TW202405170A - Composition and method for inhibiting expression of complement component C3 protein - Google Patents
Composition and method for inhibiting expression of complement component C3 protein Download PDFInfo
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Abstract
Description
本發明的部分實施方案關於可用於抑制補體成分C3蛋白表達的組合物和方法。Some embodiments of the present invention relate to compositions and methods useful for inhibiting expression of complement component C3 protein.
在1890年補體被首次發現,是提供了保護宿主免受病原體入侵的先天免疫系統的一部分,是對抗外來病原體的第一道免疫防線。活化補體將導致一系列連續的酶促反應,稱爲補體活化,導致形成强效過敏毒素 C3a和C5a,從而引發過多的從化學吸引到細胞雕亡的生理反應。最初認爲補體在入侵的病原體先天免疫中發揮重要作用,然而,最近越來越多證據揭示,補體也在關於T細胞和B細胞的適應性免疫中起重要作用,有助於消除病原體 (Dunkelberger JR and Song WC. (2010) Cell Res. 20:34; Molina H, et al. (1996) Proc Natl Acad Sci U S A. 93:3357);維持免疫原性避免病毒再次入侵以及多種人類的病理狀態(Qu, H, et al. (2009) Mol Immunol. 47:185; Wagner, E. and Frank MM. (2010) No/ Rev Drug Discov. 9:43)。形成補體系統的大多數是蛋白質,包括補體成分蛋白C3(在本文中也稱爲C3),大量合成並分泌到肝臟中的肝細胞中的血液中,活化系統的炎症反應導致吞噬細胞吸引和調理作用,從而清除病原體、免疫複合物和細胞碎片。Complement was first discovered in 1890 and is part of the innate immune system that protects the host from pathogen invasion. It is the first line of immune defense against foreign pathogens. Activating complement will lead to a series of sequential enzymatic reactions called complement activation, leading to the formation of the potent anaphylatoxins C3a and C5a, thereby triggering a plethora of physiological reactions ranging from chemical attraction to cell death. Complement was initially thought to play an important role in innate immunity to invading pathogens, however, more and more recent evidence has revealed that complement also plays an important role in adaptive immunity involving T cells and B cells, helping to eliminate pathogens (Dunkelberger JR and Song WC. (2010) Cell Res. 20:34; Molina H, et al. (1996) Proc Natl Acad Sci U S A. 93:3357); maintaining immunogenicity to avoid viral reinvasion and various human pathological conditions (Qu, H, et al. (2009) Mol Immunol. 47:185; Wagner, E. and Frank MM. (2010) No/ Rev Drug Discov. 9:43). Most of the components that form the complement system are proteins, including the complement component protein C3 (also referred to as C3 in this article), which are synthesized in large quantities and secreted into the blood in hepatocytes in the liver, activating the inflammatory response of the system leading to the attraction and opsonization of phagocytes function to remove pathogens, immune complexes, and cellular debris.
補體成分C3 是補體系統活化途徑的關鍵組成部分,已知補體活化通過三種不同的途徑發生:旁路途經、經典途徑以及凝集蛋白途徑,它們全部會合在所謂的補體成分C3轉化酶複合物的形成中,這些酶複合物將補體成分 C3 蛋白裂解爲 C3a 和 C3b;一旦被裂解,C3b 形成複合物的一部分,複合物反過來將 C5 切割成 C5a 和 C5b;裂解後,C5b 是主要補體途徑效應物,即膜攻擊複合物的關鍵成分之一。 因此,補體成分C3(也稱爲C3)的作用是必不可少的,因爲它在補體活化的所有三種途徑中起作用。Complement component C3 is a key component of the complement system activation pathway. Complement activation is known to occur through three different pathways: the alternative pathway, the classical pathway, and the lectin pathway, all of which converge in the formation of the so-called complement component C3 convertase complex. , these enzyme complexes cleave the complement component C3 protein into C3a and C3b; once cleaved, C3b forms part of a complex that in turn cleaves C5 into C5a and C5b; after cleavage, C5b is the primary complement pathway effector , one of the key components of the membrane attack complex. Therefore, the role of complement component C3 (also known as C3) is essential as it plays a role in all three pathways of complement activation.
補體系統的異常獲得或遺傳活化以及C3異常或過表達引發許多不同疾病,包括例如:與腎臟相關的C3 腎小球病 (C3G)、免疫複合物介導的腎小球腎炎(IC 介導的 GN),感染後腎小球腎炎 (PIGN)、系統性紅斑狼瘡、狼瘡性腎炎、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)、非典型溶血性尿毒症候群 (aHUS)、以及其他器官與C3相關的疾病,如視神經脊髓炎 (NMO)、多灶性運動神經病 (MMN)、重症肌無力症力 (MG)、原發性膜性腎病,還已知與補體功能障礙有關其他器官的疾病,例如年齡相關性黃斑變性(AMD)、類風濕性關節炎(RA)、抗中性粒細胞胞漿自身抗體相關血管炎(ANCA-AV)、牙周疾病和牙周病、瘧疾貧血、敗血症以及神經退行性疾病。Abnormal acquisition or genetic activation of the complement system and abnormal or overexpression of C3 cause many different diseases, including, for example, kidney-related C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis (IC-mediated glomerulonephritis) GN), post-infectious glomerulonephritis (PIGN), systemic lupus erythematosus, lupus nephritis, ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS) ), and C3-related diseases of other organs, such as neuromyelitis optica (NMO), multifocal motor neuropathy (MMN), myasthenia gravis (MG), primary membranous nephropathy, are also known to be related to complement function Disorders involving other organs, such as age-related macular degeneration (AMD), rheumatoid arthritis (RA), antineutrophil cytoplasmic autoantibody-associated vasculitis (ANCA-AV), periodontal disease, and periodontal disease disease, malarial anemia, sepsis, and neurodegenerative diseases.
目前,可用於治療補體成分C3相關疾病的治療,這些疾病需要耗時和侵入性管理,費用高昂,具有巨大臨床未滿足的需求;因此,本領域需要給予患有補體成分 C3 相關疾病的患者替代療法或者聯合療法。Currently, treatments are available for the treatment of complement component C3-related diseases that require time-consuming and invasive management, are expensive, and have a huge clinical unmet need; therefore, the field needs to give patients with complement component C3-related diseases an alternative therapy or combination therapy.
根據本發明的一個方面,提供了一種用於抑制補體成分C3表達的雙鏈核糖核酸(dsRNA)試劑,該dsRNA試劑包含正義鏈和反義鏈,在反義鏈中的核苷酸位置2至18處包含與 C3 RNA轉錄物互補的區域,其中互補區域包含與表1-3中所列出的反義序列之一相差0、1、2或3個核苷酸的至少15個連續核苷酸,並且任選地包含靶向配體。According to one aspect of the present invention, a double-stranded ribonucleic acid (dsRNA) reagent for inhibiting the expression of complement component C3 is provided. The dsRNA reagent includes a sense strand and an antisense strand, and the nucleotide positions 2 to 3 in the antisense strand are 18 contains a region complementary to the C3 RNA transcript, where the complementary region contains at least 15 contiguous nucleotides that differ by 0, 1, 2, or 3 nucleotides from one of the antisense sequences listed in Tables 1-3 acid, and optionally includes a targeting ligand.
在一些實施方案中,與C3 RNA轉錄物互補的區域包含與表1-3中所列出的反義序列之一相差不超過3個核苷酸的至少15、16、17、18或19個連續核苷酸。In some embodiments, the region complementary to the C3 RNA transcript comprises at least 15, 16, 17, 18, or 19 that differ by no more than 3 nucleotides from one of the antisense sequences listed in Tables 1-3 Consecutive nucleotides.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域至少基本互補,並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is at least substantially complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域完全互補並且在表1-3之一中提供。In some embodiments, the antisense strand of the dsRNA is fully complementary to any target region of SEQ ID NO: 1 and is provided in one of Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中所列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列至少基本上互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is at least substantially complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個正義鏈序列,其中正義鏈序列與dsRNA試劑中的反義鏈序列完全互補。In some embodiments, the dsRNA reagent includes any one of the sense strand sequences listed in Tables 1-3, wherein the sense strand sequence is completely complementary to the antisense strand sequence in the dsRNA reagent.
在一些實施方案中,dsRNA試劑包含表1-3中列出的任一個反義鏈序列。In some embodiments, the dsRNA reagent comprises any of the antisense strand sequences listed in Tables 1-3.
在一些實施方案中,dsRNA試劑包含表1-3中作爲雙鏈體序列列出的任一個序列。In some embodiments, the dsRNA agent comprises any of the sequences listed as duplex sequences in Tables 1-3.
在一些實施方案中,dsRNA試劑包含至少一個修飾的核苷酸。In some embodiments, the dsRNA agent contains at least one modified nucleotide.
