TWI898254B - Perylenequinone derivatives, and preparation method and use thereof - Google Patents
Perylenequinone derivatives, and preparation method and use thereofInfo
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Abstract
Description
本發明是有關一種苝醌衍生物,尤其是一種具藥理活性的苝醌衍生物。The present invention relates to a perylenquinone derivative, particularly a pharmacologically active perylenquinone derivative.
全球每年有近90%的人口受到人類疱疹病毒(Epstein-Barr virus, EBV)感染,該病毒不僅會引發傳染性白血球增多症,同時也被認為與淋巴增生病變、頭頸癌、乳腺癌、系統性紅斑性狼瘡、維他命D缺乏症、慢性疲勞症候群、甲狀腺疾病、類風濕性關節炎、多發性硬化及其他自體免疫性疾病有關。目前臨床上多半使用其他病毒藥物(aciclovir、ganciclovir、valganciclovir等)或其他天然物(白藜蘆醇、木樨草素、兒茶素沒食子酸酯、薑黃素等)對抗EBV。雖然EBV在現階段並無處理上的急迫性,但前述引發的症狀加上與癌症的相關性,仍有必要針對該病毒進行藥物的開發。Each year, nearly 90% of the world's population is infected with the human herpes simplex virus (Epstein-Barr virus (EBV)). This virus not only causes infectious leukocytosis but is also thought to be associated with lymphoproliferative disorders, head and neck cancer, breast cancer, systemic lupus erythematosus, vitamin D deficiency, chronic fatigue syndrome, thyroid disease, rheumatoid arthritis, multiple sclerosis, and other autoimmune diseases. Currently, other antiviral drugs (aciclovir, ganciclovir, valganciclovir, etc.) or other natural products (resveratrol, luteolin, epigallocatechin gallate, curcumin, etc.) are mostly used clinically to combat EBV. Although EBV is not currently a critical issue for treatment, the symptoms it causes and its association with cancer warrant the development of drugs targeting this virus.
另一方面,苝醌(perylenequinone)主要是4,9-dihydroxyperylene-3,10-quinone作為骨架衍生的五環天然產物,目前已知的衍生物有85%源自真菌二次代謝物,其餘15%源自動物界與植物界,按其結構主要又可分成三大類,包含不含碳取代基的A類、含有碳取代基的B類以及含有額外脂環的C類(Weiss, U; Merlini, L.; Nasini, G.; Naturally occurring perylenequinones. In Forschritte der chemie organischer naturstoffe / Progress in the chamistry of organic natural products, Springer Vienna: Vienna, 1987; Vol. 70, pp 1-71, ISBN: 9783709189061)。在真菌界中,有82%的苝醌來自座囊菌綱(Dothideomycetes),其中在A類中又以鏈格孢菌屬( Alternaria)真菌產出最多且獨特性較高的結構。 Perylenequinone, on the other hand, is primarily a pentacyclic natural product derived from the 4,9-dihydroxyperylene-3,10-quinone skeleton. 85% of the currently known derivatives are derived from fungal secondary metabolites, while the remaining 15% originate from the animal and plant kingdoms. Based on their structure, they can be divided into three main categories: type A (without carbon substituents), type B (with carbon substituents), and type C (with additional aliphatic rings) (Weiss, U; Merlini, L.; Nasini, G.; Naturally occurring perylenequinones. In Forschritte der chemie organischer naturstoffe / Progress in the chamistry of organic natural products , Springer Vienna: Vienna, 1987; Vol. 70, pp 1-71, ISBN: 9783709189061). In the fungal kingdom, 82% of perylenequinones come from the Dothideomycetes, with Alternaria producing the most and most unique structures within Class A.
鏈格孢菌屬真菌可存在於植物中,例如為海洋植物的內生真菌。相較於陸生真菌,海洋真菌相對較晚進行開發與研究;惟自1990年之後,每年至少可從海洋真菌之二次代謝產物中分離出100種的化合物。至今已有超過1,000種海洋真菌二次代謝物被作為藥物開發的候選化合物。此外,相較於合成藥物,天然物擁有較高的化學多樣性與生物相容性,在抗癌、抗高血壓、抗感染、免疫抑制等藥物的開發上為重要來源。Chain Sporophytes can be found in plants, for example, as endophytes of marine plants. Compared to terrestrial fungi, marine fungi were explored and researched relatively recently. However, since 1990, at least 100 compounds have been isolated annually from their secondary metabolites. To date, over 1,000 marine fungal secondary metabolites have been identified as candidate compounds for drug development. Furthermore, natural products possess greater chemical diversity and biocompatibility than synthetic drugs, making them an important source for the development of drugs for cancer, hypertension, infection, and immunosuppression.
本發明提供一種式(I)所示的化合物、其立體異構物和/或其鹽,作為發展抗病毒及抗發炎藥物之活性成分。The present invention provides a compound represented by formula (I), its stereoisomers and/or salts thereof as active ingredients for the development of antiviral and anti-inflammatory drugs.
本發明所提供的式(I)所示的化合物、其立體異構物和/或其鹽 式(I), 其中:R1及R2分別獨立地選自-OR8、=O,R3及R4分別獨立地選自-OR9、鹵素;以及環A或環B為苯環;其中,當環B為苯環,C-1具有R5的取代基;當環A為苯環而環C不為苯環,C-6具有R6的取代基,且C-6a具有R7的取代基;其中R6為-SR10,且R5、R6、R7、R8、R9、R10分別獨立選自氫、鹵素、羥基、氰基、氨基、取代或非取代的烷基、取代或非取代的環烷基、取代或非取代的雜烷基、取代或非取代的雜環烷基、取代或非取代的芳基、取代或非取代的雜芳基、取代或非取代的醯胺基、酯基、醯基、羧基、磺醯基、磺醯胺基、取代或非取代的烯基、取代或非取代的炔基。 The present invention provides a compound represented by formula (I), its stereoisomers and/or its salts Formula (I), wherein: R1 and R2 are independently selected from -OR8, =0, R3 and R4 are independently selected from -OR9, halogen; and Ring A or Ring B is a benzene ring; wherein, when Ring B is a benzene ring, C-1 has a substituent of R5; when Ring A is a benzene ring and Ring C is not a benzene ring, C-6 has a substituent of R6, and C-6a has a substituent of R7; wherein R6 is -SR10, and R5, R6, R7, R8, R9 and R10 are each independently selected from hydrogen, halogen, hydroxyl, cyano, amino, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted heterocycloalkyl, substituted or unsubstituted aryl, substituted or unsubstituted heteroaryl, substituted or unsubstituted amide, ester, acyl, carboxyl, sulfonyl, sulfonamide, substituted or unsubstituted alkenyl, and substituted or unsubstituted alkynyl.
在本發明的一實施例中,上述之R8為氫,R9選自氫及取代或非取代的低碳烷基。In one embodiment of the present invention, R8 is hydrogen, and R9 is selected from hydrogen and substituted or unsubstituted lower alkyl.
在本發明的一實施例中,上述之R3及R4分別獨立地選自氯、羥基及-OCH 3,且R3與R4不同。 In one embodiment of the present invention, R3 and R4 are independently selected from chloro, hydroxyl and -OCH 3 , and R3 and R4 are different.
在本發明的一實施例中,上述之R3及R4之至少之一為羥基。In one embodiment of the present invention, at least one of R3 and R4 is a hydroxyl group.
在本發明的一實施例中,上述之R10為取代或非取代的C1~C6羧基,且取代基選自鹵素、羥基、氨基、C1~C6烷基、2~7元雜烷基、酯基、醯基、醯胺基。In one embodiment of the present invention, the aforementioned R10 is a substituted or unsubstituted C1-C6 carboxyl group, and the substituent is selected from a halogen, a hydroxyl, an amino, a C1-C6 alkyl, a 2-7 membered heteroalkyl, an ester, an acyl, and an amide group.
在本發明的一實施例中,當上述之環A為苯環,R1為-OR8,R2為=O;當環B為苯環,R1為=O,R2為-OR8。In one embodiment of the present invention, when the aforementioned ring A is a benzene ring, R1 is -OR8, and R2 is =O; when the ring B is a benzene ring, R1 is =O, and R2 is -OR8.
在本發明的一實施例中,上述之式(I)所示的化合物、其立體異構物和/或其鹽更具有式 (I-1)、式 (I-2)或式 (I-3)所示結構 式 (I-1); 式 (I-2); 式 (I-3)。 In one embodiment of the present invention, the compound represented by the above formula (I), its stereoisomers and/or its salts further have the structure represented by formula (I-1), formula (I-2) or formula (I-3): Formula (I-1); Formula (I-2); Formula (I-3).
在本發明的一實施例中,上述之式(I)所示的化合物、其立體異構物和/或其鹽更具有式 (i-1)、式 (i-2)、式(i-3)或式 (i-4)所示結構 式 (i-1); 式 (i-2); 式 (i-3); 式 (i-4)。 In one embodiment of the present invention, the compound represented by the above formula (I), its stereoisomers and/or its salts further have the structure represented by formula (i-1), formula (i-2), formula (i-3) or formula (i-4): Formula (i-1); Formula (i-2); Formula (i-3); Formula (i-4).
在本發明的一實施例中,上述之式(I)所示的化合物、其立體異構物和/或其鹽更具有式(i-3-1)或式 (i-3-2)所示結構 式(i-3-1); 式 (i-3-2)。 In one embodiment of the present invention, the compound represented by the above formula (I), its stereoisomers and/or its salts further have the structure represented by formula (i-3-1) or formula (i-3-2) Formula (i-3-1); Formula (i-3-2).
