protein for low molecular weight GTP-binding protein
本発明は、 低分子量 GTP結合タンパク質の活性モニタ一タンパク質、 該タン パク質をコードする遺伝子、 該遺伝子を含む発現ベクター、 該発現ベクターを保 持する形質転換された細胞およびトランスジエニック動物、 前記タンパク質を用 いる低分子量 GTP結合夕ンパク質の活性化を測定する方法、 ならびに低分子量 GTP結合タンパク質の活性調節物質のスクリーニング方法に関する。 背景技術 The present invention relates to a protein for monitoring the activity of a low molecular weight GTP-binding protein, a gene encoding the protein, an expression vector containing the gene, transformed cells and a transgenic animal carrying the expression vector, The present invention relates to a method for measuring the activation of a low-molecular-weight GTP-binding protein using a protein, and a method for screening a substance for regulating the activity of a low-molecular-weight GTP-binding protein. Background art
細胞内情報伝達分子には非常に多くの種類が知られており、 低分子量 GTP結 合タンパク質 (以下、 GTP結合タンパク質という場合がある) はその中でも種 類が多いこと、 重要な分子スィッチとして働いていることから非常に詳しく解析 されてきている。 低分子量 GTP結合タンパク質群は R a sファミリ一、 Rh 0 ファミ リー、 R a bファミ リ一、 R a nファミ リ一などからなる (文献 1 ) 。 こ れらの低分子量 GTP結合タンパク質は、 細胞増殖、 細胞骨格、 細胞内輸送、 核 輸送など細胞内での多様な情報伝達を制御する重要な分子スィツチである。 低分 子量 GTP結合タンパク質は、 GDPに結合している不活性化型と G T Pに結合 している活性化型との間をサイクルしている (第 1図) 。 GTP結合型はそれぞ れの GTP結合タンパク質に特異的な標的タンパク質に結合し、 該標的タンパク 質を活性化する。 G D P結合型を G T P結合型にする反応を触媒するタンパク質 はグァニンヌクレオチド交換因子であり、 GTP結合型を GDP結合型に戻す反 応を触媒するタンパク質は G TP水解促進酵素 (GTPァーゼ活性化因子) であ る。 該 GTP水解促進酵素は、 結合した G TPの加水分解を促進し、 無機リン酸 を遊離させて GDPを生じさせるように働く。 Numerous types of intracellular signaling molecules are known, and low-molecular-weight GTP-binding proteins (hereinafter sometimes referred to as GTP-binding proteins) are numerous and serve as important molecular switches. Therefore, it has been analyzed in great detail. The low molecular weight GTP-binding proteins are composed of the Ras family, the Rh0 family, the Rab family, the Ran family, etc. (Reference 1). These low-molecular-weight GTP-binding proteins are important molecular switches that control diverse intracellular signal transduction such as cell proliferation, cytoskeleton, intracellular transport, and nuclear transport. Low molecular weight GTP-binding proteins cycle between an inactivated form that binds to GDP and an activated form that binds to GTP (Figure 1). The GTP-binding form binds to a target protein specific to each GTP-binding protein and activates the target protein. The protein that catalyzes the reaction of converting GDP-linked to GTP-linked is a guanine nucleotide exchange factor, and the protein that catalyzes the reaction of converting GTP-linked to GDP-linked is GTPase-activating enzyme (GTPase activator). ). The GTP hydrolysis promoter promotes the hydrolysis of bound GTP, And works to generate GDP.
最近、 多くの低分子量 GTP結合タンパク質およびその活性化因子と不活性化 因子が単離されるにおよび、 これら低分子量 G T P結合タンパク質が細胞内およ び個体内でどのような機能的差異があるのかに注目が集まっている。 その機能的 差異を明らかにするためには、 細胞内および個体内での低分子量 GTP結合タン パク質の活性化状態をモニターする必要がある。 Recently, as many small GTP-binding proteins and their activators and inactivators have been isolated, what are the functional differences between these small GTP-binding proteins in cells and in individuals? Is attracting attention. To clarify the functional differences, it is necessary to monitor the activation status of low-molecular-weight GTP-binding proteins in cells and individuals.
細胞内での低分子量 G T P結合タンパク質の活性化の程度を調べるには、 細胞 内での低分子量 G T P結合タンパク質の G T P結合型と G D P結合型の量比を知 る必要がある。 現在、 細胞内での低分子量 GTP結合タンパク質の GTP結合型 と GDP結合型の量比を調べる方法としては次の二つがよく用いられている。 In order to examine the degree of activation of the low molecular weight GTP binding protein in the cell, it is necessary to know the ratio of the GTP binding type to the GDP binding type of the low molecular weight GTP binding protein in the cell. At present, the following two methods are often used to determine the ratio of GTP-bound to GDP-bound low-molecular-weight GTP-binding proteins in cells.
(1) ラジオアイソトープ32 P iによる標識を利用する方法:細胞を32 P iで 標識したのち低分子量 GTP結合タンパク質を精製し、 結合している GTPおよ び GDPを薄層クロマトグラフィーにて分離し定量する (文献 2)。 (1) How to use the labeling with radioisotopes 32 P i: Cells 32 P i a low molecular weight GTP-binding protein then labeled and purified, the separated GTP and GDP bound by thin layer chromatography And quantify (Reference 2).
( 2 ) プルダウン法:低分子量 GT P結合夕ンパク質に結合する標的夕ンパク 質を固層に結合させておき、 可溶化した細胞抽出液と混合する。 GTP結合型の ものは標的タンパク質に高いァフィ二ティ一で結合するので、 G TP結合型のみ を選択的に回収することができる。 これを、 SDS— PAGEゲルにて分離した 後に、 ィムノブロッテイングにて定量する (文献 3)。 しかしながら、 いずれの 方法も細胞を一旦可溶化する必要があり、 生細胞で直接、 低分子量 GTP結合夕 ンパク質の活性化を調べる方法はこれまでなかった。 (2) Pull-down method: A target protein that binds to a low-molecular-weight GTP-bound protein is bound to a solid layer, and mixed with a solubilized cell extract. Since the GTP-bound form binds to the target protein with high affinity, only the GTP-bound form can be selectively recovered. After this is separated on an SDS-PAGE gel, it is quantified by immunoblotting (Reference 3). However, all methods require the cells to be solubilized once, and there has been no method to directly examine the activation of low-molecular-weight GTP-bound proteins in living cells.
細胞内には、 細胞膜、 細胞質以外にも多くの細胞内小器官が存在するだけでな く、 細胞質の中でも異なる場所では異なる生化学的現象が起きていることが近年 明らかにされている。 また、 個体レベルでも低分子量 GTP結合タンパク質が高 次神経機能や器官形成に非常に重要であるということがわかっている。 したがつ て、 低分子量 GTP結合タンパク質の活性化状態を細胞内あるいは個体内で非侵 襲的に知ることは、 生命現象の理解のみならず、 薬剤開発などにおいても必須で ある。 しかし、 これまでの生化学的方法では細胞を可溶化してしまうため、 細胞 内のどの場所で低分子量 G T P結合タンパク質が活性化されているのか、 また、 どの細胞で低分子量 G T P結合タンパク質が活性化されているのかを知ることは できなかった。 In recent years, it has been revealed that not only many cellular organelles exist in cells besides the cell membrane and cytoplasm, but also different biochemical phenomena occur in different places in the cytoplasm. It has also been shown that, at the individual level, low-molecular-weight GTP-binding proteins are very important for higher nerve function and organ formation. Therefore, non-invasive knowledge of the activation state of a low-molecular-weight GTP-binding protein in cells or individuals is essential not only for understanding biological phenomena but also for drug development. is there. However, since conventional biochemical methods solubilize cells, where in the cells the small GTP-binding protein is activated, and in which cells the small GTP-binding protein is active It was not possible to know if it had been converted.
一方、 生細胞においてタンパク質を可視化する技術としては GFP (green fl uorescent protein ) を用いる方法が知られている (文献 4)。 GFPは発光ク ラゲなどより単離されるタンパク質群で、 主に緑色の蛍光を発するタンパク質で ある。 現在、 細胞内でのタンパク質の局在を調べるのに広く用いられている。 G FPとしては CFP (cyan-emitting mutant of GFP)、 YFP (yel low-emit t ing mutant of GFP)などがあり、 また、 それらを改良したタンパク質として E GFP (enhanced green fluorescent protein)、 ECFP (enhanced CFP)、 EYFP (enhanced YFP)、 EBFP (enhanced blue-emitting mutant of GFP ) など (本明細書において、 これらをまとめて GFP関連タンパク質という) が ある。 これらは、 それぞれ異なる波長の光で励起され、 異なる波長の蛍光を放出 する。 On the other hand, as a technique for visualizing proteins in living cells, a method using GFP (green fluorescent protein) is known (Reference 4). GFP is a group of proteins isolated from luminescent jellyfish and other proteins that emit mainly green fluorescence. Currently, it is widely used to investigate the localization of proteins in cells. GFPs include CFP (cyan-emitting mutant of GFP) and YFP (yellow-emitting mutant of GFP), and improved proteins such as EGFP (enhanced green fluorescent protein) and ECFP (enhanced green fluorescent protein) CFP), EYFP (enhanced YFP), EBFP (enhanced blue-emitting mutant of GFP) and the like (in the present specification, these are collectively referred to as GFP-related proteins). Each of these is excited by light of a different wavelength and emits fluorescence of a different wavelength.
さらに GFPを応用した技術として FRET (fluorescent resonance energy transfer ) を用いるものがある (文献 5)。 F R E Tとは以下の現象を指す。 蛍光物質 Aおよび Bという物質がそれぞれ; laexおよび; Ibexで励起され、 ;iae raおよび; Ibemの光をそれぞれ発光するとする。 この時、 Aおよび Bがごく近傍 に存在し、 ; emが; exに充分に近い時、 Aおよび Bの混合物に λ&βχの光を 照射すると、 物質 Αのエネルギーが Βに吸収され; Ibemの発光が観察される。 こ れを FRETという。 この方法を利用して、 2分子間の距離を推定することもで きる。 この時、 蛍光物質 Aをドナ一、 蛍光物質 Bをァクセプタ一という。 Further, there is a technology using FRET (fluorescent resonance energy transfer) as a technology applying GFP (Reference 5). F R E T refers to the following phenomena. It is assumed that fluorescent substances A and B are excited by laex and Ibex, respectively, and emit light of iae ra and Ibem, respectively. At this time, when A and B are very close to each other; when em is sufficiently close to ex, when the mixture of A and B is irradiated with light of λ & β エ ネ ル ギ ー, the energy of the substance Α is absorbed by I; Is observed. This is called FRET. Using this method, the distance between two molecules can also be estimated. At this time, the fluorescent substance A is called donor and the fluorescent substance B is called receptor.
さらにこの技術の応用として、 二つの蛍光物質を一つのタンパク質内に標識す ることにより、 タンパク質の構造変化を検出することが可能である。 EBFPお よび EGFP、 ECFPおよび EYFPの 2セットの G F P関連タンパク質は、 至適な F R E Tのためのドナーとァクセプターの組み合わせを作ることが知られ ている。 たとえば、 EBFPと EGFPとの二つのタンパク質とカルシウム結合 タンパク質カルモジュリンとの融合タンパク質で、 この FRET技術を応用して カルシウムの濃度を測りうることが知られている (文献 6) 。 しかしながら、 G FPタンパク質と FRET技術とを応用した 1分子モニタ一による測定法は、 前 記カルシウム測定ならびにサイクリック AMP依存性リン酸化酵素の活性測定以 外には、 現時点では成功していない。 発明の開示 Furthermore, as an application of this technology, it is possible to detect protein structural changes by labeling two fluorescent substances within one protein. Two sets of GFP-related proteins, EBFP and EGFP, ECFP and EYFP, It is known to make donor and receptor combinations for optimal FRET. For example, it is known that the concentration of calcium can be measured by applying this FRET technology to a fusion protein of two proteins, EBFP and EGFP, and the calcium-binding protein calmodulin (Reference 6). However, the measurement method using a single-molecule monitor applying the GFP protein and FRET technology has not been successful at present except for the aforementioned calcium measurement and the measurement of the activity of cyclic AMP-dependent kinase. Disclosure of the invention
本発明は、 非侵襲的な低分子量 G TP結合タンパク質の活性化の測定を可能に する低分子量 GTP結合タンパク質の活性モニタ一タンパク質;該タンパク質を コ一ドする遺伝子;該遺伝子を含む発現ベクター;前記タンパク質を発現し、 非 侵襲的な低分子量 GTP結合タンパク質の活性化の測定に有用な前記発現べクタ ―を保持する形質転換された細胞およびトランスジエニック動物;前記タンパク 質を用レ、る低分子量 G T P結合タンパク質の活性化を測定する方法、 より詳しく は生細胞においても使用可能な、 低分子量 GTP結合タンパク質の GTP結合型 と G D P結合型の量比を測定する方法;ならびに低分子量 G T P結合タンパク質 の活性調節物質のスクリーニング方法を提供することを目的とする。 The present invention relates to a protein for monitoring the activity of a low-molecular-weight GTP-binding protein, which enables non-invasive measurement of the activation of a low-molecular-weight GTP-binding protein; a gene encoding the protein; an expression vector containing the gene; Transformed cells and transgenic animals carrying the expression vector that express the protein and are useful for measuring the activation of non-invasive low molecular weight GTP-binding proteins; and the use of the protein. A method for measuring the activation of a low-molecular-weight GTP-binding protein, more specifically, a method for measuring the amount ratio of GTP-binding to GDP-binding low-molecular-weight GTP-binding protein that can be used in living cells; and low-molecular-weight GTP-binding It is an object of the present invention to provide a method for screening a protein activity modulator.
すなわち、 本発明の要旨は、 That is, the gist of the present invention is:
〔1〕 低分子量 GTP結合タンパク質の全部または一部、 該低分子量 GTP結 合夕ンパク質の標的タンパク質の全部または一部、 GF Pァクセプ夕一タンパク 質の全部または一部、 及び GFPドナ一タンパク質の全部または一部が、 各タン パク質の機能を発揮し得る状態で直接または間接的に連結されてなる融合タンパ ク質からなる低分子量 GTP結合タンパク質の活性モニタ一タンパク質、 [1] All or part of the low-molecular-weight GTP-binding protein, all or part of the target protein of the low-molecular-weight GTP-binding protein, all or part of the GFP protein, and GFP donor protein All or a part of the activity monitor of a low molecular weight GTP binding protein consisting of a fusion protein directly or indirectly linked in a state capable of exerting the function of each protein,
〔2〕 前記 〔1〕 記載の低分子量 GTP結合タンパク質の活性モニタータンパ ク質をコードする遺伝子、 〔 3〕 前記 〔 2〕 記載の遺伝子を含む発現べクタ一、 (2) a gene encoding the activity monitor protein of the low-molecular-weight GTP-binding protein according to (1), (3) an expression vector containing the gene according to (2),
〔4〕 前記 〔3〕 記載の発現ベクターを保持してなる形質転換された細胞、 (4) a transformed cell holding the expression vector according to (3),
〔5〕 前記 〔3〕 記載の発現べクタ一を保持してなるトランスジ ニック動物 [5] a transgenic animal carrying the expression vector according to the above [3]
〔6〕 前記 〔1〕 記載の低分子量 GTP結合タンパク質の活性モニタ一タンパ ク質における F R E Tを検出する工程を含む低分子量 G T P結合夕ンパク質の活 性化を測定する方法、 (6) a method for measuring activation of a low-molecular-weight GTP-binding protein, comprising a step of monitoring FRET in the activity monitor protein of the low-molecular-weight GTP-binding protein according to (1),
〔7〕 前記 〔4〕 記載の細胞または前記 〔5〕 記載のトランスジ ニック動物 における F R E Tを検出する工程を含む低分子量 G T P結合タンパク質の活性化 を測定する方法、 ならびに (7) a method for measuring activation of a low-molecular-weight GTP-binding protein comprising a step of detecting FRET in the cell according to (4) or the transgenic animal according to (5), and
〔8〕 (a)前記 〔4〕 記載の細胞と被検物質とを接触させる工程、 および ( b )低分子量 G T P結合タンパク質の活性の変化を検出する工程、 (8) (a) contacting the test substance with the cell according to (4), and (b) detecting a change in activity of the low-molecular-weight GTP-binding protein,
を含む、 低分子量 GTP結合タンパク質の活性調節物質のスクリーニング方法、 に関する。 図面の簡単な説明 And a method of screening for an activity modulator of a low-molecular-weight GTP-binding protein. BRIEF DESCRIPTION OF THE FIGURES
第 1図は、 低分子量 GTP結合タンパク質の活性制御機構を示す。 本図では、 低分子量 GTP結合タンパク質として Ra sを例にとり、 低分子量 GTP結合夕 ンパク質の活性制御機構を模式的に示してある。 低分子量 GTP結合タンパク質 は G D Pに結合していると不活性化型であり、 ここにグァニンヌクレオチド交換 因子 (GEF)が作用すると GDPが GTPに置換され、 活性化型となる。 活性 化された G T P結合夕ンパク質は構造変化を起こレ、 その特異的な標的タンパク 質と結合し、 それを活性化できるようになる。 活性化型の低分子量 GTP結合夕 ンパク質は G TP水解促進酵素 (GAP)存在下に GTPが GDPに水解され、 無機リン酸 (P i) を遊離し、 もとの不活性化型に戻る。 FIG. 1 shows a mechanism for controlling the activity of a low molecular weight GTP-binding protein. In this figure, Ras is taken as an example of a low molecular weight GTP-binding protein, and the activity control mechanism of the low molecular weight GTP-binding protein is schematically shown. The low molecular weight GTP-binding protein is inactive when bound to GDP, and when guanine nucleotide exchange factor (GEF) acts on it, GDP is replaced by GTP and becomes activated. The activated GTP-binding protein undergoes a conformational change, binds to its specific target protein, and becomes able to activate it. Activated low molecular weight GTP-bound protein is hydrolyzed to GDP in the presence of GTP hydrolyzing enzyme (GAP), releasing inorganic phosphate (Pi) and returning to its inactive form .
第 2図は、 FRE Tを利用した低分子量 G T P結合夕ンパク質の活性化測定法 の原理を示す。 この図では低分子量 GTP結合タンパク質として R a sを、 標的 タンパク質として R a fを例にとっている。 GFPドナータンパク質として例示 する CFP(cyan- emitting mutant of GFP) は 433 nmの光で励起され、 47 5 nmを極大とする光を放射する。 一方、 GFPァクセプタータンパク質として 例示する YF P (yellow- emitting mutant of GFP) は 505 nmの光で励起され 530 nmを極大とする光を放射する。 なお、 本発明においては、 GFPァクセ プタ—タンパク質および/または GFPドナ一タンパク質として、 これらを用い ることもできる。 第 2図中の下図に示すように、 Ra sの活性化前には、 モニタ —タンパク質において、 ァミノ末端側に存在する YF Pとカルボキシル末端側に 存在する C F Pとが離れているので C F Pから Y F Pへのエネルギーの移行はあ まり起きない。 ところが、 何らかの刺激を受けて 〔たとえば、 上皮細胞増殖因子 (EGF) の添加〕 R a sが活性化型になると、 標的タンパク質 R a f の R a s 結合領域 (RBD) に結合するので、 とじ ?が近傍に来て、 その結果、 CFPから YFPへのエネルギーの移行、 それに伴う YFPからの 530 nmの 蛍光が観察されるようになる。 従って、 刺激前後 (すなわち、 Ra sの活性化前 後) における FRET効率を測定することにより、 Ra sの活性化を測定するこ とができる。 Fig. 2 shows a method for measuring the activation of GTP-bound protein with low molecular weight using FRET. The principle of is shown. In this figure, Ras is taken as an example of a low molecular weight GTP-binding protein, and Raf is taken as an example of a target protein. CFP (cyan-emitting mutant of GFP) exemplified as a GFP donor protein is excited by light at 433 nm and emits light having a maximum at 475 nm. On the other hand, YFP (yellow-emitting mutant of GFP) exemplified as a GFP receptor protein is excited by light at 505 nm and emits light having a maximum at 530 nm. In the present invention, these can also be used as GFP receptor protein and / or GFP donor protein. As shown in the lower diagram in Fig. 2, before the activation of Ras, the monitor—in the protein, the YFP at the amino terminal and the CFP at the carboxyl terminal are separated, so that There is little energy transfer to the country. However, when some kind of stimulus is received [for example, the addition of epidermal growth factor (EGF)], Ras becomes activated and binds to the Ras-binding domain (RBD) of the target protein Raf. Comes to the vicinity, and as a result, the energy transfer from CFP to YFP and the accompanying 530 nm fluorescence from YFP are observed. Therefore, the activation of Ras can be measured by measuring the FRET efficiency before and after stimulation (ie, before and after the activation of Ras).
第 3図は、 プラスミ ド pRa f r a s 1 722の構造を示す。 発現ベクターは すでに報告されている PCAGGSを用いた。 図中の C AGプ α乇一夕一の下流 に EYFP— Ra s _Ra f RBD (Ra s結合領域) 一 ECFPの順となる融 合タンパク質をコ一ドする c DNAを結合した。 FIG. 3 shows the structure of plasmid pRafras1722. The expression vector used was PCAGGS, which has already been reported. In the figure, EYFP—Ras_RafRBD (Ras binding region) —a cDNA coding for the fusion protein in the order of ECFP was bound downstream of the CAG site α 乇.
第 4図は、 プラスミ ド pRa f r a s 1 722の翻訳領域の塩基配列および予 測されるアミノ酸配列を示す。 FIG. 4 shows the nucleotide sequence and predicted amino acid sequence of the translation region of plasmid pRafras1722.
第 5図は、 プラスミ ド pRa f r a s 1 722の翻訳領域の塩基配列おょぴ予 測されるアミノ酸配列 (つづき) を示す。 FIG. 5 shows the nucleotide sequence of the translation region of plasmid pRafras1722 and the predicted amino acid sequence (continued).
第 6図は、 プラスミ ド p R a f r a s 1 722の翻訳領域の塩基配列および予 測されるアミノ酸配列 (つづき) を示す。 Figure 6 shows the nucleotide sequence and prediction of the translation region of plasmid p Rafras1722. Indicates the measured amino acid sequence (continued).
第 7図は、 発現タンパク質 R a f r a s 1722の蛍光プロフィールを示す。 HEK 293丁細胞に 1^& f r a s 1 722とグァニンヌクレオチド交換因子 So s発現べクタ一 (pCAGGS— mSo s) あるいは GT P水解促進酵素 G a p lm発現ベクター (pEF— Bo s— Gap lm) をリン酸カルシウム法に てトランスフエクトし、 48時閭培養後に細胞を可溶化し、 遠心分離後、 上清を 得た。 該上清について励起波長 433 nmにて、 波長 450 nm〜 550 nmに おける蛍光強度を蛍光分光光度計にて測定した。 第 7図に示すグラフの右囲みに おける So sは pRa f r a s 1 722と pCAGGS— mSo sを共にトラン スフェクトした場合における R a f r a s 1722の蛍光プロフィールであるこ とを、 Gap lmは pRa f r a s 1722と pEF— Bo s— Gap 1 mを共 にトランスフエクトした場合における R a f r a s 1722の蛍光プロフィール であることを示す。 FIG. 7 shows the fluorescence profile of the expressed protein Rafras 1722. HEK 293 cells were transfected with 1 ^ & fras 1 722 and guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos) or GTP hydrolytic enzyme Gap lm expression vector (pEF-Bos-Gap lm). After transfection by the calcium phosphate method, the cells were solubilized after culturing at 48 hours, and the supernatant was obtained after centrifugation. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer. Sos in the right box of the graph shown in Fig. 7 indicates the fluorescence profile of Rafras 1722 when both pRafras 1722 and pCAGGS-mSos were transfected, and Gap lm indicates that pRafras 1722 and pEF- This shows the fluorescence profile of Rafras 1722 when Bos-Gap 1 m was transfected together.
第 8図は、 発現タンパク質 R a f r a s 1 722の GT P結合タンパク質上の GTPと GDPの比 〔GTP/ (GDP + GTP) (%) 〕 に対する励起波長 4 33 nmでの波長 475 nmと波長 530 nmの蛍光強度比 (波長 530/47 5) を示す。 HEK 293 T細胞に pRa f r a s 1 722と様々な量のグァニ ンヌクレオチド交換因子 So s発現ベクター (pCAGGS— mSo s) あるい は GTP水解促進酵素 Gap lm発現べクタ一 (pEF— Bo s— Gap lm) をトランスフエクトした。 48時間培養後に32 P i標識し、 Ra f r a s 1 72 2を抗 GFP抗体で免疫沈降した後に、 Ra f r a s 1722に結合している G TPおよび GDPを薄層クロマトグラフィーで分離、 定量した。 一方、 同様に処 理した細胞可溶化液について蛍光プロフィールを測定し、 励起波長 433 nmで の波長 475 nmと波長 530 nmの蛍光強度比を測定した。 Ra f r a s 1 7 22上の GTPの量に依存して蛍光強度比が増強されることが分かる。 Figure 8 shows the ratio of GTP to GDP on the GTP-binding protein of the expressed protein Rafras 1722 [GTP / (GDP + GTP) (%)] versus the excitation wavelength of 433 nm at 433 nm and 530 nm. Shows the fluorescence intensity ratio (wavelength 530/475). In HEK 293 T cells, pRafras 1722 and various amounts of guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos) or GTP hydrolysis enzyme Gap lm expression vector (pEF-Bos-Gap lm) ) Was transfected. 32 P i and labeled after 48 hours of culture, the Ra fras 1 72 2 after immunoprecipitation with anti-GFP antibody, separating the G TP and GDP bound to Ra fras 1722 by thin layer chromatography and quantified. On the other hand, the fluorescence profile of the cell lysate treated in the same manner was measured, and the fluorescence intensity ratio between the wavelength of 475 nm at the excitation wavelength of 433 nm and the wavelength of 530 nm was measured. It can be seen that the fluorescence intensity ratio is enhanced depending on the amount of GTP on Rafras1722.
第 9図は、 発現タンパク質 R a f r a s 1 722を発現する細胞株が得られた ことを示す。 N 1 ^13丁3細胞に 1^& f r a s 1 72 2をトランスフエクトし 、 細胞株 3 T 3— R a f r a sを樹立した。 細胞を可溶化し、 抗 GFP抗体を用 いてィムノブロッティングにて R a f r a s 1 72 2の発現について解析した。 第 9図に示すィムノブロッテイングの左には分子量マ一力一を示す。 Figure 9 shows that a cell line expressing the expressed protein Rafras 1722 was obtained. Indicates that 1 ^ & fras 172 2 was transfected into N 1 ^ 13 cho3 cells to establish the cell line 3T3-Rafras. The cells were solubilized and analyzed for Rafras722 expression by immunoblotting using an anti-GFP antibody. The molecular weight is shown on the left side of the imnotlotting shown in FIG.
第 1 0図は、 3T 3— Ra f r a s細胞を用いた R a s活性化の解析を示す。 FIG. 10 shows an analysis of Ras activation using 3T3-Rafras cells.
3 T 3 -Ra f r a s細胞を EGF ( 1 ja g/m \ ) で刺激し、 その前後で 4 33 T 3 -Ra fr a s cells were stimulated with EGF (1 ja g / m \),
3 nmの波長で励起した蛍光プロフィール (波長 4 5 0 ηπ!〜 5 5 0 nm) を測 定した。 The fluorescence profile (wavelength 450 ηπ! ~ 550 nm) excited at a wavelength of 3 nm was measured.
第 1 1図は、 プラスミ ド pR a i— c hu 3 1 1の構造を示す。 バックボーン となるベクターの構造は第 3図と同一である。 FIG. 11 shows the structure of plasmid pR ai — c hu 311. The structure of the backbone vector is the same as in Fig. 3.
第 1 2図は、 プラスミ ド pRa i— c hu 3 1 1の翻訳領域における塩基配列 および予測されるァミノ酸配列を示す。 FIG. 12 shows the nucleotide sequence and predicted amino acid sequence in the translation region of plasmid pRa i — chu311.
第 1 3図は、 プラスミ ド pR a i— c hu 3 1 1の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 13 shows the nucleotide sequence and predicted amino acid sequence (continued) in the translation region of plasmid pR ai—c hu31 1.
第 1 4図は、 プラスミ ド pRa i— c hu 3 1 1の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 14 shows the nucleotide sequence and the predicted amino acid sequence (continued) in the translation region of plasmid pRa i—chu311.