在一些實施方案中,反義鏈的所有核苷酸或基本上所有核苷酸都是修飾的核苷酸。在一些實施方案中,至少一種修飾的核苷酸包括:2'-O-甲基核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2',3'-seco核苷酸模擬物、鎖核苷酸、開環核酸核苷酸(unlocked nucleic acid nucleotide, UNA)、乙二醇核酸核苷酸(glycol nucleic acid nucleotide,GNA)、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、無鹼基核苷酸、核糖醇、反向核苷酸、反向無鹼基核苷酸、反向2'-OMe 核苷酸、反向2'-脫氧核苷酸、2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-OMe核苷酸、包括5'-硫代磷酸酯基團的核苷酸、或與膽固醇衍生物或十二烷酸雙癸醯胺基團連接的末端核苷酸、2'-氨基修飾的核苷酸、氨基磷酸酯或包含核苷酸的非天然鹼基。在一些實施方案中,反義鏈包含15個或更多個獨立選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中少於6個2'-氟核苷酸修飾的核苷酸。在某些實施方案中,反義鏈包含3個或5個2'-氟核苷酸,優選地,反義鏈包含5個2'-氟核苷酸。 在一些實施方案中,正義鏈包含15個或更多個獨立選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中少於4個2'-氟核苷酸修飾的核苷酸。 在某些實施方案中,正義鏈包含 3 個 2'-氟核苷酸。 在一些實施方案中,反義鏈包含15個或更多個獨立選自2'-O-甲基核苷酸和2'-氟核苷酸的修飾核苷酸,其中至少16個修飾核苷酸是2'-O-甲基核苷酸並且位於反義鏈5'端的第2、7、12、14和/或16位是2'-氟核苷酸修飾的核苷酸(從反義鏈5'第一個配對的核苷酸開始計算)。在一些實施例中,正義鏈包含獨立地選自2' -O-甲基核苷酸和2' - 氟核苷酸的 15 個或更多修飾核苷酸,其中至少 18 個修飾核苷酸是2' -O-甲基核苷酸並且位於正義鏈3'端的第9、11和/或13位是2'-氟核苷酸修飾的核苷酸(從正義鏈3'第一個配對的核苷酸開始計算)。在一些實施例中,反義鏈包含在從5'末端到3'末端的方向上,反義鏈的第2、7、12、14和16位的核苷酸是2'-氟修飾的核苷酸,從反義鏈5'端第一個配對的核苷酸開始計算,並且每個反義鏈中其他位置的核苷酸獨立地是非氟修飾的核苷酸。在一些實施方案中,反義鏈在從5'末端到3'末端的方向上包含位置反義鏈的第2、5、12、14和16位是2'-氟修飾的核苷酸,從反義鏈5'第一個配對的核苷酸開始計算,並且反義鏈中其他位置的每個核苷酸獨立地是非氟修飾的核苷酸。 在一些實施例中,正義鏈包含在從3'末端到5'末端的方向上,在正義鏈的位置9、11和13的核苷酸是2'-氟修飾的核苷酸,從正義鏈3'端第一個配對的核苷酸開始計算,並且每個核苷酸在有義鏈中的其他位置獨立地是非氟修飾的核苷酸。在一些實施方案中,反義鏈在從5'末端到3'末端的方向上包含位置反義鏈的第7位是UNA修飾的核苷酸,從反義鏈5'第一個配對的核苷酸開始計算。In some embodiments, all or substantially all of the nucleotides of the antisense strand are modified nucleotides. In some embodiments, at least one modified nucleotide includes: 2'-O-methyl nucleotide, 2'-fluoro nucleotide, 2'-deoxy nucleotide, 2',3'-seco core Glycolic acid mimetic, locked nucleotide, unlocked nucleic acid nucleotide (UNA), glycol nucleic acid nucleotide (GNA), 2'-F-arabinose nucleoside acid, 2'-methoxyethyl nucleotide, abasic nucleotide, ribitol, reverse nucleotide, reverse abasic nucleotide, reverse 2'-OMe nucleotide, reverse To 2'-deoxynucleotides, 2'-amino modified nucleotides, 2'-alkyl modified nucleotides, morpholino nucleotides and 3'-OMe nucleotides, including 5'-sulfide Nucleotides with phosphoric acid ester groups, or terminal nucleotides linked to cholesterol derivatives or dodecyl dodecylamine groups, 2'-amino modified nucleotides, phosphoramidates or nucleosides containing Unnatural base of acid. In some embodiments, the antisense strand contains 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, of which less than 6 are 2' -Fluoronucleotide modified nucleotides. In certain embodiments, the antisense strand contains 3 or 5 2'-fluoronucleotides, preferably the antisense strand contains 5 2'-fluoronucleotides. In some embodiments, the sense strand contains 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, of which less than 4 are 2'- Fluoronucleotide modified nucleotides. In certain embodiments, the sense strand contains 3 2'-fluoronucleotides. In some embodiments, the antisense strand contains 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, wherein at least 16 modified nucleosides The acid is a 2'-O-methyl nucleotide and positions 2, 7, 12, 14 and/or 16 at the 5' end of the antisense strand are 2'-fluoronucleotide modified nucleotides (from the antisense strand) Counting begins with the first paired nucleotide at 5' of the strand). In some embodiments, the sense strand comprises 15 or more modified nucleotides independently selected from 2'-O-methyl nucleotides and 2'-fluoronucleotides, wherein at least 18 modified nucleotides are 2'-O-methyl nucleotides and positions 9, 11 and/or 13 located at the 3' end of the sense strand are 2'-fluoronucleotide modified nucleotides (the first paired nucleotide from the 3' end of the sense strand counting from nucleotides). In some embodiments, the antisense strand is comprised in the direction from the 5' end to the 3' end, and nucleotides at positions 2, 7, 12, 14, and 16 of the antisense strand are 2'-fluoro modified cores The nucleotides are counted starting from the first paired nucleotide at the 5' end of the antisense strand, and nucleotides at other positions in each antisense strand are independently non-fluorine modified nucleotides. In some embodiments, the antisense strand includes positions 2, 5, 12, 14, and 16 of the antisense strand in the direction from the 5' end to the 3' end, which are 2'-fluoro modified nucleotides, from Counting begins with the first paired nucleotide 5' of the antisense strand, and each nucleotide elsewhere in the antisense strand is independently a non-fluorine modified nucleotide. In some embodiments, the sense strand contains nucleotides at positions 9, 11, and 13 of the sense strand in the direction from the 3' end to the 5' end, which are 2'-fluoro modified nucleotides, from the sense strand Counting begins with the first paired nucleotide at the 3' end, and each nucleotide elsewhere in the sense strand is independently a non-fluorine modified nucleotide. In some embodiments, the antisense strand includes a position in the direction from the 5' end to the 3' end of the antisense strand that is a UNA modified nucleotide, 5' from the first paired core of the antisense strand Start counting nucleotides.
在一些實施方案中,一種用於抑制補體成分C3表達的雙鏈核糖核酸(dsRNA)試劑,該dsRNA試劑包含正義鏈和反義鏈,在反義鏈中的核苷酸位置2至18處包含與C3RNA轉錄物互補的區域,反義鏈與正義鏈完全或者部分互補,並且任選地包含靶向配體,其中每條鏈的長度爲17至40個核苷酸,其中有義鏈序列包含由式(I)表示: 5′-(N′ L) n′N′ LN′ LN′ LN′ LN′ LN′ FN′ LN′ FN′ LN′ FN′ LN′ LN′ LN′ LN′ LN′ LN′ L(N′ L) m′-3′ (I) 其中:每個N′ F表示一個2'-氟修飾的核苷酸;每個N′ L獨立代表修飾或未修飾的核苷酸但不代表2'-氟修飾的核苷酸,n'爲0-7的整數, m'爲0-3的整數。在某些實施方案中,m′爲1。在某些實施方案中,n′爲3 ,m′爲1;或者 n′爲0 ,m′爲0;或 n′爲3,m′爲3。 In some embodiments, a double-stranded ribonucleic acid (dsRNA) agent for inhibiting expression of complement component C3, the dsRNA agent comprising a sense strand and an antisense strand, comprising at nucleotide positions 2 to 18 in the antisense strand A region complementary to the C3 RNA transcript, with the antisense strand being fully or partially complementary to the sense strand and optionally containing a targeting ligand, where each strand is 17 to 40 nucleotides in length, where the sense strand sequence contains Expressed by formula (I): 5′-(N′ L ) n′ N′ L N ′ L N′ L N′ L N′ L N′ F N′ L N′ F N′ L N′ F N′ L N′ L N′ L N′ L N′ L N′ L N′ L (N′ L ) m′ -3′ (I) where: each N′ F represents a 2′-fluorine modified nucleotide; Each N' L independently represents a modified or unmodified nucleotide but does not represent a 2'-fluoro modified nucleotide, n' is an integer from 0 to 7, and m' is an integer from 0 to 3. In certain embodiments, m' is 1. In certain embodiments, n' is 3 and m' is 1; or n' is 0 and m' is 0; or n' is 3 and m' is 3.
在一些實施方案中,dsRNA試劑包括在引導鏈的5'末端處的E-乙烯基膦酸酯核苷酸。In some embodiments, the dsRNA agent includes an E-vinylphosphonate nucleotide at the 5' end of the guide strand.
在一些實施方案中,dsRNA試劑包含至少一個硫代磷酸酯核苷間鍵聯。在一些實施方案中,正義鏈包含至少一個硫代磷酸酯核苷間鍵聯。在一些實施方案中,反義鏈包含至少一個硫代磷酸酯核苷間鍵聯。在一些實施方案中,正義鏈包含1、2、3、4、5或6個硫代磷酸酯核苷間鍵聯。在一些實施方案中,反義鏈包含1、2、3、4、5或6個硫代磷酸酯核苷間鍵聯。In some embodiments, the dsRNA agent contains at least one phosphorothioate internucleoside linkage. In some embodiments, the sense strand contains at least one phosphorothioate internucleoside linkage. In some embodiments, the antisense strand contains at least one phosphorothioate internucleoside linkage. In some embodiments, the sense strand contains 1, 2, 3, 4, 5, or 6 phosphorothioate internucleoside linkages. In some embodiments, the antisense strand contains 1, 2, 3, 4, 5, or 6 phosphorothioate internucleoside linkages.
在一些實施方案中,正義鏈和反義鏈的所有或基本上所有核苷酸都是修飾的核苷酸。In some embodiments, all or substantially all nucleotides of the sense and antisense strands are modified nucleotides.
在一些實施方案中,修飾的正義鏈是表2和/或表3中列出的修飾的正義鏈序列。在一些實施方案中,修飾的反義鏈是表2和/或表3中列出的修飾的反義鏈序列。In some embodiments, the modified sense strand is a modified sense strand sequence listed in Table 2 and/or Table 3. In some embodiments, the modified antisense strand is a modified antisense strand sequence listed in Table 2 and/or Table 3.
在一些實施方案中,正義鏈與反義鏈互補或基本互補,並且互補區域的長度在16至23個核苷酸之間。在一些實施方案中,互補區域的長度爲19-21個核苷酸。在一些實施方案中,互補區域的長度爲14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個核苷酸。在一些實施方案中,dsRNA試劑中每條鏈的長度不超過40個核苷酸。在一些實施方案中,每條鏈的長度不超過30個核苷酸。在一些實施方案中,每條鏈的長度不超過25個核苷酸。在一些實施方案中,每條鏈的長度不超過23個核苷酸。在一些實施方案中,每條鏈的長度不超過21個核苷酸。在一些實施方案中,每條鏈的長度爲15, 16, 17, 18, 19, 20, 21, 22或 23個核苷酸。In some embodiments, the sense strand is complementary or substantially complementary to the antisense strand, and the complementary region is between 16 and 23 nucleotides in length. In some embodiments, the complementary region is 19-21 nucleotides in length. In some embodiments, the complementary region is 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length. In some embodiments, each strand in the dsRNA agent is no more than 40 nucleotides in length. In some embodiments, each strand is no more than 30 nucleotides in length. In some embodiments, each strand is no more than 25 nucleotides in length. In some embodiments, each strand is no more than 23 nucleotides in length. In some embodiments, each strand is no more than 21 nucleotides in length. In some embodiments, each strand is 15, 16, 17, 18, 19, 20, 21, 22, or 23 nucleotides in length.
在一些實施方案中,所述C3 RNA轉錄物是SEQ ID NO:1。In some embodiments, the C3 RNA transcript is SEQ ID NO: 1.
在一些實施方案中,dsRNA試劑包含至少一種修飾的核苷酸並且還包含一個或更多個靶向基團或連接基團。In some embodiments, a dsRNA agent contains at least one modified nucleotide and further contains one or more targeting or linking groups.
在一些實施方案中,一個或更多個靶向基團或連接基團與正義鏈綴合。在一些實施方案中,靶向基團或連接基團包括N-乙醯基-半乳糖胺(GalNAc)。In some embodiments, one or more targeting groups or linking groups are conjugated to the sense strand. In some embodiments, the targeting group or linking group includes N-acetyl-galactosamine (GalNAc).