在本發明的一實施例中,上述之式(I)所示的化合物、其立體異構物和/或其鹽是由鏈格孢菌屬真菌的二次代謝物分離而得。In one embodiment of the present invention, the compound represented by the above formula (I), its stereoisomers and/or its salts are obtained by isolating the secondary metabolites of the fungus of the genus Chain Sporangium.
在本發明的一實施例中,上述之鏈格孢菌屬真菌在環境中進行曝氣醱酵而產生二次代謝物,且環境中含有海水的成分。In one embodiment of the present invention, the aforementioned Chain Sporophora fungus undergoes aeration and fermentation in an environment containing seawater to produce secondary metabolites.
在本發明的一實施例中,上述之式(I)所示的化合物、其立體異構物和/或其鹽是由二次代謝物經萃取、管柱層析、正相薄層層析分析以及高效能液相層析分離純化而得;其中,鏈格孢菌屬真菌為 Alternaria alstroemeriae。 In one embodiment of the present invention, the compound of formula (I), its stereoisomers, and/or salts thereof are obtained by extraction of secondary metabolites, column chromatography, normal phase thin layer chromatography, and high performance liquid chromatography separation; wherein the Alternaria fungus is Alternaria alstroemeriae .
本發明還提供一種式(I)所示的化合物、其立體異構物和/或其鹽的製備方法。The present invention also provides a method for preparing the compound represented by formula (I), its stereoisomers and/or its salts.
本發明還提供一種使用式(I)所示的化合物、其立體異構物和/或其鹽製備抗病毒或抗發炎之藥物的用途。The present invention also provides a method for preparing an antiviral or anti-inflammatory drug using the compound represented by formula (I), its stereoisomers and/or its salts.
為讓本發明之上述和其他目的、特徵和優點能更明顯易懂,下文特舉實施例,並配合所附圖式,作詳細說明如下。In order to make the above and other purposes, features and advantages of the present invention more clearly understood, the following embodiments are specifically cited and described in detail with reference to the accompanying drawings.
本發明可藉由下部分中詳細描述的多種發明實施態樣及其中之實施例,並藉由先前及下部份描述中的化學圖式及表格而可更容易瞭解。儘管說明書已揭示及描述本發明的化合物、組合物及/或方法,但應瞭解除非申請專利範圍中有作特定的指示,本發明並不限定於特定的製備方法,因本發明所屬技術領域中具有通常知識者可完全瞭解該等物品係確實可改變者。同時應可瞭解,本文所用的術語僅係用於描述特定實施態樣,而非作為限定。The present invention can be more readily understood through the various embodiments and examples described in detail below, as well as through the chemical diagrams and tables described above and below. Although the present invention's compounds, compositions, and/or methods have been disclosed and described herein, it should be understood that unless otherwise specified in the claims, the present invention is not limited to a specific method of preparation, as those skilled in the art will readily appreciate that such methods are inherently variable. It should also be understood that the terminology used herein is intended only to describe specific embodiments and is not intended to be limiting.
本文中所使用的術語,除非另有解釋,當可瞭解其具有列之定義:術語「經分離」或「分離」意旨該物質已由其原屬之環境(如,天然環境,若該物質係天然存在者)中移除。該術語「經分離」並不必要意味其可擴張為該物質已經純化。As used herein, unless otherwise specified, the terms "isolated" or "isolated" mean that the substance has been removed from its native environment (e.g., the natural environment, if the substance occurs naturally). The term "isolated" does not necessarily extend to mean that the substance has been purified.
一、本發明之化合物1. Compounds of the Present Invention
本發明提供一種式(I)所示的化合物、其立體異構物和/或其鹽 式(I), 其中:(1) R1及R2分別獨立地選自-OR8、=O,R3及R4分別獨立地選自-OR9、鹵素,(2) 環A或環B為苯環。當環B為苯環,C-1具有R5的取代基。當環A為苯環而環C不為苯環,C-6具有R6的取代基,且C-6a具有R7的取代基。R6為-SR10,且R5、R6、R7、R8、R9、R10分別獨立選自氫、鹵素、羥基、氰基、氨基、取代或非取代的烷基、取代或非取代的環烷基、取代或非取代的雜烷基、取代或非取代的雜環烷基、取代或非取代的芳基、取代或非取代的雜芳基、取代或非取代的醯胺基、酯基、醯基、羧基、磺醯基、磺醯胺基、取代或非取代的烯基、取代或非取代的炔基。 The present invention provides a compound represented by formula (I), its stereoisomers and/or its salts Formula (I), wherein: (1) R1 and R2 are independently selected from -OR8, =0, R3 and R4 are independently selected from -OR9, halogen, (2) Ring A or Ring B is a benzene ring. When Ring B is a benzene ring, C-1 has a substituent of R5. When Ring A is a benzene ring and Ring C is not a benzene ring, C-6 has a substituent of R6, and C-6a has a substituent of R7. R6 is -SR10, and R5, R6, R7, R8, R9, and R10 are each independently selected from hydrogen, a halogen, a hydroxyl group, a cyano group, an amino group, a substituted or unsubstituted alkyl group, a substituted or unsubstituted cycloalkyl group, a substituted or unsubstituted heteroalkyl group, a substituted or unsubstituted heterocycloalkyl group, a substituted or unsubstituted aryl group, a substituted or unsubstituted heteroaryl group, a substituted or unsubstituted amide group, an ester group, an acyl group, a carboxyl group, a sulfonyl group, a sulfonamide group, a substituted or unsubstituted alkenyl group, and a substituted or unsubstituted alkynyl group.
在式(I)所示的化合物之某些態樣中,R8為氫,R9選自氫及取代或非取代的低碳烷基。In certain aspects of the compound represented by formula (I), R8 is hydrogen, and R9 is selected from hydrogen and substituted or unsubstituted lower alkyl.
在式(I)所示的化合物之某些態樣中,R3及R4分別獨立地選自氯、羥基及-OCH 3,且R3與R4不同。在一較佳之態樣中,R3及R4之至少之一為羥基。 In certain embodiments of the compound of formula (I), R3 and R4 are independently selected from chloro, hydroxyl, and -OCH 3 , and R3 and R4 are different. In a preferred embodiment, at least one of R3 and R4 is hydroxyl.
在式(I)所示的化合物之某些態樣中,R10為取代或非取代的C1~C6羧基,且取代基選自鹵素、羥基、氨基、C1~C6烷基、2~7元雜烷基、酯基、醯基、醯胺基。In certain aspects of the compound represented by formula (I), R10 is a substituted or unsubstituted C1-C6 carboxyl group, and the substituent is selected from a halogen, a hydroxyl, an amino, a C1-C6 alkyl, a 2-7 membered heteroalkyl, an ester, an acyl, and an amide group.
在式(I)所示的化合物之某些態樣中,當環A為苯環,R1為-OR8,R2為=O。當環B為苯環,R1為=O,R2為-OR8。In certain aspects of the compound represented by formula (I), when ring A is a benzene ring, R1 is -OR8, and R2 is =0. When ring B is a benzene ring, R1 is =0, and R2 is -OR8.
在某些態樣中,式(I)所示的化合物更具有式 (I-1)、式 (I-2)或式 (I-3)所示結構 式 (I-1); 式 (I-2); 式 (I-3)。 In certain aspects, the compound represented by formula (I) further has a structure represented by formula (I-1), formula (I-2) or formula (I-3) Formula (I-1); Formula (I-2); Formula (I-3).
在某些態樣中,式(I-1)所示的化合物更具有式 (i-1)或式 (i-2)所示結構,式(I-2)所示的化合物更具有式 (i-3)所示結構,式(I-3)所示的化合物更具有式 (i-4)所示結構。In certain embodiments, the compound represented by formula (I-1) further has the structure represented by formula (i-1) or formula (i-2), the compound represented by formula (I-2) further has the structure represented by formula (i-3), and the compound represented by formula (I-3) further has the structure represented by formula (i-4).
二、本發明之化合物的製備方法2. Preparation Methods of the Compounds of the Present Invention
在本發明一實施例中,式(I)所示的化合物來自於例如鏈格孢菌屬( Alternaria)之真菌。鏈格孢菌屬( Alternaria)在自然界中可涵蓋腐生真菌、內生真菌以及致病真菌,在種子、植物、農產品、動物、土壤和大氣中皆可發現其蹤跡。在本發明較佳實施例中,式(I)化合物所來自的鏈格孢菌屬( Alternaria)真菌並為濱海植物如海芙蓉的內生真菌。 In one embodiment of the present invention, the compound represented by formula (I) is derived from a fungus, such as Alternaria . Alternaria encompasses saprophytic, endophytic, and pathogenic fungi in nature and can be found in seeds, plants, agricultural products, animals, soil, and the atmosphere. In a preferred embodiment of the present invention, the Alternaria fungus from which the compound of formula (I) is derived is an endophytic fungus of a coastal plant, such as Hibiscus maritima.
