TWI880485B - Digital slide microscopic scanning apparatus and method for microscopic scanning of slides - Google Patents
Digital slide microscopic scanning apparatus and method for microscopic scanning of slides Download PDFInfo
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本發明涉及一種生物組織細胞檢測用玻片的掃描領域;特別是指一種數位式玻片顯微掃描機及玻片顯微掃描方法。 The present invention relates to the field of scanning of slides for biological tissue cell detection; in particular, it refers to a digital slide microscanner and a slide microscanning method.
對包括人類在內的生物的微細組織進行採樣,採樣所得的樣本保存設置在玻片,數位式玻片掃描機應用在顯微掃描該玻片,取得該樣本的影像,並將該影像轉換為數位檔以數位形式保存,該影像可用於判斷被採樣對象的生物組織。 The microscopic tissues of organisms including humans are sampled and stored on a slide. A digital slide scanner is used to microscopically scan the slide to obtain an image of the sample, and the image is converted into a digital file and stored in digital form. The image can be used to determine the biological tissue of the sampled object.
數位式玻片掃描機依據樣本的需要,選擇以20倍或40倍的高倍率,全景式顯微掃描該玻片取得該影像,取得影像所需耗費的時間長,該影像的像素數量高,轉換為數位檔所需的時間長,轉換所得數位檔的資料量大,不利於在短時間內顯微掃描大量的玻片,也不利於該數位檔的複製及傳輸,且大量的資料量大的該數位檔易造成相關儲存設備的負擔。 The digital slide scanner selects a high magnification of 20x or 40x to obtain the image by panoramic microscopy at the slide according to the needs of the sample. It takes a long time to obtain the image, and the image has a high number of pixels, so it takes a long time to convert it into a digital file. The converted digital file has a large amount of data, which is not conducive to microscanning a large number of slides in a short time, nor is it conducive to copying and transmitting the digital file. In addition, the large amount of data in the digital file is likely to cause a burden on the relevant storage equipment.
本發明之主要目的,在於提供一種數位式玻片顯微掃描機及玻片顯微掃描方法。 The main purpose of the present invention is to provide a digital slide microscanner and a slide microscanning method.
為達到前述目的,本發明採用以下技術方案:一種數位式玻片顯微掃描機,包括一樣本庫、一移載裝置及一掃描裝置,其中:該樣本庫係用於設置多個玻片的儲存設備,各該玻片分別可供承載生物微細組織的樣本;該移載裝置包括一機械臂總成及一夾持器,其中該機械臂總成的一側面向著該樣本庫,該夾持器設於該機械臂總成面向該樣本庫的方向側,該機械臂總成掣動該夾持器,據使該夾持器自該樣本庫取出或置入選定的該玻片,並於該樣本庫及該掃描裝置之間移載該玻片;該掃描裝置設於該機械臂總成的一側,包括一載台、一設置座、一電動機、一第一相機、一第二相機及一處理單元,其中該載台承載並定位該玻片,該第一相機、該第二相機及該電動機分別電性連接該處理單元,該第一相機及該第二相機分別設於該設置座面向該載台的一側,據使該第一相機及該第二相機分別掃描該玻片,並向該處理單元傳送掃描所得影像;該電動機驅動該設置座,變換選擇該第一相機或該第二相機掃描該玻片;該第一相機以第一倍率全片幅掃描該玻片,取得該樣本的第一顯微影像,該第二相機以第二倍率掃描該玻片的選定的目標區域,取得該樣本的第二顯微影像,據此對該處理單元傳送該第一顯微影像及該第二顯微影像;該第一倍率小於該第二倍率;該處理單元主要由至少具有一微處理器的電子電路構成,該微處理器運行影像辨識軟體,基於該第一顯微影像,決定該 第二相機掃描該玻片的該目標區域,並分別轉換該第一顯微影像及該第二顯微影像為數位形式的第一數位檔及第二數位檔。 To achieve the above-mentioned purpose, the present invention adopts the following technical scheme: a digital slide microscope scanner, including a sample library, a transfer device and a scanning device, wherein: the sample library is a storage device for arranging a plurality of slides, each of which can be used to carry a sample of biological micro-tissue; the transfer device includes a mechanical arm assembly and a clamp, wherein one side of the mechanical arm assembly faces the sample library, and the clamp is arranged on the side of the mechanical arm assembly facing the sample library. The robot assembly drives the gripper to take out or put in the selected glass slide from the sample library, and transfer the glass slide between the sample library and the scanning device; the scanning device is arranged on one side of the robot