第 1 5図は、 発現夕ンパク質 R a i - c hu 3 1 1の蛍光プロフィールを示す 。 HEK 2 9 3 T細胞に pRa i - c hu 3 1 1とグァニンヌクレオチド交換因 子 C 3 G発現べクタ一 (pCAGGS— C 3 G;文献 9に記載) あるいは GTP 水解促進酵素 r a p 1 GAP I I発現べクタ一 (p CAGGS— r a p l GAP I I ;文献 9に記載) とをリン酸カルシウム法にてトランスフヱクトし、 4 8時 間培養後に細胞を可溶化し、 遠心分離後、 上清を得た。 該上清について励起波長 FIG. 15 shows the fluorescence profile of the expressed protein R ai -c hu 311. HEK293 T cells have pRa i-chu31 1 and guanine nucleotide exchange factor C3G expression vector (pCAGGS-C3G; described in Reference 9) or GTP water-degrading enzyme rap 1 GAP II The expression vector (p CAGGS-rapl GAP II; described in Reference 9) was transfected with the calcium phosphate method, and after culturing for 48 hours, the cells were solubilized and centrifuged to obtain a supernatant. Excitation wavelength for the supernatant
4 3 3 nmにて、 波長 4 5 0 nm〜 5 5 0 nmにおける蛍光強度を蛍光分光光度 計にて測定した。 第 1 5図に示すグラフの右囲みにおける C 3 Gは pR a i— c hu 3 1 1と pCAGGS— C 3 Gを共にトランスフエクトした場合における R a i - c hu 3 1 1の蛍光プロフィールであることを、 r a p 1 GAP I Iは p Ra i -chu 31 1と pCAGGS— r ap l GAP I Iを共にトランスフエ クトした場合における R a i - c hu 31 1の蛍光プロフィールであることを示 す。 At 433 nm, the fluorescence intensity at a wavelength of 450-550 nm was measured with a fluorescence spectrophotometer. C 3 G in the right box of the graph shown in FIG. 15 is the fluorescence profile of R ai-c hu 31 1 when both pR ai — c hu 31 1 and pCAGGS — C 3 G were transfected Rap 1 GAP II is p This shows the fluorescence profile of Rai-chu311 when both Rai-chu311 and pCAGGS-raplGAPII were transfected.
第 16図は、 プラスミ ド pRa i— chu 158の構造を示す。 バックボーン となるベクターの構造は第 3図と同一である。 FIG. 16 shows the structure of plasmid pRa i-chu 158. The structure of the backbone vector is the same as in Fig. 3.
第 17図は、 プラスミ ド pRa i— chu 158の翻訳領域における塩基配列 および予測されるァミノ酸配列を示す。 FIG. 17 shows the nucleotide sequence and predicted amino acid sequence in the translation region of plasmid pRa i-chu 158.
第 18図は、 プラスミ ド pRa i— c hu 158の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 18 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu158.
第 19図は、 プラスミ ド pRa i— c hu 158の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 19 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu158.
第 20図は、 発現タンパク質 R a i - c hu 158の蛍光プロフィールを示す 。 HEK 293 T細胞に pRa i -chu 158とグァニンヌクレオチド交換因 子 Ca l DAG— GEF I I I発現ベクター (pCAGGS— Ca lDAG— G EF I I I ;文献 10に記載) あるいは GTP水解促進酵素 Gap lm発現べク ター (pEF— Bo s— Gap lm)をリン酸カルシウム法にてトランスフエク トし、 48時間培養後に細胞を可溶化し、 遠心分離後、 上清を得た。 該上清につ いて励起波長 433 nmにて、 波長 450 nm〜 550 nmにおける蛍光強度を 蛍光分光光度計にて測定した。 第 20図に示すグラフの右囲みにおける Gap 1 mは pRa i—chu l 58と pEF— Bos— Gap l mを共にトランスフエ クトした場合における Ra i— chu 158の蛍光プロフィールであることを、 Ca 1 DAG-GEF I I Iは pRa i— chu l 58と pCAGGS— Ca l DAG-GEF I I Iを共にトランスフエクトした場合における R a i - c hu 158の蛍光プロフィールであることを示す。 FIG. 20 shows the fluorescence profile of the expressed protein Rai-chu158. HEK 293 T cells contain pRa i-chu 158 and a guanine nucleotide exchange factor Cal DAG-GEF III expression vector (pCAGGS-CalDAG-GEF III; described in Reference 10) or GTP lmmolysis promoting enzyme Gap lm expression vector (PEF-Bos-Gap lm) was transfected by the calcium phosphate method. After culturing for 48 hours, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer. Gap 1 m in the right box of the graph shown in FIG. 20 indicates the fluorescence profile of Ra i-chu 158 when both pRa i-chul 58 and pEF-Bos-Gap lm were transfected. DAG-GEF III shows the fluorescence profile of Rai-chu 158 when both pRa i-chul 58 and pCAGGS-Cal DAG-GEF III were transfected.
第 21図は、 プラ ミ ド pRa i— c hu 1 19の翻訳領域における塩基配列 および予測されるァミノ酸配列を示す。 第 22図は、 プラスミ ド pRa i— c hu 1 1 9の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 21 shows the nucleotide sequence and predicted amino acid sequence in the translation region of the plasmid pRa i—chu119. FIG. 22 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i—chu119.
第 23図は、 プラスミ ド pRa i— chu 1 1 9の翻訳領域における塩基配列 および予測されるアミノ酸配列 (つづき) を示す。 FIG. 23 shows the nucleotide sequence and predicted amino acid sequence (continued) of the translation region of plasmid pRa i-chu119.
第 24図は、 発現タンパク質 R a i— chu 1 1 9の蛍光プロフィールを示す 。 HEK 293丁細胞に 1¾& i - c hu 1 1 9または pRa f r a s 1 722 とグァニンヌクレオチド交換因子 S o s発現べクタ一 (pCAGGS—mSo s ) とをリン酸カルシウム法にてトランスフエクトし、 24時間培養後に 33でお よび 40°Cに移し、 さらに 24時間培養を加えた後、 細胞を可溶化し、 遠心分離 して上清を得た。 該上清について励起波長 433 nmにて、 波長 450 nm〜5 50 nmにおける蛍光強度を蛍光分光光度計にて測定した。 第 21図に示すグラ フの右囲みにおける対照は pR a f r a s 1 722と pCAGGS— mSo sを 共にトランスフエクトした場合における R a i - c hu 1 1 9の蛍光プロフィ一 ルであることを、 変異ありは pR a i - c hu 1 1 9と pCAGGS—mSo s を共にトランスフヱクトした場合における R a i— chu 1 1 9の蛍光プロフィ —ルであることを示す。 Ra i— chu 1 1 9では野生型 (R a f r a s 1 72 2) より、 グァニンヌクレオチド交換因子に対する反応性が増加していた。 第 25図は、 上皮細胞増殖因子 (EGF)添加による細胞内における ECFP および EYF Pの蛍光強度の経時的変化の結果を示す。 実施例 1に記載の蛍光顕 微鏡システムを用いて、 波長 430 nmの励起光を照射して蛍光波長 475 nm および 530 nmでの画像を経時的に取得し、 当該画像から E C F Pおよび E Y FPの蛍光強度を求めた。 FIG. 24 shows the fluorescence profile of the expressed protein Rai-chu119. HEK 293 cells were transfected with 1¾ & i-cu hu 119 or pRafras 1722 and guanine nucleotide exchange factor S os expression vector (pCAGGS-mSo s) by the calcium phosphate method, and cultured for 24 hours. After transferring at 33 and 40 ° C and culturing for an additional 24 hours, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer. The control in the right box of the graph shown in Fig. 21 is the fluorescence profile of Rai-chu119 when both pRafras 1722 and pCAGGS-mSos were transfected. This shows that this is the fluorescence profile of Rai-chu119 when pRai-chu119 and pCAGGS-mSos are transfected together. Ra i-chu 1 19 had increased reactivity to the guanine nucleotide exchange factor compared to the wild type (Rafras 17 22). FIG. 25 shows the results of the change over time in the fluorescence intensity of ECFP and EYFP in cells by the addition of epidermal growth factor (EGF). Using the fluorescence microscope system described in Example 1, excitation light having a wavelength of 430 nm was irradiated to obtain images at fluorescence wavelengths of 475 nm and 530 nm over time, and ECFP and EY FP were obtained from the images. The fluorescence intensity was determined.
第 26図は、 種々のグァニンヌクレオチド交換因子および GTP水解促進酵素に よる発現タンパク質 Rafrasl722における ECFPと EYFPの蛍光強度比の変化を示すグ ラフである。 HEK293T細胞に pRafrasl722とグァニンヌクレオチド交換因子発現 ベクターあるいは GTP水解促進酵素発現ベクターとをリン酸カルシウム法にてト ランスフ クトし、 2 4時間以上培養後に細胞を可溶化し、 遠心分離して上清を 得た。 該上清について励起波長 4 3 3 n mにて、 波長 4 7 5 n mおよび 5 3 0 η mにおける蛍光強度を蛍光分光光度計にて測定した。 後者の前者に対する比 (蛍 光強度比) をグラフに示してある。 FIG. 26 is a graph showing changes in the fluorescence intensity ratio between ECFP and EYFP in the expressed protein Rafrasl722 by various guanine nucleotide exchange factors and GTP hydrolysis promoter. HEK293T cells were transfected with pRafrasl722 and a guanine nucleotide exchange factor expression vector or a GTP hydrolysis promoter expression vector by the calcium phosphate method. After transfection and culturing for 24 hours or more, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant was measured at an excitation wavelength of 433 nm, a wavelength of 475 nm, and a fluorescence intensity of 530 nm using a fluorescence spectrophotometer. The ratio of the latter to the former (fluorescence intensity ratio) is shown in the graph.
第 2 7図は、 種々のグァニンヌクレオチド交換因子および GTP水解促進酵素に よる発現タンパク質 Rai-chu404における ECFPと EYFPの蛍光強度比の変化を示すグ ラフである。 HEK293T細胞に p Rai-chu404とグァニンヌクレオチド交換因子発現 ベクタ一あるいは GTP水解促進酵素発現べクタ一とをリン酸カルシウム法にてト ランスフエクトし、 2 4時間以上培養後に細胞を可溶化し、 遠心分離して上清を 得た。 該上清について励起波長 4 3 3 n mにて、 波長 4 7 5 n mおよび 5 3 0 n mにおける蛍光強度を蛍光分光光度計にて測定した。 後者の前者に対する比 (蛍 光強度比) をグラフに示してある。 FIG. 27 is a graph showing changes in the fluorescence intensity ratio between ECFP and EYFP in the expressed protein Rai-chu404 by various guanine nucleotide exchange factors and GTP hydrolysis enzymes. HEK293T cells were transfected with pRai-chu404 and a guanine nucleotide exchange factor expression vector or GTP hydrolysis promoter vector by the calcium phosphate method.After culturing for 24 hours or more, the cells were solubilized and centrifuged. To obtain a supernatant. The fluorescence intensity of the supernatant was measured at an excitation wavelength of 433 nm and at wavelengths of 475 nm and 530 nm using a fluorescence spectrophotometer. The ratio of the latter to the former (fluorescence intensity ratio) is shown in the graph.
第 2 8図は、 EGF添加による pRai-chulOIXまたは pRai-chu404Xをトランスフエ クトした C0S1細胞内における EYFPの ECFPに対する蛍光強度比の経時的変化ならび に、 細胞内分布を示す写真である。 C0S1細胞に pRai-chulOIXあるいは pRai-chu40 4Xをトランスフエクトし、 2 4時間以上培養後に、 培地をフヱノールレッドおよ び血清を含まない培地に交換した。 ついで、 キセノン光源を有する倒立型蛍光顕 微鏡 (Carl Zeiss, Axiovert 100) に回転式蛍光励起フィルタ一および回転式蛍 光発光フィルター装置 (LUDL electronic社) を備え、 高感度冷却 CCD カメラ(P hotometrix社、 Micromax450)を備え、 日本口—パ—社製 Metamorph画像解析ソフ トにて制御ならびに解析できるシステムを用いて画像を取得した。 細胞に 430 nm の励起光を照射し、 475 nmの ECFPドナ一の蛍光波長での画像を CCD カメラにより 撮影し、 ついで、 530腿の EYFPァクセプターの蛍光波長での画像を撮影した。 こ れを 3 0秒間隔で行った。 データ取得後、 デジタル画像上の各ピクセルについて 、 EYFP/ECFPの蛍光強度比を 8段階に分け、 青から赤までの色を割り当てた。一 方、 ECFPの蛍光強度を明度として割り当てることによりビデオ画像が作成できる 。 本図ではこのうちの図に示す時間の画像を示してある。 Rai- chulOIX発現細胞 に EGFを添加すると、 FRET効率を反映する蛍光強度比が細胞の辺縁部から徐々に 中央部に向かって上昇していく過程が見える。 一方、 Rai-chu 4 0 4 Xを発現す る細胞においては、 中央部から辺縁部に向かって活性が上昇するのがわかる。 こ のように、 本発明の活性モニタータンパク質は、 Ras フアミリー G タンパク質の 活性化に関する時間情報と、 細胞内の空間情報の双方を同時に得ることを可能と する。 FIG. 28 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in C0S1 cells transfected with pRai-chulOIX or pRai-chu404X due to the addition of EGF. The C0S1 cells were transfected with pRai-chulOIX or pRai-chu404X. After culturing for 24 hours or more, the medium was replaced with a medium free of phenol red and serum. Next, an inverted fluorescence microscope with a xenon light source (Carl Zeiss, Axiovert 100) is equipped with a rotating fluorescence excitation filter and a rotating fluorescence emission filter device (LUDL electronic), and a high-sensitivity cooled CCD camera (P hotometrix). The image was acquired using a system that can be controlled and analyzed by Metamorph image analysis software manufactured by Nippon Koupa Co., Ltd. The cells were irradiated with excitation light at 430 nm, and an image at the fluorescence wavelength of the ECFP donor at 475 nm was taken with a CCD camera, followed by an image at the fluorescence wavelength of the 530 thigh EYFP receptor. This was performed at 30 second intervals. After data acquisition, the EYFP / ECFP fluorescence intensity ratio was divided into eight levels for each pixel on the digital image, and colors from blue to red were assigned. On the other hand, video images can be created by assigning ECFP fluorescence intensity as brightness. . In this figure, the images at the times shown in these figures are shown. When EGF is added to Rai-chulOIX-expressing cells, a process is observed in which the fluorescence intensity ratio, which reflects the FRET efficiency, gradually increases from the cell edge toward the center. On the other hand, in the cells expressing Rai-chu404X, the activity increases from the center toward the periphery. As described above, the activity monitor protein of the present invention makes it possible to simultaneously obtain both temporal information on the activation of Ras family G protein and spatial information in a cell.
第 2 9図は、 EGF添加による pRai- chulOIXをトランスフヱクトしたサブコンフ ルェントな状態の C0S1細胞内における EYFPの ECFPに対する蛍光強度比の経時的変 化ならびに、 細胞内分布を示す写真である。 サブコンフルェントな状態の C0S1細 胞を用いた以外は第 2 8図の説明に記載したのと同様の方法により実験を行った 。 Rai- chulOIX発現細胞に EGF を添加すると、 FRET効率を反映する蛍光強度比が 他の細胞には接着していない辺縁部から上昇していく過程が見える。 一方、 隣の 細胞と接着している部位ではこの FRET効率の上昇が抑制されているのがわかる。 第 3 0図は、 神経成長因子添加による pRai-chulOIXまたは pRai- chu404Xをトラ ンスフヱクトした PC 1 2細胞内における EYFPの ECFPに対する蛍光強度比の経時的 変化ならびに、 細胞内分布を示す写真である。 PC 1 2細胞に pRai- chulOIXあるい は pRai-chu404Xをトランスフヱクトし、 2 4時間以上培養後に、 培地をフヱノー ルレッドおよび血清を含まない培地に交換し、 さらに神経成長因子を加え、 第 2 8図の説明に記載したのと同様の方法により観察した。 本図ではこの連続する画 像のうち、 図に示す時間の画像のみを示してある。 Rai-chulOIX発現細胞に神経 成長因子を添加すると、 FRET効率を反映する蛍光強度比が細胞の辺縁部から徐々 に中央部に向かって上昇していく過程が見える。 そして、 神経様突起の進展が明 らかな 1 8 0分以後においては、 FRET効率の上昇はこの神経様突起に主に限局し ていることがわかる。 一方、 Rai-chu 4 0 4 Xを発現する細胞においては、 逆に 中央部から辺縁部に向かつて活性が上昇し、 分化した神経様突起ではこの FRET効 率が抑制されているのがわかる。 このことは、 分化誘導の過程において Ras が細 胞辺縁部より、 Raplが細胞の中心部より活性化され、 分化が完成した後は、 Ras は神経様突起において高い活性が持続していることを示している。 このことは、 Ras フアミリ一 G タンパク質が細胞内の異なる部位では異なる活性化状態にある ことを明らかにするもので、 本発明の活性モニタータンパク質群が Ras ファミリ — G タンパク質活性化に関する時間的、 空間的情報を得るのに至適な分子プロ一 ブであることを示すものである。 FIG. 29 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in subconfluent C0S1 cells transfected with pRai-chulOIX by addition of EGF. The experiment was performed by the same method as described in the explanation of FIG. 28, except that C0S1 cells in a subconfluent state were used. When EGF was added to Rai-chulOIX-expressing cells, the process of increasing the fluorescence intensity ratio, which reflects the FRET efficiency, from the margin that did not adhere to other cells was observed. On the other hand, it can be seen that this increase in FRET efficiency is suppressed at the site where it adheres to the adjacent cells. FIG. 30 is a photograph showing a time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and intracellular distribution in PC12 cells transfected with pRai-chulOIX or pRai-chu404X due to the addition of nerve growth factor. Transfect pRai-chulOIX or pRai-chu404X into PC12 cells, and after culturing for 24 hours or more, replace the medium with a medium free of phenol red and serum, and add nerve growth factor. The observation was performed in the same manner as described in the description of FIG. In this figure, only the image at the time shown in the figure among the continuous images is shown. When nerve growth factor was added to Rai-chulOIX-expressing cells, a process was observed in which the fluorescence intensity ratio, which reflects the FRET efficiency, gradually increased from the periphery of the cells toward the center. After 180 minutes, when the development of neurites is apparent, the increase in FRET efficiency is mainly limited to these neurites. On the other hand, in cells expressing Rai-chu404X, the activity increases from the central part to the peripheral part, and the FRET effect is increased in differentiated neurites. It can be seen that the rate is suppressed. This indicates that Ras is activated from the cell periphery and Rapl is activated from the center of the cell during the induction of differentiation, and that Ras maintains high activity in neurites after differentiation is completed. Is shown. This demonstrates that Ras family G proteins are in different activation states at different sites in the cell, and the activity monitor proteins of the present invention have a temporal and spatial relationship with the Ras family — G protein activation. This indicates that it is the optimal molecular probe for obtaining relevant information.
第 3 1図は、 プラスミ ド pRai-chulOllXの構造を示す。 バックボーンとなるベ クタ一の構造は第 3図と同一である。 FIG. 31 shows the structure of plasmid pRai-chulOllX. The structure of the backbone vector is the same as in Fig. 3.
第 3 2図は、 プラスミ ド pRai- chul054Xの構造を示す。 バックボーンとなるベ クターの構造は第 3図と同一である。 FIG. 32 shows the structure of plasmid pRai-chul054X. The structure of the backbone vector is the same as in Fig. 3.
第 3 3図は、 プラスミ ド pRai-chul214Xの構造を示す。 バックボーンとなるベ クタ一の構造は第 3図と同一である。 FIG. 33 shows the structure of plasmid pRai-chul214X. The structure of the backbone vector is the same as in Fig. 3.
第 3 4図は、 発現タンパク質 Rai-chulOllx (野生型) 、 Rai-chul012X (活性化 型) 、 Rai-chul013X (非活性化型) の蛍光プ αフィールを示す。 ΗΕΚ293Τ細胞に pRai-chulOllx、 pRai-chul012X、 または pRai- chul013Xをリン酸カルシウム法 にてトランスフヱクトし、 48時間後に細胞を ^"溶化し、 遠心分離して上清を得た 。 該上清について励起波長 433nm にて、 波長 450nm〜550nm における蛍光強度を 蛍光分光光度計にて測定した。 FIG. 34 shows the fluorescence profiles of the expressed proteins Rai-chulOllx (wild-type), Rai-chul012X (activated), and Rai-chul013X (non-activated). The <293> cells were transfected with pRai-chulOllx, pRai-chul012X, or pRai-chul013X by the calcium phosphate method, and after 48 hours, the cells were lysed and centrifuged to obtain a supernatant. At a wavelength of 433 nm, the fluorescence intensity at a wavelength of 450 nm to 550 nm was measured with a fluorescence spectrophotometer.
第 3 5図は、 発現タンパク質 Rai-chul054x (野生型) 、 Rai-chul052X (活性化 型) の蛍光プロフィールを示す。 HEK293T細胞に pRai-chul054x または pRai- chu 1052X をリン酸カルシウム法にてトランスフヱクトし、 48時間後に細胞を可溶化 し、 遠心分離して上清を得た。 該上清について励起波長 433nm にて、 波長 450mn 〜550nm における蛍光強度を蛍光分光光度計にて測定した。 FIG. 35 shows the fluorescence profiles of the expressed proteins Rai-chul054x (wild type) and Rai-chul052X (activated type). HEK293T cells were transfected with pRai-chul054x or pRai-chu 1052X by the calcium phosphate method. 48 hours later, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 450 mn to 550 nm was measured with a fluorescence spectrophotometer.
第 3 6図は、 発現タンパク質 Rai-chul214X (野生型) および Rai- chul220X (活 性化型) の蛍光プロフィールを示す。 HEK293T細胞に pRai-chul214X または pRai -chul220X をリン酸カルシウム法にてトランスフヱクトし、 48時間後に細胞を可 溶化し、 遠心分離して上清を得た。 該上清について励起波長 433nmにて、 波長 45 Onm〜550nra における蛍光強度を蛍光分光光度計にて測定した。 FIG. 36 shows the fluorescence profiles of the expressed proteins Rai-chul214X (wild type) and Rai-chul220X (activated). PRai-chul214X or pRai in HEK293T cells -chul220X was transfected by the calcium phosphate method, and after 48 hours, the cells were solubilized and centrifuged to obtain a supernatant. The fluorescence intensity of the supernatant at an excitation wavelength of 433 nm and a wavelength of 45 Onm to 550 nra was measured with a fluorescence spectrophotometer.
第 3 7図は、 EGF添加による pRai- chulOllXをトランスフエクトした C0S1細胞 内における EYFPの ECFPに対する蛍光強度比の経時的変化ならびに、 細胞内分布を 示す写真である。 第 2 8図の説明に記載したのと同様の方法により実験を行った 。 Rai- chulOllX発現細胞に EGF を添加すると、 まず、 1分間以内に一過性に細胞 全体に FRET効率を反映する蛍光強度比が上昇し、 ついで、 細胞膜のラッフリング が起こっている部位で蛍光強度比の上昇と中心部での蛍光強度比の低下が観察さ れる。 これは、 Rai-chulOIXを用いて調べた Ras の活性化や Rai-chu404Xを用い て調べた Raplの活性化とは異なる時間経過、 空間的分布を示す結果であり、 本発 明の活性モニタ一タンパク質群が R h oファミリー G T P結合タンパク質の活性 化に関しても時間的、 空間的情報を得るのに至適な分子プローブであることを示 すものである。 発明を実施するための最良の形態 FIG. 37 is a photograph showing the time-dependent change in the fluorescence intensity ratio of EYFP to ECFP and the intracellular distribution in C0S1 cells transfected with pRai-chulOllX by addition of EGF. An experiment was performed in the same manner as described in the description of FIG. When EGF is added to Rai-chulOllX-expressing cells, the fluorescence intensity ratio that reflects the FRET efficiency transiently increases throughout the cell within one minute, and then the fluorescence intensity ratio at the site where cell membrane ruffling occurs. And a decrease in the fluorescence intensity ratio at the center. This is a result that shows a different time course and spatial distribution from the activation of Ras examined using Rai-chulOIX and the activation of Rapl examined using Rai-chu404X. This indicates that the proteins are optimal molecular probes for obtaining temporal and spatial information on the activation of Rho family GTP-binding proteins. BEST MODE FOR CARRYING OUT THE INVENTION
本発明の低分子量 G T P結合タンパク質の活性モニタータンパク質 (以下、 モ 二夕一タンパク質という) は、 G T P結合型の低分子量 GT P結合タンパク質が 特異的にその標的タンパク質のみに結合するという性質を利用したものであり、 非侵襲的な低分子量 G T P結合タンパク質の活性化の測定に非常に有用なタンパ ク質である。 本発明のモニタ一タンパク質は、 低分子量 G T P結合タンパク質、 該低分子量 G T P結合タンパク質の標的タンパク質、 G F Pァクセプタ一タンパ ク質、 および G F Pドナ一タンパク質からなる融合タンパク質であり、 各タンパ ク質が適切に、 すなわち個々に本来のコンフオメーシヨンを形成して各タンパク 質が有する機能を完全な程度に発揮し得るような状態で、 前記各タンパク質が直 接または間接的に連結されてなる。 従って、 かかる融合タンパク質のアミノ酸配 列は、 前記各夕ンパク質のァミノ酸配列部分が直接または間接的に連結されてな る構造を有する。 なお、 本発明のモニタータンパク質を構成する各タンパク質は 、 当該夕ンパク質が有する機能を完全な程度に発揮し得るようであれば当該夕ン パク質の一部であつてもよい。 The activity monitoring protein of the low molecular weight GTP-binding protein of the present invention (hereinafter referred to as "monitor protein") utilizes the property that the GTP-binding low-molecular-weight GTP-binding protein specifically binds only to its target protein. It is a very useful protein for measuring non-invasive activation of small GTP-binding proteins. The monitor protein of the present invention is a fusion protein comprising a low molecular weight GTP-binding protein, a target protein of the low molecular weight GTP-binding protein, a GFP receptor protein, and a GFP donor protein. That is, the respective proteins are directly or indirectly linked in such a state that the original conformations are individually formed and the functions of the respective proteins can be fully exhibited. Therefore, the amino acid sequence of such a fusion protein The rows have a structure in which the amino acid sequence portions of the proteins are directly or indirectly linked. Each protein constituting the monitor protein of the present invention may be a part of the protein, as long as the function of the protein can be fully exhibited.
本明細書においては、 モニタ一タンパク質内に含まれる各タンパク質をいう場 合、 例えば、 標的タンパク質を例にあげると、 標的タンパク質そのものと区別し 、 標的タンパク質部分というべきところ、 かかる区別なく、 簡易に標的タンパク 質と表現する。 In the present specification, when referring to each protein contained in a monitor protein, for example, in the case of a target protein, for example, the target protein is distinguished from the target protein itself, and the target protein portion is simply referred to. Expressed as the target protein.
本発明のモニタータンパク質では、 低分子量 GTP結合タンパク質の GTPと の結合による活性化 (GDP結合型の、 グァニンヌクレオチド交換因子による G T P結合型への変換による低分子量 G T P結合タンパク質の活性化を含む) に伴 いモニタータンパク質内で低分子量 GTP結合タンパク質とその標的タンパク質 とが結合し、 その結果、 GFPドナ一タンパク質から GFPァクセプタータンパ ク質への FRET効率に変化が生ずることになる。 第 2図に、 本発明のモニタ一 タンパク質の一例を模式的に示し、 該モニタータンパク質を用いる、 FRETを 利用した低分子量 GTP結合タンパク質の活性化を測定する方法の原理を示す。 なお、 本明細書において FRET効率とは、 GFPドナ一タンパク質に対する励 起光を本発明のモニタ一タンパク質に照射した場合の、 GFPドナ一タンパク質 の蛍光波長における蛍光強度と G F Pァクセプタータンパク質の蛍光波長におけ る蛍光強度との比 (蛍光強度比) をいう。 詳しくは後述する。 In the monitor protein of the present invention, activation of a low-molecular-weight GTP-binding protein by binding to GTP (including activation of a low-molecular-weight GTP-binding protein by conversion of a GDP-binding protein to a GTP-binding protein by a guanine nucleotide exchange factor) As a result, the low-molecular-weight GTP-binding protein and its target protein bind in the monitor protein, resulting in a change in the FRET efficiency from the GFP donor protein to the GFP receptor protein. FIG. 2 schematically shows an example of the monitor protein of the present invention, and shows the principle of a method for measuring the activation of a low molecular weight GTP-binding protein using FRET using the monitor protein. In the present specification, the FRET efficiency refers to the fluorescence intensity at the fluorescence wavelength of the GFP donor protein and the fluorescence of the GFP receptor protein when the monitor protein of the present invention is irradiated with excitation light for the GFP donor protein. The ratio with the fluorescence intensity at the wavelength (fluorescence intensity ratio). Details will be described later.