海芙蓉主要分為兩品種,其中之一為藜科的馬氏濱藜( Atriplex maximowiczianaMakino)。馬氏濱藜主要分布於金門的濱海沙灘,屬於藥用植物。在本發明一實施例中,式(I)所示的化合物來自於馬氏濱藜的鏈格孢菌屬的內生真菌。內生真菌可存在於植物的莖、葉、根、芽等組織中。在本發明較佳實施例中,式(I)所示的化合物來自於馬氏濱藜的內生真菌 Alternaria alstroemeriaeKm2286菌株。 There are two main species of sea hibiscus, one of which is Atriplex maximowicziana Makino, a member of the Chenopodiaceae family. Atriplex maximowicziana Makino is primarily found on the coastal beaches of Kinmen and is a medicinal plant. In one embodiment of the present invention, the compound represented by formula (I) is derived from an endophytic fungus of the genus Alternaria from Atriplex maximowicziana Makino. Endophytic fungi can be found in plant tissues such as stems, leaves, roots, and buds. In a preferred embodiment of the present invention, the compound represented by formula (I) is derived from the endophytic fungus strain Km2286 of Atriplex maximowicziana Makino.
在本發明一實施例中,製備式(I)所示的化合物之方法包含以下步驟: (a) 培養 Alternaria alstroemeriae並進行曝氣醱酵,產生醱酵液; (b) 分離醱酵液以進行萃取,得到萃取物; (c) 進行萃取物之分離與純化,獲得式(I)所示化合物。 In one embodiment of the present invention, a method for preparing a compound represented by formula (I) comprises the following steps: (a) cultivating Alternaria alstroemeriae and performing aerated fermentation to produce a fermentation broth; (b) separating the fermentation broth and performing extraction to obtain an extract; and (c) separating and purifying the extract to obtain the compound represented by formula (I).
本發明之化合物的製備方法實施例Examples of Preparation Methods of the Compounds of the Present Invention
實施例1:真菌培養及曝氣醱酵Example 1: Fungal culture and aerated fermentation
1.1 真菌之取得及菌株分離與篩選 新鮮馬氏濱藜樣本採集自金門蓮湖。攜回後以大量自來水清洗植物體外部,接著將莖與葉切成小塊狀 (0.5 cm 2),平貼於含penicillin (50 ppm) 和streptomycin (50 ppm)的PDA培養基,以抑制雜菌生長。待菌絲長出後立即接種至新的PDA培養基上,反覆分離至菌絲顏色不再改變且菌絲型態一致,即確認為純的菌株。 1.1 Fungal Acquisition, Strain Isolation, and Screening: Fresh samples of T. truncatula were collected from Lotus Lake in Kinmen. After harvest, the plants were washed with plenty of tap water. The stems and leaves were then cut into small pieces (0.5 cm² ) and placed flat on PDA culture medium supplemented with penicillin (50 ppm) and streptomycin (50 ppm) to inhibit the growth of contaminants. Once hyphae emerged, they were immediately inoculated onto fresh PDA culture medium. Repeated isolation was performed until the hyphae maintained color and maintained a consistent appearance, confirming the isolate as pure.
1.2 真菌培養及曝氣醱酵 1.2.1 培養基製備 1.2.1.1 固態培養基:PDA培養基。使每100 mL去離子水中含2g馬鈴薯葡萄糖瓊脂,在121℃下滅菌20分鐘,分別倒入培養皿中,冷卻後即可作為固態培養基。 1.2.1.2 液態培養基:PDY培養基。使每1L去離子水中含2g蛋白腖、10g葡萄糖及1g酵母萃取物,於5L血清瓶中注入3.5 L培養基,在121℃下滅菌20分鐘,冷卻後即可作為培養真菌之醱酵槽。 1.2.2 將1.1所分離之菌株 Alternaria alstroemeriaeKm2286接種至6個直徑5.5 cm之PDA培養基,於37℃培養7天後,將每盤長滿菌絲的PDA培養基平均切成16小塊,取8小塊接種至含有3.5 L海水之PDY培養基的5L血清瓶中,在室溫大量曝氣醱酵14天,培養的總體積為12瓶共42L。 1.2 Fungal Culture and Aerated Fermentation 1.2.1 Culture Medium Preparation 1.2.1.1 Solid Culture Medium: PDA Culture Medium. Prepare 2g of potato dextrose agar per 100mL of deionized water. Sterilize at 121°C for 20 minutes. Pour the mixture into separate culture dishes and allow to cool before using as the solid culture medium. 1.2.1.2 Liquid Culture Medium: PDY Culture Medium. Prepare 2g of peptone, 10g of glucose, and 1g of yeast extract per 1L of deionized water. Pour 3.5L of the culture medium into a 5L serum bottle and sterilize at 121°C for 20 minutes. Allow to cool before using as the fermentation tank for fungal culture. 1.2.2 Inoculate six 5.5 cm diameter plates of PDA medium with the strain Alternaria alstroemeriae Km2286 isolated in 1.1. After incubation at 37°C for 7 days, cut each plate of PDA medium, which is full of hyphae, into 16 equal pieces. Inoculate 8 of these pieces into 5 L serum bottles containing PDY medium supplemented with 3.5 L of seawater. Ferment with extensive aeration at room temperature for 14 days, bringing the total culture volume to 42 L in 12 bottles.
實施例1還可更包括抗病毒活性篩選及菌種鑑定。菌種鑑定可包括使用顯微型態與28S rRNA分子序列鑑定分離之菌株為 Alternaria alstroemeriae。 Example 1 may further include antiviral activity screening and strain identification. Strain identification may include using microscopy and 28S rRNA sequence analysis to identify the isolated strain as Alternaria alstroemeriae .
實施例2:醱酵液萃取 移除1.2.2中、培養14天後之12瓶血清瓶的曝氣裝置,利用抽氣過濾分離菌絲體和醱酵液。接著將醱酵液以1.3倍體積的萃取溶劑分配萃取兩次,減壓濃縮獲得乙酸乙酯萃取物約4.8 g。萃取溶劑可為例如乙酸乙酯、正丁醇、氯仿、二氯甲烷但不以此為限。在本實施例中較佳使用乙酸乙酯。 Example 2: Fermentation Broth Extraction Remove the aeration system from the 12 serum bottles after 14 days of incubation in 1.2.2. Mycelium and fermentation broth were separated by vacuum filtration. The fermentation broth was then divided and extracted twice with 1.3 times the volume of the extraction solvent. The broth was concentrated by decompression to obtain approximately 4.8 g of ethyl acetate extract. The extraction solvent can be, but is not limited to, ethyl acetate, n-butanol, chloroform, or dichloromethane. In this example, ethyl acetate is preferred.
實施例3:萃取物之分離與純化Example 3: Separation and purification of the extract
3.1 管柱層析法分離萃取物 將實施例2之萃取物例如乙酸乙酯萃取物4.8 g回溶於沖提溶劑。沖提溶劑可為例如甲醇、乙醇,但不以此為限。在本實施例中,較佳將乙酸乙酯萃取物回溶於10 mL甲醇,以甲醇為沖提液進行Sephadex LH-20 (2.8 cm i.d. × 68.3 cm)管柱層析,流速為2.5 mL/min,每25 mL (約經10分鐘)收集一管,共收集60管。依其正相薄層層析片(TLC)分析結果,例如依據Rf值,合併為11個分液(分液1~11)。在11個分液中,分液7和10的TLC分析結果相對單純,利於分離純化。 3.1 Column Chromatography Separation of Extracts The extract from Example 2, for example, 4.8 g of the ethyl acetate extract, was redissolved in an extraction solvent. The extraction solvent may be, but is not limited to, methanol or ethanol. In this example, the ethyl acetate extract was preferably redissolved in 10 mL of methanol and subjected to column chromatography on a Sephadex LH-20 (2.8 cm i.d. × 68.3 cm) column using methanol as the eluent at a flow rate of 2.5 mL/min. One tube was collected every 25 mL (approximately 10 minutes), for a total of 60 tubes. The fractions were then pooled into 11 fractions (fractions 1-11) based on the results of normal phase thin layer chromatography (TLC) analysis, for example, based on Rf values. Among the 11 fractions, the TLC analysis results of fractions 7 and 10 were relatively pure, facilitating separation and purification.