assembly, and includes a carrier, a mounting seat, a motor, a first camera, a second camera and a processing unit, wherein the carrier carries and positions the glass slide, the first camera, the second camera and the motor are electrically connected to the processing unit respectively, and the first camera The first camera and the second camera are respectively arranged on a side of the setting seat facing the stage, and the first camera and the second camera are respectively used to scan the glass slide and transmit the scanned images to the processing unit; the motor drives the setting seat to switch between the first camera and the second camera to scan the glass slide; the first camera scans the glass slide with a first magnification and a full frame to obtain a first microscopic image of the sample, and the second camera scans a selected target area of the glass slide with a second magnification to obtain a first microscopic image of the sample. The first microscopic image is a second microscopic image, and the first microscopic image and the second microscopic image are transmitted to the processing unit accordingly; the first magnification is less than the second magnification; the processing unit is mainly composed of an electronic circuit having at least one microprocessor, and the microprocessor runs image recognition software, and based on the first microscopic image, determines that the second camera scans the target area of the glass slide, and converts the first microscopic image and the second microscopic image into a first digital file and a second digital file in digital form respectively.
一種玻片顯微掃描方法,其係使用如前所述數位式玻片顯微掃描機執行者;其包括依序執行的以下步驟:玻片定位:該移載裝置自該樣本庫選取具有該樣本的該玻片,並將該玻片移載至該載台;全片幅掃描:該第一相機以該第一倍率全片幅掃描該玻片,取得該樣本的該第一顯微影像;辨識該第一顯微影像及標定該目標區域:該微處理器運行該影像辨識軟體辨識該第一顯微影像,基於辨識所得標定該樣本的細胞或組織的至少一個分布區域作為該目標區域,並轉換該第一顯微影像為該第一數位檔;區域掃描:該處理單元控制該電動機,該設置座作動使該第二相機以該第二倍率掃描該玻片的該目標區域,取得該樣本的該第二顯微影像,該處理單元運行該影像辨識軟體辨識該第二顯微影像,並轉換該第二顯微影像為該第二數位檔;玻片復歸:該移載裝置將掃描完成的該玻片置入該樣本庫。 A glass slide microscanning method is performed by using the digital glass slide microscanner as described above; the method comprises the following steps performed in sequence: glass slide positioning: the transfer device selects the glass slide with the sample from the sample library and transfers the glass slide to the stage; full-frame scanning: the first camera scans the glass slide with the first magnification and full-frame to obtain the first microscopic image of the sample; identifying the first microscopic image and marking the target area: the microprocessor runs the image recognition software to identify the first microscopic image and marks the target area based on the mark obtained by the recognition; At least one distribution area of cells or tissues of the sample is determined as the target area, and the first microscopic image is converted into the first digital file; regional scanning: the processing unit controls the motor, the setting seat is actuated to make the second camera scan the target area of the glass slide at the second magnification, and obtain the second microscopic image of the sample, the processing unit runs the image recognition software to recognize the second microscopic image, and converts the second microscopic image into the second digital file; glass slide return: the transfer device places the scanned glass slide into the sample library.