在一些實施方案中,靶向基團或連接基團如式(X)所示的結構,包括靶向部分、鏈接鍵以及接頭W,其中靶向部分選自N-乙醯基-半乳糖胺衍生物(GalNAc),其通過鏈接鍵與接頭W鏈接,接頭W具有如式(XI)所示的結構,X選自O、NH 2或者S,Y ﹣選自:O ﹣、S ﹣、甲基或者NRaRb,Ra和Rb分別獨立的選自氫、取代或者未取代的C 1-C 6的烷基、取代或者未取代的C 3-C 6的環烷基,或者Ra和Rb與附著的原子一起鏈接形成含有1-3個N、O、S雜原子組成的3-12元雜環烷基, 式(X) (式XI)。 In some embodiments, the targeting group or linking group is a structure represented by formula (X), including a targeting moiety, a linker, and a linker W, wherein the targeting moiety is selected from N-acetyl-galactosamine Derivative (GalNAc), which is linked to the linker W through a linking bond. The linker W has a structure shown in formula (XI), X is selected from O, NH 2 or S, Y - is selected from: O - , S - , A group or NRaRb, Ra and Rb are independently selected from hydrogen, substituted or unsubstituted C 1 -C 6 alkyl, substituted or unsubstituted C 3 -C 6 cycloalkyl, or Ra and Rb are with attached The atoms are linked together to form a 3-12 membered heterocycloalkyl group containing 1-3 N, O, and S heteroatoms. Formula (X) (Formula XI).
在一些優選的實施例中,取代或者未取代的C 1-C 6的烷基、取代或者未取代的C 3-C 6的環烷基中,所述的取代基選自羥基、氨基。在一些實施方案中,X選自O或者S,Y ﹣選自:O ﹣、S ﹣。在一些實施方案中,靶向基團中的鏈接鍵選自聚乙二醇、任選取代的C 2-C 12烷基, 取代或者未取代的C 3-C 12環烷基、取代或者未取代的C 3-C 12雜環烷基、取代或者未取代的C 3-C 12醯胺。在一些實施方案中,取代或者未取代的C 2-C 12烷基, 取代或者未取代的C 3-C 12環烷基、取代或者未取代的C 3-C 12雜環烷基、取代或者未取代的C 3-C 12醯胺中,所述的取代基選自羥基、羰基。 In some preferred embodiments, in the substituted or unsubstituted C 1 -C 6 alkyl group or the substituted or unsubstituted C 3 -C 6 cycloalkyl group, the substituent is selected from hydroxyl and amino. In some embodiments, X is selected from O or S, and Y - is selected from: O - , S - . In some embodiments, the linkage in the targeting group is selected from polyethylene glycol, optionally substituted C 2 -C 12 alkyl, substituted or unsubstituted C 3 -C 12 cycloalkyl, substituted or unsubstituted Substituted C 3 -C 12 heterocycloalkyl, substituted or unsubstituted C 3 -C 12 amide. In some embodiments, substituted or unsubstituted C 2 -C 12 alkyl, substituted or unsubstituted C 3 -C 12 cycloalkyl, substituted or unsubstituted C 3 -C 12 heterocycloalkyl, substituted or In unsubstituted C 3 -C 12 amide, the substituent is selected from hydroxyl and carbonyl.
在一些實施方案中,靶向基團中的鏈接鍵優選自以下片段: 、 、 、 、 、 和 , 其中每個m獨立的爲1-6的整數,每個n、o、p獨立的爲0或者1,每個q 1與q 2分別獨立的爲0、1或者2。 In some embodiments, the linkage in the targeting group is preferably from the following fragments: , , , , , and , where each m is independently an integer from 1 to 6, each n, o, p is independently 0 or 1, and each q 1 and q 2 are independently 0, 1 or 2.
在一些實施方案中,靶向基團中的鏈接鍵更優選自以下片段: 、 、 、 、 、 。 In some embodiments, the linkage in the targeting group is more preferably from the following fragments: , , , , , .
在一些實施方案中,靶向基團中的靶向部分具有爲以下結構片段, n''分別獨立爲1或者2。 In some embodiments, the targeting moiety in the targeting group has the following structural fragment, n'' is independently 1 or 2 respectively.
在一些實施方案中,靶向基團具有以下結構:
在一些實施方案中,dsRNA試劑包含與正義鏈的5'-末端綴合的靶向基團。在一些實施方案中,dsRNA試劑包含與正義鏈的3'-末端綴合的靶向基團。In some embodiments, the dsRNA agent comprises a targeting group conjugated to the 5'-end of the sense strand. In some embodiments, the dsRNA agent comprises a targeting group conjugated to the 3'-end of the sense strand.
在一些實施方案中,反義鏈在3'-末端包含一個反向無鹼基殘基。在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個反向無鹼基殘基。In some embodiments, the antisense strand contains an inverted abasic residue at the 3'-end. In some embodiments, the sense strand contains one or two reverse abasic residues at the 3' or/and 5' end.
在一些實施方案中,dsRNA試劑具有兩個平末端。In some embodiments, the dsRNA agent has two blunt ends.
在一些實施方案中,至少一條鏈包含至少1個核苷酸長的3'突出端。在一些實施方案中,至少一條鏈包含至少2個核苷酸長的3'突出端。在一個實施例中,正義鏈在3’‑末端和/或5’‑末端具有1‑10個核苷酸突出端,如1、2、3、4、5、6、7、8、9、或10個核苷酸的突出端。In some embodiments, at least one strand includes a 3' overhang that is at least 1 nucleotide long. In some embodiments, at least one strand includes a 3' overhang that is at least 2 nucleotides long. In one embodiment, the sense strand has a 1-10 nucleotide overhang at the 3'-end and/or 5'-end, such as 1, 2, 3, 4, 5, 6, 7, 8, 9, or a 10-nucleotide overhang.
本發明的另一個方面,提供了補體成分C3表達的雙鏈核糖核酸(dsRNA)試劑,該dsRNA試劑包含正義鏈和反義鏈,其中每條鏈的長度是14個至30個核苷酸,在反義鏈中的核苷酸位置2至18處包含與 C3 RNA轉錄物互補的區域,其中互補區域包含與式I中所列出的反義序列之一相差0、1、2或3個核苷酸的至少15個連續核苷酸,並且任選地包含靶向配體: 雙鏈核糖核酸(dsRNA)試劑反義鏈: 5’ -N a-(A 1A 2A 3A 4)i-N b–(B 1B 2B 3B 4) -N b-(C 1C 2C 3C 4C 5)j -N a- 3’ 其中: i和 j,獨立選自0或者1; 每個 N a和 N b分別獨立的代表 0-17寡核苷酸; A 1A 2A 3A 4表示四個連續的核苷酸依次被代表小寫2'-OMe、大寫2'-氟、小寫2'-OMe、小寫2'-OMe修飾的一個基序,優選的A 1與A 2之間、A 2與A 3之間進一步均包含硫代磷酸酯核苷間鍵聯; B 1B 2B 3B 4表示四個連續的核苷酸均被小寫2'-OMe修飾的一個基序; C 1C 2C 3C 4C 5表示五個連續的核苷酸均被小寫2'-OMe修飾的的一個基序,優選的C 3與C 4之間、 C 4與C 5之間進一步包含硫代磷酸酯核苷間鍵聯。 Another aspect of the invention provides a double-stranded ribonucleic acid (dsRNA) reagent expressing complement component C3, the dsRNA reagent comprising a sense strand and an antisense strand, wherein the length of each strand is 14 to 30 nucleotides, Comprises a region complementary to the C3 RNA transcript at nucleotide positions 2 to 18 in the antisense strand, wherein the complementary region contains a 0, 1, 2, or 3 nucleotide difference from one of the antisense sequences listed in Formula I At least 15 consecutive nucleotides of nucleotides, and optionally includes a targeting ligand: Double-stranded ribonucleic acid (dsRNA) reagent Antisense strand: 5'-N a -(A 1 A 2 A 3 A 4 ) iN b –(B 1 B 2 B 3 B 4 ) -N b -(C 1 C 2 C 3 C 4 C 5 )j -N a - 3' where: i and j are independently selected from 0 or 1; each Each N a and N b independently represent 0-17 oligonucleotides; A 1 A 2 A 3 A 4 represents four consecutive nucleotides, which are represented in turn by lowercase 2'-OMe, uppercase 2'-fluoro, lowercase 2'-OMe, a motif modified by lowercase 2'-OMe, preferably between A 1 and A 2 , and between A 2 and A 3 , further including a phosphorothioate internucleoside linkage; B 1 B 2 B 3 B 4 represents a motif in which four consecutive nucleotides are all modified with lowercase 2'-OMe; C 1 C 2 C 3 C 4 C 5 represents five consecutive nucleotides are all modified with lowercase 2'-OMe One of the modified motifs, preferably between C3 and C4 , and between C4 and C5 , further includes a phosphorothioate internucleoside linkage.
在一些實施例中, N a分別獨立的代表0個寡核苷酸, N b分別獨立的代表2-5個經本文所用化學修飾的寡核苷酸,i和 j分別代表1。 In some embodiments, Na each independently represents 0 oligonucleotides, N b each independently represents 2-5 oligonucleotides chemically modified as used herein, and i and j respectively represent 1.
在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域至少基本互補。在一些實施方案中,dsRNA的反義鏈與SEQ ID NO: 1的任意靶區域完全互補。在一些實施方案中, dsRNA任一項所述的正義鏈序列與所述dsRNA試劑中的反義鏈序列至少基本上互補。在一些實施方案中, dsRNA任一項所述的正義鏈序列與所述dsRNA試劑中的反義鏈序列完全互補。In some embodiments, the antisense strand of the dsRNA is at least substantially complementary to any target region of SEQ ID NO: 1. In some embodiments, the antisense strand of the dsRNA is completely complementary to any target region of SEQ ID NO: 1. In some embodiments, the sense strand sequence of any one of the dsRNAs is at least substantially complementary to the antisense strand sequence in the dsRNA agent. In some embodiments, the sense strand sequence of any one of the dsRNAs is completely complementary to the antisense strand sequence in the dsRNA agent.
在一些實施方案中,正義鏈所有或基本上所有核苷酸都是修飾的核苷酸。In some embodiments, all or substantially all nucleotides of the sense strand are modified nucleotides.
在一些實施方案中,正義鏈在3'或/和5'末端包含一個或兩個反向無鹼基殘基。In some embodiments, the sense strand contains one or two reverse abasic residues at the 3' or/and 5' end.
在一些實施方案中,dsRNA試劑具有兩個平末端。在一些實施方案中,至少一條鏈包含至少1個核苷酸長的3'突出端。在一些實施方案中,至少一條鏈包含至少2個核苷酸長的3'突出端。在一個實施例中,正義鏈在3’‑末端和/或5’‑末端具有1‑10核苷酸突出端,如1、2、3、4、5、6、7、8、9、或10個核苷酸的突出端。In some embodiments, the dsRNA agent has two blunt ends. In some embodiments, at least one strand includes a 3' overhang that is at least 1 nucleotide long. In some embodiments, at least one strand includes a 3' overhang that is at least 2 nucleotides long. In one embodiment, the sense strand has a 1-10 nucleotide overhang at the 3'-end and/or 5'-end, such as 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 nucleotide overhang.