3.2 高效能液相層析法(HPLC)分離及純化分液1~11 3.2.1 高效能液相層析系統: RI Detector: Bischoff RI-8120 (Bischoff, Leonberg, Germany) Pump: Hitachi L-7100 (Hitachi, Tokyo, Japan) 3.2.2 分離純化得化合物1: 將分液7以逆相HPLC進行純化,使用Phenomenex Luna 5μ PFP半製備管柱(10×250 mm),配合RI偵測儀進行檢測,流動相為40%ACN+0.1%FA,流速為2mL/min,於滯留時間16.0 min,得到化合物 1 (5.0 mg)。化合物1在正相TLC的Rf值為0.40 (DCM:MeOH = 10:1)。 3.2.3 分離純化得化合物2: 將分液10以逆相HPLC進行純化,使用SunFire 5μ C18半製備管柱(10×250 mm),配合RI偵測儀進行檢測,流動相為40%ACN+0.1%FA,流速為2mL/min,於滯留時間32.5 min,得到化合物 2 (3.4 mg)。化合物2在正相TLC的Rf值為0.53 (DCM:MeOH = 10:1)。 3.2.4 分離純化得化合物3: 將分液7以逆相HPLC進行純化,使用Phenomenex Luna 5μ PFP半製備管柱(10×250 mm),配合RI偵測儀進行檢測,流動相為40%ACN+0.1%FA,流速為2mL/min,於滯留時間9.4 min,得到化合物 3 (6.4 mg)。化合物3在正相TLC的Rf值為0.53 (DCM:MeOH = 10:1)。 3.2.5 分離純化得化合物4: 將分液7以逆相HPLC進行純化,使用Phenomenex Luna 5μ PFP半製備管柱(10×250 mm),配合RI偵測儀進行檢測,流動相為40%ACN+0.1%FA,流速為2mL/min,收取滯留時間5~14 min的含化合物液體,再使用Phenomenex Luna 5μ PFP半製備管柱(10×250 mm),配合RI偵測儀進行檢測,流動相為30%ACN+0.1%FA,流速為2mL/min,於滯留時間14.1 min,得到化合物 4 (8.2 mg)。化合物4在正相TLC的Rf值為0.23 (DCM:MeOH = 10:1)。 3.2 Separation and Purification of Fractions 1–11 by High-Performance Liquid Chromatography (HPLC) 3.2.1 HPLC System: RI Detector: Bischoff RI-8120 (Bischoff, Leonberg, Germany) Pump: Hitachi L-7100 (Hitachi, Tokyo, Japan) 3.2.2 Separation and Purification of Compound 1: Fraction 7 was purified by reverse-phase HPLC using a Phenomenex Luna 5μ PFP semi-preparative column (10 × 250 mm) with an RI detector. The mobile phase consisted of 40% ACN + 0.1% FA at a flow rate of 2 mL/min. Compound 1 (5.0 mg) was obtained at a retention time of 16.0 min. The Rf value of compound 1 on normal phase TLC was 0.40 (DCM:MeOH = 10:1). 3.2.3 Isolation and Purification of Compound 2: Fraction 10 was purified by reverse phase HPLC using a SunFire 5μ C18 semi-preparative column (10×250 mm) with an RI detector for detection. The mobile phase consisted of 40% ACN + 0.1% FA at a flow rate of 2 mL/min. Compound 2 (3.4 mg) was obtained at a retention time of 32.5 min. The Rf value of compound 2 on normal phase TLC was 0.53 (DCM:MeOH = 10:1). 3.2.4 Isolation and Purification of Compound 3: Fraction 7 was purified by reverse-phase HPLC using a Phenomenex Luna 5μ PFP semi-preparative column (10×250 mm) with an RI detector. The mobile phase consisted of 40% ACN + 0.1% FA at a flow rate of 2 mL/min. Compound 3 (6.4 mg) was obtained at a retention time of 9.4 min. The Rf value of compound 3 on normal-phase TLC was 0.53 (DCM:MeOH = 10:1). 3.2.5 Isolation and Purification of Compound 4: Fraction 7 was purified by reverse-phase HPLC using a Phenomenex Luna 5μ PFP semi-preparative column (10×250 mm) with an RI detector. The mobile phase consisted of 40% ACN + 0.1% FA at a flow rate of 2 mL/min. The compound-containing fraction was collected between 5 and 14 minutes and then further purified using a Phenomenex Luna 5μ PFP semi-preparative column (10×250 mm) with a RI detector at a flow rate of 2 mL/min. Compound 4 (8.2 mg) was obtained at a retention time of 14.1 minutes. The Rf value of compound 4 on normal-phase TLC was 0.23 (DCM:MeOH = 10:1).
三、本發明之化合物的物理性質與結構3. Physical Properties and Structure of the Compounds of the Present Invention
本發明之化合物的物理性質測定及結構解析實施例Examples of Physical Property Measurement and Structural Analysis of the Compounds of the Present Invention
實施例4:化合物1~4之物理性質測定及結構解析Example 4: Physical property determination and structural analysis of compounds 1 to 4
4.1 物理性質測定儀器 HRESIMS: Q Extractive Plus Hybrid Quadrupole-Orbitrap Mass Spectrometer (Thermo Fischer Scientific, Bremen, Germany) IR: JASCO FT/IR 4100 spectrometer (Tokyo, Japan) NMR: Bruker AVIII HD 400 and AVIII-500 spectrpmeter (Bruker, Ettlingen, Germany) Optional rotaion: JASCO P-2000 Digital Polarimeter (JASCO, Tokyo, Japan) UV: Thermo UV-Visible Heλios α Spectrophotometer (Thermo Scientific, Waltham, MA, USA) CD: JASCO J-815 Spectropolarimeter (Tokyo, Japan) 4.1 Instruments for measuring physical properties HRESIMS: Q Extractive Plus Hybrid Quadrupole-Orbitrap Mass Spectrometer (Thermo Fischer Scientific, Bremen, Germany) IR: JASCO FT/IR 4100 spectrometer (Tokyo, Japan) NMR: Bruker AVIII HD 400 and AVIII-500 spectrometer (Bruker, Ettlingen, Germany) Optional rotation: JASCO P-2000 Digital Polarimeter (JASCO, Tokyo, Japan) UV: Thermo UV-Visible Heλios α Spectrophotometer (Thermo Scientific, Waltham, MA, USA) CD: JASCO J-815 Spectropolarimeter (Tokyo, Japan)
4.2 化合物1之外觀及物理數據 暗紅色粉末 [α] 25 D=+11.1 ( c0.1, MeOH) IR (ATR) V max:3382, 2927, 2861, 1622, 1591, 1460, 1231, 1061 cm -1UV (MeOH): λ max(log ε)=256 (4.51) nm, 396 (4.16) nm ECD ( c0.14 μm, MeOH) λ max(Δ ε):224 (-0.08), 277 (0.09), 371 (-0.02), 429 (0.06), 464 (0.06) 1H、 13C NMR數據:如表1 HRESIMS m/z365.1015 [H+M] +(calcd for C 21H 17O 6, 365.1025),363.0862 [H–M] –(calcd for C 21H 15O 6, 363.0869) 化學結構式: 式 (i-1)。 4.2 Appearance and physical data of compound 1: dark red powder [α] 25 D =+11.1 ( c 0.1, MeOH) IR (ATR) V max :3382, 2927, 2861, 1622, 1591, 1460, 1231, 1061 cm -1 UV (MeOH): λ max (log ε )=256 (4.51) nm, 396 (4.16) nm ECD ( c 0.14 μm, MeOH) λ max (Δ ε ):224 (-0.08), 277 (0.09), 371 (-0.02), 429 (0.06), 464 (0.06) 1 H, 13 C NMR data: as shown in Table 1 HRESIMS m/z 365.1015 [H+M] + (calcd for C 21 H 17 O 6 , 365.1025), 363.0862 [H–M] – (calcd for C 21 H 15 O 6 , 363.0869) Chemical structure: Formula (i-1).
4.3 化合物1之結構解析4.3 Structural elucidation of compound 1
化合物1為紅褐色粉末,比旋光度[α] 25 D=+11.1 ( c0.1, MeOH),紫外光譜(MeOH): λ max(log ε)=256 (4.51) nm, 396 (4.16) nm,高解析電灑游離質譜(HRESIMS)顯示其[H+M] +離子峰 m/z365.1015 (calcd for C 21H 17O 6365.1025);[H–M] –離子峰 m/z363.0862 (calcd for C 21H 15O 6363.0869)推測分子式為C 21H 16O 6。紅外光譜(IR)顯示有羥基(3382 cm -1)及共軛羰基(1622 cm -1)等官能基的存在。 Compound 1 is a reddish-brown powder with specific rotation [α] 25 D = +11.1 ( c 0.1, MeOH). UV spectra (MeOH) are λ max (log ε ) = 256 (4.51) nm, 396 (4.16) nm. High-resolution electron-scattering ionization mass spectrometry (HRESIMS) revealed a [H+M] + ion peak at m/z 365.1015 (calcd for C 21 H 17 O 6 365.1025); a [H–M] – ion peak at m/z 363.0862 (calcd for C 21 H 15 O 6 363.0869). The molecular formula is inferred to be C 21 H 16 O 6 . Infrared spectroscopy (IR) revealed the presence of functional groups such as hydroxyl groups (3382 cm -1 ) and conjugated carbonyl groups (1622 cm -1 ).