本發明之主要效果與優點,係能夠以較低的該第一倍率快速地執行全片幅掃描,再以較高的該第二倍率掃描該目標區域,取得影像所需時間得以降低,取得該第一數位檔及該第二數位檔所需的時間短,該第一數位檔及該第二數位檔的資料量小於先前技術,有利於在短時間內顯微掃描大量的該玻片,也有利於該第一數位檔及該第二數位檔的複製及傳輸。 The main effect and advantage of the present invention is that it can quickly perform full-frame scanning at a lower first magnification, and then scan the target area at a higher second magnification, so that the time required to obtain the image can be reduced, the time required to obtain the first digital file and the second digital file is short, and the data volume of the first digital file and the second digital file is smaller than that of the previous technology, which is conducive to microscopic scanning of a large number of slides in a short time, and is also conducive to the copying and transmission of the first digital file and the second digital file.
10:樣本庫 10: Sample library
12:空間 12: Space
20:移載裝置 20:Transfer device
22:機械臂總成 22: Robotic arm assembly
24:夾持器 24: Clamp
30:掃描裝置 30: Scanning device
31:載台 31: Carrier
32:設置座 32: Setting seat
33:電動機 33: Electric motor
34:第一相機 34: First Camera
35:第二相機 35: Second camera
36:處理單元 36: Processing unit
362:微處理器 362: Microprocessor
37:線性滑軌 37: Linear slide rail
38:第三相機 38: Third Camera
40:影像儲存庫 40: Image storage
90:玻片 90: Glass slide
92:樣本 92: Sample
94:目標區域 94: Target area
圖1係本發明較佳實施例一之數位式玻片顯微掃描機的立體圖。 Figure 1 is a three-dimensional diagram of the digital slide microscope scanner of the first preferred embodiment of the present invention.
圖2係本發明較佳實施例一之數位式玻片顯微掃描機的部分立體圖,顯示一部分的移載裝置。 Figure 2 is a partial three-dimensional diagram of the digital slide microscope scanner of the preferred embodiment 1 of the present invention, showing a portion of the transfer device.
圖3係本發明較佳實施例一之數位式玻片顯微掃描機的部分前視圖,顯示一部分的掃描裝置。 Figure 3 is a partial front view of the digital slide microscope scanner of the preferred embodiment 1 of the present invention, showing a portion of the scanning device.
圖4係本發明較佳實施例一之掃描裝置的部分立體圖。 Figure 4 is a partial three-dimensional diagram of the scanning device of the first preferred embodiment of the present invention.
圖5係本發明較佳實施例一之掃描裝置的電路方塊圖。 Figure 5 is a circuit block diagram of the scanning device of the first preferred embodiment of the present invention.
圖6係全片幅掃描玻片的示意圖。 Figure 6 is a schematic diagram of a full-frame scan slide.
圖7係玻片選定目標區域的平面示意圖。 Figure 7 is a plan view of the target area selected on the slide.
圖8係本發明較佳實施例一之玻片顯微掃描方法的流程圖。 Figure 8 is a flow chart of the slide microscanning method of the first preferred embodiment of the present invention.
圖9係本發明另一實施例之掃描裝置的部分右側視圖。 Figure 9 is a partial right side view of a scanning device of another embodiment of the present invention.
圖式所示係本發明之實施例,惟此等實施例僅供說明使用,在專利申請上並不受此實施例之限制。 The figures show embodiments of the present invention, but these embodiments are for illustrative purposes only and are not limited to these embodiments in patent applications.