FRETを実現するためには、 i) GFPドナーの発光スペクトラムと GFP ァクセプ夕一の吸光スペクトラムとの重なり、 ii) ドナ一とァクセプ夕一間の距 離、 iii) ドナーの発光モーメントとァクセプ夕一の吸光モーメントの配向の 3 因子を考慮しなければならない。 また、 GFPを他のタンパク質と融合する場合 、 他のタンパク質と融合することがストレスとなって GFPのミスフォールディ ングが生じ、 その結果、 発色団形成の効率が低下し、 無蛍光の GFPとなる可能 性をも考慮しなければならない。 このように、 GFPドナーと GFPァクセプ夕 —を利用して両者間に FRETの良好な発現を生じさせるには厳格な条件が存在 し、 未だ両者間の配置等に一定の規則も見出されておらず、 FRETの実現は一 般に困難である。 すなわち、 FRETの実現は公知の技術常識に基づき容易にな し得るものではなく、 期待し得る程度を超える試行錯誤や複雑高度の実験等を要 するものである。 本発明のモニタータンパク質は、 前記タンパク質を、 本発明の 所望の効果が得られ得るように適切に組み合わせたものであり、 G T P結合型の 低分子量 GT P結合タンパク質が特異的にその標的タンパク質のみに結合すると レ、う性質を利用し、 G T Pの低分子量 G T P結合タンパク質への結合に応じて変 化し得る GFPドナータンパク質と GFPァクセプタータンパク質との間で生ず る F R E Tを実現させたもので、 その技術的価値は非常に大きい。 To achieve FRET, i) the emission spectrum of the GFP donor overlaps the absorption spectrum of the GFP receptor, ii) the distance between the donor and the receptor, iii) the donor's luminescence moment and the receptor The three factors of the orientation of the extinction moment must be taken into account. Also, when GFP is fused with another protein, the fusion of the GFP with another protein causes stress, resulting in GFP misfolding. As a result, the efficiency of chromophore formation is reduced, and non-fluorescent GFP is used. Possible Sex must also be considered. As described above, there are strict conditions for using the GFP donor and the GFP receptor to produce good expression of FRET between the two, and certain rules have been found for the arrangement between the two. Nonetheless, realizing FRET is generally difficult. That is, realization of FRET is not something that can be easily achieved based on the common general technical knowledge, but requires trial and error that is more than expected and complicated experiments. The monitor protein of the present invention is obtained by appropriately combining the above proteins so that the desired effect of the present invention can be obtained, and the GTP-bound low-molecular-weight GTP-binding protein specifically binds only to its target protein. By utilizing the properties of GTP when bound, FRET is realized between the GFP donor protein and the GFP receptor protein, which can be changed according to the binding of GTP to low molecular weight GTP-binding protein. Its technical value is very large.
本発明のモニタ一タンパク質における各構成タンパク質の結合の順序は、 低分 子量 GTP結合タンパク質の活性化前後における FRET効率の差 (以下、 単に FRET効率の差という) の増大を考慮して適宜選択され得る。 低分子量 GTP 結合タンパク質の活性化前後における FRET効率の差が大きい程、 当該タンパ ク質の活性化状態をより的確に捉えることができ、 従って、 低分子量 GTP結合 タンパク質の活性化の測定精度を向上させることができるので好ましい。 該モニ タータンパク質における低分子量 GTP結合タンパク質と該低分子量 GTP結合 夕ンパク質の標的夕ンパク質との結合の好ましい態様としては、 ァミノ末端側に 存在する低分子量 GTP結合タンパク質の標的タンパク質結合部位のカルボキシ ル末端が、 カルボキシル末端側に存在する標的タンパク質のァミノ末端に直接ま たは間接的に結合される態様 (1)、 ァミノ末端側に存在する標的タンパク質の カルボキシル末端が、 カルボキシル末端側に存在する低分子量 GTP結合夕ンパ ク質の標的タンパク質結合部位のァミノ末端に直接または間接的に結合される態 様 (2)が挙げられる。 特に、 低分子量 GTP結合タンパク質が R a sフアミ リ 一に属するものである場合は態様 (1)が、 Rhoフアミリーに属するものであ る場合は態様 (2) が好ましい。 GFPァクセプタータンパク質および GFPド ナータンパク質は各々、 それらのァミノ末端またはカルボキシル末端が低分子量 GTP結合タンパク質と標的タンパク質とが連結されたもの (連結物) のァミノ 末端またはカルボキシル末端に直接または間接的に連結されて連結される。 中で も、 前記連結物のァミノ末端に G F Pァクセプタ一タンパク質のカルボキシル末 端が、 カルボキシル末端に GFPドナータンパク質のァミノ末端が直接または間 接的に連結されてなるモニタータンパク質が好ましい。 従って、 本発明のモニタ —タンパク質としては、 該モニタ一タンパク質において、 ァミノ末端側より、 G FPァクセプタータンパク質、 低分子量 GTP結合タンパク質、 該低分子量 GT P結合タンパク質の標的タンパク質、 GFPドナ一タンパク質となるように、 あ るいはァミノ末端側より、 GFPァクセプタータンパク質、 低分子量 GTP結合 タンパク質の標的タンパク質、 該低分子量 GTP結合タンパク質、 GFPドナ一 タンパク質となるように、 それぞれ直接または間接的に連結されてなるものが特 に好ましい。 なお、 「間接的に連結」 とは、 各タンパク質間の連結を、 たとえば 、 後述するスぺ一サーとしてのペプチド等を介して行う態様をいう。 The order of binding of the constituent proteins in the monitor protein of the present invention is appropriately selected in consideration of the increase in the difference in FRET efficiency before and after activation of the low molecular weight GTP-binding protein (hereinafter simply referred to as the difference in FRET efficiency). Can be done. The greater the difference in FRET efficiency before and after activation of the low molecular weight GTP-binding protein, the more accurately the activation state of the protein can be grasped, thus improving the measurement accuracy of the activation of the low molecular weight GTP-binding protein. It is preferable because it can be performed. In a preferred embodiment, the low-molecular-weight GTP-binding protein and the low-molecular-weight GTP-binding protein in the monitor protein are bound to the target protein of the low-molecular-weight GTP-binding protein at the target protein binding site of the low-molecular-weight GTP-binding protein present on the amino-terminal side. An embodiment in which the carboxy terminal is directly or indirectly bound to the amino terminal of the target protein present on the carboxyl terminal side (1), wherein the carboxyl terminal of the target protein present on the amino terminal side is present on the carboxyl terminal side (2) that is directly or indirectly bound to the amino terminus of the target protein binding site of the low molecular weight GTP-binding protein. In particular, when the low-molecular-weight GTP-binding protein belongs to the family of Ras family, the embodiment (1) is the one belonging to the family of Rho family. In this case, embodiment (2) is preferred. The GFP acceptor protein and GFP donor protein have their amino or carboxyl termini directly or indirectly to the amino or carboxyl terminus of a product in which a low molecular weight GTP-binding protein and a target protein are linked (linked product). And connected. Among them, a monitor protein in which the carboxyl terminal of the GFP receptor protein is directly or indirectly connected to the carboxyl terminal of the GFP receptor protein at the amino terminal of the ligated product is preferable. Therefore, as the monitor protein of the present invention, in the monitor protein, a GFP receptor protein, a low molecular weight GTP binding protein, a target protein of the low molecular weight GTP binding protein, and a GFP dona protein from the amino terminal side. Or directly or indirectly from the amino terminus side to become the GFP receptor protein, the target protein of the low molecular weight GTP binding protein, the low molecular weight GTP binding protein, and the GFP donor protein, respectively. Those connected are particularly preferred. The “indirect linking” refers to a mode in which the linking between proteins is performed, for example, via a peptide or the like as a spacer described later.
本発明のモニタータンパク質の構成要素である低分子量 GTP結合タンパク質 としては、 当該夕ンパク質として知られるものであれば特に限定されるものでは ないが、 有用性の観点から R a sスーパーファミリーに属するものが好ましく、 中でも Ra sフアミリーまたは Rhoファミリーに属するものがより好ましい。 より詳しくは、 H— Ra s、 K— Ra s、 N— Ra s、 R— Ra s、 R a p 1 A 、 Rap l B、 Rap 2A、 および R a p 2 Bからなる群、 または Rho A、 R hoB、 RhoC、 Ra c 1、 Ra c 2、 および Cdc 42からなる群より選ば れる 1種が好ましい。 The low-molecular-weight GTP-binding protein that is a component of the monitor protein of the present invention is not particularly limited as long as it is known as the protein, but it belongs to the Ras superfamily from the viewpoint of usefulness. Are preferable, and among them, those belonging to the Ras family or the Rho family are more preferable. More specifically, the group consisting of H—Ras, K—Ras, N—Ras, R—Ras, Rap1A, RapB, Rap2A, and Rap2B, or RhoA, R One selected from the group consisting of hoB, RhoC, Rac1, Rac2, and Cdc42 is preferred.
一方、 前記低分子量 GTP結合タンパク質の標的タンパク質は、 前記例示する ような各低分子量 G T P結合タンパク質が G T P結合型となつた際に特異的に結 合するものであれば特に限定されるものではない。 有用性の観点から、 好ましく は Ra f または Ra 1 GDS, あるいは Pa kまたは mD i aである。 On the other hand, the target protein of the low-molecular-weight GTP-binding protein is not particularly limited as long as each low-molecular-weight GTP-binding protein specifically binds to the GTP-binding protein as exemplified above. . Preferred from the viewpoint of usefulness Is Ra f or Ra 1 GDS, or Pak or mDia.
さらに、 前記低分子量 GTP結合タンパク質と前記標的タンパク質の組み合わ せとしては、 有用性ならびに特異性の観点から、 低分子量 GTP結合タンパク質 が H— Ra sであり、 標的タンパク質が R a fである組み合わせ、 または低分子 量 GTP結合タンパク質が Rap 1 Aであり、 標的タンパク質が Ra 1 GDSで ある組み合わせ、 低分子量 GTP結合タンパク質が Ra c 1であり、 標的タンパ ク質が Pa kである組み合わせ、 低分子量 GTP結合タンパク質が Cd c 42で あり、 標的タンパク質が Pa kである組み合わせ、 あるいは低分子量 GTP結合 タンパク質が R ho Aであり、 標的タンパク質が mD i aである組み合わせが特 に好ましい。 Further, as a combination of the low-molecular-weight GTP-binding protein and the target protein, from the viewpoint of utility and specificity, a combination in which the low-molecular-weight GTP-binding protein is H-Ras and the target protein is Raf, or A combination in which the low-molecular-weight GTP-binding protein is Rap1A and the target protein is Ra1GDS, a combination in which the low-molecular-weight GTP-binding protein is Rac1 and the target protein is Pak, and a low-molecular-weight GTP-binding Particularly preferred is a combination in which the protein is Cdc42 and the target protein is Pak, or a combination in which the low molecular weight GTP-binding protein is RhoA and the target protein is mDia.
また、 GFPァクセプタ一タンパク質としては前記例示した GFP関連タンパ ク質のいずれを使用することもできるが、 機能的観点から、 好ましくは EGFP または EYFPである。 一方の GFPドナータンパク質も同様に前記例示した G FP関連タンパク質のいずれを使用することもできるが、 機能的観点から、 好ま しくは ECFPまたは EBFPである。 As the GFP receptor protein, any of the GFP-related proteins exemplified above can be used, but from a functional viewpoint, EGFP or EYFP is preferable. Similarly, any one of the GFP-related proteins exemplified above can be used as the GFP donor protein, but from the functional viewpoint, it is preferably ECFP or EBFP.
前記した本発明のモニタ一タンパク質の構成要素それぞれの特に好ましい組み 合わせとしては、 有効性、 特異性および感度の観点から、 低分子量 GTP結合夕 ンパク質が H— R a sであり、 標的タンパク質が R a fであり、 GFPドナー夕 ンパク質が EC FPであり、 GF Pァクセプタータンパク質が EYFPであるか 、 または、 低分子量 GTP結合タンパク質が Rap 1 Aであり、 標的タンパク質 が Ra l GDSであり、 GFPドナータンパク質が ECFPであり、 GFPァク セプタ一タンパク質が EYFPであるか、 または低分子量 GTP結合タンパク質 が Ra c 1であり、 標的タンパク質が Pa kであり、 GFPドナータンパク質が ECFPであり、 GFPァクセプタ一タンパク質が EYFPであるか、 または低 分子量 GTP結合タンパク質が Cd c 42であり、 標的タンパク質が Pa kであ り、 GFPドナ一タンパク質が ECFPであり、 GFPァクセプタ一タンパク質 が EYFPであるか、 または低分子量 GTP結合タンパク質が Rh o Aであり、 標的タンパク質が mD i aであり、 GFPドナ一タンパク質が E C F Pであり、 GFPァクセプ夕一タンパク質が EYFPである。 Particularly preferred combinations of the above-mentioned components of the monitor protein of the present invention include, from the viewpoints of efficacy, specificity and sensitivity, the low molecular weight GTP-binding protein is H-Ras, and the target protein is R af, the GFP donor protein is ECFP, the GFP receptor protein is EYFP, or the low molecular weight GTP-binding protein is Rap1A, and the target protein is Ra1 GDS, GFP donor protein is ECFP, GFP receptor protein is EYFP, or low molecular weight GTP binding protein is Rac 1, target protein is Pak, GFP donor protein is ECFP, GFP If the receptor protein is EYFP, or the low molecular weight GTP-binding protein is Cdc42, the target protein is Pak, and the GFP donor protein is ECFP, GFP receptor-protein Is EYFP, or the low-molecular-weight GTP-binding protein is RhA, the target protein is mDia, the GFP donor protein is ECFP, and the GFP receptor protein is EYFP.
また、 低分子量 GTP結合タンパク質、 標的タンパク質、 GFPドナ一タンパ ク質、 および GFPァクセプタータンパク質の結合の順序は、 FRET効率の差 の増大の観点から、 本発明のモニタータンパク質において、 好ましくはァミノ末 端側より EYFP— H- Ra s— Ra f — E C F Pまたは E YF P -R a p 1 A — Ra l GDS— ECFP、 あるいは E Y F P— P a k— R a c 1— ECFP、 EYFP-Pak-Cdc 42— E C F Pまたは E YF P—mD i a-RhoA — ECFPが挙げられる。 また、 これらにおいて EYFPと ECFPとが互いに 交換されてなるものも好適に使用できる。 In addition, the order of binding of the low-molecular-weight GTP-binding protein, the target protein, the GFP donor protein, and the GFP receptor protein is preferably determined in the monitor protein of the present invention from the viewpoint of increasing the difference in FRET efficiency. EYFP—H-Ras—Ra f—ECFP or EYFP—R ap 1 A—Ra l GDS—ECFP, or EYFP—Pak—R ac 1—ECFP, EYFP-Pak-Cdc 42— ECFP or EYF P—mDia-RhoA—ECFP. In these, those obtained by exchanging EYFP and ECFP for each other can also be suitably used.
低分子量 GTP結合夕ンパク質は、 その標的夕ンパク質に結合することができ れば該タンパク質の一部でもよく、 必ずしも、 その全部 (全長) である必要はな レ、。 ここで、 低分子量 GTP結合タンパク質の一部とは、 たとえば、 公知の方法 に従って当該タンパク質分子を大腸菌で生産し、 試験管内で G T Pと結合せしめ るという方法により、 標的タンパク質との結合が検出され得るタンパク質部分を いう。 なお、 検出は、 たとえば、 標的タンパク質に対する抗体で免疫沈澱させ、 G T P結合夕ンパク質の一部が共沈するかをィムノブロッテイングで調べる方法 により行うことができる。 たとえば、 H— R a sおよび R a ρ 1 Aであれば、 好 ましくは 1〜1 80位、 より好ましくは 1〜172位に相当するアミノ酸配列部 分からなるタンパク質部分を、 R— Ra sであれば、 好ましくは 1〜204位、 より好ましくは 28〜204位に相当するアミノ酸配列部分からなるタンパク質 部分、 Ra c 1であれば、 好ましくは 1〜177位に相当するアミノ酸配列部分 からなるタンパク質部分を、 Cdc 42であれば、 好ましくは 1〜176位に相 当するァミノ酸配列部分からなる夕ンパク質部分を、 R h 0 Aであれば好ましく は 1〜1 76位に相当するアミノ酸配列部分からなるタンパク質部分を挙げるこ とができる。 The low-molecular-weight GTP-binding protein may be a part of the protein as long as it can bind to the target protein, and need not necessarily be the entire (full-length) protein. Here, a part of the low-molecular-weight GTP-binding protein is, for example, a method in which the protein molecule is produced in Escherichia coli according to a known method, and bound to GTP in a test tube, whereby the binding to the target protein can be detected. Refers to the protein part. The detection can be carried out, for example, by immunoprecipitation with an antibody against the target protein and examining by immunoblotting whether a part of GTP-bound protein is coprecipitated. For example, in the case of H—Ras and Raρ1A, a protein portion consisting of an amino acid sequence portion preferably corresponding to positions 1-180, more preferably positions 1-172 is represented by R-Ras. If present, preferably a protein portion comprising an amino acid sequence portion corresponding to positions 1 to 204, more preferably 28 to 204; if Rac 1, a protein portion preferably comprising an amino acid sequence portion corresponding to positions 1 to 177 If Cdc42, the amino acid sequence portion consisting of the amino acid sequence portion preferably corresponding to positions 1 to 176 if Cdc42, and the amino acid sequence preferably corresponding to positions 1 to 176 if Rh0A List the protein part consisting of Can be.
一方、 低分子量 GTP結合タンパク質の全部よりはむしろ、 そのアミノ酸配列 のァミノ末端あるいはカルボキシル末端を一部削ることでしばしば F R E T効率 の差の増大が生ずる。 それゆえ、 当該タンパク質の一部としては、 そのアミノ酸 配列のァミノ末端領域および/またはカルボキシル末端領域に、 好ましくは少な くとも 1個、 より好ましくは 1〜28個、 さらに好ましくは 1 7〜28個のアミ ノ酸の欠損を有してなるものも含まれる。 なお、 かかる領域におけるアミノ酸の 欠損部位には特に限定はない。 たとえば、 H— Ra sの場合、 C末端を 1 72位 まで削ったものが 1 80位まで削ったものより FRET効率の差を増大させた。 すなわち、 そのァミノ酸配列のカルボキシル末端領域において好ましくは少なく とも 1個、 より好ましくは 9〜20個、 さらに好ましくは 1 7個のアミノ酸の欠 損を有してなるものが好ましい。 また、 R— Ra sの場合、 ァミノ末端から 28 個のアミノ酸を削つたものが削らないものよりも FRE T効率の差を増大させた 。 すなわち、 そのアミノ酸配列のァミノ末端領域において好ましくは少なくとも 1個、 より好ましくは 1〜28個、 さらに好ましくは 28個のアミノ酸の欠損を 有してなるものが好ましい。 On the other hand, truncating the amino or carboxyl terminus of the amino acid sequence, rather than the entire low molecular weight GTP binding protein, often results in an increase in the difference in FRET efficiency. Therefore, as a part of the protein, at least one, more preferably 1 to 28, and still more preferably 17 to 28 amino acid sequences are preferably present in the amino terminal region and / or the carboxyl terminal region of the amino acid sequence. And those having an amino acid deficiency. The amino acid deletion site in such a region is not particularly limited. For example, in the case of H-Ras, the difference in FRET efficiency was greater when the C-terminus was truncated to position 172 than when it was truncated to position 180. That is, the amino acid sequence preferably has at least one, more preferably 9 to 20, and more preferably 17 amino acids in the carboxyl-terminal region of the amino acid sequence. Also, in the case of R-Ras, the difference in FRET efficiency was greater when the 28 amino acids were deleted from the amino terminal than when the amino acid was not deleted. That is, the amino acid sequence preferably has a deletion of at least 1, more preferably 1 to 28, and even more preferably 28 amino acids in the amino terminal region of the amino acid sequence.
なお、 前記アミノ末端領域または力ルポキシル末端領域とは、 低分子量 G T P 結合夕ンパク質のァミノ酸配列において、 そのァミノ末端またはカルボキシル末 端から、 アミノ酸の個数で好ましくは 30個までの領域をいう。 The amino-terminal region or lipoxyl-terminal region refers to a region, preferably up to 30 amino acids in number, from the amino terminal or carboxyl terminal in the amino acid sequence of the low molecular weight GTP-binding protein.
また、 標的タンパク質も、 対応する低分子量 GTP結合タンパク質に結合する ことができれば該タンパク質の一部でもよく、 必ずしも、 その全部 (全長) であ る必要はない。 ここで、 標的タンパク質の一部とは、 前記低分子量 GTP結合夕 ンパク質と同様の方法において、 その対応する低分子量 GTP結合タンパク質と の結合が検出され得るタンパク質部分をいう。 たとえば、 Ra f (GenBank/E BL 了クセ 'rンヨン番号: X03484) であれば、 好ましくは Ra s結合領域 (RBD) 、 詳し くは、 好ましくは 5 1〜204位、 より好ましくは 5 1〜1 3 1位に相当するァ ミノ酸配列部分からなるタンパク質部分を、 Ra l GDS (GenBank/EMBL了クセッシ ヨン番号: U14417) であれば、 好ましくは 202〜30 9位、 より好ましくは 2 1 1〜297位に相当するアミノ酸配列部分からなるタンパク質部分を、 P ak 1In addition, the target protein may be a part of the corresponding low molecular weight GTP-binding protein as long as it can bind to the corresponding low molecular weight GTP-binding protein, and does not necessarily need to be the whole (full length). Here, the part of the target protein refers to a protein part in which the binding to the corresponding low molecular weight GTP-binding protein can be detected in the same manner as in the low molecular weight GTP-binding protein. For example, if it is Ra f (GenBank / EBL terminology number: X03484), it is preferably the Ras binding region (RBD), more preferably, the position 51 to 204, more preferably the position 51 to 204. 1 3 1st place If the protein portion comprising the amino acid sequence portion is Ra1 GDS (GenBank / EMBL accession number: U14417), an amino acid sequence corresponding to preferably positions 202 to 309, more preferably positions 211 to 297 Pak1
(GenBank/EMBL了クセ ンヨン番号:薩 02576) であれば、 好ましくは R a c 1結合領 域、 詳しくは 68〜1 50位に相当するアミノ酸配列部分からなるタンパク質部 分を、 mD i a 1 (GenBank/EMBLァクセッション番号: E17361) であれば、 好ましくは R h o結合領域、 詳しくは 68〜24 0位、 さらに好ましくは、 68〜1 8 0位 に相当するアミノ酸配列部分からなるタンパク質部分を挙げることができる。 一方、 GFPドナータンパク質および/または GFPァクセプタータンパク質 も、 FRETのペア一となる機能が保たれていればそれらタンパク質の一部でも よく、 必ずしも全部 (全長) である必要はない。 しばしば、 それらのアミノ酸配 列のカルボキシル末端を短くすることにより、 FRE T効率の差の増大が生ずる 。 たとえば、 GFPァクセプタータンパク質および または GFPドナータンパ ク質の一部としては、 それらのアミノ酸配列のカルボキシル末端領域に好ましく は少なくとも 1個、 より好ましくは 1〜1 1個の欠損を有してなるものを挙げる ことができる。 なお、 かかる領域におけるアミノ酸の欠損部位には特に限定はな い。 たとえば、 EYFPの場合、 そのアミノ酸配列のカルボキシル末端領域にお いて好ましくは少なくとも 1個、 より好ましくは 1〜1 1個、 さらに好ましくは(GenBank / EMBL completion number: Sat 02576), preferably, a protein region consisting of an amino acid sequence portion corresponding to the Rac1 binding region, more specifically, the amino acid sequence portion corresponding to positions 68 to 150, is mDia1 (GenBank / EMBL accession number: E17361), preferably a protein portion comprising an amino acid sequence portion corresponding to the Rho binding region, more specifically, positions 68 to 240, and more preferably positions 68 to 180. be able to. On the other hand, the GFP donor protein and / or the GFP receptor protein may be a part of the protein as long as the function of pairing with FRET is maintained, and it is not necessarily required to be all (full length). Frequently, shortening the carboxyl termini of their amino acid sequences results in increased differences in FRET efficiency. For example, as a part of the GFP receptor protein and / or the GFP donor protein, those having preferably at least one, more preferably 1 to 11 deletions in the carboxyl terminal region of their amino acid sequences. Can be mentioned. The amino acid deletion site in such a region is not particularly limited. For example, in the case of EYFP, it is preferably at least one, more preferably 1-11, and still more preferably in the carboxyl terminal region of the amino acid sequence.
1 1個のアミノ酸の欠損を有してなるものが好ましい。 また、 ECFPの場合、 そのァミノ酸配列のカルボキシル末端領域において好ましくは少なくとも 1個、 より好ましくは 1〜1 1個、 さらに好ましくは 1 1個のアミノ酸の欠損を有して なるものが好ましい。 ここで、 カルボキシル末端領域とは、 本発明に使用する G FP関連タンパク質のアミノ酸配列において、 その力ルポキシル末端から、 アミ ノ酸の個数で好ましくは 1〜20個までの、 より好ましくは 1 1個までの領域を いう。 なお、 FRETのペア一となる機能が保たれているか否かは、 たとえば、 公知の方法に従い FRETのペアを形成すると想定される 1対のタンパク質分子 を共に大腸菌で生産し、 当該 1対のタンパク質を含む細胞抽出液において、 当該 タンパク質それぞれの想定される励起波長での蛍光強度を観察するという方法に より評価することができる。 Those having a deletion of one amino acid are preferred. In the case of ECFP, it is preferable that the amino acid sequence has a deletion of at least one, more preferably 1 to 11, and even more preferably 11 amino acids in the carboxyl terminal region of the amino acid sequence. Here, the carboxyl terminal region refers to the amino acid sequence of the GFP-related protein used in the present invention, from its lipoxyl end to the number of amino acids, preferably from 1 to 20, more preferably 11 The area up to. Whether the FRET pair function is maintained or not is determined by, for example, a pair of protein molecules that are assumed to form a FRET pair according to a known method. Can be produced in Escherichia coli, and the cell extract containing the pair of proteins can be evaluated by observing the fluorescence intensity at the expected excitation wavelength of each of the proteins.
さらに、 GFPァクセプタ一タンパク質および/または GFPドナータンパク 質は変異を有していてもかまわない。 かかる変異の導入は、 FRETのペア一と なる機能が保たれている限り、 GFPァクセプ夕一タンパク質および または G F Pドナー夕ンパク質のァミノ酸配列における任意の部位に対し行うことができ る。 たとえば、 変異の態様としては複数のアミノ酸の置換が挙げられ、 かかるァ ミノ酸置換の具体的態様としては、 たとえば、 Phe 64Leu、 Va 1 68 L eu、 Se r 72Al a、 I l e l 67 T h rなどが挙げられる。 このような変 異を導入することで発色団形成効率の上昇や、 F R E T効率の上昇などの効果が 得られるので好ましい。 変異の導入は、 公知の制限酵素を用いる方法や、 PCR (ポリメラーゼ連鎖反応) を用いる方法により行うことができる。 Further, the GFP receptor protein and / or the GFP donor protein may have a mutation. Such a mutation can be introduced into any site in the amino acid sequence of the GFP receptor protein and / or the GFP donor protein, as long as the function of pairing with FRET is maintained. For example, mutations include substitution of a plurality of amino acids. Specific examples of such amino acid substitutions include, for example, Phe64Leu, Va168Leu, Ser72Ala, Ile67Thr and the like. Is mentioned. It is preferable to introduce such a variation since effects such as an increase in chromophore formation efficiency and an increase in FRET efficiency can be obtained. Mutation can be introduced by a method using a known restriction enzyme or a method using PCR (polymerase chain reaction).
また、 低分子量 G T P結合タンパク質および またはその標的タンパク質に変 異を導入したものも本発明において好適に使用することができる。 例えば点突然 変異を導入することにより、 グァニンヌクレオチド交換因子や G T Pァーゼ活性 化因子に対する感受性を向上させたものを得ることができる。 かかる変異の導入 は、 互いに結合する機能が保たれている限り、 低分子量 GTP結合タンパク質お よび またはその標的タンパク質のアミノ酸配列における任意の部位に対し行う ことができる。 たとえば、 変異の態様としてはアミノ酸の置換、 挿入、 欠失など が挙げられ、 具体的には、 たとえば、 H— R a sのアミノ酸配列において I 1 e 36を L e uに変化させる態様 ( I 1 e 36 L e u)が挙げられる。 かかる H— Ra sにおける変異により、 当該 H— Ra sは、 多数の変異の中でも GTPァー ゼ活性化因子に対し最も高い感受性を示すようになる。 その結果、 モニタータン パク質のダイナミックレンジを変化させることができる。 かかる変異を有する H 一 R a sは、 本発明のモニタータンパク質において好適に使用することができる 。 なお、 変異の導入は、 公知の制限酵素を用いる方法や、 PCRを用いる方法に より行うことができる。 In addition, low-molecular-weight GTP-binding proteins and / or their target proteins into which mutations have been introduced can also be suitably used in the present invention. For example, by introducing a point mutation, a mutant having improved sensitivity to guanine nucleotide exchange factor or GTPase activator can be obtained. Such a mutation can be introduced into any site in the amino acid sequence of the low molecular weight GTP-binding protein and / or its target protein as long as the function of binding to each other is maintained. For example, examples of the mutation include amino acid substitution, insertion, and deletion. Specifically, for example, an embodiment in which I 1 e 36 is changed to Leu in the amino acid sequence of H—Ras (I 1 e 36 L eu). Such mutations in H-Ras make the H-Ras most sensitive to the GTPase activator, among many mutations. As a result, the dynamic range of the monitor protein can be changed. H-Ras having such a mutation can be suitably used in the monitor protein of the present invention. . The mutation can be introduced by a method using a known restriction enzyme or a method using PCR.