在一些實施方案中,dsRNA試劑包含至少一種修飾的核苷酸並且還包含一個或更多個靶向基團或連接基團。在一些實施方案中,一個或更多個靶向基團或連接基團與正義鏈綴合。在一些實施方案中,靶向基團或連接基團包括N-乙醯基-半乳糖胺(GalNAc)。在一些實施方案中,靶向基團如本文所用,GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種。In some embodiments, a dsRNA agent contains at least one modified nucleotide and further contains one or more targeting or linking groups. In some embodiments, one or more targeting groups or linking groups are conjugated to the sense strand. In some embodiments, the targeting group or linking group includes N-acetyl-galactosamine (GalNAc). In some embodiments, the targeting group is as used herein, GLS-1, GLS-2, GLS-3, GLS-4, GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO- 6. Any one of GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16.
根據本發明的另一個方面,提供了一種組合物,其包含本發明上述dsRNA試劑方面的任意實施方案。According to another aspect of the invention, there is provided a composition comprising any embodiment of the above-described dsRNA agent aspect of the invention.
在某些實施方案中,組合物還包含藥學上可接受的載體。在一些實施方案中,組合物還包含一種或更多種另外的治療劑。In certain embodiments, the composition further includes a pharmaceutically acceptable carrier. In some embodiments, the composition further includes one or more additional therapeutic agents.
在某些實施方案中,組合物被包裝在藥盒、容器、包裝物、分配器、預填充注射器或小瓶中。In certain embodiments, the compositions are packaged in a kit, container, wrapper, dispenser, prefilled syringe, or vial.
在一些實施方案中,組合物被配製用於皮下給藥或被配製用於靜脈內(IV)給藥。In some embodiments, the compositions are formulated for subcutaneous administration or are formulated for intravenous (IV) administration.
根據本發明的另一方面,提供了一種細胞,其包含本發明上述dsRNA試劑方面的任意實施方案。According to another aspect of the invention, there is provided a cell comprising any embodiment of the above-described dsRNA agent aspect of the invention.
在一些實施方案中,細胞是哺乳動物細胞,任選地是人細胞。In some embodiments, the cells are mammalian cells, optionally human cells.
根據本發明的另一方面,提供了一種抑制細胞中C3基因表達的方法,該方法包括:(i)製備包含有效量的上述dsRNA試劑或上述組合物方面的任意實施方案的細胞。According to another aspect of the present invention, there is provided a method of inhibiting C3 gene expression in a cell, the method comprising: (i) preparing a cell comprising an effective amount of the above-mentioned dsRNA agent or any embodiment of the above-mentioned composition aspect.
在某些實施方案中,該方法還包括:(ii)將製備的細胞維持足夠的時間以獲得C3基因的mRNA轉錄物的降解,從而抑制細胞中C3基因的表達。In certain embodiments, the method further includes: (ii) maintaining the prepared cells for a sufficient time to obtain degradation of the mRNA transcript of the C3 gene, thereby inhibiting the expression of the C3 gene in the cell.
在一些實施方案中,細胞在對象體內並且dsRNA試劑經皮下施用於對象。In some embodiments, the cells are in the subject and the dsRNA agent is administered subcutaneously to the subject.
在一些實施方案中,細胞在對象體內並且dsRNA試劑通過IV給藥施用於對象。In some embodiments, the cells are in the subject and the dsRNA agent is administered to the subject by IV administration.
在某些實施方案中,該方法還包括在向對象施用dsRNA 試劑後評估對C3基因的抑制,其中評估的手段包括:(i) 確定對象中C3相關疾病或病症的一個或更多個生理特徵,以及(ii)將所確定的生理特徵與C3相關疾病或病症的基線治療前生理特徵和/或C3相關疾病或病症的對照生理特徵進行比較,其中的比較結果指示對象中C3基因表達的抑制存在或不存在。In certain embodiments, the method further includes assessing inhibition of the C3 gene after administering the dsRNA agent to the subject, wherein the assessment includes: (i) determining one or more physiological characteristics of the C3-related disease or disorder in the subject , and (ii) comparing the determined physiological characteristic to a baseline pre-treatment physiological characteristic of the C3-related disease or condition and/or a control physiological characteristic of the C3-related disease or condition, wherein the comparison is indicative of inhibition of C3 gene expression in the subject exists or does not exist.
在一些實施方案中,所確定的生理特徵是在血液中的C3水平;In some embodiments, the physiological characteristic determined is C3 levels in the blood;
在一些實施方案中,以陣發性睡眠性血紅蛋白尿 (PNH)一種相對罕見的疾病爲例,包括一種以補體介導的血管內溶血爲特徵的獲得性溶血性貧血、血紅蛋白尿、骨髓衰竭和血栓形成傾向(形成血栓的傾向)所確定的生理特徵。血液中C3水平和/或C3的降低表明對象中C3基因表達的降低。In some embodiments, exemplified by paroxysmal nocturnal hemoglobinuria (PNH), a relatively rare disease, includes an acquired hemolytic anemia characterized by complement-mediated intravascular hemolysis, hemoglobinuria, bone marrow failure, and Physiological characteristics determined by thrombophilia (tendency to form blood clots). A decrease in C3 levels and/or C3 in the blood indicates a decrease in C3 gene expression in the subject.
根據本發明的另一方面,提供了一種抑制對象中C3基因表達的方法,其包括向對象施用有效量的前述dsRNA試劑方面的實施方案或前述組合物的實施方案。According to another aspect of the present invention, there is provided a method of inhibiting C3 gene expression in a subject, which includes administering to the subject an effective amount of an embodiment of the foregoing dsRNA agent or an embodiment of the foregoing composition.
在一些實施方案中,將dsRNA試劑皮下施用於對象。在某些實施方案中,dsRNA試劑通過IV給藥施用於對象。在一些實施方案中,該方法還包括:在施用dsRNA試劑後評估C3基因的抑制,其中評估手段包括:(i) 確定對象的C3相關疾病或病症的一種或更多種生理特徵;(ii)將確定的生理特徵與C3相關疾病或病症的基線治療前生理特徵和/或C3相關疾病或病症的對照生理特徵進行比較;其中比較結果指示對象中C3基因表達的抑制存在或不存在。在一些實施方案中,所確定的生理特徵是在血液中的C3水平;在一些實施方案中,陣發性睡眠性血紅蛋白尿 (PNH) 是一種相對罕見的疾病,包括一種以補體介導的血管內溶血爲特徵的獲得性溶血性貧血、血紅蛋白尿、骨髓衰竭和血栓形成傾向(形成血栓的傾向)所確定的生理特徵。血液中C3水平和/或C3的降低表明對象中C3基因表達的降低。In some embodiments, the dsRNA agent is administered subcutaneously to the subject. In certain embodiments, the dsRNA agent is administered to the subject via IV administration. In some embodiments, the method further includes: assessing suppression of the C3 gene after administration of the dsRNA agent, wherein the assessing means includes: (i) determining one or more physiological characteristics of the C3-related disease or condition in the subject; (ii) The determined physiological characteristic is compared to a baseline pre-treatment physiological characteristic of the C3-related disease or condition and/or a control physiological characteristic of the C3-related disease or condition; wherein the comparison is indicative of the presence or absence of inhibition of C3 gene expression in the subject. In some embodiments, the physiological characteristic determined is C3 levels in the blood; in some embodiments, paroxysmal nocturnal hemoglobinuria (PNH) is a relatively rare disease involving a complement-mediated vascular Endohemolysis is a physiological feature defined by acquired hemolytic anemia, hemoglobinuria, bone marrow failure, and thrombophilia (tendency to form blood clots). A decrease in C3 levels and/or C3 in the blood indicates a decrease in C3 gene expression in the subject.
根據本發明的另一方面,提供了一種治療與C3蛋白相關之疾病或病症的方法,其包括:向對象施用有效量的本發明的前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以抑制C3基因表達。According to another aspect of the present invention, there is provided a method of treating a disease or disorder associated with C3 protein, which includes: administering to a subject an effective amount of any embodiment of the foregoing dsRNA agent aspect of the present invention or the foregoing composition of the present invention. Any embodiment to inhibit C3 gene expression.
在某些實施方式中,C3相關障礙選自:與腎臟相關的C3 腎小球病 (C3G)、免疫複合物介導的腎小球腎炎(IC 介導的 GN)、感染後腎小球腎炎 (PIGN)、系統性紅斑狼瘡、狼瘡性腎炎、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)、非典型溶血性尿毒症候群 (aHUS),以及其他器官與C3相關的疾病,如視神經脊髓炎 (NMO)、多灶性運動神經病 (MMN)、重症肌無力症 (MG)、原發性膜性腎病,還已知與補體功能障礙有關其他器官的疾病,例如年齡相關性黃斑變性(AMD)、類風濕性關節炎(RA)、抗中性粒細胞胞漿自身抗體相關血管炎(ANCA-AV)、牙周疾病和牙周病、瘧疾貧血、敗血症以及神經退行性疾病,優選爲C3 腎小球病 (C3G)、陣發性睡眠性血紅蛋白尿症(PNH)、非典型溶血性尿毒症候群(aHUS)、狼瘡腎炎、IgA腎病(IgA N)和原發性膜性腎病、年齡相關性黃斑變性(AMD)。In certain embodiments, the C3-associated disorder is selected from: kidney-associated C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis (IC-mediated GN), post-infectious glomerulonephritis (PIGN), systemic lupus erythematosus, lupus nephritis, ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS), and other organ C3-related Diseases such as neuromyelitis optica (NMO), multifocal motor neuropathy (MMN), myasthenia gravis (MG), primary membranous nephropathy, and diseases of other organs known to be associated with complement dysfunction, such as age-related macular degeneration (AMD), rheumatoid arthritis (RA), antineutrophil cytoplasmic autoantibody-associated vasculitis (ANCA-AV), periodontal disease and periodontal disease, malarial anemia, sepsis, and neurodegeneration Diseases, preferably C3 glomerulopathy (C3G), paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS), lupus nephritis, IgA nephropathy (IgAN) and primary membranous nephropathy Kidney disease, age-related macular degeneration (AMD).
在一些實施方案中,該方法還包括:向對象施用另外的治療方案。In some embodiments, the method further includes administering an additional treatment regimen to the subject.
在一些實施方案中,另外的治療方案包括C3相關疾病或病症的治療。在某些實施方案中,另外的治療方案包括:向對象施用一種或更多種本發明的C3反義多核苷酸;向對象施用非C3 dsRNA治療劑;以及在對象中進行行爲改變。在一些實施方案中,非C3 dsRNA治療劑是以下中的一種:另外的治療劑,例如抗補體組分C5 抗體或其抗原結合片段(例如依庫珠單抗)、iRNA 靶向補體成分 C5 和/或 C3 肽抑制劑(例如康普辛伐他汀)的藥劑, 從而治療患有將從C3減少中受益的疾病的受試者表達。In some embodiments, additional treatment options include treatment of C3-related diseases or conditions. In certain embodiments, additional treatment regimens include: administering to the subject one or more C3 antisense polynucleotides of the invention; administering to the subject a non-C3 dsRNA therapeutic; and effecting behavioral changes in the subject. In some embodiments, the non-C3 dsRNA therapeutic is one of: an additional therapeutic agent, such as an anti-complement component C5 antibody or antigen-binding fragment thereof (e.g., eculizumab), an iRNA targeting complement component C5, and and/or agents that are C3 peptide inhibitors (e.g., simvastatin) to treat subjects with diseases that would benefit from C3 reduction.