如圖1至圖7所示,數位式玻片顯微掃描機,包括一樣本庫10、一移載裝置20及一掃描裝置30,其中該樣本庫10係用於設置多個玻片90的儲存設備,各該玻片90分別可供承載生物微細組織的樣本92,具體而言,該樣本庫10區隔形成多個空間12,且各該空間12選擇以平行並列形式由上而下配置,各該玻片90彼此平行地沿著豎直方向依序間隔排列設置在各該空間12,能夠提高多個該玻片90儲存的空間效益。
As shown in Figures 1 to 7, the digital slide microscope scanner includes a
該移載裝置20包括一機械臂總成22及一夾持器24,其中該機械臂總成22的一側面向著該樣本庫10,該夾持器24設於該機械臂總成22面向該樣本庫10的方向側,該機械臂總成22掣動該夾持器24,據使該夾持器24自該樣本庫10取出或置入選定的該玻片90,並於該樣本庫10及該掃描裝置30之間移載該玻片90。
The
該掃描裝置30設於該機械臂總成22的一側,包括一載台31、一設置座32、一電動機33、一第一相機34、一第二相機35及一處理單元36,其中該載台31承載並定位該玻片90,該設置座32與該載台31用於承載該玻片90的一側相對,該第一相機34及該第二相機35分別設於該設置座32面向該載台31的一側,該第一相機34及該第二相機35分別電性連接該處理單元36,據使該第一相機34及第二相機35分別掃描該玻片90,並向該處理單元36傳送掃描所得影像。
The
該第一相機34及該第二相機35分別為本發明所屬領域人士所熟習的既有組件,恕不詳述該第一相機34及該第二相機35的具體構成。
The
該電動機33電性連接該處理單元36,該電動機33驅動該設置座32變換選擇該第一相機34或該第二相機35掃描該玻片90。
The
該第一相機34以第一倍率全片幅掃描該玻片90,取得該樣本92的第一顯微影像,該第二相機35以第二倍率掃描該玻片90的選定的目標區域94,取得該樣本92的第二顯微影像,據此對該處理單元36傳送該第一顯微影像及該第二顯微影像,該第一倍率小於該第二倍率;本例中,該第一倍率選擇為4倍倍率,該第二倍率選擇為20倍倍率。
The
該處理單元36由至少具有一微處理器362的電子電路
構成,該微處理器362運行影像辨識軟體,該第一相機34及該第二相機35分別電性連接該微處理器362,基於該第一顯微影像決定該第二相機35掃描該玻片90的該目標區域94,並分別轉換該第一顯微影像及該第二顯微影像為數位形式的第一數位檔及第二數位檔。
The
如圖8所示,使用前述數位式玻片顯微掃描機執行的玻片顯微掃描方法,包括依序執行的以下步驟:玻片定位:該移載裝置20自該樣本庫10選取具有該樣本92的該玻片90,並將該玻片90移載至該載台31。
As shown in FIG8 , the slide microscanning method performed using the aforementioned digital slide microscanner includes the following steps performed in sequence: Slide positioning: The
全片幅掃描:該第一相機34以該第一倍率全片幅掃描該玻片90,取得該樣本92的該第一顯微影像;該第一相機34執行全片幅掃描前,該處理單元36可視需要驅動該第一相機34,使該第一相機34得以對焦。
Full-frame scanning: The
辨識該第一顯微影像及標定該目標區域:該微處理器362運行該影像辨識軟體辨識該第一顯微影像,基於辨識所得標定該樣本92的細胞或組織的至少一個分布區域作為該目標區域94,並轉換該第一顯微影像為該第一數位檔。
Identify the first microscopic image and mark the target area: The
區域掃描:該處理單元36控制該電動機33,該電動機33驅動該設置座32作動,使該第二相機35面向著該玻片90,該第二相機35以該第二倍率掃描該玻片90的該目標區域94,取得該樣本92的該第二顯微影像,該微處理器362運行該影像辨識軟體辨識該第二顯微影像,並轉換該第二顯微影像為該第二數位檔。
Area scanning: The
玻片復歸:該移載裝置20將掃描完成的該玻片90置入該樣本庫10。
Slide return: The
該第一數位檔及該第二數位檔可選擇通過傳輸網路向 遠端的資料儲存設備或可解譯的遠端設備傳送,據使遠端設備解譯該第一數位檔或該第二數位檔,並呈現對應的該第一顯微影像或該第二顯微影像,提供相關的醫事人員或研究人員判讀該第一顯微影像或該第二顯微影像。 The first digital file and the second digital file can be selectively transmitted to a remote data storage device or an interpretable remote device through a transmission network, so that the remote device interprets the first digital file or the second digital file and presents the corresponding first microscopic image or the second microscopic image, providing relevant medical personnel or researchers with the opportunity to interpret the first microscopic image or the second microscopic image.