根據紫外光譜的最大吸收波長256及396 nm,推測化合物1具有多環芳烴結構。進一步參照下表1及圖1~3。化合物1之氫譜(pyridine-
d 5, 600 MHz)在δ
H3.67 (3H, s, H
3-13)為一組甲氧基(methoxy)質子訊號;在δ
H5.99 (1H, d,
J=3.6 Hz, H-7)為一組接有甲氧基之次甲基(methine)質子訊號;在δ
H5.40 (1H, t,
J=3.6 Hz, H-8)和δ
H6.20 (1H, d,
J=3.6 Hz, H-9)為兩組接氧次甲基(oxymethines)質子訊號;在δ
H7.15 (1H, d,
J=10.2 Hz, H-5)和δ
H8.83 (1H, d,
J=10.2 Hz, H-6)為雙鍵上次甲基質子訊號;在δ
H7.55 (1H, d,
J=9.0 Hz, H-2)、δ
H7.82 (1H, d,
J=9.0 Hz, H-11)、δ
H8.75 (1H, d,
J=9.0 Hz, H-12) 和δ
H9.05 (1H, d,
J=9.0 Hz, H-1)為苯環上兩組AB耦合之質子訊號。
表1:化合物1之
1H、
13C和2D NMR數據(δ in ppm,
Jin Hz)
碳譜(pyridine- d 5, 150 MHz)顯示化合物 1有21個碳,配合HSQC(圖1)的解析,含有一個甲氧基訊號位於δ C57.3 (C-13);9個次甲氧基訊號位於δ C68.6 (C-8)、68.6 (C-9)、77.8 (C-7)、119.7 (C-2)、122.5 (C-11)、124.3 (C-12)、127.7 (C-5)、133.8 (C-1)和140.2 (C-6),其中,δ C119.7 (C-2)、122.5 (C-11)、124.3 (C-12)和133.8 (C-1)為苯環上的碳;11個四級碳 (quaternary carbons)訊號位於δ C112.6 (C-3a)、120.7 (C-9a)、122.9 (C-12b)、125.6 (C-6a)、125.7 (C-3b)、126.7 (C-12a)、127.7 (C-9b)、138.8 (C-6b)、157.1 (C-10)、167.6 (C-3)和189.3 (C-4)。其中,δ C157.1 (C-10)和167.6 (C-3)為苯環上接氧的碳;δ C189.3 (C-4)為羰基(carbonyl group)碳。 Carbon spectrum (pyridine -d 5 , 150 MHz) showed that compound 1 has 21 carbon atoms. HSQC analysis (Figure 1) revealed a methoxy signal at δ C 57.3 (C-13); nine methine signals at δ C 68.6 (C-8), 68.6 (C-9), 77.8 (C-7), 119.7 (C-2), 122.5 (C-11), 124.3 (C-12), 127.7 (C-5), 133.8 (C-1), and 140.2 (C-6). Of these, δ C 119.7 (C-2), 122.5 (C-11), 124.3 (C-12), and 133.8 (C-1) are carbon atoms on the benzene ring; and 11 quaternary carbon signals are located at δ C δ C 157.1 (C-10) and 167.6 (C-3) represent the carbon atoms with oxygen attached to the benzene ring, while δ C 189.3 ( C -4) represents the carbonyl group.
根據上述氫、碳譜的初步判讀,配合COSY的相關訊號包括:H-1/H-2;H-5/H-6;H-7/H-8;H-8/H-9;H-11/H-12以及HMBC的相關訊號包括H-1/C-3、C-12a及C-3b;H-2/C-3a及C-12b;H-5/C-3a及C-6a;H-6/C-4、C-3b及C-6b;H-7/C-6a、C-9b及C-13;H-8/C-6b、C-9a及C-13;H-9/C-7、C-9b及C-10;H-11/C-9a及C-12a;H-12/C-9b、C-10及C-12b;H 3-13/C-7(表1)。透過COSY的相關訊號以及HMBC的相關訊號,可得知C-1、C-2、C-3、C-3a、C-3b及C-12b為環A上的碳,C-9a、C-9b、C-10、C-11、C-12及C-12a為環D上的碳;從H-1/C-12a和H-12/C-12b這些訊號可得知環D上的C-12a與環A的C-12b相連;從H-5/C-3a、C-6a和H-6/C-3b這些訊號搭配COSY的結果可得知C-4、C-5、C-6及C-6a與環A上的C-3a及C-3b相連形成環B;從H-8/C-6b、C-9a及H-9/C-9b這些訊號搭配COSY的結果可得知 C-6b、C-7、C-8及C-9與環D上的C-9a及C-9b相連形成環E,並從H-6/C-6b及H-7/C-6a訊號得知環E的C-6b與環B上的C-6a相連,於環A-B和環D-E之間形成C環;從H 3-13/C-7訊號可得知甲氧基接在環E上的C-7位置;從COSY訊號H-1/H-2、H-11/H-12與耦合常數 J H-1/H-2(9.0 Hz)和 J H-11/H-12(9.0 Hz)可得知這兩組氫在苯環上的相對位置皆為鄰位( ortho);C-3與C-10同樣為苯環上接羥基的碳,而C-3 (δ C167.6)較C-10 (δ C157.1)更為低場,推測與C-3羥基和C-4羰基的氫鍵有關。將上述結構解析得到的結構利用Reaxys與Scifinder n進行比對,其平面結構與過去文獻中的altertoxin IX相同,確認為苝醌(perylenequinone)衍生物。 According to the preliminary interpretation of the hydrogen and carbon spectra, the relevant signals of COSY include: H-1/H-2; H-5/H-6; H-7/H-8; H-8/H-9; H-11/H-12 and the relevant signals of HMBC include: H-1/C-3, C-12a and C-3b; H-2/C-3a and C-12b; H-5/C-3a and C-6a; H-6/C-4, C-3b and C-6b; H-7/C-6a, C-9b and C-13; H-8/C-6b, C-9a and C-13; H-9/C-7, C-9b and C-10; H-11/C-9a and C-12a; H-12/C-9b, C-10 and C-12b; H 3 -13/C-7 (Table 1). Through the relevant signals of COSY and HMBC, it can be known that C-1, C-2, C-3, C-3a, C-3b and C-12b are carbon atoms on ring A, and C-9a, C-9b, C-10, C-11, C-12 and C-12a are carbon atoms on ring D; from the signals of H-1/C-12a and H-12/C-12b, it can be known that C-12a on ring D is connected to C-12b on ring A; from the signals of H-5/C-3a, C-6a and H-6/C-3b, COSY The results of COSY show that C-4, C-5, C-6, and C-6a are connected to C-3a and C-3b on ring A to form ring B. The signals of H-8/C-6b, C-9a, and H-9/C-9b combined with the results of COSY show that C-6b, C-7, C-8, and C-9 are connected to C-9a and C-9b on ring D to form ring E. The signals of H-6/C-6b and H-7/C-6a show that C-6b of ring E is connected to C-6a on ring B to form ring C between rings A-B and D-E. The 3-13 /C-7 signal indicates that the methoxy group is attached to the C-7 position of ring E. COSY signals H-1/H-2 and H-11/H-12, as well as coupling constants J H-1/H-2 (9.0 Hz) and J H-11/H-12 (9.0 Hz), indicate that the two hydrogen atoms are ortho relative to each other on the benzene ring. C-3 and C-10 are both carbon atoms on the benzene ring that bear hydroxyl groups, but C-3 (δ C 167.6) is further downfield than C-10 (δ C 157.1), suggesting that this is related to the hydrogen bond between the C-3 hydroxyl group and the C-4 carbonyl group. The structure obtained from the above structural analysis was compared using Reaxys and Scifinder n . Its planar structure was identical to altertoxin IX in previous literature, confirming that it is a perylenequinone derivative.
從NOSEY圖譜中觀察到H-1/H-2及H-12;H-5/H-6;H-6/H-7及H-13;H-7/H-8、H-9及H-13;H-8/H-9;H-11/H-12(表1)相關訊號。透過H-1/H-12的明顯訊號可確認環A及環D位於同側;H-6/H-7的明顯訊號可確認環B及環E位於同側。由耦合常數 J H-7/H-8(3.6 Hz)及 J H-8/H-9(3.6 Hz)搭配分子模型(ChemBio3D Ultra 14.0)的建構,推測化合物1的H(7)-C(7)-C(8)-H(8)及H(8)-C(8)-C(9)-H(9)之二面角(dihedral angles)介於50~70゜,並藉由NOSEY圖譜的H-7/H-9關鍵訊號,判斷其H-7、H-8、H-9分別位於軸位(β-pseudo-axial)、赤道位(β-pseudo-equatorial)以及軸位(β-pseudo-axial),因此,化合物1的C-7-C-9相對立體為7 S*、8 R*及9 R*。 The NOSEY pattern revealed signals associated with H-1/H-2 and H-12; H-5/H-6; H-6/H-7 and H-13; H-7/H-8, H-9, and H-13; H-8/H-9; and H-11/H-12 (Table 1). The prominent signal in H-1/H-12 confirmed the ipsilateral location of loops A and D, while the prominent signal in H-6/H-7 confirmed the ipsilateral location of loops B and E. Based on the coupling constants J H-7/H-8 (3.6 Hz) and J H-8/H-9 (3.6 Hz) and the construction of a molecular model (ChemBio3D Ultra 14.0), the dihedral angles of H(7)-C(7)-C(8)-H(8) and H(8)-C(8)-C(9)-H(9) of compound 1 were inferred to be between 50° and 70°. Based on the H-7/H-9 key signal in the NOSEY spectrum, it was determined that H-7, H-8, and H-9 are located in the β-pseudo-axial, β-pseudo-equatorial, and β-pseudo-axial positions, respectively. Therefore, the C-7-C-9 relative stereoisomers of compound 1 are 7 S *, 8 R *, and 9 R *.