本発明のモニタータンパク質においては、 構成要素である各タンパク質の空間 的な配置は、 その機能発現に関連する因子である。 かかる配置を変化させること により FRET効率の差を非常に増大させることができる。 たとえば、 モニター タンパク質における各構成タンパク質間にスぺ一サ一となるペプチド配列を入れ 、 FRET効率の差を調節することができる。 かかるスぺーサ一は、 FRET効 率の差を増大させる観点から、 低分子量 GTP結合タンパク質と標的タンパク質 との間に挿入することが好ましい。 スぺ一サ一となるペプチド配列としては、 好 ましくは 1〜30個、 より好ましくは 1〜10個の連続した任意のアミノ酸から なるぺプチドを挙げることができる。 かかるぺプチドを低分子量 GTP結合タン パク質と標的タンパク質との間に挿入した場合、 FRET効率の差が増大するこ と、 GFP関連タンパク質自身の折りたたみの効率が上昇することなどが期待で きる。 また、 各構成タンパク質が、 本発明のモニタータンパク質内において適切 なコンフオメーシヨンをとり得る観点から、 好ましくはグリシンを主とする低分 子で二次構造を形成しにくいという性質を有するァミノ酸からなるぺプチドをス ぺ一サ一として用いることが好ましい。 In the monitor protein of the present invention, the spatial arrangement of the constituent proteins is a factor related to the expression of their functions. By changing such an arrangement, the difference in FRET efficiency can be greatly increased. For example, it is possible to adjust the difference in FRET efficiency by inserting a peptide sequence serving as a spacer between the constituent proteins in the monitor protein. Such a spacer is preferably inserted between the low-molecular-weight GTP-binding protein and the target protein from the viewpoint of increasing the difference in FRET efficiency. Preferable peptide sequences include peptides consisting of preferably 1 to 30, more preferably 1 to 10 consecutive arbitrary amino acids. When such a peptide is inserted between the low-molecular-weight GTP-binding protein and the target protein, it is expected that the difference in FRET efficiency will increase, and that the efficiency of folding of the GFP-related protein itself will increase. In addition, from the viewpoint that each constituent protein can take an appropriate conformation in the monitor protein of the present invention, it is preferable to use an amino acid having a property that it is difficult to form a secondary structure with a small molecule mainly composed of glycine. It is preferable to use such a peptide as a sensor.
また、 本発明のモニタ一タンパク質のァミノ酸配列のァミノ末端および また はカルボキシル末端に他のタンパク質あるいはべプチドを融合することも好まし い態様の 1つである。 特に、 該モニタ一タンパク質に、 細胞内局在シグナル、 た とえば、 公知の小胞体 (ER)移行シグナル、 細胞膜局在シグナルなどを付加す ることにより、 細胞内の局所での G T P結合タンパク質の活性化を直接測定する ことが可能となり好ましい。 また、 後述するように、 細胞内の局所での GTP結 合タンパク質の GTP結合型と GDP結合型の量比 (GTPZGDP比) (モル 比) を直接測定することも可能となり好ましい。 It is also a preferred embodiment to fuse another protein or peptide to the amino terminal and / or carboxyl terminal of the amino acid sequence of the monitor protein of the present invention. In particular, by adding an intracellular localization signal, such as a known ER (local endoplasmic reticulum) (ER) translocation signal and a cell membrane localization signal, to the monitor protein, the GTP-binding protein is localized in the cell. Activation can be directly measured, which is preferable. In addition, as will be described later, it is also possible to directly measure the amount ratio (GTPZGDP ratio) (molar ratio) of GTP-bound to GDP-bound GTP-bound proteins in a cell locally.
本発明のモニタ一夕ンパク質では、 G T Pが結合し低分子量 G T P結合夕ンパ ク質が活性化された場合、 該モニタ一タンパク質内で低分子量 GTP結合タンパ ク質と標的タンパク質との結合が誘導され全体のコンフォメーションが変化する ことになり、 GFPァクセプタ一タンパク質と GFPドナータンパク質との距離 と方向とが変化する。 次いで、 特定の波長の光を照射すると、 かかるァクセプ夕 —タンパク質とドナータンパク質との間で FRET効率の増加が検出されるよう になる (第 2図) 。 このような FRET効率の変化には、 前記モニタ一タンパク 質のコンフオメ一シヨン変化後における GFPァクセプタータンパク質と GFP ドナ一タンパク質の配置が影響する。 たとえば、 GFPドナータンパク質と GF Pァクセプタータンパク質との距離が短くなると F R E T効率は増加し、 距離が 長くなると FRET効率は減少する。 FRET効率の変化の幅、 すなわち、 FR ET効率の差の増減は、 たとえば、 用いる各構成タンパク質の性質により、 スぺ —サ一べプチド等の挿入により、 所望により適宜調節することができる。 In the monitor protein of the present invention, GTP binds to the low molecular weight GTP-bound protein. When the protein is activated, the binding of the low-molecular-weight GTP-binding protein to the target protein is induced in the monitor protein, resulting in a change in the overall conformation, and the GFP receptor protein and the GFP donor protein are changed. The distance and the direction change. Then, irradiation with light of a specific wavelength causes the increase in FRET efficiency to be detected between such a protein and the donor protein (Fig. 2). Such changes in the FRET efficiency are affected by the arrangement of the GFP receptor protein and the GFP donor protein after the conformational change of the monitor protein. For example, the shorter the distance between the GFP donor protein and the GFP receptor protein, the higher the FRET efficiency, and the longer the distance, the lower the FRET efficiency. The width of the change in the FRET efficiency, that is, the increase or decrease in the difference in the FRET efficiency can be appropriately adjusted as desired by inserting a spacer peptide or the like, for example, depending on the properties of each constituent protein used.
なお、 上述する本発明のモニタ一タンパク質が本発明の所望の効果を発現し得 るか否かについての評価は、 たとえば、 後述の実施例 1に記載の方法に準じて評 価することができる。 The above-described evaluation as to whether the monitor protein of the present invention can exhibit the desired effect of the present invention can be performed, for example, according to the method described in Example 1 described below. .
本発明はまた、 本発明のモニタ一タンパク質をコードする遺伝子を提供する。 かかる遺伝子は、 該タンパク質の前記各構成タンパク質の遺伝子情報を G e n B ank等から入手し、 公知の PCRを用いた方法により、 あるいは制限酵素とリ ガーゼとを用いた方法により常法に従つて作製することができる。 The present invention also provides a gene encoding the monitor protein of the present invention. Such a gene is obtained by obtaining the genetic information of each of the constituent proteins of the protein from GenBank or the like, and using a known PCR method or a method using a restriction enzyme and a ligase according to a conventional method. Can be made.
本発明のモニタータンパク質の構成タンパク質として好適に用いられる各夕ン パク質の G e n B a n kZEMB Lにおけるァクセッション番号を以下に示す。 なお、 ァクセッション番号は各タンパク質名の後の括弧内に示す。 The accession numbers in GenBankZEMB L of each protein suitably used as a constituent protein of the monitor protein of the present invention are shown below. The accession number is shown in parentheses after each protein name.
(1)低分子量 GTP結合タンパク質 (1) Low molecular weight GTP-binding protein
H-R a s (V00574)、 K-R a s (L00045〜L00049)、 N-R a s (L00040 〜L00043)、 R-R a s (M14948, M14949)、 Ra 1 A (X12533)、 R a p 1 B (X08004)、 Rap 2A (X12534)、 Rap 2B (X52987)、 R h o A (L250 80)、 Rh o B (X06820)、 R h o C (X06821)、 R a c 1 (M29870)、 R a c 2 (NM002872)、 R a c 3 (NM005052)、 C d c 42 (M57298) HR as (V00574), KR as (L00045-L00049), NR as (L00040-L00043), RR as (M14948, M14949), Ra 1 A (X12533), R ap 1 B (X08004), Rap 2A (X12534) , Rap 2B (X52987), R ho A (L250 80), Rh o B (X06820), R ho C (X06821), R ac 1 (M29870), R ac 2 (NM002872), R ac 3 (NM005052), C dc 42 (M57298)
(2)標的タンパク質 (2) Target protein
R a f (X03484)、 Ra 1 GDS (U14417)、 P a k 1 (NM002576)、 mD i a 1 (E17361) Raf (X03484), Ra1 GDS (U14417), Pak1 (NM002576), mDia1 (E17361)
(3) GFPドナータンパク質と GFPァクセプタータンパク質 (3) GFP donor protein and GFP receptor protein
EGFP (U76561)、 EYFP (AVU73901 1)、 ECFP (AB041904) なお、 EBFP (GFPに以下の 3つの変異を有するものである : Ph e 64 EGFP (U76561), EYFP (AVU73901 1), ECFP (AB041904) EBFP (GFP has the following three mutations: Ph e 64
Leu, Ty r 66 H i s, Ty r 145 Ph e) については文献 6に記載され ている。 Leu, Tyr66His, and Tyr145Phe) are described in Ref.
本発明はさらに、 前記遺伝子を含む発現ベクターを提供する。 かかるベクター は、 公知の方法に従い、 本発明のモニタ一タンパク質をコードする遺伝子を公知 の原核細胞発現ベクター、 例えば pGEX— 2T (アマシャム—フアルマシア バイオテック社製) 、 真核細胞発現ベクター、 例えば pCAGGS (文献 7) に 、 あるいはウィルスベクタ一、 例えば p Shu t t 1 e (CLONTECH社製 ) に挿入することにより得ることができる。 発現べクタ一としては発現プラスミ ドが好ましい。 The present invention further provides an expression vector containing the gene. According to a known method, such a vector may be a known prokaryotic cell expression vector such as pGEX-2T (Amersham-Pharmacia Biotech), a eukaryotic cell expression vector such as pCAGGS (for example, pGEX-2T). Reference 7) or by insertion into a viral vector, for example, p Shutt 1 e (manufactured by CLONTECH). The expression vector is preferably an expression plasmid.
本発明はさらに、 前記発現べクタ一を保持する形質転換された細胞およびトラ ンスジエニック動物を提供する。 かかる細胞は、 前記発現ベクターを対象とする 細胞に導入することにより得られる。 細胞への導入法としては公知のトランスフ ェクシヨン法やウィルス感染法が使用でき特に制限はないが、 たとえばリン酸カ ルシゥム法、 リポフエクシヨン法、 あるいはエレクト口ポレーシヨン法等が使用 できる。 該細胞としては真核細胞あるいは原核細胞を用いることができ、 特に制 限はない。 たとえば、 真核細胞としては、 ヒト胎児腎臓由来 HEK 293 T細胞 、 サル腎臓由来 COS細胞、 ヒト臍帯由来 HUVEC細胞、 酵母など、 原核細胞 としては、 大腸菌など、 培養細胞や、 その他、 各種細胞を使用できる。 一方、 前 記発現べクタ一を公知の方法、 たとえば、 マウス受精卵の核内にプラスミ ド DN Aをマイクロインジヱクションする方法などにより、 マウス等の個体に直接導入 することでトランスジェニック動物を得ることができる。 The present invention further provides transformed cells and transgenic animals that carry the expression vector. Such cells can be obtained by introducing the expression vector into target cells. A known transfection method or a virus infection method can be used as a method for introduction into cells, and there is no particular limitation. For example, a calcium phosphate method, a lipofection method, or an electoral poration method can be used. Eukaryotic cells or prokaryotic cells can be used as the cells, and there is no particular limitation. For example, eukaryotic cells include human embryonic kidney-derived HEK293 T cells, monkey kidney-derived COS cells, human umbilical cord-derived HUVEC cells, yeast, etc.Prokaryotic cells include cultured cells such as Escherichia coli, and other various cells. it can. Meanwhile, before Transgenic animals can be obtained by directly introducing the expression vector into an individual such as a mouse by a known method, for example, by microinjecting plasmid DNA into the nucleus of a fertilized mouse egg. it can.
本発明においてはさらに、 本発明のモニタ一タンパク質を用いる低分子量 GT P結合タンパク質の活性化を測定する方法を提供する。 かかる方法によれば、 本 発明のモニタ一タンパク質における FRETを検出することで低分子量 GTP結 合タンパク質の活性化を測定することができる。 また、 前記する本発明の形質転 換された細胞またはトランスジェニック動物において FRETを検出し、 当該細 胞または動物における低分子量 G T P結合タンパク質の活性化を直接測定するこ ともできる。 かかる場合、 別途、 GTPの結合した低分子量 GTP結合タンパク 質と GTPからの無機リン酸の遊離によって生じる GDPの結合した低分子量 G TP結合タンパク質とを測定して GTPZGDP比 〔または GTPZ (GDP + GTP)比〕 (いずれもモル比) を算出し、 さらに対応する FRET効率を測定 して予め検量線を作成しておけば、 当該細胞または動物における FRET効率に 基づいて、 GTPノ GDP比を算出することができる。 The present invention further provides a method for measuring the activation of a low molecular weight GTP binding protein using the monitor protein of the present invention. According to such a method, activation of the low molecular weight GTP-binding protein can be measured by detecting FRET in the monitor protein of the present invention. Alternatively, FRET can be detected in the above-described transformed cell or transgenic animal of the present invention, and the activation of a low-molecular-weight GTP-binding protein in the cell or animal can be directly measured. In such a case, the GTP-GDP ratio (or GTPZ (GDP + GTP-GTP) is measured separately by measuring the GTP-bound low-molecular-weight GTP-binding protein and the GDP-bound low-molecular-weight GTP-binding protein produced by the release of inorganic phosphate from GTP. ) Ratio) (all are molar ratios), and if the corresponding FRET efficiency is measured and a calibration curve is prepared in advance, the GTP ratio is calculated based on the FRET efficiency of the cell or animal. be able to.
たとえば、 具体的には以下のような方法が例示される。 For example, the following method is specifically exemplified.
( 1 ) 分光光度計を用いた測定法 (1) Measurement method using a spectrophotometer
モニター夕ンパク質を発現し得る本発明の形質転換細胞を、 当該タンパク質の 発現が可能な条件下に培養する。 次いで、 当該細胞を可溶化する。 細胞の可溶化 の方法に特に制限はないが、 界面活性剤 TritonXlOOを含む溶液を用いて可溶化す る方法が好ましい。 可溶化した溶液に、 GFPドナ一タンパク質に対する励起光 (たとえば、 波長 433 nm)を照射し、 たとえば、 波長 45 Onmから 550 nmの範囲で蛍光プロフィールを公知の蛍光分光光度計を用いて測定する。 得ら れた蛍光プロフィールのデータを基に、 たとえば、 波長 475 nmにおける GF Pドナ一タンパク質の蛍光強度と波長 530 nmにおける GFPァクセプタ一夕 ンパク質の蛍光強度との比 〔 (波長 530 nmにおける蛍光強度) / (波長 47 5 nmにおける蛍光強度) 〕 を算出し、 それを GFPドナ一タンパク質から GF Pァクセプタ一タンパク質への FRET効率とする。 GTPの低分子量 GTP結 合タンパク質への結合前に比べ、 結合後 (すなわち、 低分子量 GTP結合タンパ ク質の活性化後) に FRET効率が上昇するため、 それを指標として低分子量 G TP結合タンパク質の活性化を測定する。 なお、 低分子量 GTP結合タンパク質 の活性化と不活性化は、 たとえば、 前者については、 グァニンヌクレオチド交換 因子 So s発現べクタ一 (pCAGGS— mSo s ;文献 9に記載) を本発明の モニタータンパク質を発現し得る細胞にトランスフエクトすることにより、 またThe transformed cells of the present invention that can express the monitor protein are cultured under conditions that allow expression of the protein. Next, the cells are solubilized. The method for solubilizing the cells is not particularly limited, but a solubilization method using a solution containing the detergent TritonXlOO is preferable. The solubilized solution is irradiated with excitation light (eg, at a wavelength of 433 nm) for GFP donor protein, and the fluorescence profile is measured, for example, at a wavelength in the range of 45 Onm to 550 nm using a known fluorescence spectrophotometer. Based on the obtained fluorescence profile data, for example, the ratio of the fluorescence intensity of the GFP donor protein at a wavelength of 475 nm to the fluorescence intensity of the GFP receptor protein at a wavelength of 530 nm [(Fluorescence at a wavelength of 530 nm) Intensity) / (wavelength 47 Fluorescence intensity at 5 nm)] is calculated, and this is defined as the FRET efficiency from GFP donor protein to GFP receptor protein. FRET efficiency increases after binding (that is, after activation of the low-molecular-weight GTP-binding protein) compared to before GTP-binding to the low-molecular-weight GTP-binding protein. The activation of is measured. The activation and inactivation of the low-molecular-weight GTP-binding protein can be performed, for example, by using the guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos; described in Reference 9) as the monitor protein of the present invention. By transfecting cells capable of expressing
、 上皮細胞増殖因子 (EGF) による当該細胞の刺激により行うことが、 後者に ついては、 たとえば、 GTP水解促進酵素 Gap lm発現べクタ一 (pEF— B os— Gap lm ;文献 9に記載) を当該細胞にトランスフヱクトすることによ り行うことができる。 一方、 ?1¾£丁効率は0??ドナータンパク質と GFPァ クセプ夕一タンパク質との距離および方向の変化により生ずるため、 FRET効 率の変化によりモニタ一タンパク質の構造変化をも検出することができる。 (2)顕微鏡を用いた測定法 It can be performed by stimulating the cells with epidermal growth factor (EGF). For the latter, for example, the GTP hydrolyzing enzyme Gap lm expression vector (pEF-Bos-Gap lm; described in Reference 9) is used. This can be done by transfecting the cells. on the other hand, ? 1¾ £ ¾Efficiency is 0? Since the change is caused by a change in the distance and direction between the donor protein and the GFP receptor protein, a change in the structure of the monitor protein can be detected by a change in the FRET efficiency. (2) Measurement method using a microscope
モニタータンパク質を発現した本発明の形質転換細胞またはトランスジェニッ ク動物を蛍光顕微鏡で観察し、 低分子量 GTP結合タンパク質の活性化前後に生 ずる FRET効率の変化を直接的に検出する。 なお、 低分子量 GTP結合タンパ ク質の活性化と不活性化は前記 (1)分光光度計を用いた測定法の場合と同様に して行うことができる。 The transformed cells or transgenic animals of the present invention that express the monitor protein are observed with a fluorescence microscope, and changes in FRET efficiency that occur before and after activation of the low-molecular-weight GTP-binding protein are directly detected. The activation and inactivation of the low-molecular-weight GTP-binding protein can be performed in the same manner as in the above (1) measuring method using a spectrophotometer.
用いる蛍光顕微鏡には特に制限はないが、 公知のキセノン光源を有する倒立型 蛍光顕微鏡 (Carl Zeiss, Axiovert 100) に回転式蛍光励起フィルタ一および回 転式蛍光発光フィルタ一を備え、 高感度冷却 CCDカメラを備えたものが好まし レ、。 さらにフィルタ一およびカメラ画像は、 日本口一パー社製 Metamorph画像解 析ソフトにて制御ならびに解析できるシステムが望ましい。 There is no particular limitation on the fluorescence microscope to be used, but a high-sensitivity cooled CCD equipped with a rotating fluorescence excitation filter and a rotation fluorescence emission filter in a known inverted fluorescence microscope (Carl Zeiss, Axiovert 100) having a xenon light source Those with a camera are preferred. Further, it is desirable that the filter and the camera image be controlled and analyzed by using Metamorph image analysis software manufactured by Nippon Ichi-Par.
前記細胞または動物に GFPドナータンパク質の励起光を照射し、 GFPドナ 一タンパク質の蛍光波長での画像を CCDカメラにより撮影し、 その後、 GFP ァクセプタ一タンパク質の蛍光波長での画像を撮影する。 両画像の蛍光強度の比 を測定することにより各測定点での FRET効率を算出できる。 また、 たとえば 、 グァニンヌクレオチド交換因子 So s発現べクタ一をモニタ一タンパク質を発 現し得る細胞または動物に種々の量で導入して低分子量 GTP結合タンパク質の 種々の活性化状態 (すなわち、 活性化の程度が異なる状態) を構築する。 次いで 、 各状態における細胞または動物を蛍光顕微鏡で観察し、 前記と同様にして FR ET効率を求める。 また、 各状態における細胞 (当該動物から得られた、 FRE T効率を求めた部位に由来する細胞を含む) を可溶化し、 別途、 GTPの結合し た低分子量 G T P結合タンパク質と G D Pの結合した低分子量 G T P結合夕ンパ ク質とを測定して GTPZGDP比を算出する。 詳しくは、 公知の方法 (文献 2 ) により低分子量 GTP結合タンパク質への GTP結合量および GDP結合量を 測定して GTPZGDP比を求める。 次いで、 得られた GTP DP比を、 予 め求めておいた FRET効率と関連付ける。 すなわち、 各状態での測定時点にお ける FRET効率と GTPZGDP比を測定し、 それらを基に検量線を作成する 。 このようにして別途、 検量線を作成しておけば、 モニタ一タンパク質を発現し た細胞または動物における F R E T効率を蛍光顕微鏡を用いて直接測定するだけ で、 各測定時点での F R E T効率から G T P / G D P比を求めることが可能とな る。 従って、 非侵襲的に細胞內または個体内における低分子量 GTP結合タンパ ク質の活性化状態を容易に把握することができ、 しかも、 かかる状態における G TPZGDP比を具体的に得ることができる。 なお、 かかる検量線を用いる方法 は、 前記 (1) の方法においても同様に使用することができる。 Irradiating said cells or animals with excitation light of a GFP donor protein; An image at the fluorescence wavelength of one protein is taken with a CCD camera, and then an image at the fluorescence wavelength of the GFP receptor is taken. The FRET efficiency at each measurement point can be calculated by measuring the ratio of the fluorescence intensities of both images. In addition, for example, the guanine nucleotide exchange factor Sos expression vector can be introduced into cells or animals capable of expressing the protein in various amounts to introduce various activation states (ie, activation) of the low molecular weight GTP-binding protein. States of varying degrees). Next, the cells or animals in each state are observed with a fluorescence microscope, and the FRET efficiency is determined in the same manner as described above. In addition, the cells in each state (including cells derived from the site for which FRET efficiency was obtained from the animal) were solubilized, and GTP-bound low-molecular-weight GTP-binding protein and GDP were separately bound. GTPZGDP ratio is calculated by measuring low molecular weight GTP-bound protein. Specifically, the GTPZGDP ratio is determined by measuring the amount of GTP bound to a low molecular weight GTP-binding protein and the amount of GDP bound by a known method (Reference 2). Then, the obtained GTP DP ratio is related to the FRET efficiency determined in advance. That is, the FRET efficiency and the GTPZGDP ratio at the measurement time point in each state are measured, and a calibration curve is created based on these. If a calibration curve is separately prepared in this way, the FRET efficiency in cells or animals expressing the monitor protein can be measured directly using a fluorescence microscope, and the GTP / GTP / It is possible to calculate the GDP ratio. Therefore, the activation state of the low-molecular-weight GTP-binding protein in a cell or an individual can be easily ascertained noninvasively, and the GTPZGDP ratio in such a state can be specifically obtained. The method using such a calibration curve can be similarly used in the method (1).
本発明によれば、 非侵襲的な低分子量 G TP結合タンパク質の活性化の測定を 可能にする低分子量 GTP結合タンパク質の活性モニタ一タンパク質、 その遺伝 子等が提供される。 また、 かかるモニタ一タンパク質を発現し、 非侵襲的な低分 子量 G T P結合タンパク質の活性化の測定に有用な前記発現べクタ一を保持する 形質転換された細胞およびトランスジエニック動物、 ならびに前記夕ンパク質を 用いる低分子量 GT P結合タンパク質の活性化を測定する方法が提供される。 従 つて、 低分子量 GT P結合タンパク質の活性化状態を細胞内または個体内で非侵 襲的に知ることが可能となり、 生命現象の理解のみならず、 薬剤開発 (たとえば 、 痛、 自己免疫疾患、 アレルギー性疾患等の治療剤または予防剤) において多大 な利益をもたらし得る。 According to the present invention, there is provided a protein monitor for the activity of a low-molecular-weight GTP-binding protein that enables non-invasive measurement of the activation of the low-molecular-weight GTP-binding protein, a gene thereof, and the like. In addition, it expresses such a monitor protein and retains the expression vector useful for measuring the activation of a non-invasive low molecular weight GTP-binding protein. Transformed cells and transgenic animals are provided, as well as methods for measuring the activation of low molecular weight GTP binding proteins using the protein. Therefore, it is possible to non-invasively determine the activation state of the low-molecular-weight GTP binding protein in a cell or an individual, and not only to understand life phenomena, but also to develop drugs (for example, pain, autoimmune diseases, (A therapeutic or prophylactic agent for allergic diseases, etc.).
さらに本発明の別の態様として、 低分子量 G T P結合タンパク質の活性調節物 質のスクリーニング方法を提供する。 すなわち、 Further, as another embodiment of the present invention, there is provided a method for screening a substance regulating the activity of a low molecular weight GTP binding protein. That is,
( a ) 低分子量 GT P結合タンパク質の活性モニタ一タンパク質を発現する、 当 該タンパク質の遺伝子を含む発現べクタ一を保持する形質転換された細胞と被検 物質とを接触させる工程、 ならびに (a) contacting a test substance with a transformed cell that expresses the activity monitor protein of the low-molecular-weight GTP-binding protein and that has an expression vector containing the gene of the protein; and
( b ) 低分子量 G T P結合タンパク質の活性の変化を検出する工程、 (b) detecting a change in activity of the low molecular weight GTP binding protein,
を含む、 低分子量 G T P結合タンパク質の活性調節物質のスクリーニング方法を 提供する。 It is intended to provide a method for screening a low-molecular-weight GTP-binding protein activity modulator, comprising:
本発明のスクリーニング方法によれば、 本発明の低分子量 GT P結合タンパク 質の活性モニタータンパク質を発現する細胞を構築し、 バイオアツセィ系を用い ることによって、 低分子量 G T P結合タンパク質の活性を変化させる物質または その塩 (すなわち、 低分子量 G T P結合タンパク質の活性調節物質) を効率よく スクリーニングすることができる。 当該方法における被検物質としては特に限定 されるものではないが、 たとえば、 ペプチド、 タンパク質、 非ペプチド性物質、 合成物質、 発酵生産物等を挙げることができる。 According to the screening method of the present invention, a substance that changes the activity of a low-molecular-weight GTP-binding protein is constructed by constructing a cell that expresses the activity monitor protein of the low-molecular-weight GTP-binding protein of the present invention and using a bioassay system. Alternatively, it is possible to efficiently screen for a salt thereof (ie, a modulator of the activity of a low molecular weight GTP-binding protein). The test substance in the method is not particularly limited, but examples include peptides, proteins, non-peptidic substances, synthetic substances, fermentation products, and the like.
本発明のスクリーニング方法は、 (i ) 低分子量 G T P結合タンパク質活性化 物質の存在下、 あるいは ( i i ) 当該活性化物質の非存在下において行うことが できる。 なお、 低分子量 GT P結合タンパク質活性化物質とは、 低分子量 G T P 結合タンパク質を活性化する物質であり、 たとえば、 上皮細胞増殖因子等の細胞 増殖因子、 インタ一ロイキン等のサイト力イン類を挙げることができ、 またこれ らに限定されない。 低分子量 GTP結合タンパク質の活性調節物質は、 (i) の 場合、 低分子量 G T P結合タンパク質の活性を増強あるレ、は減少させる物質とし て、 (i i) の場合、 低分子量 GTP結合タンパク質の活性を増強させる物質と してスクリーニングすることができる。 The screening method of the present invention can be carried out in the presence of (i) a low molecular weight GTP-binding protein activator, or (ii) in the absence of the activator. The low-molecular-weight GTP-binding protein activator is a substance that activates a low-molecular-weight GTP-binding protein, and includes, for example, cell growth factors such as epidermal growth factor, and cytodynamics such as interleukin. Can also this It is not limited to them. In the case of (i), the activity regulating substance of the low-molecular-weight GTP-binding protein is a substance that enhances or reduces the activity of the low-molecular-weight GTP-binding protein, and in the case of (ii), the activity of the low-molecular-weight GTP-binding protein is It can be screened as a substance to enhance.