在一些實施方案中,將dsRNA試劑皮下施用於對象。在某些實施方案中,dsRNA試劑通過IV給藥施用於對象。在一些實施方案中,該方法還包括確定所施用的雙鏈核糖核酸(dsRNA)試劑在對象中的功效。在一些實施方案中,確定治療在對象中的功效的手段包括:(i) 確定對象中C3相關疾病或病症的一種或更多種生理特徵;(ii)將確定的生理特徵與C3相關疾病或病症的基線治療前生理特徵進行比較,其中該比較結果指示對對象施用雙鏈核糖核酸(dsRNA)試劑的功效存在、不存在和水平中的一種或更多種。在一些實施方案中,所確定的生理特徵是在血液中的C3水平;在一些實施方案中,陣發性睡眠性血紅蛋白尿 (PNH) 是一種相對罕見的疾病,包括一種以補體介導的血管內溶血爲特徵的獲得性溶血性貧血、 血紅蛋白尿、骨髓衰竭和血栓形成傾向(形成血栓的傾向)所確定的生理特徵。血液中C3水平和/或溶血的降低表明對對象施用雙鏈核糖核酸(dsRNA)試劑的有效性的存在。In some embodiments, the dsRNA agent is administered subcutaneously to the subject. In certain embodiments, the dsRNA agent is administered to the subject via IV administration. In some embodiments, the method further includes determining the efficacy of the administered double-stranded ribonucleic acid (dsRNA) agent in the subject. In some embodiments, means for determining the efficacy of a treatment in a subject includes: (i) determining one or more physiological characteristics of a C3-related disease or disorder in the subject; (ii) correlating the determined physiological characteristics with the C3-related disease or disorder Baseline pre-treatment physiological characteristics of the condition are compared, wherein the comparison indicates one or more of the presence, absence, and level of efficacy of a double-stranded ribonucleic acid (dsRNA) agent administered to the subject. In some embodiments, the physiological characteristic determined is C3 levels in the blood; in some embodiments, paroxysmal nocturnal hemoglobinuria (PNH) is a relatively rare disease involving a complement-mediated vascular Endohemolysis is a physiological feature defined by acquired hemolytic anemia, hemoglobinuria, bone marrow failure, and thrombophilia (tendency to form blood clots). A decrease in C3 levels and/or hemolysis in the blood indicates the presence of effectiveness of the double-stranded ribonucleic acid (dsRNA) agent administered to the subject.
根據本發明的另一方面,提供了與對象中C3蛋白的基線治療前水平相比降低對象中C3蛋白水平的方法,其包括向對象施用有效量的本發明的前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以降低C3基因表達的水平。 在一些實施方案中,將dsRNA試劑皮下施用於對象或通過IV施用於對象。According to another aspect of the invention, there is provided a method of reducing the level of C3 protein in a subject as compared to the baseline pre-treatment level of C3 protein in the subject, comprising administering to the subject an effective amount of any embodiment of the foregoing dsRNA agent aspect of the invention. or any embodiment of the foregoing composition of the invention to reduce the level of C3 gene expression. In some embodiments, the dsRNA agent is administered to the subject subcutaneously or by IV.
根據本發明的另一方面,提供了與對象中C3相關疾病或病症的基線治療前生理特徵相比改變對象中C3相關疾病或病症的生理特徵的方法,該方法包括向對象施用有效量的本發明前述dsRNA試劑方面的任意實施方案或本發明的前述組合物的任意實施方案,以改變對象中C3相關疾病或病症的生理特徵。在一些實施方案中,將dsRNA試劑皮下施用於對象或通過IV施用於對象。在某些實施方案中,生理特徵是在血液中的C3水平;在一些實施方案中,所確定的生理特徵是溶血的降低。 序列說明 According to another aspect of the invention, there is provided a method of altering the physiological characteristics of a C3-related disease or disorder in a subject as compared to the baseline pre-treatment physiological characteristics of the C3-related disease or disorder in the subject, the method comprising administering to the subject an effective amount of the present invention. Any embodiment of the foregoing dsRNA agent aspect or any embodiment of the foregoing composition of the invention is invented to alter the physiological characteristics of a C3-related disease or disorder in a subject. In some embodiments, the dsRNA agent is administered to the subject subcutaneously or by IV. In certain embodiments, the physiological characteristic is the level of C3 in the blood; in some embodiments, the physiological characteristic determined is a reduction in hemolysis. Sequence description
雙鏈體AV00375至AV00447顯示在表1中並且顯示了其正義鏈序列。Duplexes AV00375 to AV00447 are shown in Table 1 and their sense strand sequences are shown.
雙鏈體AV00375至AV00447顯示在表1中並且顯示了其反義鏈序列。Duplexes AV00375 to AV00447 are shown in Table 1 and their antisense strand sequences are shown.
SEQ ID NO: 1是人C3 mRNA [NCBI 參考序列:NM_000064.4]。SEQ ID NO: 1 is human C3 mRNA [NCBI reference sequence: NM_000064.4].
在顯示於表2的序列中,化學修飾表示爲:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*;UNA:開環核酸。In the sequences shown in Table 2, chemical modifications are indicated as: upper case: 2'-Fluoro; lower case: 2'-OMe; phosphorothioate: *; UNA: open ring nucleic acid.
在顯示於表3的序列中,體內研究中使用的遞送分子在每條正義鏈的3'或5'末端表示爲“GLX-n”。化學修飾表示爲:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*;UNA:開環核酸;Invab = 反向無鹼基。In the sequences shown in Table 3, the delivery molecules used in the in vivo studies are designated "GLX-n" at the 3' or 5' end of each sense strand. Chemical modifications are represented as: uppercase: 2'-Fluoro; lowercase: 2'-OMe; phosphorothioate: *; UNA: open ring nucleic acid; Invab = reverse abasic.
本發明的部分實施方案包括能夠抑制補體成分C3基因表達的RNAi試劑,例如但不限於雙鏈(ds)RNAi試劑。本發明的C3 dsRNA試劑可以靶向C3轉錄物,導致C3蛋白表達的抑制。本發明的部分實施方案還包括包含C3 RNAi試劑的組合物和使用該組合物的方法。本文公開的C3 RNAi試劑可接附於遞送化合物以遞送至細胞,包括遞送至肝細胞。本發明的藥物組合物可包含至少一種C3 dsRNA試劑和遞送化合物。在本發明的一些實施方案中,遞送化合物是含GalNAc的遞送化合物。遞送至細胞的C3 RNAi試劑能夠抑制C3基因表達,從而降低基因的C3蛋白産物在細胞中的活性。本發明的dsRNAi試劑可用於治療C3相關疾病和病症。這樣的dsRNAi試劑包括例如表1中所顯示的雙鏈體AV00375至AV00447。在一些實施方案中,優選的dsRNAi試劑包括例如雙鏈體AV00378、AV00383、AV00385、AV00386、AV00388、AV00375、AV00413、AV00416或AV00429。在另一些實施方案中,優選的表2中dsRNAi試劑包括例如雙鏈體AV00378、AV00383、AV00385、AV00386、AV00388、AV00375、AV00413、AV00416或AV00429。Some embodiments of the invention include RNAi agents capable of inhibiting expression of the complement component C3 gene, such as, but not limited to, double-stranded (ds) RNAi agents. The C3 dsRNA reagents of the present invention can target C3 transcripts, resulting in the inhibition of C3 protein expression. Some embodiments of the invention also include compositions comprising C3 RNAi agents and methods of using the compositions. The C3 RNAi agents disclosed herein can be attached to delivery compounds for delivery to cells, including delivery to hepatocytes. Pharmaceutical compositions of the present invention may comprise at least one C3 dsRNA agent and a delivery compound. In some embodiments of the invention, the delivery compound is a GalNAc-containing delivery compound. C3 RNAi agents delivered to cells inhibit C3 gene expression, thereby reducing the activity of the gene's C3 protein product in the cell. The dsRNAi agents of the invention can be used to treat C3-related diseases and disorders. Such dsRNAi agents include, for example, duplexes AV00375 to AV00447 shown in Table 1. In some embodiments, preferred dsRNAi agents include, for example, duplexes AV00378, AV00383, AV00385, AV00386, AV00388, AV00375, AV00413, AV00416, or AV00429. In other embodiments, preferred dsRNAi agents of Table 2 include, for example, duplexes AV00378, AV00383, AV00385, AV00386, AV00388, AV00375, AV00413, AV00416, or AV00429.
在本發明的一些實施方案中,降低細胞或對象中C3表達分別治療與細胞或對象中C3表達相關的疾病或病症。可通過降低 C3 活性治療的疾病和病症的非限制性實例是:與腎臟相關的C3 腎小球病 (C3G)、免疫複合物介導的腎小球腎炎(IC 介導的 GN)、感染後腎小球腎炎 (PIGN)、系統性紅斑狼瘡、狼瘡性腎炎、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)、非典型溶血性尿毒症候群 (aHUS)、以及其他器官與C3相關的疾病,如視神經脊髓炎 (NMO)、多灶性運動神經病 (MMN)、重症肌無力症力 (MG)、原發性膜性腎病,還已知與補體功能障礙有關其他器官的疾病,例如年齡相關性黃斑變性(AMD)、類風濕性關節炎(RA)、抗中性粒細胞胞漿自身抗體相關血管炎(ANCA-AV)、牙周疾病和牙周病、瘧疾貧血、敗血症以及神經退行性疾病,優選爲C3 腎小球病 (C3G)、陣發性睡眠性血紅蛋白尿症(PNH)、非典型溶血性尿毒症候群(aHUS)、狼瘡腎炎、IgA腎病(IgA N)和原發性膜性腎病、年齡相關性黃斑變性(AMD)。In some embodiments of the invention, reducing C3 expression in a cell or subject treats a disease or disorder associated with C3 expression in a cell or subject, respectively. Non-limiting examples of diseases and conditions that may be treated by reducing C3 activity are: kidney-related C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis (IC-mediated GN), post-infectious disease Glomerulonephritis (PIGN), systemic lupus erythematosus, lupus nephritis, ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS), and other organs C3-related diseases such as neuromyelitis optica (NMO), multifocal motor neuropathy (MMN), myasthenia gravis (MG), primary membranous nephropathy, and complement dysfunction in other organs are also known to be associated with Diseases such as age-related macular degeneration (AMD), rheumatoid arthritis (RA), antineutrophil cytoplasmic autoantibody-associated vasculitis (ANCA-AV), periodontal disease and periodontal disease, malarial anemia, Sepsis and neurodegenerative diseases, preferably C3 glomerulopathy (C3G), paroxysmal nocturnal hemoglobinuria (PNH), atypical hemolytic uremic syndrome (aHUS), lupus nephritis, IgA nephropathy (IgA N) and Primary membranous nephropathy, age-related macular degeneration (AMD).