在絕對立體的部分,使用Gaussian 16之DFT計算方法獲得7 R, 8 S, 9 S和7 S, 8 R, 9 R兩種組態的UV與ECD圖譜(圖3),由Gaussview 6生成UV圖譜後,將8個激發態(S1-S8)分配至實驗UV與CD圖譜,並藉由比較CD圖譜中S1-S8趨勢(圖3)的方式,判斷該化合物之組態,為方便觀察CD趨勢,後續也將調整後的ECD計算結果與實驗CD圖譜進行比較(圖2)。如圖2所示,化合物1在430與460nm左右顯示正CE;在371 nm左右顯示負CE;在277nm左右顯示正CE,上述位置分別對應到圖3所示的S1、S2-S3及S5-S7,其趨勢符合7 S, 8 R, 9 R,因此確定化合物1的C-7-C-9的絕對立體為7 S, 8 R及9 R。綜合以上的結構解析,並經由Reaxys和Scifinder n資料庫文獻比對,確定化合物1為過去未曾報導之新化合物。 For the absolute isomers, Gaussian 16 DFT calculations were used to obtain UV and ECD spectra for the 7 R , 8 S , 9 S and 7 S , 8 R , 9 R configurations (Figure 3). After generating the UV spectra using Gaussview 6, the eight excited states (S1-S8) were assigned to the experimental UV and CD spectra. The configuration of the compound was determined by comparing the S1-S8 trends in the CD spectra (Figure 3). To facilitate observation of the CD trends, the adjusted ECD calculation results were subsequently compared with the experimental CD spectra (Figure 2). As shown in Figure 2, compound 1 exhibits positive CE at approximately 430 and 460 nm, negative CE at approximately 371 nm, and positive CE at approximately 277 nm. These positions correspond to S1, S2-S3, and S5-S7, respectively, as shown in Figure 3. Their trends are consistent with 7S , 8R , and 9R . Therefore, the absolute stereoisomers of compound 1's C-7-C-9 configurations are confirmed to be 7S , 8R , and 9R . Based on the above structural elucidation and comparison with literature in the Reaxys and Scifinder n databases, compound 1 is confirmed to be a previously unreported novel compound.
4.4 化合物2之外觀及物理數據 紅褐色粉末 [α] 25 D=+32.6 ( c0.1, MeOH) IR (ATR) V max:3367, 2925, 1618, 1587, 1464, 1230, 1037 cm -1UV (MeOH): λ max(log ε)=256 (4.37) nm, 398 (4.18) nm ECD ( c0.14 μm, MeOH) λ max(Δ ε):216 (-4.82), 320 (0.17), 391 (-0.95) 1H、 13C NMR數據:如表2 HRESIMS m/z369.0522 [H+M] +(calcd for C 20H 14ClO 5, 369.0530),367.0367 [H–M] –(calcd for C 20H 12ClO 5, 367.0373) 化學結構式: 式 (i-2)。 4.4 Appearance and physical data of compound 2: reddish-brown powder [α] 25 D =+32.6 ( c 0.1, MeOH) IR (ATR) V max :3367, 2925, 1618, 1587, 1464, 1230, 1037 cm -1 UV (MeOH): λ max (log ε )=256 (4.37) nm, 398 (4.18) nm ECD ( c 0.14 μm, MeOH) λ max (Δ ε ):216 (-4.82), 320 (0.17), 391 (-0.95) 1 H, 13 C NMR data: as shown in Table 2 HRESIMS m/z 369.0522 [H+M] + (calcd for C 20 H 14 ClO 5 , 369.0530), 367.0367 [H–M] – (calcd for C 20 H 12 ClO 5 , 367.0373) Chemical structure: Formula (i-2).
4.5 化合物2之結構解析
依據前述方法以及表2、圖4~6,確定化合物2為過去未曾報導之新化合物,是perylenequinone衍生物。
表2:化合物2之
1H、
13C和2D NMR數據(δ in ppm,
Jin Hz)
4.6 化合物3之外觀及物理數據 紅褐色粉末 [α] 24 D=+162.8 ( c0.1, MeOH) IR (ATR) V max:3256, 2929, 2868, 1638, 1460, 1234, 1019 cm -1UV (MeOH): λ max(log ε)=258 (4.16) nm ECD ( c0.13 μm, MeOH) λ max(Δ ε):236 (-2.99), 253 (0.44), 284 (1.38), 314 (0.88) 1H、 13C NMR數據:如表3 HRESIMS m/z389.078 [H+M] +(calcd for C 20H 18ClO 6, 389.0792),387.0629 [H–M] –(calcd for C 20H 16ClO 6, 387.0635) 化學結構式: 式 (i-3)。 4.6 Appearance and physical data of compound 3: Reddish-brown powder [α] 24 D =+162.8 ( c 0.1, MeOH) IR (ATR) V max :3256, 2929, 2868, 1638, 1460, 1234, 1019 cm -1 UV (MeOH): λ max (log ε )=258 (4.16) nm ECD ( c 0.13 μm, MeOH) λ max (Δ ε ):236 (-2.99), 253 (0.44), 284 (1.38), 314 (0.88) 1 H, 13 C NMR data: as shown in Table 3 HRESIMS m/z 389.078 [H+M] + (calcd for C 20 H 18 ClO 6 , 389.0792), 387.0629 [H–M] – (calcd for C 20 H 16 ClO 6 , 387.0635) Chemical structure: Formula (i-3).
4.7 化合物3之結構解析4.7 Structural elucidation of compound 3
依據前述方法以及表3、圖7~9,確認化合物3是perylenequinone衍生物。藉由耦合常數和分子模型 (ChemBio3D Ultra 14.0)的建構(圖10),判斷化合物3的二面角(dihedral angles)角度(表4)。H(1)-C(1)-C(12b)-H(12b)及H(6b)-C(6b)-C(7)-H(7)之二面角角度分別是173.3゜和167.1゜,搭配耦合常數
J H-1/H-12b(8.4 Hz)及
J H-6b/H-7(9.0 Hz)推測H-1-H-12b和H-6b-H-7皆為軸位-軸位(diaxial)關係,H-1、H-6b、H-7和H-12b分別位於α-pseudo-axial、β-pseudo-axial、α-pseudo-axial以及β-pseudo-axial;H(7)-C(7)-C(8)-H(8)及H(8)-C(8)-C(9)-H(9)之二面角角度分別是60.9゜和70.9゜,搭配耦合常數
J H-7H-8(3.0 Hz)、
J H-8/H-9(3.0 Hz)與NOSEY圖譜中H-7/H-9訊號的缺失,推測H-7、H-8及H-9分別位於軸位 (α-pseudo-axial)、赤道位 (α-pseudo-equatorial)以及赤道位 (β-pseudo-equatorial)。
表3:化合物3之
1H、
13C和2D NMR數據(δ in ppm,
Jin Hz)
H-6b與H-12b共有三種相對立體位向,利用分子模型 (ChemBio3D Ultra 14.0)預測其氫原子間距離,並與NOSEY訊號強度之換算距離進行比對(表5)。當H-6b和H-12b同為β form時(圖11之A的式(i-3)),H(1)-H(12)和H(6)-H(7)在空間中的距離為2.2 Å,雖然H-7/H-8距離較大,但與NOSEY計算值僅相差0.4 Å;H-6b和H-12b分別為β form與α form時(圖11之B的式(i-3-1)),H(1)-H(12)在空間中的距離增加至3.9 Å,與NOSEY計算值相差了1.7 Å;H-6b和H-12b分別為α form與β form時(圖11之C的式(i-3-2)),H(1)-H(12)和H(6)-H(7)在空間中的距離則增加至3.6~3.7 Å,與NOSEY計算值相差了1.4~1.5 Å。因此,藉由NOSEY的H-1/H-12及H-6/H-7關鍵訊號,推測H-6b和H-12b應位於同側(圖11之A)。後續將化合物3進行同核種去耦合(homonuclear decoupling)實驗,結果如圖12所示,當H-6b進行去耦合,與之互相耦合的H-7及H-12b受到去耦合的影響,分裂型態由doublet of doublets (dd)變為doublets (d);當H-12b進行去耦合,與之互相耦合的H-1及H-6b也會受影響,分裂型態由doublet of doublets of doublets (ddd)和doublet of doublets (dd)變為doublet of doublets (dd)及doublets (d),藉此可確認H-6b與H-12b為兩組長距耦合之次甲基 (
5 J H-6b/H-12b= 3.0 Hz)。化合物3長距耦合的產生推測與結構中環C的形狀有關,其環C與兩側苯環(環B和環D)相連並折起特定的角度,不僅形成類似船形的結構,也被認為同時含有雙homoallylic路徑,且H-6b和H-12b又位於pseudo-axial的位置(圖10),此種
5 J Cis的耦合常數通常較大(≧3.0 Hz)。綜合上述資訊,化合物3的C-1、C-6b、C-7、C-8、C-9及C-12b相對立體分別為
S*、
S*、
R*、
R*、
R*及
S*。
表5:化合物3之NOESY訊號與原子間距離
在絕對立體的部分,使用Gaussian 16之DFT計算方法獲得1 S, 6b S, 7 R, 8 R, 9 R, 12b S和1 R, 6b R, 7 S, 8 S, 9 S, 12b R兩種組態的UV與ECD圖譜(圖9),由Gaussview 6生成UV圖譜後,將8個激發態(S1-S8)分配至實驗UV與CD圖譜,並藉由比較CD圖譜中S1-S8(圖9)的方式,判斷該組合物之組態,為方便觀察CD趨勢,後續也將調整後的ECD計算結果與實驗CD圖譜進行比較(圖8)。由圖8觀察到化合物3在314、284、254 nm左右顯示正CE;在236 nm顯示負CE,上述位置分別對應到圖9的S2-S4和S5-S6,其趨勢符合1 S, 6b S, 7 R, 8 R, 9 R, 12b S,因此確定化合物3的C-1、C-6b、C-7、C-8、C-9和C-12b絕對立體為1 S, 6b S, 7 R, 8 R, 9 R, 12b S。綜合以上的結構解析,並經由Reaxys和Scifinder n資料庫文獻比對,確定化合物3為過去未曾報導之新化合物。 For the absolute stereoisomer, Gaussian 16 DFT calculations were used to obtain UV and ECD spectra for the two configurations: 1 S , 6b S , 7 R , 8 R , 9 R , 12b S and 1 R , 6b R , 7 S , 8 S , 9 S , 12b R (Figure 9). After generating the UV spectrum using Gaussview 6, the eight excited states (S1-S8) were assigned to the experimental UV and CD spectra. The configuration of the compound was determined by comparing the S1-S8 states in the CD spectra (Figure 9). To facilitate observation of CD trends, the adjusted ECD calculation results were subsequently compared with the experimental CD spectra (Figure 8). Figure 8 shows compound 3 exhibiting positive CE at approximately 314, 284, and 254 nm, and negative CE at 236 nm. These positions correspond to S2-S4 and S5-S6 in Figure 9, respectively, and their trends are consistent with 1S , 6bS , 7R , 8R , 9R , 12bS . Therefore, the absolute stereoisomers of compound 3, C-1, C-6b, C-7, C-8, C-9, and C-12b, are confirmed to be 1S , 6bS , 7R , 8R , 9R , 12bS . Based on the above structural elucidation and comparison with literature in the Reaxys and Scifinder n databases, compound 3 is confirmed to be a previously unreported novel compound.