具体的には、 本発明のスクリーニング方法は、 前記活性化物質の存在下または 非存在下に、 工程 (a) において、 本発明の低分子量 GTP結合タンパク質の活 性モニタータンパク質を発現する細胞と被検物質とを接触させる (態様 1)。 接 触させる方法は特に限定されるものではなく、 たとえば、 被検物質の存在下に当 該細胞を培養することにより行うことができる。 また、 平行して、 対照として、 同条件下、 本発明の低分子量 G T P結合夕ンパク質の活性モニタ一夕ンパク質を 発現する細胞と被検物質とを接触させない場合 (態様 2) を行う。 次いで、 工程 (b) において、 それぞれの場合における低分子量 GTP結合タンパク質の活性 を測定し、 態様 2と比較した態様 1における低分子量 GTP結合タンパク質の活 性の変化を検出することにより低分子量 G T P結合タンパク質の活性調節物質の スクリーニングを行う。 なお、 当該活性の測定は、 各々の場合における FRET 効率を測定することにより行なうことができる。 Specifically, the screening method of the present invention is characterized in that, in the step (a), in the presence or absence of the activating substance, the cell expressing the activity monitor protein of the low-molecular-weight GTP-binding protein of the present invention is treated with the cell. The sample is brought into contact with the test substance (aspect 1). The method of contacting is not particularly limited, and can be performed, for example, by culturing the cells in the presence of a test substance. In parallel, as a control, under the same conditions, the activity monitor of the low-molecular-weight GTP-binding protein of the present invention is performed (case 2), where the cells expressing the protein are not brought into contact with the test substance. Next, in step (b), the activity of the low-molecular-weight GTP-binding protein in each case is measured, and the change in the activity of the low-molecular-weight GTP-binding protein in embodiment 1 compared to embodiment 2 is detected, whereby the low-molecular-weight GTP-binding protein is detected. Screen for protein activity modulators. The activity can be measured by measuring the FRET efficiency in each case.
すなわち、 前記 (i)の場合に、 低分子量 GTP結合タンパク質の活性をより 増強する物質は、 低分子量 G TP結合夕ンパク質の活性を増強し得る活性調節物 質であり、 逆に当該活性を減少する物質は、 低分子量 GTP結合タンパク質の活 性を減少し得る活性調節物質である。 また、 前記 (i i) の場合に、 低分子量 G TP結合タンパク質の活性を増強する物質は、 低分子量 GTP結合タンパク質の 活性を増強し得る活性調節物質である。 That is, in the case of the above (i), the substance that further enhances the activity of the low-molecular-weight GTP-binding protein is an activity-regulating substance that can enhance the activity of the low-molecular-weight GTP-binding protein. A reducing agent is an activity modulator that can decrease the activity of a low molecular weight GTP binding protein. In the case of the above (ii), the substance that enhances the activity of the low-molecular-weight GTP-binding protein is an activity modulator that can enhance the activity of the low-molecular-weight GTP-binding protein.
以上の方法により、 簡便かつ迅速に低分子量 GT P結合タンパク質の活性調節 物質を得ることができる 参照文献 以下に、 本明細書において記載する参照文献を列挙する。 かかる参照文献は参 照により、 その全教示が本明細書中に取り込まれる。 なお、 本明細書中では 〔文 献 (数字) 〕 として参照する各文献の文献番号を示す。 By the above method, a substance that regulates the activity of a low-molecular-weight GTP binding protein can be obtained simply and quickly. The following is a list of references described in this specification. Such references are incorporated by reference in their entirety. In this specification, the reference number of each reference referred to as [reference (number)] is shown.
1. Bos, J. L. 1997. 「R a s様 G T Pァ一ゼ (Ras-like GTPases. ) 」 Bioc him. Biophys. Acta 1333:M19-M31. 1. Bos, J.L. 1997. "Ras-like GTPases." Biochim. Biophys. Acta 1333: M19-M31.
2. Satoh, T. and Y. Kaziro. 1995. 「刺激された造血細胞における R a s結 合グァニンヌクレオチドの測定 (Measurement of Ras-bound guanine nucleotid e in stimulated hematopoietic cells. ) J Method. Enzymol. 255: 149-155. 2. Satoh, T. and Y. Kaziro. 1995. "Measurement of Ras-bound guanine nucleotid e in stimulated hematopoietic cells." J Method. Enzymol. 255 : 149-155.
3. Franke, B. , J. W. N. Akkerman, and J. L. Bos. 1997. 「ヒト血小板にお ける迅速な R a p 1の C a 2+媒介活性化 ( Rapid Ca2+- mediated activation of Rapl in human platelets. ) J E BO J. 15 :252-259. . 3. Franke, B., JWN Akkerman , and JL Bos 1997. "C a 2+ mediated activation of your Keru rapid R ap 1 in human platelets (Rapid Ca2 + -. Mediated activation of Rapl in human platelets) JE BO J. 15: 252-259.
4. Tsien, R. Y. and A. Miyawaki. 1998. 「生細胞の機構を見る ( Seeing th e machinery of l ive cells. ) 」 Science 280: 1954-1955. 4. Tsien, R.Y. and A. Miyawaki. 1998. Seeing the machinery of living cells. Science 280: 1954-1955.
5. Pollok, B. A. and R. Heim. 1999. 「F R E Tに基づく応用における G F Pの使用 (Using GFP in FRET-based applications. ) J Trends Cell Biol. 9: 57-60. 5. Pollok, B.A. and R. Heim. 1999. "Using GFP in FRET-based applications." J Trends Cell Biol. 9: 57-60.
6. Miyawaki, A. , J. Llopis, R. Heim, J. M. McCaffery, J. A. Adams, M. Ikura, and R. Y. Tsien. 1997. 「グリーンフルオレセントプロテインとカルモ ジュリンに基づく C a 2 +の蛍光インディケ一夕一 (Fluorescent indicators for6. Miyawaki, A., J. Llopis, R. Heim, JM McCaffery, JA Adams, M. Ikura, and RY Tsien. 1997. "Ca 2+ fluorescence index based on green fluorescein protein and carmodulin. Yuichi (Fluorescent indicators for
Ca2+ based on green fluorescent proteins and calmodulin) Nature 388: 88Ca2 + based on green fluorescent proteins and calmodulin) Nature 388: 88
2-887. 2-887.
7. Niwa, H., K. Yamamura, and J. Miyazaki. 1991. 「新規真核細胞ベクター による高発現形質転換体の効率的な選抜 ( Efficient selection for high-expr ession transfectants with a novel eukaryotic vector. ) 」 Gene 108: 193-20 0. 7. Niwa, H., K. Yamamura, and J. Miyazaki. 1991. "Efficient selection for high-expression transfectants with a novel eukaryotic vector. ) '' Gene 108: 193-20 0.
8. DeClue, J. E., J. C. Stone, R. A. Blanchard, A. G. Papageorge, P. M 8. DeClue, J. E., J. C. Stone, R. A. Blanchard, A. G. Papageorge, P. M
3 i artin, K. Zhang, and D. R. Lowy. 「細胞の形質転換のための温度感受性の r a sエフェクタードメイン変異体: GTPァ一ゼ活性化タンパク質と NF— 1との 相互作用 ( A ras effector domain mutant which is temperature sensitive f or cellular transformation: interactions with GTPase-activating protein and NF-1. ) J Mol.Cell Biol. 11:3132 - 3138, 1991. 3 i artin, K. Zhang, and DR Lowy. “A temperature-sensitive ras effector domain mutant for cell transformation: Interaction between GTPase-activating protein and NF-1 (A ras effector domain mutant which is temperature sensitive f or cellular transformation: interactions with GTPase-activating protein and NF-1.) J Mol. Cell Biol. 11: 3132-3138, 1991.
9. Ohba, Y., N. Mochizuki, S. Yamashita, A. M. Chan, J. W. Schrader, S . Hattori, K. Nagashima, and M. Matsuda. 「R_Ra s、 TC- 2 1 /R-R a s 2. M-R a s/R-R a s 3の制御タンパク質 (Regulatory proteins of R-Ras, TC-21/ -Ras2, and M- as/ - as3. ) 」 Biol. Chem. 275:20020-200 9. Ohba, Y., N. Mochizuki, S. Yamashita, AM Chan, JW Schrader, S. Hattori, K. Nagashima, and M. Matsuda. "R_Ras, TC-21 / RR as 2.MR as / Regulatory proteins of R-Ras, TC-21 / -Ras2, and M-as / -as3.) Biol. Chem. 275: 20020-200
26, 2000. 26, 2000.
10. Yamashi ta, S. , N. Mochizuki, Y. Ohba, . Tobiurae, Y. Okada, H. Sawa , K. Nagashima, and M. Matsuda. 「Ga l DAG— GEF I I Iによる Ra s 、 R-R a s、 Rap 1の活性化 (GalDAG- GEFIII activation of Ras, R-Ras, and Rapl. ) 」 J. Biol. Chem. 275:25488-25493, 2000. 10. Yamashi ta, S., N. Mochizuki, Y. Ohba,. Tobiurae, Y. Okada, H. Sawa, K. Nagashima, and M. Matsuda. "Gal DAG—Ras, RR as, GEF III, Activation of Rap 1 (GalDAG-GEFIII activation of Ras, R-Ras, and Rapl.) "J. Biol. Chem. 275: 25488-25493, 2000.
11. T. Gotoh, S. Hattori, S. Nakamura, H. Kitayama, M. Noda, Y. Takai, K. Kaibuchi, H. Matsui, 0. Hatase, H. Takahashi, T. Kurata, and M. Matsu da. 「C r k SH3 ドメインノくィンディンググァニンヌクレオチドリリーシン グフアクター、 C 3 Gの夕一ゲットとしての R a p 1の同定 (Identification o f Rapl as a target for Crk SH3 domain-binding guanine nucleotide-releasi ng factor, C3G) J Mol. Cell. Biol. 15:6746-6753, 1995. 実施例 11. T. Gotoh, S. Hattori, S. Nakamura, H. Kitayama, M. Noda, Y. Takai, K. Kaibuchi, H. Matsui, 0. Hatase, H. Takahashi, T. Kurata, and M. Matsuta da. “Identification of Rapl as a target for Crk SH3 domain-binding guanine nucleotide-release ng factor, C3G) J Mol. Cell. Biol. 15: 6746-6753, 1995.
以下、 本発明を実施例により説明するが、 本発明の範囲はかかる実施例のみに 限定されるものではない。 なお、 以下においては、 ヒト H— Ra sを Ra sと、 ヒト c一 Ra f 1を Ra f と、 ヒト R a p 1 Aを R a p 1 Aと、 ヒト Ra l GD Sを Ra l GDSと、 ヒト R— Ra sを R— Ra sという。 また、 ヒト Ra c l を Ra c lと、 ヒト C d c 42を Cd c 42と、 ヒト R h o Aを R h o Aと、 ヒ ト Pak lを P ak lと、 ヒト mD i a 1を mD i a 1という。 実施例 1 Ra f r a s l 722による Ra s活性化の測定 Hereinafter, the present invention will be described with reference to examples, but the scope of the present invention is not limited to only these examples. In the following, human H-Ras is Ras, human c-Raf1 is Raf, human Rap1A is Rap1A, human RalgDs is RalGDS, Human R-Ras is called R-Ras. Also, human Ra cl Is Racl, human Cdc42 is Cdc42, human RhoA is RhoA, human Pakl is Pakl, and human mDia1 is mDia1. Example 1 Measurement of Ras activation by Rafrasl 722
( 1) Ra sと Ra f をコードするキメラ遺伝子の作成 (1) Creation of chimeric genes encoding Ras and Raf
(i) R a s遺伝子の増幅 (i) Amplification of Ras gene
Ra sの cDNA (Genbank/EMBL了クセプシヨン番号: V00574) を铸型として、 セン スプライマ一 h R a s X h (5' -CTCGAGATGACGGAATATAAGCTGGTGGTG-3' ) (配列番 号: 1) およびアンチセンスプライマ一 Ra s 1 72Ra f (5' -AGTGTTGCTTGTC TTAGAAGGGGTACCACCTCCGGAGCCGTTCAGCTTCCGCAGCTTGTG-3' ) (配列番号: 2 ) と、 耐熱性 DNA複製酵素 P f X (Gibco-BRL Bethesda, U.S.A.) とを用い、 PC R (ポリメラ一ゼ連鎖反応) 法により R a sの 1位から 1 72位の了ミノ酸配列 に対応する c DNA部分を増幅した。 Using the cDNA of Ras (Genbank / EMBL approval number: V00574) as type III, the sense primer 1 h R as X h (5′-CTCGAGATGACGGAATATAAGCTGGTGGTG-3 ′) (SEQ ID NO: 1) and the antisense primer 1 Ra s PCR (Polymerase chain reaction) using 1 72Ra f (5'-AGTGTTGCTTGTC TTAGAAGGGGTACCACCTCCGGAGCCGTTCAGCTTCCGCAGCTTGTG-3 ') (SEQ ID NO: 2) and a thermostable DNA replication enzyme PfX (Gibco-BRL Bethesda, USA) The cDNA portion corresponding to the amino acid sequence from position 1 to position 172 of Ras was amplified by the method.
センスプライマー hRa s Xhは、 5' 末端の下線で示した制限酵素 X ho I の切断部位の塩基配列と R a sの 1位から 8位のァミノ酸配列に対応する c DN A部分の塩基配列とからなる。 一方、 アンチセンスプライマー Ra s 1 72Ra f は、 5'末端より、 Ra f の Ra s結合領域のアミノ酸配列のァミノ末端領域 ( 6 1位から 67位まで) に対応する cDN A部分の相補鎖の塩基配列、 スぺーサ 一配列 (下線部) 、 Ra sの 1 6 6位から 1 72位のアミノ酸配列に対応する c • DNA部分の相補鎖の塩基配列とからなる。 The sense primer hRas Xh has the nucleotide sequence of the cleavage site of the restriction enzyme XhoI shown underlined at the 5 'end and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence at positions 1 to 8 of Ras. Consists of On the other hand, the antisense primer Ras172Raf is complementary to the cDNA complementary to the amino-terminal region (from position 61 to position 67) of the amino acid sequence of the Ras binding region of Raf from the 5 'end. It consists of the base sequence, spacer sequence (underlined), and the base sequence of the complementary strand of c • DNA corresponding to the amino acid sequence from position 166 to position 172 of Ras.
(ii) Ra f遺伝子の増幅 (ii) Ra f gene amplification
R a f の c D N A (Genbank/EMBL了クセ' yシヨン番号: X03484) を鎳型として、 セン スプライマー Ra f RBD— F 1 (5' -GGTACCCCTTCTAAGACAAGCAACACT-3' ) (配 列番号: 3) およびアンチセンスプライマ一 Ra f RBDn 2 (5' -GCGGCCGCCCA GGAAATCTACTTGAAGTTC-3' ) (配列番号: 4 ) と前記 P f xとを用い、 P C R法に より Ra f の 5 1位から 1.3 1位のアミノ酸配列に対応する c DNA部分を増幅 した。 Using the cDNA of Raf (Genbank / EMBL case number: X03484) as type III, the sense primer Ra f RBD—F 1 (5′-GGTACCCCTTCTAAGACAAGCAACACT-3 ′) (SEQ ID NO: 3) and antisense Using the sense primer Ra f RBDn 2 (5′-GCGGCCGCCCA GGAAATCTACTTGAAGTTC-3 ′) (SEQ ID NO: 4) and the Pfx, it corresponds to the amino acid sequence of positions 51 to 1.3 of Ra f by PCR method. Amplify the cDNA portion did.
センスプライマー Ra f RBD— F lは、 5' 末端の下線で示した制限酵素 K ρ η Iの切断部位の塩基配列と R a fの 51位から 57位のアミノ酸配列に対応 する cDNA部分の塩基配列とからなる。 一方、 アンチセンスプライマ一 Ra f R B D n 2は、 5 ' 末端の下線で示した制限酵素 N o t Iの切断部位の塩基配列 と Ra fの Ra s結合領域のアミノ酸配列のカルボキシル末端領域 (125位か ら 131位まで) に対応する cDNA部分の相補鏆の塩基配列とからなる。 The sense primer Ra f RBD—Fl is the nucleotide sequence of the cleavage site of the restriction enzyme KρηI underlined at the 5 'end and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence from position 51 to position 57 of Raf. Consists of On the other hand, the antisense primer Ra f RBD n2 has the base sequence of the cleavage site of the restriction enzyme Not I and the carboxyl terminal region of the amino acid sequence of the Ras binding region of Ra f (position 125 From position 131 to position 131).
(iii) Ra sと Ra fをコードするキメラ遺伝子の増幅 (iii) Amplification of chimeric genes encoding Ras and Raf
前記 (i)および (ii)で増幅された遺伝子を混合したものを铸型として、 セ ンスプライマ一 hR a s Xhおよびアンチセンスプライマー R a f RBDn 2と 前記 P f xとを用い、 PCR法により Ra sと Ra fをコ一ドするキメラ遺伝子 からなる cDNAを増幅した。 次いで、 得られた DNA断片を pCR— b 1 un t I I-TOPO (Invitrogen社) にライゲージヨンし、 得られたプラスミ ド構 築物で大腸菌を形質転換した。 かかる大腸菌を培養後、 公知のアルカリ SDS法 によりプラスミ ドを精製した。 Using a mixture of the genes amplified in the above (i) and (ii) as a 铸 type, Ras was determined by PCR using the sense primer hR as Xh, the antisense primer Raf RBDn2 and the Pfx, and PCR. A cDNA consisting of a chimeric gene encoding Raf was amplified. Next, the obtained DNA fragment was ligated to pCR-b1unitII-TOPO (Invitrogen), and Escherichia coli was transformed with the obtained plasmid construct. After culturing such Escherichia coli, a plasmid was purified by a known alkaline SDS method.
(2) EYFPぉょびECFPを発現するべクターpFr e t 2の構築 (2) Construction of vector pFre t 2 expressing EYFP and ECFP
(i) pCAGGS - P7の構築 (i) Construction of pCAGGS-P7
pB l ue s c r i p t-SKI I (+) (Stratagene社) のマルティブルク ローニングサイトをプライマ一 p 7 (5' -CGCCAGGGTTTTCCCAGTCACGAC-3' ) (配列 番号: 5) とプライマ— P 8 (5' -AGCGGATAACAATTTCACACAGGAAAC-3' ) (配列番号 : 6) とを用い、 前記と同様にして PCR法により増幅し、 DNA断片を得た。 p7 (5'-CGCCAGGGTTTTCCCAGTCACGAC-3 ') (SEQ ID NO: 5) and primer P8 (5'-AGCGGATAACAATTTCACACAGGAAAC) were added to pB l ue scrip t-SKI I (+) (Stratagene)' s Martinburg roning site. -3 ′) (SEQ ID NO: 6) and amplified by PCR in the same manner as described above to obtain a DNA fragment.
一方、 哺乳類細胞発現べクタ一 pCAGGS (文献 7) を EcoR Iで切断し 、 K 1 e n ow酵素で平滑末端化処理した。 次いで、 前記 DNA断片と前記処理 後の pCAGGSとを T4DNAリガ一ゼで結合した。 得られたベクタ一を pC AGGS-P 7と呼ぶ。 On the other hand, pCAGGS (Reference 7), a mammalian cell expression vector, was cut with EcoRI and blunt-ended with K1enow enzyme. Next, the DNA fragment and the pCAGGS after the treatment were ligated with T4 DNA ligase. The resulting vector is called pC AGGS-P7.
(ii) EYFP遺伝子の増幅 本実施例においては、 公知の EGFP (Genbank/E BL了クセッション番号: U76561) に対し、 PCR法を用いる公知の方法により 6つのアミノ酸置換(Leu65Phe;Thr 66G1 y;Val 69Leu; Gln70Lys; Ser73Ala; Thr204Tyr) を導入したものを EYFPとし て用いた。 この EYFPの cDNAを鐯型として、 センスプライマー GFP— N 2 (5' -GGATCCGGCATGGTGAGCAAGGGCGAGGAG-3' ) (配列番号: 7) およびアンチセ ンスプライマ一 GFP— N3 (5' -GGATCCGGTACCTCGAGCTTGTACAGCTCGTCCATG-3' ) —(配列番号: 8) と前記 P f xとを用い、 PCR法により EYFPの全長アミノ 酸配列に対応する c D N Aを増幅した。 (ii) Amplification of EYFP gene In this example, six amino acid substitutions (Leu65Phe; Thr 66Gy; Val 69Leu; Gln70Lys; Gln70Lys; Ser73Ala) to a known EGFP (Genbank / EBL accession number: U76561) by a known method using PCR. Thr204Tyr) was used as EYFP. Using this EYFP cDNA as type III, the sense primers GFP—N 2 (5′-GGATCCGGCATGGTGAGCAAGGGCGAGGAG-3 ′) (SEQ ID NO: 7) and antisense primer GFP—N3 (5′-GGATCCGGTACCTCGAGCTTGTACAGCTCGTCCATG-3 ′) — (SEQ ID NO: : 8) and the above-mentioned Pfx, cDNA corresponding to the full-length amino acid sequence of EYFP was amplified by PCR.
センスプライマ一 GFP— N2は、 5' 末端の下線で示した制限酵素 B a mH Iの切断部位の塩基配列と 3塩基のスぺーサ一と EYFPの 1位から 7位のァミ ノ酸配列に対応する cDNA部分の塩基配列とからなる。 一方、 アンチセンスプ ライマ一 GFP— N3は、 5' 末端の下線で示した制限酵素 B a mH I、 K n Iおよび X h ο Iの各々の切断部位の塩基配列と後述の E C F Pのァミノ酸配列 のカルボキシル末端領塽 (233位から 23 9位まで) に対応する cDNA部分 の相補鎖の塩基配列とからなる。 Sense Primer GFP—N2 is the base sequence of the cleavage site of the restriction enzyme BamHI, underlined at the 5 'end, a 3-base spacer, and the amino acid sequence at positions 1 to 7 of EYFP. And the base sequence of the cDNA portion corresponding to On the other hand, the antisense primer GFP-N3 has the nucleotide sequence of each of the cleavage sites of the restriction enzymes BamHI, KnI and XhoI shown underlined at the 5 'end and the amino acid sequence of ECFP described below. And the base sequence of the complementary strand of the cDNA portion corresponding to the carboxyl-terminal region (from 233 to 239) of the
(iii) EC FP遺伝子の増幅 (iii) Amplification of EC FP gene
本実施例においては、 EGFP (Genbank/EMBL了クセ" /シヨン番号: U76561) に対し 、 PCR法を用いる公知の方法により 4つのアミノ酸置換 (Tyr67Trp; Asnl47Il e; Metl54Thr; Vall64Ala)を導入したものを E C F Pとして用いた。 この ECF Pの cDNAを铸型として、 センスプライマー XFPNo t 2 (5' -GCGGCCGCATG GTGAGCAAGGGCGAGGAGC -3' ) (配列番号: 9) およびアンチセンスプライマ一 X FP-Bg 1 (5' -AGATCTACAGCTCGTCCATGCCGAGAG-3' ) (配列番号: 1 0 ) と前 記 P f Xとを用い、 PCR法により ECFPの全長アミノ酸配列に対応する cD NAを増幅した。 In the present example, EGFP (Genbank / EMBL R / C / No .: U76561) into which four amino acid substitutions (Tyr67Trp; Asnl47Ile; Metl54Thr; Vall64Ala) were introduced by a known method using a PCR method was used. The cDNA of ECF P was used as type II, and the sense primer XFPNott2 (5'-GCGGCCGCATG GTGAGCAAGGGCGAGGAGC-3 ') (SEQ ID NO: 9) and antisense primer XFP-Bg1 (5'- Using AGATCTACAGCTCGTCCATGCCGAGAG-3 ′) (SEQ ID NO: 10) and the aforementioned PfX, cDNA corresponding to the full-length amino acid sequence of ECFP was amplified by PCR.
センスプライマ一 XF PNo t 2は、 5' 末端の下線で示した制限酵素 No t Iの切断部位の塩基配列と ECFPの 1位から 8位のアミノ酸配列に対応する c DNA部分の塩基配列とからなる。 一方、 アンチセンスプライマー XFP— Bg 1は、 5' 末端の下線で示した制限酵素 Bg 1 I Iの切断部位の塩基配列と EC FPのアミノ酸配列のカルボキシル末端領域 (231位から 237位まで) に対 応する c D N A部分の相補鎖の塩基配列とからなる。 The sense primer XF PNot 2 corresponds to the base sequence of the cleavage site of the restriction enzyme Not I shown underlined at the 5 'end and the amino acid sequence from position 1 to position 8 of ECFP. It consists of the base sequence of the DNA part. On the other hand, the antisense primer XFP—Bg1 binds to the base sequence of the cleavage site of the restriction enzyme Bg1II and the carboxyl terminal region (from 231 to 237) of the amino acid sequence of ECFP, which are underlined at the 5 'end. And the base sequence of the complementary strand of the corresponding cDNA portion.
(iv) p F r e t 2の構築 (iv) Construction of p F r e t 2
前記 (i)で得られた pCAGGS— P 7を制限酵素 Xho Iで切断し、 dT TPと dCTPの存在下に Kl enow酵素で処理した。 また、 前記 (ii)で得 られた EYFPの DNA断片を BamH Iで切断し、 次いで dGTPと dATP の存在下に K 1 e n ow酵素で処理した。 得られた二つの遺伝子断片を T 4 DN Aリガーゼで結合し、 プラスミ ドを得た。 該プラスミ ドを No t Iと Bg 1 I I で切断し、 次いで、 No t Iと Bg 1 I Iで予め切断しておいた前記 (iii)で 得られた ECFPの DNA断片と、 T 4 DNAリガ一ゼを用いて結合した。 得ら れたプラスミ ドを p F r e t 2と命名した。 The pCAGGS-P7 obtained in the above (i) was cleaved with the restriction enzyme XhoI, and treated with the Klenow enzyme in the presence of dTTP and dCTP. In addition, the EYFP DNA fragment obtained in (ii) above was digested with BamHI and then treated with the K1enow enzyme in the presence of dGTP and dATP. The resulting two gene fragments were ligated with T4 DNA ligase to obtain a plasmid. The plasmid was cleaved with NotI and Bg1II, and then the DNA fragment of ECFP obtained in the above (iii) which had been cleaved with NotI and Bg1II, and a T4 DNA ligase. Ligation was carried out. The obtained plasmid was named pFret2.
(3) Ra s活性モニタータンパク質遺伝子の発現プラスミ ドである pRa f r a s 1722の構築 (3) Construction of pRafras 1722, an expression plasmid for the Ras activity monitor protein gene
前記 (2) — (iv)で得られた pFr e t 2を Xho Iと No t Iで切断し、 次いで、 Xho Iと No t Iで予め切断しておいた前記 (1) 一 (iii)で得られ たキメラ遺伝子と、 T 4 DNAリガ一ゼを用いて結合した。 得られたプラスミ ド を pRa f r a s l 722と呼ぶ。 pRa f r a s l 722の構造、 その翻訳領 域の塩基配列 (配列番号: 1 1)および予測されるアミノ酸配列 (配列番号: 1 2) を第 3図と第 4図〜第 6図にそれぞれ示す。 The pFret 2 obtained in the above (2) — (iv) was cut with XhoI and NotI, and then in (1)-(iii), which was cut in advance with XhoI and NotI. The obtained chimeric gene was ligated using T4 DNA ligase. The resulting plasmid is called pRafrasl722. The structure of pRafrasl 722, the nucleotide sequence of its translation region (SEQ ID NO: 11) and the predicted amino acid sequence (SEQ ID NO: 12) are shown in FIGS. 3 and 4 to 6, respectively.
かかる塩基配列および予測されるァミノ酸配列を説明する: Illustrate such a base sequence and the predicted amino acid sequence:
nt 1 - 717 ォワンクラゲ (Aequorea)の EYFP nt 1-717 EYFP of the jellyfish (Aequorea)
nt 718 - 723 リンカー NT 718-723 linker
nt 724 - 1239 R a s nt 724-1239 R a s
nt 1240 - 125 リンカー nt 1258 - 1500: R a f nt 1240-125 linker nt 1258-1500: Raf
nt 1501 - 1509: リンカ一 nt 1501-1509: the linker
nt 1510 - 2220:ォワンクラゲの ECFP nt 1510-2220: Owan jellyfish ECFP
(4)哺乳類細胞での R a s活性モニタ一タンパク質 (Ra f r a s l 722) の発現と分光光度法による解析 (4) Expression of Ras activity monitor protein (Rafrasl722) in mammalian cells and analysis by spectrophotometry
ヒト胎児腎臓由来 HEK 293 T細胞は 1 0%ゥシ胎仔血清を含む D MEM培 地 (日本製薬社製) で培養した。 該 HEK 293 T細胞に前記 (3) で得られた pRa f r a s l 722とグァニンヌクレオチド交換因子 S o s発現べクタ一 ( pCAGGS-mSo s) または G TP水解促進酵素 G a p lm発現べクタ一 ( pEF— Bo s— Gap lm) をリン酸カルシウム法にてトランスフエクトした 。 トランスフヱクト後の HEK 293 T細胞を 10 %ゥシ胎仔血清を含む DM E M培地 (日水製薬社製) で培養し、 Ra s活性モニタータンパク質を発現させた 。 48時間培養後に、 細胞をリン酸緩衝生理食塩水にて洗浄し、 溶解液 (20 mM Tris-HCl, pH 7.5, 150 mM NaCL 5 mM MgCh, 0.1% Triton X- 100) にて溶解し た。 得られた細胞溶解液を 1 0, 000 xgで遠心分離後、 上清を回収した。 該上清を蛍光分光光度計 (日本分光社製、 FP-750) の 1 m 1キュべットに入れ 、 励起波長 433 nmにて、 450 nmから 550 nmまでの蛍光強度を測定し た。 得られた蛍光プロフィールを第 7図に示す。 HEK 293 T cells derived from human fetal kidney were cultured in DMEM medium (manufactured by Nippon Pharmaceutical Co., Ltd.) containing 10% fetal serum. In the HEK 293 T cells, the pRafrasl 722 obtained in the above (3) and the guanine nucleotide exchange factor Sos expression vector (pCAGGS-mSos) or the GTP water degradation promoting enzyme Gap lm expression vector (pEF — Bo s — Gap lm) was transfected by the calcium phosphate method. The HEK293 T cells after the transfection were cultured in a DMEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum to express the Ras activity monitor protein. After culturing for 48 hours, the cells were washed with phosphate buffered saline and lysed with a lysis solution (20 mM Tris-HCl, pH 7.5, 150 mM NaCL 5 mM MgCh, 0.1% Triton X-100). The obtained cell lysate was centrifuged at 10,000 xg, and the supernatant was recovered. The supernatant was placed in a 1 ml cuvette of a fluorescence spectrophotometer (FP-750, manufactured by JASCO Corporation), and the fluorescence intensity from 450 nm to 550 nm was measured at an excitation wavelength of 433 nm. The obtained fluorescence profile is shown in FIG.