下面描述了如何製備和使用包含 C3 單鏈(ssRNA)和雙鏈(dsRNA)試劑的組合物來抑制 C3 基因表達,以及用於治療由C3基因表達引起或調節的疾病和病症的組合物和方法。如本文所用,由C3基因表達的存在和/或水平引起或調節的疾病和/或病症稱爲“C3相關疾病和/或病症”。術語“RNAi”也是本領域已知的,並且可以被稱爲“siRNA”。Described below are how to prepare and use compositions containing C3 single-stranded (ssRNA) and double-stranded (dsRNA) agents to inhibit C3 gene expression, as well as compositions and methods for treating diseases and conditions caused or modulated by C3 gene expression. . As used herein, diseases and/or conditions caused or modulated by the presence and/or levels of C3 gene expression are referred to as "C3-associated diseases and/or conditions." The term "RNAi" is also known in the art and may be referred to as "siRNA".
如本文所用,術語“RNAi”是指包含RNA並通過RNA誘導的沉默複合物(RISC)途徑介導RNA轉錄物的靶向切割的試劑。如本領域已知的,RNAi靶區域是指在基因轉錄過程中形成的RNA分子的核苷酸序列的連續部分,其包括信使RNA(mRNA),它是初級轉錄産物RNA的加工産物。該序列的靶標部分將至少足夠長以用作在該部分處或附近進行 RNAi定向切割的底物。靶序列可以是8-30個核苷酸長(包括端值)、10-30個核苷酸長(包括端值)、12-25個核苷酸長(包括端值)、15-23個核苷酸長(包括端值)、16 -23 個核苷酸長(包括端值),或18-23個核苷酸長(包括端值),並包括每個規定範圍內的所有較短長度。在本發明的一些實施方案中,靶序列爲9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25或26個核苷酸長。在某些實施方案中,靶序列的長度在9到26個核苷酸之間(包括端值),包括其間的所有子範圍和整數。例如,雖然不意在限制,但在本發明的某些實施方案中,靶序列爲8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個核苷酸長,該序列與C3基因的RNA轉錄物的至少一部分完全或至少基本上互補。As used herein, the term "RNAi" refers to agents that contain RNA and mediate targeted cleavage of RNA transcripts through the RNA-induced silencing complex (RISC) pathway. As is known in the art, an RNAi target region refers to a contiguous portion of the nucleotide sequence of an RNA molecule formed during gene transcription, which includes messenger RNA (mRNA), which is a processing product of the primary transcript RNA. The target portion of the sequence will be at least long enough to serve as a substrate for RNAi-directed cleavage at or near that portion. The target sequence can be 8-30 nucleotides long (inclusive), 10-30 nucleotides long (inclusive), 12-25 nucleotides long (inclusive), 15-23 nucleotides long (inclusive), 16 - 23 nucleotides long (inclusive), or 18 - 23 nucleotides long (inclusive), including all shorter within each specified range length. In some embodiments of the invention, the target sequence is 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25 or 26 nucleosides Sour and long. In certain embodiments, the target sequence is between 9 and 26 nucleotides in length, inclusive, including all subranges and integers therebetween. For example, although not intended to be limiting, in certain embodiments of the invention, the target sequences are 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22 , 23, 24, 25, 26, 27, 28, 29 or 30 nucleotides long, the sequence is completely or at least substantially complementary to at least a portion of the RNA transcript of the C3 gene.
本發明的一些方面包括包含一種或更多種C3 dsRNA試劑和藥學上可接受的載體的藥物組合物。在本發明的某些實施方案中,如本文所述的C3 RNAi抑制C3蛋白的表達。Some aspects of the invention include pharmaceutical compositions comprising one or more C3 dsRNA agents and a pharmaceutically acceptable carrier. In certain embodiments of the invention, C3 RNAi as described herein inhibits expression of C3 protein.
本發明的一些實施方案中,藥物組合物包括一種、兩種、三種或更多種獨立的抗C3 dsRNA試劑,並且還可以包括一種或多種獨立選擇的遞送化合物。 在一些實施方案中,將能夠分別靶向C3 mRNA的一個、兩個、三個、四個或更多個不同位置/區域的兩個、三個、四個或更多個抗C3 dsRNA施用於細胞或對象中。In some embodiments of the invention, pharmaceutical compositions include one, two, three, or more independent anti-C3 dsRNA agents, and may also include one or more independently selected delivery compounds. In some embodiments, two, three, four or more anti-C3 dsRNAs capable of targeting one, two, three, four or more different positions/regions of C3 mRNA are administered to in a cell or object.
如本文所用,“dsRNA試劑”是指包含RNA或RNA樣(例如,化學修飾的RNA)寡核苷酸分子的組合物,其能夠降解或抑制靶mRNA轉錄物的翻譯。儘管不希望限於特定理論,但本發明的dsRNA試劑可通過RNA干擾機制起作用(即,通過與哺乳動物細胞的RNA干擾途徑機制(RNA誘導的沉默複合物或RISC)相互作用來誘導産生RNA干擾),或通過任何替代機制或途徑起作用。在植物、無脊椎動物和脊椎動物細胞中實現基因沉默的方法是本領域所公知的(參見例如,Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; 以及Elbashir, et al., (2001) Genes Dev. 15:188)),其各自的公開內容通過引用整體並入本文。本領域已知的基因沉默手段可與本文提供的公開內容結合使用以實現抑制C3的表達。As used herein, a "dsRNA agent" refers to a composition comprising an RNA or RNA-like (eg, chemically modified RNA) oligonucleotide molecule that is capable of degrading or inhibiting translation of a target mRNA transcript. While not wishing to be bound to a particular theory, the dsRNA agents of the present invention may act through an RNA interference mechanism (i.e., induce RNA interference by interacting with the RNA interference pathway machinery of mammalian cells (RNA-induced silencing complex or RISC) ), or act through any alternative mechanism or pathway. Methods to achieve gene silencing in plant, invertebrate and vertebrate cells are well known in the art (see, e.g., Sharp et al., Genes Dev. 2001, 15:485; Bernstein, et al., (2001) Nature 409:363; Nykanen, et al., (2001) Cell 107:309; and Elbashir, et al., (2001) Genes Dev. 15:188)), the disclosures of which are incorporated herein by reference in their entirety. Gene silencing means known in the art can be used in conjunction with the disclosure provided herein to achieve inhibition of C3 expression.
本文公開的dsRNA試劑由正義鏈和反義鏈組成,其包括但不限於:短干擾RNA(siRNA)、RNAi試劑、微RNA(miRNA)、短髮夾 RNA(shRNA)和切丁酶(Dicer)底物。本文描述的dsRNA試劑的反義鏈至少部分地與所靶向的mRNA互補,本領域能夠理解,多種長度的dsRNA雙鏈體結構可用於抑制靶基因表達。例如,已知具有19、20、21、22和23個鹼基對的雙鏈體結構的dsRNA可有效誘導RNA干擾(Elbashir et al., EMBO 2001, 20:6877-6888)。本領域還已知較短或較長的RNA雙鏈體結構也可有效誘導RNA干擾。本發明的某些實施方案中的C3 dsRNA可以包含至少一條長度至少爲21 nt的鏈,或者雙鏈體可以具有基於表1-4中任何列出的序列之一的長度減1、2、3 nt或更短的長度。與分別在表1-3中列出的dsRNA相比,在其一端或兩端減少4個核苷酸也可以是有效的。在本發明的一些實施方案中,C3 dsRNA試劑可具有來自表1-3的一個或更多個序列的至少15、16、17、18、19、20或更多個連續核苷酸的部分序列,並且它們抑制C3基因表達的能力與由包含全序列(此處也稱爲“親本”序列)的dsRNA産生的抑制水平相差不超過5%、10%、15%、20%、25%或30%。表1-3中公開的正義序列、反義序列和雙鏈體在本文中可以稱爲“親本”序列,意味著表1-3中公開的序列可以被修飾、縮短、延長、包括替換等,如本文所述,所得序列保留其親本序列在本發明的方法和組合物中的全部或至少部分功效。The dsRNA reagent disclosed herein consists of a sense strand and an antisense strand, including but not limited to: short interfering RNA (siRNA), RNAi reagents, microRNA (miRNA), short hairpin RNA (shRNA) and Dicer. substrate. The antisense strand of the dsRNA reagents described herein is at least partially complementary to the targeted mRNA, and it is understood in the art that dsRNA duplex structures of various lengths can be used to inhibit target gene expression. For example, dsRNAs with duplex structures of 19, 20, 21, 22, and 23 base pairs are known to effectively induce RNA interference (Elbashir et al., EMBO 2001, 20:6877-6888). It is also known in the art that shorter or longer RNA duplex structures are also effective in inducing RNA interference. The C3 dsRNA in certain embodiments of the invention may comprise at least one strand of at least 21 nt in length, or the duplex may have a length based on one of the sequences listed in Tables 1-4 minus 1, 2, 3 nt or shorter length. It can also be effective to reduce 4 nucleotides at one or both ends compared to the dsRNA listed in Tables 1-3 respectively. In some embodiments of the invention, the C3 dsRNA agent may have a partial sequence of at least 15, 16, 17, 18, 19, 20 or more contiguous nucleotides from one or more sequences of Tables 1-3 , and their ability to inhibit C3 gene expression does not differ by more than 5%, 10%, 15%, 20%, 25%, or 30%. The sense sequences, antisense sequences and duplexes disclosed in Tables 1-3 may be referred to as "parent" sequences herein, which means that the sequences disclosed in Tables 1-3 may be modified, shortened, extended, include substitutions, etc. , the resulting sequence retains all or at least part of the efficacy of its parent sequence in the methods and compositions of the invention, as described herein.
本發明的組合物和方法的某些實施方案在組合物中包含單鏈RNA和/或將單鏈RNA施用於對象。例如,表1-3任一項中所列的反義鏈可以作爲一種組合物或在一種組合物內,該組合物施用給對象會降低對象中C3多肽活性和/或C3基因的表達。表1-3顯示了某些C3 dsRNA試劑的反義鏈和正義鏈核心延伸鹼基序列。可以包含在本發明的某些組合物中和/或在本發明的某些方法中施用的單鏈反義分子在本文中稱爲“單鏈反義試劑”或“反義多核苷酸試劑”。可以包含在某些組合物中和/或在本發明的某些方法中施用的單鏈正義分子在本文中稱爲“單鏈正義試劑”或“正義多核苷酸試劑”。術語“鹼基序列”在本文中是指沒有化學修飾或遞送化合物的多核苷酸序列。例如,表1所示的正義鏈對應於是表3中的相應鹼基序列;但表3中的相應序列中顯示了各自的化學修飾和遞送化合物。在此公開的序列可以被分配標識符。例如,單鏈正義序列可以用“正義鏈SS#”來標識;單鏈反義序列可以用“反義鏈AS#”來標識;並且包含正義鏈和反義鏈的雙鏈體可以用“雙鏈體AD#”來標識。Certain embodiments of the compositions and methods of the present invention include single-stranded RNA in the composition and/or administer the single-stranded RNA to the subject. For example, the antisense strand listed in any of Tables 1-3 can be used as or within a composition that, when administered to a subject, reduces C3 polypeptide activity and/or expression of the C3 gene in the subject. Tables 1-3 show the antisense and sense strand core extension base sequences of some C3 dsRNA reagents. Single-stranded antisense molecules that may be included in certain compositions of the invention and/or administered in certain methods of the invention are referred to herein as "single-stranded antisense agents" or "antisense polynucleotide agents" . Single-stranded sense molecules that may be included in certain compositions and/or administered in certain methods of the invention are referred to herein as "single-stranded sense agents" or "sense polynucleotide agents." The term "base sequence" as used herein refers to a polynucleotide sequence without chemical modifications or delivery compounds. For example, the sense strand shown in Table 1 corresponds to the corresponding base sequence in Table 3; however, the corresponding sequence in Table 3 shows the respective chemical modifications and delivery compounds. Sequences disclosed herein may be assigned identifiers. For example, a single-stranded sense sequence may be identified with "sense strand SS#"; a single-stranded antisense sequence may be identified with "antisense strand AS#"; and a duplex containing a sense strand and an antisense strand may be identified with "duplex Chain AD#" to identify.