4.8 化合物4之外觀及物理數據 紅褐色粉末 [α] 25 D=+108.4 ( c0.1, MeOH) IR (ATR) V max:3356, 2923, 1635, 1594, 1458, 1236, 1021 cm -1UV (MeOH): λ max(log ε)=258 (4.89), 289 (4.86), 386 (4.15) nm ECD ( c0.10 μm, MeOH) λ max(Δ ε):216 (-2.63), 317 (0.13), 396 (-0.17) 1H、 13C NMR數據:如表6 HRESIMS m/z507.0508 [H–M] –(calcd for C 23H 20ClO 9S, 507.0517) 化學結構式: 式 (i-4)。 4.8 Appearance and physical data of compound 4 Reddish brown powder [α] 25 D =+108.4 ( c 0.1, MeOH) IR (ATR) V max :3356, 2923, 1635, 1594, 1458, 1236, 1021 cm -1 UV (MeOH): λ max (log ε )=258 (4.89), 289 (4.86), 386 (4.15) nm ECD ( c 0.10 μm, MeOH) λ max (Δ ε ):216 (-2.63), 317 (0.13), 396 (-0.17) 1 H, 13 C NMR data: as shown in Table 6 HRESIMS m/z 507.0508 [H–M] – (calcd for C 23 H 20 ClO 9 S, 507.0517) Chemical structure: Formula (i-4).
4.9 化合物4之結構解析4.9 Structural Elucidation of Compound 4
依據前述方法以及表6、圖13~15,確認化合物4是perylenequinone衍生物。藉由耦合常數和分子模型 (ChemBio3D Ultra 14.0)的建構(圖16),判斷化合物4的二面角(dihedral angles)角度(表7)。由耦合常數
J Ha-5/H-6(3.6 Hz)及
J Hb-5/H-6(3.6 Hz)搭配H
a(5)-C(5)-C(6)-H(6)及H
b(5)-C(5)-C(6)-H(6)之二面角角度(52.3~64.3゜),推測H-6與6a-OH分別位於赤道位(β-pseudo-equatorial)及軸位(β-pseudo-axial);耦合常數
J H-6b/H-7(3.6 Hz)及NOSEY圖譜H-7/H-13的明顯訊號推測H-6b與H-7分別位於軸位(α-pseudo-axial)及赤道位(α-pseudo-equatorial);耦合常數
J H-7/H-8(3.6 Hz)及
J H-8/H-9(3.6 Hz)推測H(7)-C(7)-C(8)-H(8)與H(8)-C(8)-C(9)-H(9)之二面角角度較小(44.7~58.0゜),且NOSEY圖譜中未觀察到H-6b/H-8和H-7/H-9的訊號,因此H-8及H-9分別位於赤道位(β-pseudo-equatorial)以及軸位(β-pseudo-axial)。綜合上述資訊搭配分子模型(ChemBio3D Ultra 14.0)的建構(圖16),化合物4的C-6、C-6a、C-6b、C-7、C-8及C-9相對立體確認為
S*、
S*、
S*、
R*、
R*及
R*,然而C-14的相對立體無法由以上方式確認。
表6:化合物4之
1H、
13C和2D NMR數據(δ in ppm,
Jin Hz)
在絕對立體的部分,使用Gaussian 16之DFT計算方法獲得6 S, 6a S, 6b S, 7R, 8 R, 9 R, 14 S、6 S, 6a S, 6b S, 7 R, 8 R, 9 R, 14 R 、6 R, 6a R, 6b R, 7 S, 8 S, 9 S, 14 S和6 R, 6a R, 6b R, 7 S, 8 S, 9 S, 14 R四種組態的UV與CD圖譜(圖15),由Gaussview 6生成UV圖譜後,將8個激發態(S1-S8)分配至實驗UV與CD圖譜,並藉由比較CD圖譜中S1-S8趨勢(圖15)的方式,判斷該化合物之組態,為方便觀察CD趨勢,後續也將調整後的ECD計算結果與實驗CD圖譜進行比較(圖14)。由圖14觀察到化合物4在396 nm左右顯示負CE;在317nm左右顯示正CE;在216nm顯示明顯的負CE,上述位置分別對應到圖15的S2、S3和S4,其趨勢同時符合6 S, 6a S, 6b S, 7R, 8 R, 9 R, 14 S和6 S, 6a S, 6b S, 7 R, 8 R, 9 R, 14 R,因此僅能確定化合物4的C-6、C-6a、C-6b、C-7、C-8和C-9絕對立體為6 S, 6a S, 6b S, 7R, 8 R及9 R,C-14的絕對立體仍無法確認。將所得結構與Reaxys和Scifinder n資料庫文獻比對,確定化合物4為過去未曾報導之新化合物。 In the absolute stereo section, the DFT calculation method of Gaussian 16 was used to obtain the UV and CD spectra of four configurations: 6 S , 6a S , 6b S , 7R , 8 R , 9 R , 14 S , 6 S , 6a S , 6b S , 7 R , 8 R , 9 R , 14 R , 6 R , 6a R , 6b R , 7 S , 8 S , 9 S , 14 S and 6 R , 6a R , 6b R , 7 S , 8 S , 9 S , 14 R (Figure 15). After generating the UV spectrum, the eight excited states (S1-S8) were assigned to the experimental UV and CD spectra. The configuration of the compound was determined by comparing the S1-S8 trends in the CD spectrum (Figure 15). To facilitate observation of the CD trend, the adjusted ECD calculation results were subsequently compared with the experimental CD spectrum (Figure 14). Figure 14 shows that compound 4 exhibits negative CE around 396 nm, positive CE around 317 nm, and a distinct negative CE at 216 nm. These positions correspond to S2, S3, and S4 in Figure 15 , respectively. Their trends are consistent with both 6 S , 6a S , 6b S , 7R , 8 R , 9 R , 14 S and 6 S , 6a S , 6b S , 7 R , 8 R , 9 R , 14 R. Therefore, only the absolute isomers of C-6, C-6a, C-6b, C-7, C-8, and C-9 of compound 4 can be confirmed as 6 S , 6a S , 6b S, 7R , 8 R , and 9 R ; the absolute isomer of C-14 remains unidentified. The obtained structure was compared with the literature in the Reaxys and Scifinder n databases, confirming that compound 4 was a new compound that had not been reported before.
本發明之化合物的製備方法,除實施例1的植物及真菌外,亦可採用其他植物、真菌以培養、分離、純化而得本發明之化合物,其中培養、分離、純化之方式也不限於實施例1之例示。醱酵液萃取及萃取物之分離與純化也不限於實施例2、3之例示。此外化合物1~4還可以本文所例示之方法外的其他方法製備而得,包含以化學合成方式製備而得。只要所製得的化合物具有如前述之結構及物理性質,都屬於本發明的範疇。實施例4之測定方法及解析步驟僅為例示,本發明不以其為限。In addition to the plants and fungi of Example 1, the preparation methods of the compounds of the present invention can also use other plants and fungi to cultivate, isolate, and purify to obtain the compounds of the present invention. The cultivation, isolation, and purification methods are not limited to those exemplified in Example 1. Fermentation broth extraction and the separation and purification of the extract are also not limited to those exemplified in Examples 2 and 3. In addition, compounds 1-4 can also be prepared by methods other than those exemplified herein, including chemical synthesis. As long as the obtained compounds have the structure and physical properties as described above, they are within the scope of the present invention. The determination method and analytical steps of Example 4 are merely illustrative and the present invention is not limited thereto.