該第一相機34以較低的該第一倍率全片幅掃描該樣本92,決定該目標區域94後,該第二相機35再以較高的該第二倍率掃描以確認的該目標區域94,不掃描該目標區域94以外的部分,獲得可供醫事人員或研究人員判讀的該第二顯微影像,由該第二顯微影像轉換所得的該第二數位檔的資料量,明顯遠低於先前技術以相同的該第二倍率全片幅掃描所得的數位檔案,相較於先前技術而言,縱然本發明需要產出以該第一顯微影像轉換而得的該第一數位檔,但是該第一數位檔及該第二數位檔的資料量合計遠遠低於先前技術掃描所得的該數位檔案,對於醫事人員或研究人員而言主要判讀的對象是該第二數位檔,通常在少數的場合需要檢視該第一數位檔。
The
較佳實施例以較低的該第一倍率快速地執行全片幅掃描,再以較高的該第二倍率掃描該目標區域94,整體掃描取得影像所需時間相較於先前技術得以降低,所取得該第一顯微影像及該第二顯微影像的像素數量低,轉換為該第一數位檔及該第二數位檔所需的時間低於先前技術,轉換所得該第一數位檔及該第二數位檔的資料量小於先前技術,有利於在短時間內顯微掃描大量的該玻片90,也有利於該第一數位檔及該第二數位檔的複製及傳輸。
The preferred embodiment quickly performs full-frame scanning at the lower first magnification, and then scans the
該設置座32選擇連接二線性滑軌37,該電動機33通過各該線性滑軌37驅動該設置座32,據使該設置座32直線往復運動,該第一相機34及該第二相機35沿著該設置座32往復運動的方向間隔
配置。
The mounting
該掃描裝置30更包括一第三相機38,該第三相機38設於該設置座32面向該載台31的方向側,該第三相機38電性連接該微處理器362。
The
基於該第三相機38的配置,所述的玻片顯微掃描方法,更包括一高倍率掃描步驟,其中該區域掃描步驟執行完成後,基於該第二顯微影像顯示的內容,視需要執行該高倍率掃描步驟,再執行該玻片復歸步驟;選擇執行該高倍率掃描步驟的時機,可以是在該處理單元36判斷該第二顯微影像需要更高解析進一步分析時,其主要原因可能是該第二顯微影像顯現的細胞或核特徵較小。
Based on the configuration of the
該高倍率掃描步驟中,該處理單元36控制該電動機33使該設置座32作動,該第三相機38以第三倍率掃描該目標區域94,取得該樣本92的第三顯微影像,該微處理器362運行該影像辨識軟體辨識該第三顯微影像,並轉換該第三顯微影像為第三數位檔,該第三倍率高於該第二倍率;該第三倍率係選擇為40倍倍率。
In the high-magnification scanning step, the
該第一相機34、該第二相機35及該第三相機38沿著該設置座32往復運動的方向間隔配置,且該第二相機35位於該第一相機34及該第三相機38之間。
The
所述之數位式玻片顯微掃描機,更包括一影像儲存庫40,該影像儲存庫40主要由可讀寫的記憶媒體構成,用於儲存該第一數位檔、該第二數位檔及該第三數位檔,該影像儲存庫40電性連接該處理單元36,據使該處理單元36對該影像儲存庫40傳送該第一數位檔、該第二數位檔及該第三數位檔。
The digital slide microscope scanner further includes an
如圖9所示,本發明另一實施例主要不同於較佳實施
例的構成在於,該設置座32受該電動機33驅動旋轉,該第一相機34、該第二相機35及該第三相機38係呈環狀間隔配置在該設置座32面向該載台31的方向側。
As shown in FIG. 9 , another embodiment of the present invention is mainly different from the preferred embodiment in that the mounting
30:掃描裝置 30: Scanning device
31:載台 31: Carrier
32:設置座 32: Setting seat
33:電動機 33: Electric motor
34:第一相機 34: First Camera
35:第二相機 35: Second camera
38:第三相機 38: Third Camera
90:玻片 90: Glass slide
Claims (8)
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