表1包括正義鏈和反義鏈,並提供了由表1中同一行上的正義鏈和反義鏈形成的雙鏈體的標識號。在本發明的某些實施方案中,反義序列在其第1位中包含核鹼基u或核鹼基a。在本發明的某些實施方案中,反義序列在反義序列的第1位包含核鹼基u。如本文所用,術語“匹配位置”在某種意義上是指當兩條鏈作爲雙鏈體時每條鏈中互相“配對”的位置。例如,在21核鹼基正義鏈和21核鹼基反義鏈中,正義鏈第1位與反義鏈第21位的核鹼基處於“匹配位置”。在另一個非限制性實例中,對於23核鹼基正義鏈和23核鹼基反義鏈,正義鏈的第2位核鹼基與反義鏈的22位處於匹配位置。在另一個非限制性實例中,在18核鹼基正義鏈和18核鹼基反義鏈中,正義鏈第1位核鹼基與反義鏈第18位核鹼基處於匹配位置;並且正義鏈中的第4位核鹼基與反義鏈中的第15位核鹼基處於匹配位置。技術人員會理解如何識別雙鏈和成對鏈的正義和反義鏈之間的匹配位置。Table 1 includes the sense and antisense strands and provides the identification number of the duplex formed by the sense and antisense strands on the same row in Table 1. In certain embodiments of the invention, the antisense sequence contains nucleobase u or nucleobase a in position 1 thereof. In certain embodiments of the invention, the antisense sequence comprises nucleobase u at position 1 of the antisense sequence. As used herein, the term "matching position" refers in a sense to a position in each strand that "pairs" with each other when the two strands act as a duplex. For example, in a 21-nucleobase sense strand and a 21-nucleobase antisense strand, the nucleobase at position 1 of the sense strand is in a "matching position" with the nucleobase at position 21 of the antisense strand. In another non-limiting example, for a 23 nucleobase sense strand and a 23 nucleobase antisense strand, nucleobase position 2 of the sense strand is in a matching position with position 22 of the antisense strand. In another non-limiting example, in the 18-nucleobase sense strand and the 18-nucleobase antisense strand, the nucleobase at position 1 of the sense strand is in a matching position with the nucleobase at position 18 of the antisense strand; and the sense strand Nucleobase 4 in the strand matches nucleobase 15 in the antisense strand. The skilled person will understand how to identify matching positions between the sense and antisense strands of duplexes and paired strands.
表1中的第一列表示雙鏈體的雙鏈體AV#,該雙鏈體在表格同一行中包含正義和反義序列。例如,表1公開了指定爲“雙鏈體AV00375”的雙鏈體,其包含相應的正義鏈序列和反義鏈序列。因此,表1中的每一行都標識了本發明的雙鏈體,每一個都包含顯示在同一行中的正義和反義序列,每個雙鏈體的指定標識符均顯示在該行的第一列中。The first column in Table 1 represents the duplex AV# of the duplex containing the sense and antisense sequences in the same row of the table. For example, Table 1 discloses a duplex designated "Duplex AV00375" which contains corresponding sense and antisense strand sequences. Thus, each row in Table 1 identifies a duplex of the invention, each containing the sense and antisense sequences shown in the same row, and the assigned identifier for each duplex is shown at the end of that row. in one column.
在本發明方法的一些實施方案中,向對象施用包含表1中所示多核苷酸序列的RNAi試劑。在本發明的一些實施方案中,向對象施用的RNAi試劑包括雙鏈體,所述雙鏈體包含表1中列出的鹼基序列中的至少一個,並包含0、1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23 或24個序列修改。在本發明方法的一些實施方案中,還包括將表1中所示多核苷酸序列的RNAi試劑連接至遞送分子上,其非限制性實例是包含GalNAc的遞送化合物。In some embodiments of the methods of the invention, an RNAi agent comprising the polynucleotide sequence set forth in Table 1 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject includes a duplex comprising at least one of the base sequences listed in Table 1 and comprising 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23 or 24 sequence modifications. In some embodiments of the method of the present invention, it is also included in linking an RNAi agent of the polynucleotide sequence shown in Table 1 to a delivery molecule, a non-limiting example of which is a delivery compound comprising GalNAc.
表1:無修飾的C3 RNAi試劑反義鏈和正義鏈序列。所有序列均顯示爲5'到3'方向。雙鏈體AV#是分配給表中同一行中兩條鏈的雙鏈體的編號。表1第三列中的“SEQ ID NO:2-74”是第二列中顯示的正義序列的序列編號,表1第五列中的“SEQ ID NO:75-147”是第四列中顯示的反義序列的序列編號。
表2顯示了本發明的某些化學修飾的C3 RNAi劑反義鏈和正義鏈序列。在本發明方法的一些實施方案中,將具有表2中所示多核苷酸序列的RNAi試劑施用於細胞和/或對象。在本發明方法的一些實施方案中,將具有表2中所示多核苷酸序列的RNAi試劑施用於對象。在本發明的一些實施方案中,向對象施用的RNAi試劑包含在表2第一列中標注的雙鏈體,並且分別包含顯示在表2中同一行第三列和第六列的正義和反義鏈序列中的序列修飾。在本發明方法的一些實施方案中,表2中所示的序列可以連接到(在本文中也稱爲“綴合到”)能夠將RNAi試劑遞送至對象的細胞和/或組織的化合物上。可用於本發明的某些實施方案中的遞送化合物的非限制性實例是含GalNAc的化合物。在表2中,第一列表示鹼基序列的雙鏈體AV#,與表1對應。對於雙鏈體AV#標識的鹼基序列,不僅顯示正義和反義鏈所包含的鹼基序列,而且具有表2同一行中所示的指定化學修飾。例如,表1第一行顯示了正義和反義鹼基單鏈序列,它們一起構成雙鏈體,標識爲:雙鏈體AV# AV00375;而表2列出的雙鏈體AV# AV00375中,作爲雙鏈體,其包含AV00375-SS和AV00375- AS的鹼基序列,而且分別包含在第三列和第六列中顯示的正義和反義序列中的化學修飾。表2第二列中的“正義鏈SS#”是同一行中第三列所示正義序列(包括修飾)的指定標識符。表2第五列中的“反義鏈AS#”是第六列中顯示的反義序列(包括修飾)的指定標識符。表2第四列中的“SEQ ID NO”是同一行中第三列所示正義序列(包括修飾)的序列編號。表2第七列中的“SEQ ID NO”是第六列中顯示的反義序列(包括修飾)的序列編號。Table 2 shows the antisense and sense strand sequences of certain chemically modified C3 RNAi agents of the invention. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 2 is administered to the cell and/or subject. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 2 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject comprises the duplexes noted in the first column of Table 2, and comprises the sense and reverse duplexes shown in the third and sixth columns of the same row in Table 2, respectively. Sequence modifications in the sense strand sequence. In some embodiments of the methods of the invention, the sequences shown in Table 2 can be linked to (also referred to herein as "conjugated to") a compound capable of delivering an RNAi agent to cells and/or tissues of a subject. Non-limiting examples of delivery compounds useful in certain embodiments of the invention are GalNAc-containing compounds. In Table 2, the first column represents the duplex AV# of the base sequence and corresponds to Table 1. For the base sequence identified by duplex AV#, not only the base sequences contained in the sense and antisense strands are shown, but also with the specified chemical modifications shown in the same row of Table 2. For example, the first row of Table 1 shows the single-stranded sequences of sense and antisense bases, which together form a duplex, identified as: duplex AV# AV00375; and in the duplex AV# AV00375 listed in Table 2, As a duplex, it contains the base sequences of AV00375-SS and AV00375-AS, and contains chemical modifications in the sense and antisense sequences shown in the third and sixth columns, respectively. The "sense strand SS#" in the second column of Table 2 is the designated identifier for the sense sequence (including modifications) shown in the third column of the same row. "Antisense Strand AS#" in the fifth column of Table 2 is the designated identifier for the antisense sequence (including modifications) shown in the sixth column. The "SEQ ID NO" in the fourth column of Table 2 is the sequence number of the sense sequence (including modifications) shown in the third column of the same row. "SEQ ID NO" in the seventh column of Table 2 is the sequence number of the antisense sequence (including modifications) shown in the sixth column.