四、本發明之化合物的活性評估IV. Activity Evaluation of the Compounds of the Present Invention
本發明之化合物的活性評估實施例Activity Evaluation Examples of the Compounds of the Present Invention
實施例5:化合物活性評估Example 5: Activity Evaluation of Compounds
5.1 化合物的抗病毒活性
透過分析EBV之溶裂蛋白質Rta、Zta和EA-D的表現,評估真菌之二次代謝物中的化合物對細胞株的EBV的抑制作用。
5.1.1 實驗材料:
含有EBV的P3HR1細胞株。
5.1.2 實驗方法
5.1.2.1 細胞處理(1):將P3HR1細胞以6×10
5cell/mL的濃度培養於37℃、5%CO
2中,培養24小時後分別加入化合物1~4,並使化合物最終濃度為10 μM。接著,於1小時後加入SB (sodium butyrate)誘導細胞進入溶裂循環。24小時後收集細胞並以lysis buffer溶解細胞,離心取得蛋白質上清液,用以進行西方墨點法。
5.1.2.2 細胞處理(2):將P3HR1細胞培養於37℃、5%CO
2中。24小時後分別加入不同濃度的化合物1~4,並放置24小時。接著進行MTT測試。
5.1.2.2 西方墨點法:取得蛋白質上清液後,以西方墨點法分析EBV溶裂蛋白質Rta、Zta和EA-D的表現(圖17),並使用影像分析軟體(ImageJ)掃描影像強度進行數據分析,將β-tublin與Rta、Zta及EA-D之相對表現量進行換算,並依據Rta之表現量推算化合物1~4的半效應濃度(EC
50),如表8。
5.1.2.3 MTT測試:以MTT檢測化合物1~4於不同濃度下對P3HR1細胞存活率之影響,並計算出50%細胞毒性濃度(CC
50),如表8所列。
5.1.3 實驗結果
表8:化合物1~4之半效應濃度、50%細胞毒性濃度及選擇指數
5.2 化合物的抗發炎活性
透過分析一氧化氮濃度,評估由真菌之二次代謝物中的化合物對細胞株產生NO的抑制作用。
5.2.1 實驗材料:
小鼠小膠質細胞株(murine microglial cell line, BV-2)
5.2.2 實驗方法
5.2.2.1 細胞處理:將BV-2細胞培養在含有10%FBS和L-glutamine、penicillin、streptomycin、HEPES及NaHCO
3的DMEM培養液中,培養在37℃、5%CO
2及95%潮濕空氣中。
5.2.2.2 Griess reagent assay:將BV-2細胞定量好(5×10
5cells/well)分置於24 well培養盤中,於恆溫培養箱中培養24小時後,移除培養液,加入不含酚紅的DMEM新培養液,再加入溶於DMSO中的樣品包含:空白對照組(0.1% dimethyl sulfoxide)與化合物1~4 (10 μM),30分鐘後給予脂多醣(lipopolysaccharide, LPS) 150 ng/mL反應24小時。取出細胞培養液之上清液,再加入同體積的Griess reagent (1% sulfanilamide和0.1% naphthylethylenediamine)於室溫下反應10分鐘,利用ELISA reader於螢光波長550 nm下,偵測其吸光強度(O.D.),並計算化合物對於BV-2細胞產生NO的抑制強度,結果如圖18所示。
5.2.2.3 MTT測試:將化合物1~4加入含有BV-2細胞的96孔盤中,放置24小時,之後移除上清液,加入含有MTT的DMEM培養液,置於37℃、5%CO
2及95%潮濕空氣中培養1小時,利用ELISA reader以螢光波長550 nm測定其吸光值,並計算化合物1~4對於BV-2細胞是否具有細胞毒殺作用。結果如圖19所示。
5.2.2.4 化合物1~4的半抑制濃度(IC
50):依據圖18的結果,以薑黃素(curcumin,圖18中 “R”)作為對照組,進行化合物1~4的半抑制濃度(IC
50)的計算,結果如表9。
5.1.3 實驗結果
表9:化合物1~4及薑黃素之半抑制濃度
綜上,本發明提供一種式(I)所示的苝醌(perylenequinone)類化合物,並提供式(I)所示化合物的製備方法。在應用上,本發明之式(I)化合物具有抗病毒活性及抗發炎活性。就前者來說,本發明之式(I)化合物特別對於人類疱疹病毒(Epstein-Barr virus, EBV)具有抗病毒活性。人類疱疹病毒在人口中的感染率高,且其還會引發傳染性白血球增多症,同時也被認為與淋巴增生病變、頭頸癌、乳腺癌、系統性紅斑性狼瘡、維他命D缺乏症、慢性疲勞症候群、甲狀腺疾病、類風濕性關節炎、多發性硬化及其他自體免疫性疾病有關。因此,式(I)所示之化合物的開發具備良好前景。In summary, the present invention provides a perylenequinone compound represented by formula (I) and a method for preparing the compound represented by formula (I). In applications, the compound represented by formula (I) of the present invention exhibits antiviral and anti-inflammatory activity. Regarding the former, the compound represented by formula (I) of the present invention exhibits particular antiviral activity against the human herpes virus (Epstein-Barr virus, EBV). Human herpes virus has a high infection rate in the human population and can also cause infectious leukocytosis. It is also believed to be associated with lymphoproliferative diseases, head and neck cancer, breast cancer, systemic lupus erythematosus, vitamin D deficiency, chronic fatigue syndrome, thyroid disease, rheumatoid arthritis, multiple sclerosis, and other autoimmune diseases. Therefore, the development of the compound represented by formula (I) holds great promise.
雖然本發明已以實施例揭露如上,然其並非用以限定本發明,本發明所屬技術領域中具有通常知識者,在不脫離本發明之精神和範圍內,當可作些許之更動與潤飾,因此本發明之保護範圍當視後附之申請專利範圍所界定者為準。Although the present invention has been disclosed above by way of embodiments, they are not intended to limit the present invention. Those skilled in the art may make modifications and improvements without departing from the spirit and scope of the present invention. Therefore, the scope of protection of the present invention shall be determined by the scope of the attached patent application.
無without
圖1所示為化合物1之HSQC圖譜。 圖2所示為化合物1之CD光譜與計算ECD光譜圖。 圖3所示為化合物1之UV與CD圖譜的激發態位置。 圖4所示為化合物2之HSQC圖譜。 圖5所示為化合物2之CD光譜與計算ECD光譜圖。 圖6所示為化合物2之UV與CD圖譜的激發態位置。 圖7所示為化合物3之HSQC圖譜。 圖8所示為化合物3之CD光譜與計算ECD光譜圖。 圖9所示為化合物3之UV與CD圖譜的激發態位置。 圖10所示為化合物3之分子模型 (ChemBio3D Ultra 14.0)。 圖11所示為化合物3之不同立體組態。 圖12所示為化合物3之同核種去耦合實驗圖譜(pyridine- d 5, 600MHz)。 圖13所示為化合物4之HSQC圖譜。 圖14所示為化合物4之CD光譜與計算ECD光譜圖。 圖15所示為化合物4之UV與CD圖譜的激發態位置。 圖16所示為化合物4之分子模型 (ChemBio3D Ultra 14.0)。 圖17所示為化合物1~4對Rta與tublin表現之影響。 圖18所示為化合物1~4對LPS刺激NO生成之影響。 圖19所示為化合物1~4對BV-2細胞存活率之影響。 Figure 1 shows the HSQC spectrum of compound 1. Figure 2 shows the CD spectrum and calculated ECD spectrum of compound 1. Figure 3 shows the excited state positions of the UV and CD spectra of compound 1. Figure 4 shows the HSQC spectrum of compound 2. Figure 5 shows the CD spectrum and calculated ECD spectrum of compound 2. Figure 6 shows the excited state positions of the UV and CD spectra of compound 2. Figure 7 shows the HSQC spectrum of compound 3. Figure 8 shows the CD spectrum and calculated ECD spectrum of compound 3. Figure 9 shows the excited state positions of the UV and CD spectra of compound 3. Figure 10 shows the molecular model of compound 3 (ChemBio3D Ultra 14.0). Figure 11 shows different stereoconfigurations of compound 3. Figure 12 shows the homonuclear decoupling spectrum of compound 3 (pyridine- d 5 , 600 MHz). Figure 13 shows the HSQC spectrum of compound 4. Figure 14 shows the CD spectrum and calculated ECD spectrum of compound 4. Figure 15 shows the excited state positions of UV and CD spectra of compound 4. Figure 16 shows the molecular model of compound 4 (ChemBio3D Ultra 14.0). Figure 17 shows the effects of compounds 1-4 on Rta and tublin expression. Figure 18 shows the effects of compounds 1-4 on LPS-stimulated NO production. Figure 19 shows the effects of compounds 1-4 on BV-2 cell viability.
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| WO1998033470A2 (en) * | 1997-01-10 | 1998-08-06 | Altarex Corp. | Substituted perylenequinones for use in photodynamic therapy |
| JP2009505968A (en) * | 2005-08-10 | 2009-02-12 | クウェスト・ファーマテック・インコーポレイテッド | Perylenequinone derivatives and uses thereof |
| CN106727456B (en) * | 2016-12-01 | 2019-04-09 | 浙江工业大学 | Application of a kind of chloroperylene quinone in the preparation of antibacterial agent or antitumor drug |
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| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1998033470A2 (en) * | 1997-01-10 | 1998-08-06 | Altarex Corp. | Substituted perylenequinones for use in photodynamic therapy |
| JP2009505968A (en) * | 2005-08-10 | 2009-02-12 | クウェスト・ファーマテック・インコーポレイテッド | Perylenequinone derivatives and uses thereof |
| CN106727456B (en) * | 2016-12-01 | 2019-04-09 | 浙江工业大学 | Application of a kind of chloroperylene quinone in the preparation of antibacterial agent or antitumor drug |
Non-Patent Citations (1)
| Title |
|---|
| 網路文獻 Carol A. Mulrooey, Erin M. O'Brien, Barbara J. Morgan, Marisa C. Kozlowski. Perylenequinones: Isolation, Synthesis, and Biological Activity European J Org Chem. 2012 July 1; 2012(21): 3887–3904. 2012年07月01日 :10.1002/ejoc.201200184 * |
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