なお、 前記トランスフヱクト後の HEK 293 T細胞を32 P i無機リン酸で標 識した後に該細胞の溶解液を得、 抗 GFP抗体を用い、 発現させた Ra s活性モ 二タータンパク質を免疫沈降し、 結合している GTPおよび GDPを薄層クロマ トグラフィ一にて分離することにより、 Ra s活性モニタ一夕ンパク質について 得られた蛍光プロフィールのデータから得られる FRET効率 〔波長 433 nm で励起したときの、 (波長 530 nmにおける蛍光強度) を (波長 475 nmに おける蛍光強度) で割った値〕 と実際の GTP結合の程度とを対応付けることが 可能である (第 8図) 。 なお、 第 8図中、 FRET効率は 「蛍光強度比 (波長 5 30/475 ) 」 と、 GTP結合の程度は rGTP/7 (GDP + GTP) (%) J として示した。 After transfected HEK 293 T cells were labeled with 32 Pi inorganic phosphate, a lysate of the cells was obtained, and the expressed Ras-active monitor protein was immunized with an anti-GFP antibody. Separation of sedimented and bound GTP and GDP by thin-layer chromatography, FRET efficiency obtained from the fluorescence profile data obtained for the Ras activity monitor protein (excitation at 433 nm wavelength). Then, the value obtained by dividing (the fluorescence intensity at a wavelength of 530 nm) by (the fluorescence intensity at a wavelength of 475 nm) can be associated with the actual degree of GTP binding (Fig. 8). In FIG. 8, the FRET efficiency is expressed as “fluorescence intensity ratio (wavelength 5 30/475) ”and the degree of GTP binding was expressed as rGTP / 7 (GDP + GTP) (%) J.
(5) 哺乳類細胞での R a s活性モニタータンパク質の発現とタイムラブス蛍光 顕微鏡による解析 (5) Expression of Ras activity monitor protein in mammalian cells and analysis by Timelabs fluorescence microscopy
サル腎臓由来 COS 7細胞は 1 0%ゥシ胎仔血清を含むフユノールレツド不含 MEM培地 (日本製薬社製) で培養した。 該 COS 7細胞に前記(3) で得られ た pRa f r a s 1 722をリン酸カルシウム法にてトランスフエクトした。 ト ランスフヱクト後の COS 7細胞を 1 0%ゥシ胎仔血清を含むフヱノールレツド 不含 MEM培地 (日水製薬社製) で培養し、 Ra s活性モニタータンパク質を発 現させた。 トランスフエクシヨンの 48時間後に、 培養細胞をタイムラブス蛍光 顕微鏡による観察に供した。 Monkey kidney-derived COS 7 cells were cultured in a FUNOLED Red-free MEM medium (manufactured by Nippon Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum. PRafras1722 obtained in the above (3) was transfected into the COS 7 cells by the calcium phosphate method. The transfected COS 7 cells were cultured in a phenol-free MEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum to express the Ras activity monitor protein. Forty-eight hours after transfection, the cultured cells were subjected to observation with a Timelabs fluorescence microscope.
かかる顕微鏡は、 回転式蛍光励起フィルター装置および回転式蛍光発光フィル ター装置 (LUDL electronic社製) を備え、 さらに高感度冷却 C C Dカメラ (Ph otometrix社製、 Micromax450 ) を備えた、 キセノン光源を有する倒立型蛍光顕 微鏡 (Carl Zeiss社製、 Axiovert 100) であり、 観察の際は、 該顕微鏡の制御な らびに観察結果の解析を日本ローパー社製メタモルフ (Metamorph ) 画像解析ソ フトにより行うシステムを用いた。 蛍光励起フィルター、 蛍光発光フィルター、 ダイクロイツクミラーはオメガ社より購入した。 Such a microscope is equipped with a rotary fluorescence excitation filter device and a rotary fluorescence emission filter device (manufactured by LUDL electronic) and an inverted xenon light source equipped with a high-sensitivity cooled CCD camera (Photometrix, Micromax450). Type fluorescence microscope (Carl Zeiss, Axiovert 100). When observing, a system that controls the microscope and analyzes the observation results using Metamorph image analysis software manufactured by Nippon Roper Co., Ltd. Using. The fluorescence excitation filter, fluorescence emission filter, and dichroic mirror were purchased from Omega.
前記培養細胞に 433 nmの励起光を照射し、 475 nmの ECFPドナ一の 蛍光波長での画像を CCDカメラにより撮影し、 次いで、 530 nmの EYFP ァクセプターの蛍光波長での画像を撮影した。 両画像データをもとに両者の蛍光 強度の比を求めることにより各測定点での F R E T効率を計算した。 実施例 2 R a s活性を簡便に測定するための培養細胞株の取得 The cultured cells were irradiated with excitation light of 433 nm, an image of the fluorescence wavelength of the ECFP donor of 475 nm was taken with a CCD camera, and then an image of the fluorescence wavelength of the EYFP receptor of 530 nm was taken. The FRET efficiency at each measurement point was calculated by calculating the ratio of the fluorescence intensities of the two based on the image data. Example 2 Acquisition of Cultured Cell Line for Easy Measurement of Ras Activity
マウス線維芽細胞 N I H3T 3細胞は 10 %ゥシ胎仔血清を含む DMEM培地 (日水製薬社製) で培養した。 かかる N I H 3 T 3細胞に、 実施例 1で得られた pR f r a s l 722と G4 1 8耐性遺伝子を含むベクタ一 p S V 2 n e o ( Genbank/EMBL: U02434) とを、 FuGe n e 6 (日本ロッシュ社製) を用いて共 ドランスフェクトした。 該細胞を前記培地にて培養し、 4 8時間培養後に 1 : 1 0の希釈率で捲きなおし、 G4 1 8 (Gibco — BRL社製) を 0. 5mgZm lに なるように培地中に添加した。 培地は 3日に一度交換した。 培養 2週間後、 よく 分離したコロニーをクローニングし、 3T3 _Ra f r a s細胞と命名した。 かかる 3 T 3— R a f r a s細胞を 1 0%ゥシ胎仔血清と 0. 5mg/m 1の G4 1 8とを含む DMEM培地 (日水製薬社製) で培養し、 R a s活性モニタ一 タンパク質を発現させた。 次いで、 かかるタンパク質の発現を抗 R a s抗体 (Tr ansduction Lab社) を用いた通常のィムノブロッテイング法にて解析した。 そ の結果、 約 8.0 kD aのタンパク質の発現が認められた (第 9図) 。 Mouse fibroblast NI H3T3 cells were cultured in DMEM medium (manufactured by Nissui Pharmaceutical) containing 10% fetal calf serum. The NIH 3 T3 cells obtained in Example 1 pRfrasl722 and vector pSV2neo (Genbank / EMBL: U02434) containing the G4 18 resistance gene were co-transfected using FuGene 6 (Nippon Roche). The cells were cultured in the above-mentioned medium, and after culturing for 48 hours, re-wound at a dilution ratio of 1:10, and G4 18 (Gibco — manufactured by BRL) was added to the medium to a concentration of 0.5 mgZml. . The medium was changed once every three days. After 2 weeks of culture, well separated colonies were cloned and named 3T3_Rafras cells. The 3T3-Rafras cells are cultured in a DMEM medium (manufactured by Nissui Pharmaceutical Co., Ltd.) containing 10% fetal bovine serum and 0.5 mg / m1 of G418, and the Ras activity monitor protein is analyzed. Was expressed. Next, the expression of such a protein was analyzed by the usual immunoblotting method using an anti-Ras antibody (Transduction Lab). As a result, expression of a protein of about 8.0 kDa was observed (Fig. 9).
さらに、 かかる細胞を上皮細胞増殖因子 (EGF) (S i gma社製) で刺激 し、 実施例 1の (4) に記載め方法により FRET効率を求め、 EGF刺激前後 で比較した。 EGF添加前後における蛍光プロフィールを第 1 0図に示す。 実施例 3 Ra i _c hu 3 1 1による Rap l A活性化の測定 Further, the cells were stimulated with epidermal growth factor (EGF) (Sigma), and the FRET efficiency was determined by the method described in (4) of Example 1 and compared before and after the EGF stimulation. FIG. 10 shows the fluorescence profiles before and after the addition of EGF. Example 3 Measurement of Rap A activation by Ra i _c hu 3 11
( 1 ) Rap 1 Aと R a 1 GD Sをコードするキメラ遺伝子の作成 (1) Creation of chimeric genes encoding Rap 1 A and Ra 1 GDS
( i ) Rap l A遺伝子の増幅 (i) Rap A gene amplification
R a p 1 Aの c DNA (Genbank/EMBL了クセッション番号: X12533) を铸型として、 センスプライマ一 hRap l Xh (5' -GGCTCGAGATGCGTGAGTACAAGCTAGTGG-3' ) ( 配列番号: 1 3) およびアンチセンスプライマ一 Ra p 1 72Ra 1 GDS (5' -GCGGATGATACAGCAGTCGCCACCTCCGGATCCGCCGGTACCTCCACCACCGGTTCCACCTCCGGAGCCAT TGATCTTTGACTTTGCAGAAG-3' ) (配列番号 : 1 4) と、 前記 P f xとを用い、 PC R法により Rap 1 Aの 1位から 1 72位のアミノ酸配列に対応する c DNA部 分を増幅した。 Using the cDNA of R ap 1 A (Genbank / EMBL end accession number: X12533) as type III, sense primer hRapl Xh (5′-GGCTCGAGATGCGTGAGTACAAGCTAGTGG-3 ′) (SEQ ID NO: 13) and antisense primer Ra p 1 72Ra 1 GDS (5′-GCGGATGATACAGCAGTCGCCACCTCCGGATCCGCCGGTACCTCCACCACCGGTTCCACCTCCGGAGCCAT TGATCTTTGACTTTGCAGAAG-3 ′) (SEQ ID NO: 14) The corresponding cDNA portion was amplified.
センスプライマ一 hRap 1 Xhは、 5, 末端の下線で示した制限酵素 Xh 0 Iの切断部位の塩基配列と R a p 1 Aの 1位から 8位のァミノ酸配列に対応する cDNA部分の塩基配列とからなる。 一方、 アンチセンスプライマー Ra p 1 7 2Ra l GDSは、 5' 末端より、 Ra l GDS (Genbank/EMBL了クセッション番号: U14417) の R a p 1 A結合領域のァミノ酸配列のァミノ末端領域( 21 1位から 21 7位まで) に対応する cDNA部分の相補鎖の塩基配列、 スぺ一サ一配列 ( 下線部) 、 Rap 1 Aの 1 66位から 1 72位のアミノ酸配列に対応する c DN A部分の相補鎖の塩基配列とからなる。 The sense primer hRap 1 Xh is the restriction enzyme Xh 0 It consists of the nucleotide sequence of the cleavage site of I and the nucleotide sequence of the cDNA portion corresponding to the amino acid sequence at positions 1 to 8 of Rap1A. On the other hand, the antisense primer Rap172Ra1GDS is composed of the amino terminal region (21) of the amino acid sequence of the Rap1A binding region of Ra1GDS (Genbank / EMBL accession number: U14417) from the 5 'end. The nucleotide sequence of the complementary strand of the cDNA portion corresponding to positions 1 to 217), the spacer sequence (underlined), and the cDN corresponding to the amino acid sequence of positions 166 to 172 of Rap 1A It consists of the base sequence of the complementary strand of the A portion.
(ii) Ra 1 GDS遺伝子の増幅 (ii) Ra 1 GDS gene amplification
Ra 1 GDSの cDNA (Genbank/EMBL了クセッション番号: U14417) を铸型として 、 センスプライマー Ra l GDS— F (5' -GGCGACTGCTGTATCATCCGC- 3' ) (配列 番号: 15) およびアンチセンスプライマー R a 1 GDSR (5' -CGCGGCCGCCCCG CTTCTTGAGGACAAAGTC-3' ) (配列番号: 1 6) と前記 P f xとを用い、 PCR法 により Ra 1 GDSの cDNAを増幅した。 Using the Ra 1 GDS cDNA (Genbank / EMBL endion number: U14417) as type III, the sense primer Ra l GDS—F (5′-GGCGACTGCTGTATCATCCGC-3 ′) (SEQ ID NO: 15) and the antisense primer Ra 1 Ra1 GDS cDNA was amplified by PCR using GDSR (5'-CGCGGCCGCCCCG CTTCTTGAGGACAAAGTC-3 ') (SEQ ID NO: 16) and the Pfx.
センスプライマ一 R a 1 GDS— Fは、 Ra 1 GDSのcDNAのRap 1 A 結合領域のアミノ酸配列のァミノ末端領域 (21 1位から 21 7位まで) に対応 する cDNA部分の塩基配列を有する。 一方、 アンチセンスプライマ一 Ra 1 G D S Rは、 5 ' 末端の下線で示した制限酵素 N 0 ΐ Iの切断部位の塩基配列と R a 1 GDSの Rap 1 A結合領域のアミノ酸配列のカルボキシル末端領域 (29 1位から 297位まで) に対応する cDNA部分の塩基配列の相補鎖の塩基配列 とからなる。 The sense primer Ra1GDS-F has the nucleotide sequence of the cDNA portion corresponding to the amino terminal region (from position 211 to position 217) of the amino acid sequence of the Rap1A binding region of the cDNA of Ra1GDS. On the other hand, the antisense primer Ra 1 GDSR is composed of the base sequence of the cleavage site of the restriction enzyme N 0 ΐI underlined at the 5 ′ end and the carboxyl terminal region of the amino acid sequence of the Rap 1 A binding region of Ra 1 GDS ( 291 from position 1 to position 297), and the complementary nucleotide sequence of the nucleotide sequence of the cDNA portion.
(iii) Rap 1 Aと Ra 1 GD Sをコードするキメラ遺伝子の増幅 (iii) Amplification of chimeric genes encoding Rap 1 A and Ra 1 GDS
前記 (i) および (ii) で増幅された遺伝子を混合したものを铸型として、 セ ンスプライマ一 hRap 1 Xhおよびアンチセンスプライマ一 R a 1 GDSRと Pf Xとを用い、 PCR法により Rap 1Aと Ra 1 GD Sをコードするキメラ 遺伝子からなる cDNAを増幅した。 次いで、 得られた DNA断片を pCR— b 1 un t I I一 TOPOにライゲ一シヨンし、 得られたプラスミ ド構築物で大腸 菌を形質転換した。 かかる大腸菌を培養後、 公知のアルカリ SDS法によりブラ スミ ドを精製した。 Using the mixture of the genes amplified in the above (i) and (ii) as type I, Rap 1A was synthesized by PCR using sense primer hRap1Xh and antisense primer Ra1GDSR and PfX. A cDNA consisting of a chimeric gene encoding Ra1GDS was amplified. Next, the obtained DNA fragment was ligated to pCR-b1untII-TOPO, and the resulting plasmid construct was used to colonize the large intestine. The bacteria were transformed. After culturing such Escherichia coli, a plasmid was purified by a known alkaline SDS method.
(2) Rap 1 A活性モニタータンパク質遺伝子め発現プラスミ ドである pR a i -chu 3 1 1の構築 (2) Construction of pR ai-chu 311 which is an expression plasmid for Rap 1 A activity monitor protein gene
実施例 1の (2) の (ii) において、 アンチセンスプライマー GFP— N3に 換えてアンチセンスプライマー GFP— d 1 1 R (5' -GGATCCGGTACCTCGAGGGCGGC GGTCACGAACTCCAGCAG-3' ) (配列番号 : 1 7) を用い同様の操作を行い、 ECF Pと、 そのアミノ酸配列のカルボキシル末端のアミノ酸が 1 1個欠損した EYF Pとをコードする cDNAを含むベクタ一を作成した。 かかるベクタ一を Xho Iと No t Iで切断した。 次いで、 該ベクターと、 Xho Iと No t Iで予め切 断しておいた前記 (1) で得られたキメラ遺伝子とを T 4 DNAリガ一ゼで結合 した。 得られたプラスミ ドを pR a i - c hu 31 1と命名した。 得られたブラ スミ ドの構造ならびに、 その翻訳領域の塩基配列 (配列番号: 1 8) および予測 されるアミノ酸配列 (配列番号: 1 9) を第 1 1図と第 1 2図〜第 14図にそれ ぞれ示す。 In (ii) of (2) of Example 1, antisense primer GFP-d11R (5'-GGATCCGGTACCTCGAGGGCGGCGGTCACGAACTCCAGCAG-3 ') (SEQ ID NO: 17) was used instead of antisense primer GFP-N3. A similar operation was performed to prepare a vector containing cDNA encoding ECFP and EYFP which lacks 11 amino acids at the carboxyl terminus of the amino acid sequence. This vector was cut with XhoI and NotI. Next, the vector and the chimeric gene obtained in the above (1), which had been cut with XhoI and NotI, were ligated with T4 DNA ligase. The resulting plasmid was named pR ai -c hu 311. The structure of the obtained plasmid, the nucleotide sequence of its translated region (SEQ ID NO: 18) and the predicted amino acid sequence (SEQ ID NO: 19) are shown in FIGS. 11 and 12 to 14. Are shown below.
かかる塩基配列および予測されるアミノ酸配列を説明する : Illustrating such a base sequence and the predicted amino acid sequence:
nt 1 - 684 :ォワンクラゲの EYFP nt 1-684: EYFP of the Jellyfish
nt 685 - 690 : リンカ一 nt 685-690: the linker
nt 691 - 1206 : Rap 1 A nt 691-1206: Rap 1 A
nt 1207一 1257: リンカ一 nt 1207-1257: linker
nt 1258 - 1515: Ra 1 GDS nt 1258-1515: Ra 1 GDS
nt 1516 - 1521: リンカ一 nt 1516-1521: The linker
nt 1522 - 2235:ォワンクラゲの ECFP nt 1522-2235: Owan jellyfish ECFP
(3)哺乳類細胞での Rap 1 A活性モニタータンパク質 (Ra i— chu 3 1 1) の発現と分光光度法による解析 (3) Expression of Rap 1 A activity monitor protein (Ra i-chu 3 11) in mammalian cells and analysis by spectrophotometry
実施例 1の (4) に記載の方法により解析を行った。 得られた蛍光ブロフィー ルを第 1 5図に示す。 実施例 4 Ra i -chu 1 58による R— Ra s活性化の測定 The analysis was performed by the method described in (4) of Example 1. Obtained fluorescent brophy This is shown in Figure 15. Example 4 Measurement of R—Ras activation by Ra i-chu 158
(1) pRa i -chu 1 58の構築 (1) Construction of pRa i -chu 1 58
(i) R— Ra s遺伝子の増幅 (i) R—Ras gene amplification
R— R a sの c DNA (Genbank/EMBL了クセッシヨン番号: M14948, 14949) を鐯型 として、 センスプライマ一 RRa s 28F (5' -CCCCTCGAGACACACAAGCTGGTGGTC-3 ' ) (配列番号: 20) およびアンチセンスプライマー RRa s 204 R (5'- G CCGGTACCGCCACTGGGAGGGCTCGGTGGGAG-3' ) (配列番号: 21 ) と、 前記 P f xと を用い、 PCR法により R— Ra sの 28位から 204位のアミノ酸配列に対応 する c DNA部分を増幅した。 R—Ras cDNA (Genbank / EMBL accession number: M14948, 14949) was used as type III, and the sense primer RRas 28F (5′-CCCCTCGAGACACACAAGCTGGTGGTC-3 ′) (SEQ ID NO: 20) and antisense primer RRa Using s204R (5'-G CCGGTACCGCCACTGGGAGGGCTCGGTGGGAG-3 ') (SEQ ID NO: 21) and Pfx, a cDNA portion corresponding to the amino acid sequence from position 28 to position 204 of R-Ras by PCR method Was amplified.
センスプライマー RRa s 28Fは、 5' 末端の下線で示した制限酵素 X h o Iの切断部位の塩基配列と R— R a sの 28位から 33位のアミノ酸配列に対応 する cDNA部分の塩基配列とからなる。 一方、 アンチセンスプライマ一 RRa s 204 R.は、 5' 末端より、 Kpn I切断部位を含むスぺーサー配列 (下線部 )、 R-Ra sの 1 98位から 204位のアミノ酸配列に対応する c DNA部分 の相補鎖の塩基配列とからなる。 The sense primer RRas28F is derived from the nucleotide sequence of the cleavage site of the restriction enzyme XhoI shown underlined at the 5 'end and the nucleotide sequence of the cDNA corresponding to the amino acid sequence from position 28 to position 33 of R-Ras. Become. On the other hand, the antisense primer RRas 204 R. corresponds to the spacer sequence containing the KpnI cleavage site (underlined) from the 5 'end, and the amino acid sequence from position 198 to position 204 of R-Ras. It consists of the base sequence of the complementary strand of the cDNA portion.
(ii)制限酵素断片の作製 (ii) Preparation of restriction enzyme fragment
前記 (i)で得られた PCR産物を Xho Iと Kpn Iとで切断した。 The PCR product obtained in the above (i) was cut with XhoI and KpnI.
(iii) R— Ra s活性モニタ一タンパク質遺伝子の発現プラスミ ドである p Ra i - c hu 1 58の構築 (iii) Construction of pRa i-chu 158, an expression plasmid for the R—Ras activity monitor protein gene
実施例 1で得られた PR a f r a s 1 722を Xho Iで完全消化したのち、 Kpn. Iで部分消化し、 R a s部分を除去した DNA断片を得た。 該 DNA断片 と前記 (ii)で得られた DNA断片とを T 4 DNAリガ一ゼで結合した。 得られ たプラスミ ドを pRa i -chu 1 58と命名した。 該プラスミ ドの構造ならび に、 その翻訳領域における塩基配列 (配列番号: 22) および予測されるァミノ 酸配列 (配列番号: 23) を第 1 6図と第 1 7図〜第 1 9図にそれぞれ示す。 かかる塩基配列および予測されるアミノ酸配列を説明する : PR afras 1 722 obtained in Example 1 was completely digested with XhoI and then partially digested with Kpn. I to obtain a DNA fragment from which the Ras portion had been removed. The DNA fragment and the DNA fragment obtained in (ii) were ligated with T4 DNA ligase. The resulting plasmid was named pRa i-chu 158. The structure of the plasmid, the nucleotide sequence in its translation region (SEQ ID NO: 22) and the predicted amino acid The acid sequence (SEQ ID NO: 23) is shown in FIG. 16 and FIGS. 17 to 19, respectively. Illustrating such a base sequence and the predicted amino acid sequence:
nt 1 - 717 :ォワンクラゲの EYFP nt 1-717: EYFP of the Jellyfish
nt 718一 723 : リンカー NT 718 – 723: Linker
nt 724 - 1251 : R-R a s nt 724-1251: R-R a s
nt 1252 - 1257: リンカ一 nt 1252-1257: the linker
nt 1258 - 1500: R a f nt 1258-1500: R a f
nt 1501 一 1509: リンカ一 nt 1501 one 1509: linker one
nt 1510 - 2220:ォワンクラゲの ECFP nt 1510-2220: Owan jellyfish ECFP
(2) 哺乳類細胞での R— R a s活性モニタ一タンパク質 (Ra i— c hu 1 5 8) の発現と分光光度法による解析 (2) Expression of R-Ras activity monitor protein (Ra i- chu158) in mammalian cells and analysis by spectrophotometry
実施例 1の (4) に記載の方法により解析を行った。 得られた蛍光ブロフィー ルを第 20図に示す。 実施例 5 Ra sの標的タンパク質結合ドメインに温度感受性変異を有するモニ 夕一タンパク質をコードする遺伝子の構築 The analysis was performed by the method described in (4) of Example 1. Fig. 20 shows the obtained fluorescent profiles. Example 5 Construction of Gene Encoding Moni Yuichi Protein Having Temperature-Sensitive Mutation in Ras Target Protein Binding Domain
(1) pRa i -chu 1 1 9の構築 (1) Construction of pRa i -chu 1 1 9
( i ) 変異を有する R a s遺伝子の増幅 (i) Amplification of mutated Ras gene
実施例 1にて用いた R a sの c DNAを铸型として、 センスプライマー hR a sXh (実施例 1にて使用) とアンチセンスプライマ一 Ra s I 36 LR (5' -G GAATCCTCTAGAGTGGGGTCG-3') (配列番号: 24) と前記 P f xとを用い、 PCR 法により Ra sの 1位から 39位のアミノ酸配列に対応する c DNA部分を増幅 した。 Using the Ras cDNA used in Example 1 as type III, sense primer hRasXh (used in Example 1) and antisense primer RasI36LR (5'-G GAATCCTCTAGAGTGGGGTCG-3 ') Using (SEQ ID NO: 24) and the above Pfx, a cDNA portion corresponding to the amino acid sequence from position 1 to position 39 of Ras was amplified by PCR.
アンチセンスプライマ一 R a S I 36LRは、 Ra sの 35位から 42位の了 ミノ酸配列に対応する cDNA部分の配列を有し、 下線で示した部分に I 1 eの L e uへの点突然変異を有している。 この変異は R a sの活性を温度感受性にす ることが知られている (文献 8)。 The antisense primer RaSI36LR has the sequence of the cDNA portion corresponding to the amino acid sequence from position 35 to position 42 of Ras, and the underlined portion indicates that the I 1 e It has a mutation. This mutation makes Ras activity temperature sensitive. Is known (Ref. 8).
同様に、 Ra sの c DNAを鐯型として、 センスプライマ一 R a s I 36 LF (5' -CGACCCCACTCTAGAGGATTCC-3' ) (配列番号: 25) とアンチセンスプライマ -Ra s 172Ra f (実施例 1にて使用) と前記 P f xとを用い、 PCR法に より Ra sのアミノ酸配列の 32位から 172位に対応する c DNA部分を増幅 し 7こ o Similarly, using the Ras cDNA as type II, the sense primer RasI36LF (5'-CGACCCCACTCTAGAGGATTCC-3 ') (SEQ ID NO: 25) and the antisense primer -Ras172Raf (see Example 1) And the above-mentioned P fx, and amplify the cDNA portion corresponding to positions 32 to 172 of the amino acid sequence of Ras by PCR using PCR
得られた 2つの DNA断片を混合し、 センスプライマー hRa sXhとアンチ センスプライマー R a s 172Ra f とを用い、 前記と同様にして P C Rを行い 、 Ra sのアミノ酸配列の 1位から 172位に対応し、 かつ I 1 e 36の Leu への点突然変異を含む DNAを増幅した。 The obtained two DNA fragments were mixed, and PCR was carried out using the sense primer hRasXh and the antisense primer Ras172Raf in the same manner as described above, corresponding to positions 1 to 172 of the amino acid sequence of Ras. And a DNA containing a point mutation of I1e36 to Leu was amplified.
(ii)制限酵素断片の作製 (ii) Preparation of restriction enzyme fragment
上記 PC R産物を X ho Iと Kpn Iとで切断した。 The PCR product was cut with XhoI and KpnI.
(iii)実施例 1で得られた pR a f r a s l 722を Xho Iで完全消化し たのち、 Kpn Iで部分消化し、 Ra sの部分を除去した DNA断片を得た。 該 DNA断片と前記 (ii)で得られた DNA断片とを T 4 DNAリガ一ゼで結合し た。 得られたプラスミ ドを p Ra i -chu 1 1 9と命名した。 該プラスミ ドの 翻訳領域における塩基配列 (配列番号: 26)および予測されるアミノ酸配列 ( 配列番号 ·· 27 ) を第 21図〜第 23図にそれぞれ示す。 (iii) pRafrasl722 obtained in Example 1 was completely digested with XhoI and then partially digested with KpnI to obtain a DNA fragment from which Ras was removed. The DNA fragment and the DNA fragment obtained in (ii) were ligated with T4 DNA ligase. The resulting plasmid was named pRai-chu119. The nucleotide sequence (SEQ ID NO: 26) and the predicted amino acid sequence (SEQ ID NO: 27) in the translation region of the plasmid are shown in FIGS. 21 to 23, respectively.
(2)哺乳類細胞でのモニタータンパク質 (Ra i— c hu 1 19) の発現と分 光光度法による解析 (2) Expression of monitor protein (Ra i- c hu 119) in mammalian cells and analysis by spectrophotometry
ヒト胎児腎臓由来 HEK 293 T細胞を 10 %ゥシ胎仔血清を含む D MEM培 地 (曰水製薬社製) で培養した。 該 HEK 293 T細胞に、 実施例 1において作 成した pRa f r a s 1722または pRa i— c h u 1 19と、 グァニンヌク レオチド交換因子 So s発現ベクター (pCAGGS_mSo s) とをリン酸力 ルシゥム法にてトランスフヱクトした。 前記同培地にて 24時間培養後に 33°C および 40°Cのインキュベータに移し、 さらに 24時間、 培養した。 該細胞をリ ン酸緩衝生理食塩水にて洗浄した後、 溶解液 (20 mM Tris-HCl, pH 7.5, 150mM NaCL 5 mM MgCh, 0.1¾ Triton X-100 ) にて溶解した。 得られた細胞溶解液をHEK293 T cells derived from human fetal kidney were cultured in a DMEM medium (manufactured by Mizu Seiyaku) containing 10% fetal serum. The HEK 293 T cells were transfected with the pRafras 1722 or pRa i-chu 119 prepared in Example 1 and a guanine nucleotide exchange factor Sos expression vector (pCAGGS_mSos) by a phosphoric acid lupus method. did. After culturing for 24 hours in the same medium, the cells were transferred to an incubator at 33 ° C and 40 ° C, and further cultured for 24 hours. Remove the cells After washing with a phosphate buffered saline, the cells were dissolved in a lysis solution (20 mM Tris-HCl, pH 7.5, 150 mM NaCL 5 mM MgCh, 0.1¾ Triton X-100). The cell lysate obtained is
1 0, 0 00 xgで遠心分離し上清を回収した。 The supernatant was collected by centrifugation at 100,000 xg.
該上清を蛍光分光光度計 (日本分光社製、 FP- 750) の 1 m 1キュべットに入れ 、 励起波長 4 33 nmにて、 45 0 nmから 550 nmまでの蛍光強度を測定し た。 得られた蛍光プロフィールを第 24図に示す。 実施例 6 Ra f r a s 1 722を発現するトランスジヱニックマウスの作成お よびこのマウスの心筋培養細胞における R a s活性化の測定 The supernatant was placed in a 1 ml cuvette of a fluorescence spectrophotometer (FP-750, manufactured by JASCO Corporation), and the fluorescence intensity from 450 nm to 550 nm was measured at an excitation wavelength of 433 nm. Was. The resulting fluorescence profile is shown in FIG. Example 6 Generation of transgenic mouse expressing Rafras1722 and measurement of Ras activation in cultured cardiomyocytes of this mouse
( 1) 実施例 1で得られた pR a f r a s 1 722を制限酵素 Sp e Iおよび B amH Iで切断し、 これをァガロース電気泳動にかけ、 約 4. 5 kbのプロモー ター、 イントロン、 コーディング配列、 ポリ A付加シグナルを含む領域の DN A 断片を得た。 該 DNAは電気溶出法にてゲルより取り出した後、 Qiagen20チップ (1) pRafras 1722 obtained in Example 1 was digested with restriction enzymes SpE I and BamHI, subjected to agarose gel electrophoresis, and a promoter, an intron, a coding sequence, a polysequence of about 4.5 kb was obtained. A DNA fragment of the region containing the A addition signal was obtained. After removing the DNA from the gel by electroelution, use a Qiagen20 chip
(キアゲン社) を用いて精製した。 この DNAを定法に従い、 マウス受精卵 (DB Fl、 日本エスエルシー社) の前核に注入し、 偽妊娠させた I CRマウス (日本ェ スエルシー社) の卵管内に移植した。 得られたマウスの離乳後、 尾を 1 cm切断 し、 プ πティナ一ゼ Kを含む DNA抽出液 (ABI 社) 中で 37°Cにて一晩維持し 、 ここから、 フヱノールおよびフエノールクロ口ホルムにてタンパク質を除いた 後に、 等量のイソプロパノールを加えて、 析出した DNAを回収した。 回収した DNAを水にいれ、 37°Cで溶解させた。 (Qiagen). This DNA was injected into the pronucleus of a mouse fertilized egg (DB Fl, Japan SLC) according to a standard method, and transplanted into the oviduct of a pseudopregnant ICR mouse (Japan SLC). After weaning of the obtained mouse, the tail was cut 1 cm, and kept overnight at 37 ° C. in a DNA extract containing P-tinase K (ABI). From here, phenol and phenol After removing the protein with form, an equal volume of isopropanol was added to recover the precipitated DNA. The recovered DNA was put in water and dissolved at 37 ° C.
(2) このマウス DNAを鐯型にして、 センスプライマ一 Ra f RBDx (5' -C TCGAGCCTTCTAAGACAAGCAACACT-3' ) (配列番号: 28) とアンチセンスプライマ -XFPNs e q (5' -CGTCGCCGTCCAGCTCGACCAG-3' ) (配列番号 : 29) とを用 い、 PCR法にて DNAを増幅した。 このプライマ一により、 Ra f r a s 1 7 22遺伝子のうちの R a f遺伝子と EC FP遺伝子の連結領域に相当する DNA が増幅できる。 予期される 3 1 4 b pのバンドが現れるものを、 Ra f r a s 1 722の DNAの組み込みがあると判定した。 35匹の仔マウスのうち 7匹にこ のバンドが確認できた。 (2) Using this mouse DNA as type II, the sense primer Ra f RBDx (5'-C TCGAGCCTTCTAAGACAAGCAACACT-3 ') (SEQ ID NO: 28) and the antisense primer -XFPNs eq (5'-CGTCGCCGTCCAGCTCGACCAG-3') (SEQ ID NO: 29) and the DNA was amplified by PCR. With this primer, DNA corresponding to the connection region between the Raf gene and the ECFP gene in the Rafras1722 gene can be amplified. Ra fras 1 It was determined that 722 DNA had been integrated. This band was confirmed in 7 out of 35 pups.
(3) つぎに、 この F 1マウスを C57/B l a ckマウス (日本エスエルシ一 社) と交配させた。 F 2のマウス新生児 (0日齢) より、 心室をとり、 眼科用ハ サミで細切した。 ここに、 0. 05%トリプシンと 0. 5mM EDTAとを含 む PBSを加え、 37°Cで細胞を 1 0分間処理し、 剝離してきた心筋細胞を回収 した。 この操作を 6回繰り返し、 心筋細胞を集めた。 ここに、 10%ゥシ胎仔血 清を含む DMEM培地を加え、 低速遠心にて心筋細胞を沈殿させ、 上清を捨てた 。 回収した心筋細胞を 10 %ゥシ胎仔血清を含む D MEMで培養した。 (3) Next, the F1 mouse was bred to a C57 / Black mouse (Japan SLC). The ventricle was taken from a newborn F2 mouse (0 day old) and minced with ophthalmic scissors. To this, PBS containing 0.05% trypsin and 0.5 mM EDTA was added, the cells were treated at 37 ° C for 10 minutes, and the isolated cardiomyocytes were collected. This operation was repeated six times, and cardiomyocytes were collected. To this was added a DMEM medium containing 10% fetal calf serum, and cardiomyocytes were precipitated by low-speed centrifugation, and the supernatant was discarded. The recovered cardiomyocytes were cultured in DMEM containing 10% fetal calf serum.
(4)得られた心筋細胞をガラス底の培養皿 (ø 35mm) に移して底面に付着 させ、 無血清培地 (日本製薬製) 中で 6時間培養を行った。 次いで、 当該心筋培 養細胞に EGFを 1 00ng/ml添加し、 実施例 1の (5) に記載の蛍光顕微 鏡システムで観察した。 EGF添加にょる細胞内にぉけるECFPぉょびEYF Pの蛍光強度の経時的変化の結果を第 25図に示す。 トランスジヱニックマウス 由来の初代培養細胞でも E G F依存的に R a sの活性化が測定できることを確認 した。 実施例 7 Raf rasl722のグァニンヌクレオチド交換因子および GTP水解促進酵素 に対する特異性 (4) The obtained cardiomyocytes were transferred to a glass bottom culture dish (ø35 mm), allowed to adhere to the bottom, and cultured in a serum-free medium (Nippon Pharmaceutical) for 6 hours. Next, 100 ng / ml of EGF was added to the cultured myocardial cells, and the cells were observed with the fluorescence microscope system described in (5) of Example 1. FIG. 25 shows the results of the change over time in the fluorescence intensity of ECFP and EYFP in the cells upon addition of EGF. It was confirmed that the activation of Ras can be measured in an EGF-dependent manner even in primary cultured cells derived from transgenic mice. Example 7 Specificity of Raf rasl722 for guanine nucleotide exchange factor and GTP hydrolysis enzyme
実施例 1の (4) の実験において、 グァニンヌクレオチド交換因子および GTP水 解促進酵素を多数の種類を用いて Rafrasl722の特異性を検討した。 GTP水解促進 酵素およびグァニンヌクレオチド交換因子としては、 (文献 9) に記載の GAPlm 、 R-RasGAP, raplGAPII、 mSosl、 RasGRF, CalDAG-GEFI 、 C3G、 PDZ — GEF1、 KIAA0351の発現ベクターを用いた。 第 26図に示す如く、 Ras に対する GTP水解 促進酵素である GAPlmにより FRET効率の低下が認められるが、 R- Rasや Raplに対 する GTP水解促進酵素である R- RasGAPや raplGAPII によっては FRET効率は低下し ない。 また、 mSosl、 RasGRF、 CalDAG-GEFI Iといった Ras に対するグァニンヌク レオチド交換因子により FRET効率は上昇するが、 CalDAG- GEFI、 C3G、 PDZ-GEF1 、 KIAA0351といった他の Ras ファミリー G タンパク質を基質とするグァニンヌク レオチド交換因子によっては FRET効率は上昇しなかった。 これは、 Rafrasl722が Ras と同じグァニンヌクレオチド交換因子および GTP水解促進酵素によってその FRBT効率が特異的に制御されていることを示している。 実施例 8 Rap 1モニタ一である Rai-chu404の作成とそのグァニンヌクレオチド 交換因子および GTP水解促進酵素に対する特異性 In the experiment of (4) in Example 1, the specificity of Rafrasl722 was examined using many types of guanine nucleotide exchange factor and GTP hydrolysis promoter. As GTP water hydrolysis promoting enzyme and guanine nucleotide exchange factor, expression vectors of GAPlm, R-RasGAP, raplGAPII, mSosl, RasGRF, CalDAG-GEFI, C3G, PDZ-GEF1 and KIAA0351 described in (Reference 9) were used. As shown in Fig. 26, GAPlm, a GTP water-degrading enzyme for Ras, shows a decrease in FRET efficiency.However, FRET efficiency for some RTPases, R-RasGAP and raplGAPII, for R-Ras and Rapl can be reduced Drop Absent. In addition, guanine nucleotide exchange factors for Ras such as mSosl, RasGRF, and CalDAG-GEFI I increase FRET efficiency, but guanine nucleotide exchange using other Ras family G proteins such as CalDAG-GEFI, C3G, PDZ-GEF1, and KIAA0351 as substrates. FRET efficiency did not increase for some factors. This indicates that Rafrasl722 is specifically regulated in its FRBT efficiency by the same guanine nucleotide exchange factor and GTP hydrolysis enzyme as Ras. Example 8 Preparation of Rai-chu404, a Rap1 monitor, and its specificity for guanine nucleotide exchange factor and GTP hydrolysis enzyme
( 1 ) RaplAと Raf をコ一ドするキメラ遺伝子 Rai-chu404の作成 (1) Construction of chimeric gene Rai-chu404 encoding RaplA and Raf
公知の EGFP (Genbank /E BL ァクセッション番号: U76561) に対し、 PCR 法を用いる公知の方法により 7つのアミノ酸置換 (Thr66Gly; Val69Leu; Ser73A la; Metl54Thr; Vall64Ala; Serl76Gly; Thr204Tyr) をいれたものを、 実施例 3 に記載の pRai- chu311 の EYFPと制限酵素 EcoRI と Xholとを用いる切断およびライ ゲ一シヨンによる方法で置換した。 次に、 Rafrasl722の Raf 領域を含む Kpnl/Not I 断片を、 この pRai-chu311 由来のプラスミ ドの RalGDS領域を含む Kpnl/Notl 断 片と置換した。 このベクターを pRai- chu404 と命名した。 その翻訳領域の塩基配 列を配列番号: 3 0として、 また当該塩基配列から予測されるアミノ酸配列を配 列番号: 3 1 として示す。 A known amino acid substitution (Thr66Gly; Val69Leu; Ser73Ala; Metl54Thr; Vall64Ala; Serl76Gly; Thr204Tyr) in which known EGFP (Genbank / EBL accession number: U76561) has been replaced with seven amino acids by a known method using PCR. Was replaced with the method described in Example 3 by digestion with EYFP of pRaichu311 using restriction enzymes EcoRI and Xhol and ligation. Next, the Kpnl / NotI fragment containing the Raf region of Rafrasl722 was replaced with a Kpnl / Notl fragment containing the RalGDS region of the plasmid derived from pRai-chu311. This vector was named pRaichu404. The base sequence of the translation region is shown as SEQ ID NO: 30 and the amino acid sequence predicted from the base sequence is shown as SEQ ID NO: 31.
( 2 ) 実施例 7と同様に Rai-chu404の FRET効率に及ぼすグァニンヌクレオチド 交換因子の影響を調べた。 Raplに対するグァニンヌクレオチド交換因子としては PDZ-GEFK C3G、 CalDAG-GEFI、 CalDAG-GEFI I I を用いた。 また、 対照として Ra s に対するグァニンヌクレオチド交換因子である CalDAG-GEFI I、 mSosl、 RasGRF および Ral に対するグァニンヌクレオチド交換因子である KIAA0351を用いた。 こ れらのグァニンヌクレオチド交換因子は (文献 9 ) に記載がある。 実験の結果を 第 2 7図に示すように、 Raplに対するグァニンヌクレオチド交換因子のみが Rai- chu404の FRET効率を上昇せしめることがわかった。 実施例 9 Ki - Rasタンパク質の CAAXボックスを有する活性モニタータンパク質 Ra i-chul01X と Rai-chu404X の作成 (2) The effect of guanine nucleotide exchange factor on the FRET efficiency of Rai-chu404 was examined in the same manner as in Example 7. PDZ-GEFK C3G, CalDAG-GEFI, and CalDAG-GEFI II were used as guanine nucleotide exchange factors for Rapl. As controls, a guanine nucleotide exchange factor for Ras, CalDAG-GEFII, and a guanine nucleotide exchange factor for mSosl, RasGRF and Ral, KIAA0351, were used. These guanine nucleotide exchange factors are described in (Reference 9). As shown in Fig. 27, the results of the experiment show that only guanine nucleotide exchange factor for Rapl It was found that chu404 increased the FRET efficiency. Example 9 Preparation of Activity Monitor Proteins Rai-chul01X and Rai-chu404X Having CAAX Box of Ki-Ras Protein
実施例 1においてアンチセンスプライマー XFP-B g 1のかわりに制限酵素 Xbal の認識部位を含むプライマ一 (配列番号: 3 2 ) を用いて ECFPを増幅し、 (文献 1 1 ) に記載の方法で、 ECFPのカルボキシル末端に Ki— Ras タンパク質の CAAXボ ックスを融合せしめた。 これを Rafrasl722および Rai-chu404の ECFPと制限酵素と T4リガーゼを用いる方法で置換した。 得られたベクタ一をそれぞれ pRai-chulOIX および pRai-chu404Xと命名した。 それぞれの翻訳領域の塩基配列を配列番号: 3 3および配列番号: 3 5 Ϊして、 また当該塩基配列から予測されるアミノ酸配列 を配列番号: 3 4および配列番号: 3 6として示す。 実施例 1 0 Rai-chulOIXおよび Rai-chu404Xを発現する C0S1細胞における Ras 活性化の可視化 In Example 1, ECFP was amplified using a primer (SEQ ID NO: 32) containing a recognition site of a restriction enzyme Xbal instead of the antisense primer XFP-Bg1, and the method described in (Reference 11) was used. Then, the CAAX box of Ki-Ras protein was fused to the carboxyl terminus of ECFP. This was replaced by the method using Rafrasl722 and Rai-chu404 ECFP, restriction enzymes and T4 ligase. The resulting vectors were named pRai-chulOIX and pRai-chu404X, respectively. The nucleotide sequences of the respective translation regions are shown as SEQ ID NO: 33 and SEQ ID NO: 35, and the amino acid sequences predicted from the nucleotide sequences are shown as SEQ ID NO: 34 and SEQ ID NO: 36. Example 10 Visualization of Ras Activation in C0S1 Cells Expressing Rai-chulOIX and Rai-chu404X
C0S1細胞をガラス底の培養皿に巻きなおす。 実施例 9で得られた Rai- chulOIX および Rai-chu404Xを COS 1細胞に、 定法に従いトランスフヱクトした。 24時間 後に、 実施例 1の (5 ) に記載の蛍光顕微鏡システムで観察した。 EGF添加によ る細胞内における ECFPおよび EYFPの蛍光強度比 (EYFP/ECFP ) の経時的変化の結 果を第 2 8図に示す。 本図では蛍光比の高いところを赤で、 低いところを青色で 表し、 ECFPの蛍光強度を明度として表わす IMD モードを用いて図を提示している 。 すなわち、 原図においては赤いところが Ras あるいは Raplの活性化が高い部位 を示している。 第 2 8図では細胞増殖因子による刺激で Ras が細胞の周辺部より 活性化され、 Raplは核周囲から活性化される様子が画像化できた。 同様の実験を 、 細胞がやや密集した状態で行うと、 第 2 9図に示すように、 細胞が接触した部 位においては Ras の活性化が起きず、 細胞が接触していないところにおいて辺縁 部より Ras が活性化されることが明らかとなった。 このように、 本発明の活性モ 二夕一タンパク質を用いることにより、 細胞内で R a sフアミリー Gタンノ、。ク質 の活性に関する時間的、 空間的情報を取得することができる。 実施例 1 1 Rai-chulOIX および Rai-chu404Xを発現する PC12細胞における Ras 活性化の可視化 Rewind the C0S1 cells into a glass bottom culture dish. Rai-chulOIX and Rai-chu404X obtained in Example 9 were transfected into COS1 cells according to a standard method. Twenty-four hours later, observation was performed with the fluorescence microscope system described in Example 1, (5). FIG. 28 shows the results of the change over time in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of EGF. In this figure, a high fluorescence ratio is shown in red and a low fluorescence ratio is shown in blue, and the diagram is presented using the IMD mode in which the fluorescence intensity of ECFP is expressed as lightness. That is, in the original figure, the red area indicates the site where Ras or Rapl activation is high. In Fig. 28, Ras was activated from the periphery of cells by stimulation with cell growth factor, and Rapl was activated from the perinuclear area. When the same experiment is performed with the cells slightly confluent, as shown in Fig. 29, the activation of Ras does not occur in the area where the cells are in contact, and the margin is not in the area where the cells are not in contact. It was clear from the section that Ras was activated. Thus, the use of the active protein protein of the present invention allows intracellular Ras-amily G-tannos. Temporal and spatial information on the activity of the protein can be obtained. Example 11 1 Visualization of Ras activation in PC12 cells expressing Rai-chulOIX and Rai-chu404X
ガラス底の培養皿に増殖している PC12細胞に、 実施例 9で得られた Rai-chulOl Xおよび Rai- chu404X を定法に従いトランスフヱクトし、 実施例 1の ( 5 ) に記 載の蛍光顕微鏡システムで観察した。 神経成長因子にて添加による細胞内におけ る ECFPおよび EYFPの蛍光強度比 (EYFP/ECFP) の経時的変化の結果を第 3 0図に 示す。 原図では蛍光比の高いところを赤で、 低いところを青色で表し、 ECFPの蛍 光強度を明度として表わす IMD モードを用いて図を提示している。 すなわち、 原 図においては赤いところが Ras あるいは Raplの活性化が高い部位を示している。 PC12細胞の神経様分化においては、 分化の誘導期には Ras は細胞体で辺縁部から 活性化されるのに対し、 分化が完成した時期においては、 細胞の生存に必要な Ra s の活性は神経突起においてのみ維持されていることがわかった。 すなわち、 Ra s の活性化が細胞の分化の段階により、 細胞内の異なる部位で起きていることが 明らかとなった。 Ras とは全く対照的に Raplは神経成長因子の添加により核周囲 ぶより活性化され、 分化した神経突起においてはその活性は低く抑えられている ことが明らかとなった。 これは Ras ファミリー G タンパク質の活性が細胞内の異 なる場所では異なる制御を受けていることを示すものである。 実施例 1 2 R a c 1の活性モニタ一夕ンパク質である Rai-chulOl lXの作成 ( 1 ) R a c 1と P a k 1とをコードするキメラ遺伝子の作成 Rai-chulOlX and Rai-chu404X obtained in Example 9 were transfected into PC12 cells growing in a culture dish at the bottom of the glass according to a standard method, and the fluorescence microscope described in (5) of Example 1 was used. Observed on the system. FIG. 30 shows the results of the time-dependent changes in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of nerve growth factor. In the original figure, the part with high fluorescence ratio is shown in red and the part with low fluorescence ratio is shown in blue, and the figure is presented using IMD mode, which shows the fluorescence intensity of ECFP as brightness. That is, in the original figure, the red area indicates the site where Ras or Rapl activation is high. In neural-like differentiation of PC12 cells, Ras is activated from the periphery in the cell body during the induction phase of differentiation, whereas Ras activity required for cell survival is obtained at the completion of differentiation. Was found to be maintained only in neurites. In other words, it became clear that activation of Ra s occurred at different sites in the cell depending on the stage of cell differentiation. In sharp contrast to Ras, Rapl was activated by the addition of nerve growth factor from the perinuclear region, and its activity in differentiated neurites was found to be low. This indicates that the activity of Ras family G proteins is regulated differently in different parts of the cell. Example 1 2 Preparation of Rai-chulOlIX, which is an activity monitor of Ra c 1 activity protein (1) Preparation of chimeric gene encoding Ra c 1 and Pak 1
R a c 1の cDNA (Genbank/EMBL 了クセ ンョン番号: M29870) および P a k 1の cDNA (Genbank/EMBL了クセッション番号: NM002576) を铸型として、 PCR法により、 実施例 1および実施例 9の方法に従い、 プラスミ KpRai-chulOllXを得た。 p ai-chulO 11Xの構造 (第 31図) 、 その翻訳領域の塩基配列 (配列番号: 37) および予 測されるァミノ酸配列 (配列番号: 38) を示す。 Using the cDNA of Racl (Genbank / EMBL accession number: M29870) and the cDNA of Pak1 (Genbank / EMBL accession number: NM002576) as type III, According to the method of 1 and Example 9, Plasmid KpRai-chulOllX was obtained. The structure of p ai-chulO 11X (FIG. 31), the nucleotide sequence of its translated region (SEQ ID NO: 37) and the predicted amino acid sequence (SEQ ID NO: 38) are shown.
かかる塩基配列および予測されるァミノ酸配列を説明する : Illustrating such a base sequence and the predicted amino acid sequence:
nt 1 - 684: ォワンクラゲの EYFP nt 1-684: Owan jellyfish EYFP
nt 685 - 690 リンカー nt 685-690 linker
nt 691 - 939 Pak 1 nt 691-939 Pak 1
nt 940 - 969 リンカー NT 940-969 Linker
nt 970 - 1497: R a c 1 nt 970-1497: R a c 1
nt 1498 - 1506 リンカー nt 1498-1506 linker
nt 1507 - 2217 ォワンクラゲの ECFP nt 1507-2217 owan jellyfish ECFP
nt 2218 - 2229 リンカー nt 2218-2229 linker
nt 2230 - 2289 K-Ra sのカルボキシル末端領域 (CAAXボックス) nt 2230-2289 Carboxyl-terminal region of K-Ras (CAAX box)
(2) キメラ遺伝子の変異体の作成 (2) Creation of chimeric gene mutant
公知の PCRを用いる方法にて、 pRai-chul011Xの塩基配列 (配列番号: 37) における 1 004位の Gを Tに置換し、 予測されるアミノ酸 Glyを Val に置換し たものを pRai- chul012Xと命名した。 同様に、 1 0 1 9位の Cを Aに置換し、 予 測されるアミノ酸 Thrを Asnに置換したものを pRai- chul013Xと命名した。 タン パク質 Rai-chul012Xにおいては、 Rac 1の GT P水解活性が減少し、 恒常的活 性化型になることが予想される。 一方、 Rai- chul013Xにおいては、 Ra c 1の G TP結合能が減少し、 非活性化型になることが予想される。 By a known PCR method, the substitution of G at position 1004 in the nucleotide sequence of pRai-chul011X (SEQ ID NO: 37) with T, and the substitution of the predicted amino acid Gly with Val is referred to as pRai-chul012X. Named. Similarly, one in which C at position 109 was substituted with A and the predicted amino acid Thr was substituted with Asn was named pRai-chul013X. In the protein Rai-chul012X, the GTP hydrolytic activity of Rac 1 is expected to decrease and become a constitutively activated form. On the other hand, in Rai-chul013X, the GTP binding ability of Rac1 is expected to decrease and become inactive.
(3) ホ乳類細胞での Ra c 1の活性モニタータンパク質 (Rai- chulOllX)の発現 と分光光度計による解析 (3) Expression of Ra c 1 activity monitor protein (Rai-chulOllX) in mammalian cells and analysis by spectrophotometer
実施例 1の (4) に記載の方法により、 Rai-chul011X. Rai-chul012X、 または Rai-chul013Xを発現する細胞を用いて解析を行った。 得られた蛍光プロフィール を第 34図に示す。 活性化型と予想される Rai- chul012Xと比較して野生型 Rai-ch ulOllXおよび非活性化型と予想される Rai- chul013Xでは、 FRETの効率が低いこと 力わカヽる。 実施例 1 3 C d c 42の活性モニタ一タンパク質である Rai- chul054Xの作成 (1) Cdc 42と Pak 1とをコードするキメラ遺伝子の作成 Analysis was performed using cells expressing Rai-chul011X. Rai-chul012X or Rai-chul013X by the method described in (4) of Example 1. Fig. 34 shows the obtained fluorescence profile. Wild-type Rai-ch compared to Rai-chul012X, which is expected to be activated With ulOllX and Rai-chul013X, which is expected to be the non-activated form, the efficiency of FRET is low. Example 13 Preparation of Rai-chul054X, a Protein That Monitors the Activity of 3 Cdc42 (1) Preparation of Chimeric Gene Encoding Cdc42 and Pak1
C d c 42の cDNA (Genbank/EMBL了クセッシヨン番号: M57298) および P a k 1の cD A (Genbank/EMBL了クセ rンョン番号: NM002576) を铸型として、 PCR法により、 実施 例 1の方法に従い、 プラスミ ド pRai-chul054Xを得た。 pRai-chul054Xの構造 ( 第 32図) 、 その翻訳領域の塩基配列 (配列番号: 39) および予測されるアミ ノ酸配列 (配列番号: 40) を示す。 Using the cDNA of Cdc42 (Genbank / EMBL accession number: M57298) and the cDNA of Pak1 (Genbank / EMBL accession number: NM002576) as type I, by PCR, according to the method of Example 1, The plasmid pRai-chul054X was obtained. The structure of pRai-chul054X (FIG. 32), the nucleotide sequence of its translated region (SEQ ID NO: 39) and the predicted amino acid sequence (SEQ ID NO: 40) are shown.
かかる塩基配列および予測されるアミノ酸配列を説明する : Illustrating such a base sequence and the predicted amino acid sequence:
nt 1 - 684: ォワンクラゲの EYFP nt 1-684: Owan jellyfish EYFP
nt 685 - 690 リンカー nt 685-690 linker
nt 691 - 939 P a k 1 nt 691-939 Pak 1
nt 940 - 969 リンカ一 nt 940-969 linker
nt 970 - 1494 C d c 42 nt 970-1494 C d c 42
nt 1495 - 1503 リンカー nt 1495-1503 linker
nt 1504 - 2214 ォワンクラゲの ECFP nt 1504-2214 owan jellyfish ECFP
nt 2215 - 2226 リンカー nt 2215-2226 linker
nt 2227 - 2286 K— R a sのカルボキシル末端領域 (CAAXボックス) nt 2227-2286 K—Ras carboxyl terminal region (CAAX box)
(2) キメラ遺伝子の変異体の作成 (2) Creation of chimeric gene mutant
公知の PCRを用いる方法にて、 pRai-chul054Xの塩基配列 (配列番号: 39) における 1 001位の Gを Tに置換し、 予測されるアミノ酸 Glyを Val に置換し たものを pRai-chul052Xと命名した。 タンパク質 Rai-chul052Xにおいては、 Ra c 1の G T P水解活性が減少し、 恒常的活性化型になることが予想される。 A known PCR method was used to substitute pRai-chul052X with the substitution of G at position 1001 in the nucleotide sequence of pRai-chul054X (SEQ ID NO: 39) and substitution of the predicted amino acid Gly with Val. Named. In the protein Rai-chul052X, GTP hydrolytic activity of Rac1 is expected to decrease and become a constitutively activated form.
(3) ホ乳類培養細胞での Cd c 42の活性モニタ一タンパク質 (Rai-chul054X) の発現と分光光度計による解析 (3) Cdc42 activity monitor protein in cultured mammalian cells (Rai-chul054X) Expression and analysis by spectrophotometer
実施例 1の (4) に記載の方法により解析を行った。 Rai-chul054Xまたは Rai- chul052Xを発現する細胞を用いて解析を行った。 得られた蛍光プロフィールを第 35図に示す。 活性化型と予想される Rai-chul052Xと比較して野生型 Rai-chul05 4Xでは、 FRETの効率が低いことがわかる。 実施例 14 RhoAの活性モニタータンパク質である Rai-chul214Xの作成 The analysis was performed by the method described in (4) of Example 1. Analysis was performed using cells expressing Rai-chul054X or Rai-chul052X. The obtained fluorescence profile is shown in FIG. It can be seen that the wild type Rai-chul05 4X has a lower FRET efficiency than the activated Rai-chul052X. Example 14 Preparation of Rai-chul214X, RhoA Activity Monitor Protein
(1) 1^110八と1110 i a 1とをコードするキメラ遺伝子の作成 (1) Creation of chimeric gene encoding 1 ^ 110 eight and 1110 i a 1
Rh 0 Aの cDNA (Genbank/EMBL了クセッシヨン番号: L25080) および mD i a 1の cD NA (Genbank/EMBL了クセッション番号: E17361) を鎵型として、 PCR法により、 実施例 1の方法に従い、 プラスミ ド pRai-chul214Xを得た。 pRai-chul214Xの構造 (第 33図) 、 その翻訳領域の塩基配列 (配列番号: 4 1) および予測されるァミノ 酸配列 (配列番号: 42) を示す。 Using the cDNA of Rh0A (Genbank / EMBL accession number: L25080) and the cDNA of mDia1 (Genbank / EMBL accession number: E17361) as type 鎵, the plasmid was prepared by the PCR method according to the method of Example 1. De pRai-chul214X was obtained. The structure of pRai-chul214X (FIG. 33), the nucleotide sequence of its translated region (SEQ ID NO: 41) and the predicted amino acid sequence (SEQ ID NO: 42) are shown.
かかる塩基配列および予測されるアミノ酸配列を説明する : Illustrating such a base sequence and the predicted amino acid sequence:
nt 1 - 684: ォワンクラゲの EYFP nt 1-684: Owan jellyfish EYFP
nt 685 - 696: リンカ一 nt 685-696: Linker
nt 697 - 1092: mD i a 1 nt 697-1092: mD i a 1
nt 1093 - 1110 リンカ一 nt 1093-1110 linker
nt 1111 - 1677 RhoA nt 1111-1677 RhoA
nt 1678 - 1686 リンカー nt 1678-1686 linker
nt 1687 - 2397 ォワンクラゲの ECFP nt 1687-2397 Owan jellyfish ECFP
nt 2398一 2409 リンカー NT 2398-1 2409 Linker
nt 2410一 2469 K-Ra sのカルボキシル末端領域 (CAAXボックス) nt 2410-1 2469 K-Ras carboxyl terminal region (CAAX box)
(2) キメラ遺伝子の変異体の作成 (2) Creation of chimeric gene mutant
公知の PCR を用いる方法にて、 pRai-chul214Xの塩基配列 (配列番号: 41) における 1298位の Aを Tに、 1299位の Gを Cに置換し、 予測されるアミ ノ酸 Ginを Leuに置換したものを pRai-chul220Xと命名した。 タンパク質 Rai - ch U1220Xにおいては、 RhoAの GTP水解活性が減少し、 恒常的活性化型になることが 予想される。 By a known PCR method, the A at position 1298 in the nucleotide sequence of pRai-chul214X (SEQ ID NO: 41) was substituted with T, and the G at position 1299 was substituted with C, and the predicted amino acid was substituted. The product obtained by substituting Gin-noic acid for Leu was named pRai-chul220X. In the protein Rai-ch U1220X, the GTP hydrolytic activity of RhoA is expected to decrease and become a constantly activated form.
(3) ホ乳類細胞での Rh 0 Aの活性モニタ一タンパク質 (Rai-chul214X)の発現 と分光光度計による解析 (3) Expression of Rh 0 A activity monitor protein (Rai-chul214X) in mammalian cells and analysis by spectrophotometer
実施例 1の (4) に記載の方法により解析を行った。 Rai-chul214Xまたは Rai- chul220Xを発現する細胞を用いて解析を行った。 得られた蛍光プロフィールを第 36図に示す。 活性化型と予想される Rai-chul220Xと比較して野生型 Rai- chul21 4Xでは、 FRETの効率が低いことがわかる。 実施例 15 Rai- chulOllXおよび!? ai-chul054Xを発現する C0S1細胞における R a c 1活性化の可視化 The analysis was performed by the method described in (4) of Example 1. Analysis was performed using cells expressing Rai-chul214X or Rai-chul220X. The resulting fluorescence profile is shown in FIG. It can be seen that the wild-type Rai-chul214X has a lower FRET efficiency than the activated Rai-chul220X. Example 15 Rai-chulOllX and! Visualization of Rac1 activation in C0S1 cells expressing ai-chul054X
C0S1細胞をガラス底の培養皿に巻きなおす。 実施例 12で得られた pRai-chulO 11Xを C0S1細胞に、 定法に従いトランスフ クトした。 24時間後に実施例 1の (5) に記載の蛍光顕微鏡システムで観察した。 EGF添加による細胞内におけ る ECFPおよび EYFPの蛍光強度比 (EYFP/ECFP)の経時的変化の 結果を第 37図に示す。 第 37図では、 E G F刺激により、 R a c 1が 1分間以 内に速やかに細胞全体に活性化され、 やがて、 細胞辺縁部のラッフリングと呼ば れる細胞膜が運動している部分に活性化が収斂されていく様子が観察できた。 こ のように、 本発明の活性モニタータンパク質を用いることにより、 細胞内で Rh 0フアミリ一 GTP結合タンパク質の活性に関する時間的、 空間的定法を取得す ることができる。 また、 これは Ra sや Rap 1の活性化とも異なるものであり 、 これらの活性モニ夕一タンパク質分子の特異性を裏付ける結果でもある。 配列表フリーテキスト Rewind the C0S1 cells into a glass bottom culture dish. PRai-chulO 11X obtained in Example 12 was transfected into C0S1 cells according to a standard method. Twenty-four hours later, observation was performed with the fluorescence microscope system described in Example 1, (5). FIG. 37 shows the results of the change over time in the fluorescence intensity ratio of ECFP and EYFP (EYFP / ECFP) in the cells due to the addition of EGF. In Fig. 37, Rac 1 is rapidly activated in the whole cell within 1 minute by EGF stimulation, and the activation converges to a part where the cell membrane is moving, called ruffling at the cell margin. I was able to observe how it was being done. As described above, by using the activity monitor protein of the present invention, it is possible to obtain a temporal and spatial standard method for the activity of the Rh0 family GTP-binding protein in cells. This is also different from the activation of Ras and Rap1, which is a result that confirms the specificity of these active proteins. Sequence listing free text
配列番号: 1は、 制限酵素 X h 0 Iの切断部位の塩基配列とヒト H— Ra sの 塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 1 is the nucleotide sequence of the restriction enzyme Xh0I cleavage site and that of human H-Ras. This is the base sequence of the primer designed based on the base sequence.
配列番号: 2は、 ヒト c一 Ra f 1の塩基配列とヒト H— R a sの塩基配列を 基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 2 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human c-Raf 1 and the nucleotide sequence of human H-Ras.
配列番号: 3は、 制限酵素 K p n Iの切断部位の塩基配列とヒト c一 R a f 1 の塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 3 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a cleavage site of restriction enzyme KpnI and a nucleotide sequence of human c-Raf1.
配列番号: 4は、 制限酵素 N 0 t Iの切断部位の塩基配列とヒト c— R a f 1 の塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 4 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme N0tI and the nucleotide sequence of human c-Raf1.
配列番号: 5は、 p B 1 u e s c r i p t— SK I I (+) のマルティブルク ローニングサイトの 5' 側の塩基配列を基にデザインしたプライマーの塩基配列 である。 SEQ ID NO: 5 is a nucleotide sequence of a primer designed based on the nucleotide sequence on the 5 ′ side of the Martinburg roning site of pB1uescript—SKIII (+).
配列番号: 6は、 p B 1 u e s c r i p t— SK I I ( + ) のマルティブルク ローニングサイトの 3' 側の塩基配列を基にデザインしたプライマーの塩基配列 である。 SEQ ID NO: 6 is a nucleotide sequence of a primer designed based on the nucleotide sequence on the 3 ′ side of the Martinburg roning site of pB1uescript—SKIII (+).
配列番号: 7は、 制限酵素 B amH Iの切断部位の塩基配列と EYFPの塩基 配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 7 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme BamHI and the nucleotide sequence of EYFP.
配列番号: 8は、 制限酵素 BamHI、 Kpn Iおよび Xho Iの各々の切断 部位の塩基配列と E C F Pの塩基配列を基にデザィンしたプライマーの塩基配列 である。 SEQ ID NO: 8 is a nucleotide sequence of a primer designed based on the nucleotide sequence of each cleavage site of restriction enzymes BamHI, KpnI, and XhoI and the nucleotide sequence of ECFP.
配列番号: 9は、 制限酵素 No t Iの切断部位の塩基配列と EC FPの塩基配 列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 9 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Not I and the nucleotide sequence of ECFP.
配列番号: 10は、 制限酵素 Bg l I Iの切断部位の塩基配列と EC FPの塩 基配列を基にデザインしたプライマ一の塩基配列である。 SEQ ID NO: 10 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a cleavage site of restriction enzyme BglII and a nucleotide sequence of ECFP.
配列番号: 1 1は、 ヒト H— Ra s、 ヒト c一 Ra i l、 EYFPおよび EC F Pの各塩基配列を基にデザィンしたプラスミ ドの塩基配列である。 SEQ ID NO: 11 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H-Ras, human c-Rayl, EYFP and ECFP.
配列番号: 12は、 配列番号: 1 1のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 配列番号: 13は、 制限酵素 X h 0 Iの切断部位の塩基配列とヒト R a p 1 A の塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 12 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 11. SEQ ID NO: 13 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Xh0I and the nucleotide sequence of human Rap1A.
配列番号: 14は、 ヒト Ra 1 GDSの塩基配列とヒト Rap 1 Aの塩基配列 を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 14 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human Ra 1 GDS and the nucleotide sequence of human Rap 1A.
配列番号: 15は、 ヒト R a 1 GDSの塩基配列を基にデザインしたプライマ 一の塩基配列である。 SEQ ID NO: 15 is a nucleotide sequence of one primer designed based on the nucleotide sequence of human Ra1 GDS.
配列番号: 1 6は、 制限酵素 N 0 t Iの切断部位の塩基配列とヒト R a 1 G D Sの塩基配列を基にデザインしたプライマ一の塩基配列である。 SEQ ID NO: 16 is the nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme N0tI and the nucleotide sequence of human Ra1GDS.
配列番号: 17は、 制限酵素 BamHI、 Kpn Iおよび X ho Iの各々の切 断部位の塩基配列と E C F Pの塩基配列を基にデザィンしたプライマーの塩基配 列である。 SEQ ID NO: 17 is a nucleotide sequence of a primer designed based on the nucleotide sequence of each cleavage site of restriction enzymes BamHI, KpnI and XhoI and the nucleotide sequence of ECFP.
配列番号: 18は、 ヒト Rap 1 A、 ヒト Ra 1 GDS、 EYFPおよび EC F Pの各塩基配列を基にデザィンしたプラスミ ドの塩基配列である。 SEQ ID NO: 18 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human Rap1A, human Ra1GDS, EYFP and ECFP.
配列番号: 1 9は、 配列番号: 18のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 19 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 18.
配列番号: 20は、 制限酵素 X h 0 Iの切断部位の塩基配列とヒト R— R a s の塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 20 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme Xh0I and the nucleotide sequence of human R-Ras.
配列番号: 21は、 制限酵素 K p n Iの切断部位の塩基配列とヒト R_Ra s の塩基配列を基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 21 is a nucleotide sequence of a primer designed based on the nucleotide sequence of the cleavage site of restriction enzyme KpnI and the nucleotide sequence of human R_Ras.
配列番号: 22は、 ヒト R— Ra s、 ヒト c— Ra f l、 EYFPおよび EC F Pの各塩基配列を基にデザィンしたプラスミ ドの塩基配列である。 SEQ ID NO: 22 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human R-Ras, human c-Rafl, EYFP and ECFP.
配列番号: 23は、 配列番号: 22のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 23 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 22.
配列番号: 24は、 ヒト H— R a sの塩基配列を基にデザインしたプライマー の塩基配列である。 SEQ ID NO: 24 is a nucleotide sequence of a primer designed based on the nucleotide sequence of human H-Ras.
配列番号: 25は、 ヒト H— R a sの塩基配列を基にデザインしたプライマー の塩基配列である。 SEQ ID NO: 25 is a primer designed based on the nucleotide sequence of human H-Ras Is the base sequence.
配列番号: 26は、 ヒト H— Ra s、 ヒト c— Ra f l、 EYFPおよび EC F Pの各塩基配列を基にデザィンしたプラスミ ドの塩基配列である。 SEQ ID NO: 26 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H-Ras, human c-Rafl, EYFP and ECFP.
配列番号: 27は、 配列番号: 26のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 27 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 26.
配列番号: 28は、 ヒト c一 Ra f lのヒト H— Ra s結合領域の塩基配列を 基にデザインしたプライマーの塩基配列である。 SEQ ID NO: 28 is a nucleotide sequence of a primer designed based on a nucleotide sequence of a human H—Ras binding region of human c-Rafl.
配列番号: 29は、 ECFPの塩基配列を基にデザインしたプライマーの塩基 配列である。 SEQ ID NO: 29 is a nucleotide sequence of a primer designed based on the nucleotide sequence of ECFP.
配列番号: 30は、 ヒト Rap 1A、 ヒト c— Ra f 1、 EYFPおよび EC F Pの各塩基配列を基にデザィンしたプラスミ ドの塩基配列である。 SEQ ID NO: 30 is a plasmid base sequence designed based on each base sequence of human Rap1A, human c-Raf1, EYFP and ECFP.
配列番号: 3 1は、 配列番号: 30のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 31 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 30.
配列番号: 32は、 ECFPの塩基配列を基にデザインしたプライマーの塩基 配列である。 SEQ ID NO: 32 is a nucleotide sequence of a primer designed based on the nucleotide sequence of ECFP.
配列番号: 33は、 ヒト H_Ra s、 ヒト c_Ra f l、 EYFP. ECFP およびヒト K一 Ra sの各塩基配列を基にデザインしたプラスミ ドの塩基配列で める。 SEQ ID NO: 33 is given as a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human H_Ras, human c_Rafl, EYFP.ECFP and human K-Ras.
配列番号: 34は、 配列番号: 33のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 34 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 33.
配列番号: 35は、 ヒト Rap lA、 ヒト c— Ra f l、 EYFP. ECFP およびヒト K— Ra sの各塩基配列を基にデザインしたプラスミ ドの塩基配列で ある。 SEQ ID NO: 35 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human RaplA, human c-Rafl, EYFP.ECFP and human K-Ras.
配列番号: 36は、 配列番号: 35のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 36 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 35.
配列番号: 37は、 ヒト Ra c l、 ヒト Pak l、 EYFP. ECFPおよび ヒト K一 Ra sの各塩基配列を基にデザインしたプラスミ ドの塩基配列である。 配列番号: 38は、 配列番号: 37のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 37 is a fragment of human Ra cl, human Pak l, EYFP. This is a plasmid base sequence designed based on each base sequence of human K-Ras. SEQ ID NO: 38 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 37.
配列番号: 39は、 ヒト Cdc 42、 ヒト Pak l、 EYFP、 ECFPおよ びヒト K— Ra sの各塩基配列を基にデザインしたプラスミ ドの塩基配列である ο SEQ ID NO: 39 is a nucleotide sequence of a plasmid designed based on each nucleotide sequence of human Cdc42, human Pak1, EYFP, ECFP, and human K-Ras.
配列番号: 40は、 配列番号: 39のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 SEQ ID NO: 40 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 39.
配列番号: 41は、 ヒト RhoA、 ヒト mD i a 1、 EYFP、 ECFPおよ びヒト K一 Ra sの各塩基配列を基にデザインしたプラスミ ドの塩基配列である SEQ ID NO: 41 is a base sequence of a plasmid designed based on each base sequence of human RhoA, human mDia1, EYFP, ECFP, and human K-Ras
0 0
配列番号: 42は、 配列番号: 41のプラスミ ドの塩基配列から予測されるァ ミノ酸配列である。 産業上の利用可能性 SEQ ID NO: 42 is an amino acid sequence predicted from the base sequence of the plasmid of SEQ ID NO: 41. Industrial applicability
本発明によれば、 非侵襲的な低分子量 GTP結合タンパク質の活性化の測定を 可能にする低分子量 GTP結合タンパク質の活性モニタータンパク質、 該タンパ ク質を発現し、 非侵襲的な低分子量 GTP結合タンパク質の活性化の測定に有用 な細胞およびトランスジエニック動物、 前記タンパク質を用いる低分子量 GTP 結合タンパク質の活性化を測定する方法、 より詳しくは生細胞においても使用可 能な、 低分子量 G T P結合タンパク質の G T P結合型と G D P結合型の量比を測 定する方法、 ならびに低分子量 GTP結合タンパク質の活性調節物質のスクリー ニング方法が提供される。 According to the present invention, an activity monitor protein of a low-molecular-weight GTP-binding protein capable of measuring the activation of a non-invasive low-molecular-weight GTP-binding protein, a non-invasive low-molecular-weight GTP-binding protein expressing the protein Cells and transgenic animals useful for measuring protein activation, methods for measuring the activation of low-molecular-weight GTP-binding proteins using the proteins, and more specifically, low-molecular-weight GTP-binding proteins that can be used in living cells The present invention provides a method for measuring the amount ratio of GTP-bound to GDP-bound, and a method for screening a low-molecular-weight GTP-binding protein activity modulator.
Claims
Priority Applications (6)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US10/344,404 US20040053328A1 (en) | 2000-08-14 | 2001-08-13 | Monitoring proteins for the activities of low-molecular- weight gtp-binding proteins |
| AU7777501A AU7777501A (en) | 2000-08-14 | 2001-08-13 | Protein monitoring the activity of low-molecular weight gtp-binding protein |
| GB0305675A GB2383796B (en) | 2000-08-14 | 2001-08-13 | Fusion proteins for monitoring the activities of low-molecular weight GTP-binding proteins |
| AU2001277775A AU2001277775B2 (en) | 2000-08-14 | 2001-08-13 | Protein monitoring the activity of low-molecular weight GTP-binding protein |
| JP2002519510A JP3842729B2 (en) | 2000-08-14 | 2001-08-13 | Activity monitor protein for low molecular weight GTP binding protein |
| CA002419503A CA2419503A1 (en) | 2000-08-14 | 2001-08-13 | Protein monitoring the activity of low-molecular weight gtp-binding protein |
Applications Claiming Priority (6)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2000245910 | 2000-08-14 | ||
| JP2000-245910 | 2000-08-14 | ||
| JPPCT/JP01/00631 | 2001-01-31 | ||
| PCT/JP2001/000631 WO2001034766A2 (en) | 2000-08-14 | 2001-01-31 | Protein monitoring the activity of small gtp-binding protein |
| JPPCT/JP01/04421 | 2001-05-25 | ||
| PCT/JP2001/004421 WO2002014372A1 (en) | 2000-08-14 | 2001-05-25 | Activity monitor protein for low-molecular weight gtp-binding protein |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| WO2002014373A1 true WO2002014373A1 (en) | 2002-02-21 |
Family
ID=27278766
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PCT/JP2001/006967 Ceased WO2002014373A1 (en) | 2000-08-14 | 2001-08-13 | Protein monitoring the activity of low-molecular weight gtp-binding protein |
Country Status (4)
| Country | Link |
|---|---|
| AU (2) | AU2001277775B2 (en) |
| CA (1) | CA2419503A1 (en) |
| GB (1) | GB2383796B (en) |
| WO (1) | WO2002014373A1 (en) |
Cited By (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2012043477A1 (en) * | 2010-09-27 | 2012-04-05 | 国立大学法人京都大学 | Linker for unimolecular fret biosensor based on principle of fluorescence resonance energy transfer |
| US8889425B2 (en) | 2003-11-26 | 2014-11-18 | Bayerische Julius-Maximilians-Universität Würzburg | Means and methods for the determination of camp in vitro and in vivo |
Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2000008444A1 (en) * | 1998-08-08 | 2000-02-17 | Imperial Cancer Research Technology Limited | Fluorescent assay for biological systems |
| WO2001034766A2 (en) * | 2000-08-14 | 2001-05-17 | Michiyuki Matsuda | Protein monitoring the activity of small gtp-binding protein |
Family Cites Families (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6803188B1 (en) * | 1996-01-31 | 2004-10-12 | The Regents Of The University Of California | Tandem fluorescent protein constructs |
-
2001
- 2001-08-13 AU AU2001277775A patent/AU2001277775B2/en not_active Ceased
- 2001-08-13 CA CA002419503A patent/CA2419503A1/en not_active Abandoned
- 2001-08-13 AU AU7777501A patent/AU7777501A/en active Pending
- 2001-08-13 GB GB0305675A patent/GB2383796B/en not_active Expired - Fee Related
- 2001-08-13 WO PCT/JP2001/006967 patent/WO2002014373A1/en not_active Ceased
Patent Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2000008444A1 (en) * | 1998-08-08 | 2000-02-17 | Imperial Cancer Research Technology Limited | Fluorescent assay for biological systems |
| WO2001034766A2 (en) * | 2000-08-14 | 2001-05-17 | Michiyuki Matsuda | Protein monitoring the activity of small gtp-binding protein |
Non-Patent Citations (6)
| Title |
|---|
| BOS J.L. ET AL.: "Ras-like GTPases", BIOCHIM. BIOPHYS. ACTA, vol. 1333, no. 2, 1997, pages M19 - M31 * |
| FRANKE B. ET AL.: "Rapid Ca2+-mediated activation of Rap1 in human platelets", EMBO J., vol. 16, no. 2, 1997, pages 252 - 259 * |
| MIYAWAKI A. ET AL.: "Fluorescent indicator for Ca2+ based on green fluorescent proteins and calmodulin", NATURE, vol. 388, no. 6645, 1997, pages 882 - 887 * |
| MOCHIZUKI N. ET AL.: "Spatio-temporal images of growth-factor-induced activation of Ras and Rap1", NATURE, vol. 411, no. 6841, 28 June 2001 (2001-06-28), pages 1065 - 1068 * |
| OHBA F. ET AL.: "Regulatory proteins of R-Ras, TC21/R-Ras2 and M-Ras/R-Ras3", J. BIOL. CHEM., vol. 275, no. 26, June 2000 (2000-06-01), pages 20020 - 20026 * |
| TSIEN R.Y. ET AL.: "Seeing the machinery of live cells", SCIENCE, vol. 280, no. 5371, 1998, pages 1954 - 1955 * |
Cited By (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8889425B2 (en) | 2003-11-26 | 2014-11-18 | Bayerische Julius-Maximilians-Universität Würzburg | Means and methods for the determination of camp in vitro and in vivo |
| WO2012043477A1 (en) * | 2010-09-27 | 2012-04-05 | 国立大学法人京都大学 | Linker for unimolecular fret biosensor based on principle of fluorescence resonance energy transfer |
| US9103790B2 (en) | 2010-09-27 | 2015-08-11 | Kyoto University | Linker for unimolecular FRET biosensor based on principle of fluorescence resonance energy transfer |
| JP5802674B2 (en) * | 2010-09-27 | 2015-10-28 | 国立大学法人京都大学 | Single molecule FRET biosensor linker based on the principle of fluorescence resonance energy transfer |
Also Published As
| Publication number | Publication date |
|---|---|
| AU7777501A (en) | 2002-02-25 |
| GB2383796A (en) | 2003-07-09 |
| GB2383796B (en) | 2005-02-23 |
| GB0305675D0 (en) | 2003-04-16 |
| AU2001277775B2 (en) | 2007-09-06 |
| CA2419503A1 (en) | 2003-02-14 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US5962316A (en) | Cell-cycle regulatory proteins, and uses related thereto | |
| JP5802674B2 (en) | Single molecule FRET biosensor linker based on the principle of fluorescence resonance energy transfer | |
| US9908918B2 (en) | Cyan-excitable orange-red fluorescent proteins and bioluminescent resonance energy transfer systems | |
| DK2790018T3 (en) | PROCEDURE FOR DETECTING PROTEIN-PROTEIN INTERACTION | |
| US11267874B2 (en) | Sensor systems for target ligands and uses thereof | |
| Kumari et al. | Functional expression and biophysical properties of polymorphic variants of the human gap junction protein connexin37 | |
| WO2001034766A2 (en) | Protein monitoring the activity of small gtp-binding protein | |
| US20070212707A1 (en) | Cell cycle markers | |
| KR100626475B1 (en) | Peptides That Inhibit the Interaction Between Presenilin and Beta-amyloid Peptides or Their Precursors | |
| WO2002014373A1 (en) | Protein monitoring the activity of low-molecular weight gtp-binding protein | |
| US7691632B2 (en) | Kit for detecting the level of cyclin-dependent kinase inhibitor P16 gene expression | |
| JP3842729B2 (en) | Activity monitor protein for low molecular weight GTP binding protein | |
| JP6473080B2 (en) | Forster Resonance Energy Transfer Polypeptide | |
| US20020132340A1 (en) | Isogenic beta-catenin cell lines, and methods of making and using same | |
| KR20200114292A (en) | Composition for detecting protein-protein interactions comprising fragments of SEAP and method for detecting protein-protein interactions using the same | |
| US7713713B2 (en) | Polypeptide having intracellular calcium ion indicator function | |
| Tragl et al. | A fluorescent protein C-terminal fusion knock-in is functional with TRPA1 but not TRPC5 | |
| WO2026012400A1 (en) | NEW α-KETOGLUTARIC ACID OPTICAL PROBE, AND PREPARATION METHOD THEREFOR AND USE THEREOF | |
| Nwokonko | Understanding the Mechanism of Unimolecular Coupling between STIM and Orai | |
| CN116769045A (en) | Novel probe for detecting tryptophan, preparation method and application thereof | |
| ES2427854B1 (en) | Calcium sensors and methods for the detection of intracellular free calcium | |
| Logan | Functional aspects of Adenomatous Polyposis Coli protein dimerization and posttranslational regulation | |
| Laughery | Cellular localization and assembly of the Na, K-ATPase | |
| WO2005116219A1 (en) | Fluorescent protein | |
| Cheng | Identification of the molecular interaction between the dihydropyridine receptor beta subunit and the ryanodine receptor in skeletal muscle |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| AK | Designated states |
Kind code of ref document: A1 Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BY BZ CA CH CN CO CR CU CZ DE DK DM DZ EC EE ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NO NZ PL PT RO RU SD SE SG SI SK SL TJ TM TR TT TZ UA UG US UZ VN YU ZA ZW |
|
| AL | Designated countries for regional patents |
Kind code of ref document: A1 Designated state(s): GH GM KE LS MW MZ SD SL SZ TZ UG ZW AM AZ BY KG KZ MD RU TJ TM AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE TR BF BJ CF CG CI CM GA GN GQ GW ML MR NE SN TD TG |
|
| ENP | Entry into the national phase |
Ref document number: 0305675 Country of ref document: GB Kind code of ref document: A Free format text: PCT FILING DATE = 20010813 Format of ref document f/p: F |
|
| DFPE | Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101) | ||
| 121 | Ep: the epo has been informed by wipo that ep was designated in this application | ||
| WWE | Wipo information: entry into national phase |
Ref document number: 2002519510 Country of ref document: JP |
|
| WWE | Wipo information: entry into national phase |
Ref document number: 2419503 Country of ref document: CA |
|
| WWE | Wipo information: entry into national phase |
Ref document number: 2001277775 Country of ref document: AU |
|
| REG | Reference to national code |
Ref country code: DE Ref legal event code: 8642 |
|
| WWE | Wipo information: entry into national phase |
Ref document number: 10344404 Country of ref document: US |
|
| 122 | Ep: pct application non-entry in european phase |