表2:提供化學修飾的C3 RNAi試劑反義鏈和正義鏈序列。所有序列都顯示爲5'到3'。這些序列用於本文所述的某些體外測試研究。化學修飾表示爲:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:* ; UNA:開環核酸。
表3顯示了本發明的某些化學修飾的C3 RNAi試劑反義鏈和正義鏈序列。在本發明方法的一些實施方案中,將表3中所示的RNAi試劑施用於細胞和/或對象。在本發明方法的一些實施方案中,將具有表3中所示多核苷酸序列的RNAi試劑施用於對象。在本發明的一些實施方案中,向對象施用的RNAi試劑包含在表3的第一列中標識的雙鏈體,並且分別包含在表3中同一行第三列和第六列的正義和反義鏈序列中顯示的序列修飾和/或遞送化合物。該序列用於本文別處描述的某些體內測試研究。在本發明方法的一些實施方案中,表3中所示的序列可以連接到(在本文中也稱爲“綴合到”)用於遞送的化合物上,其非限制性實例是含GalNAc的化合物,即在表3中第三列的正義鏈上具有標識爲“GLX-n”的遞送化合物。遞送化合物的某些實施方案被標識爲表3中第三列有義鏈上的“GLS-5”、“GLS-15”或“GLX-n”。如本文所用和表3中所示,“GLS-5”、“GLS-15”和“GLX-n”表示含有GalNAc的化合物。如本文所用, “GLX”用於表示“GLS”或“GLO”遞送化合物(“X”可以是“S”或“O”),並且GLX-n可以是任何GLS和GLO可以在合成過程中連接到寡核苷酸 3'-或者5'-末端的遞送化合物。舉例但不局限於此:GLX-13和GLX-14可以在合成過程中連接到本發明的寡核苷酸的3'-末端;GLX-5和GLX-15可以在合成過程中連接到本發明的寡核苷酸的5'-末端。在一些實施例中,如本文所用和表3所示,“GLX-n”用於表示所連接的含GalNAc的化合物,其被代替爲化合物GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種。在一些實施中, GLX-n表示爲舉例但是不限於此現有技術中(Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961)公開的可用於所連接的含GalNAc的化合物,該化合物用於本文別處描述的某些體內測試研究。本領域技術人員將能夠製備和使用本發明的dsRNA化合物,其中附著的遞送化合物包括但是不局限於:GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、 GLS-10、GLS-11、 GLS-12、 GLS-13、GLS-14、 GLS-15、 GLS-16、 GLO-1、 GLO-2、 GLO -3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15 和 GLO-16。其中每一個的結構在本文別處提供。表3的第一列提供了分配給表中該行中的正義和反義序列的雙鏈體的雙鏈體AD#。例如,雙鏈體AD# AD00343是正義鏈AD00343-SS和反義鏈AD00343-AS構成的雙鏈體。表3中的每一行提供了一條正義鏈和一條反義鏈,並公開了所示正義鏈和反義鏈構成的雙鏈體。表3第二列中的“正義鏈SS#”是同一行第三列所示正義序列(包括修改)的指定標識符。表3第五列中的“反義鏈AS#”是第六列中顯示的反義序列(包括修飾)的指定標識符。某些所連接的含GalNAc的GLO化合物的標識符顯示爲GLX-n,並且應當理解,GLO-n或GLS-n化合物中的另一種可以替代顯示爲GLX-n的化合物,所得化合物也包括所得化合物包括在本發明的方法和/或組合物的實施方案中。表3中SEQ ID NO:294至SEQ ID NO:342、SEQ ID NO:392至SEQ ID NO:406是正義鏈的序列並且SEQ ID NO:343至SEQ ID NO:391、SEQ ID NO:407至SEQ ID NO:421是反義鏈序列。在表3中,遞送分子表示爲在正義鏈NO:294至SEQ ID NO:342、NO:392至SEQ ID NO:406的3'或者5'端的“GLS-5”、“GLS-15”或“GLX-n”。化學修飾表示爲:大寫:2'-氟;小寫:2'-甲氧基;硫代磷酸鹽:*;Invab:反向無鹼基。Table 3 shows the antisense and sense strand sequences of certain chemically modified C3 RNAi agents of the invention. In some embodiments of the methods of the invention, an RNAi agent shown in Table 3 is administered to the cell and/or subject. In some embodiments of the methods of the invention, an RNAi agent having the polynucleotide sequence set forth in Table 3 is administered to the subject. In some embodiments of the invention, the RNAi agent administered to the subject comprises a duplex identified in the first column of Table 3, and comprises the sense and reverse duplexes, respectively, in the third and sixth columns of the same row of Table 3. The sequence shown in the sense strand sequence modifies and/or delivers the compound. This sequence was used in certain in vivo testing studies described elsewhere herein. In some embodiments of the methods of the invention, the sequences shown in Table 3 can be linked (also referred to herein as "conjugated") to a compound for delivery, a non-limiting example of which is a GalNAc-containing compound , that is, there is a delivery compound identified as “GLX-n” on the sense strand in the third column of Table 3. Certain embodiments of delivery compounds are identified as "GLS-5", "GLS-15" or "GLX-n" on the sense strand in the third column of Table 3. As used herein and as shown in Table 3, "GLS-5", "GLS-15" and "GLX-n" refer to GalNAc-containing compounds. As used herein, "GLX" is used to mean a "GLS" or "GLO" delivery compound ("X" can be "S" or "O"), and GLX-n can be any GLS and GLO that can be linked during synthesis Delivery compounds to the 3'- or 5'-end of the oligonucleotide. For example but not limited to this: GLX-13 and GLX-14 can be connected to the 3'-end of the oligonucleotide of the present invention during the synthesis process; GLX-5 and GLX-15 can be connected to the present invention during the synthesis process. the 5'-end of the oligonucleotide. In some embodiments, as used herein and as shown in Table 3, "GLX-n" is used to represent an attached GalNAc-containing compound, which is replaced with compounds GLS-1, GLS-2, GLS-3, GLS- 4. GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO-3, GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO- 13. Any one of GLO-14, GLO-15 and GLO-16. In some implementations, GLX-n is shown as an example but not limited to the ones disclosed in the prior art (Jayaprakash, et al., (2014) J. Am. Chem. Soc., 136, 16958−16961) that can be used to connect GalNAc-containing compounds used in certain in vivo testing studies described elsewhere herein. One skilled in the art will be able to prepare and use the dsRNA compounds of the invention, wherein attached delivery compounds include, but are not limited to: GLS-1, GLS-2, GLS-3, GLS-4, GLS-5, GLS-6, GLS-7, GLS-8, GLS-9, GLS-10, GLS-11, GLS-12, GLS-13, GLS-14, GLS-15, GLS-16, GLO-1, GLO-2, GLO - 3. GLO-4, GLO-5, GLO-6, GLO-7, GLO-8, GLO-9, GLO-10, GLO-11, GLO-12, GLO-13, GLO-14, GLO-15 and GLO-16. The structure of each of these is provided elsewhere in this article. The first column of Table 3 provides the duplex AD# assigned to the duplexes for the sense and antisense sequences in that row of the table. For example, duplex AD# AD00343 is a duplex composed of sense strand AD00343-SS and antisense strand AD00343-AS. Each row in Table 3 provides one sense strand and one antisense strand, and discloses the duplex consisting of the indicated sense strand and antisense strand. The "sense strand SS#" in the second column of Table 3 is the designated identifier for the sense sequence (including modifications) shown in the third column of the same row. "Antisense Strand AS#" in the fifth column of Table 3 is the designated identifier for the antisense sequence (including modifications) shown in the sixth column. The identifier for certain linked GalNAc-containing GLO compounds is shown as GLX-n, and it is understood that another of the GLO-n or GLS-n compounds may be substituted for the compound shown as GLX-n and the resulting compound is also included in the Compounds are included in embodiments of the methods and/or compositions of the invention. In Table 3, SEQ ID NO:294 to SEQ ID NO:342 and SEQ ID NO:392 to SEQ ID NO:406 are the sequences of the sense strand and SEQ ID NO:343 to SEQ ID NO:391 and SEQ ID NO:407 to SEQ ID NO:421 is the antisense strand sequence. In Table 3, the delivery molecules are represented as "GLS-5", "GLS-15" or "GLS-5" at the 3' or 5' end of the sense strand NO:294 to SEQ ID NO:342, NO:392 to SEQ ID NO:406 "GLX-n". Chemical modifications are represented as: uppercase: 2'-fluoro; lowercase: 2'-methoxy; phosphorothioate: *; Invab: reverse abasic.
表3提供了用於體內測試的化學修飾的C3 RNAi試劑反義鏈和正義鏈序列。所有序列都顯示爲5'到3'。這些序列用於本文別處描述的某些體內測試研究。體內研究中使用的遞送分子在每條正義鏈5'或者3'末端表示爲“GLn-x”。化學修飾表示爲:大寫:2'-氟;小寫:2'-OMe;硫代磷酸酯:*;Invab爲“反向無鹼基”,UNA:開環核酸。
本領域技術人員已知,對於dsRNA的功效而言,錯配是可以容忍的,尤其是錯配在dsRNA的末端區域內的情况。某些錯配具有更好的耐受性,例如具有擺動鹼基對G:U和A:C的錯配對功效的耐受性更好(Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698)。本發明的方法和化合物的一些實施方案中,C3 dsRNA試劑可以含有一個或更多個與C3靶序列的錯配。在一些實施方案中,本發明的C3 dsRNA試劑不包含錯配。在某些實施方案中,本發明的C3 dsRNA試劑包含不超過1個錯配。在一些實施方案中,本發明的C3 dsRNA試劑包含不超過2個錯配。在某些實施方案中,本發明的C3 dsRNA試劑包含不超過3個錯配。在本發明的一些實施方案中,C3 dsRNA試劑的反義鏈包含與不位於互補區域中心的C3靶序列的錯配。在一些實施方案中,C3 dsRNA試劑的反義鏈包含1、2、3、4或更多個錯配,其位於互補區域的5'或3'末端之一或兩者的最末5、4、3、2或1個核苷酸內。本文所述的方法和/或本領域已知的方法可用於確定包含與C3靶序列錯配的C3 dsRNA試劑是否有效抑制C3基因的表達。 互補性 It is known to those skilled in the art that mismatches are tolerated for the efficacy of dsRNA, especially if the mismatch is within the terminal region of the dsRNA. Certain mismatches are better tolerated, such as those with wobble base pairs G:U and A:C (Du et el., A systematic analysis of the silencing effects of an active siRNA at all single-nucleotide mismatched target sites. Nucleic Acids Res. 2005 Mar 21;33(5):1671-7. Doi: 10.1093/nar/gki312. Nucleic Acids Res. 2005;33(11):3698). In some embodiments of the methods and compounds of the invention, the C3 dsRNA agent may contain one or more mismatches to the C3 target sequence. In some embodiments, the C3 dsRNA reagents of the invention contain no mismatches. In certain embodiments, C3 dsRNA reagents of the invention contain no more than 1 mismatch. In some embodiments, the C3 dsRNA reagents of the invention contain no more than 2 mismatches. In certain embodiments, C3 dsRNA reagents of the invention contain no more than 3 mismatches. In some embodiments of the invention, the antisense strand of the C3 dsRNA agent contains a mismatch to the C3 target sequence that is not centered in the complementary region. In some embodiments, the antisense strand of the C3 dsRNA agent contains 1, 2, 3, 4, or more mismatches located at the last 5, 4 of one or both of the 5' or 3' ends of the complementary region , 3, 2 or 1 nucleotide. The methods described herein and/or methods known in the art can be used to determine whether a C3 dsRNA agent comprising a mismatch to a C3 target sequence is effective in inhibiting expression of the C3 gene. complementarity
如本文所用,除非另有說明,否則術語“互補性/互補”當用於描述第一核苷酸序列(例如,C3 dsRNA試劑正義鏈或靶標C3 mRNA)與第二核苷酸序列(例如,C3 dsRNA試劑反義鏈或單鏈反義多核苷酸)的相關性時,是指包含第一核苷酸序列的寡核苷酸或多核苷酸與包含第二核苷酸序列的寡核苷酸或多核苷酸雜交[在哺乳動物生理條件(或體外類似條件)下形成鹼基對間氫鍵]、並且在某些條件下形成雙螺旋或雙螺旋結構的能力。其中也可以應用其他條件,例如在生物體內可能遇到的生理相關條件。技術人員將能夠根據雜交核苷酸的最終應用確定最適合測試兩個序列互補性的條件集。互補序列包括沃森-克裏克鹼基對或非沃森-克裏克鹼基對,並且包括天然或修飾的核苷酸或核苷酸模擬物,只要至少達到上述雜交要求的程度即可。序列同一性或互補性與修飾無關。As used herein, unless otherwise stated, the term "complementarity/complementarity" is used when describing a first nucleotide sequence (e.g., C3 dsRNA agent sense strand or target C3 mRNA) to a second nucleotide sequence (e.g., C3 dsRNA reagent antisense strand or single-stranded antisense polynucleotide) refers to an oligonucleotide or polynucleotide containing a first nucleotide sequence and an oligonucleotide containing a second nucleotide sequence. The ability of an acid or polynucleotide to hybridize [form hydrogen bonds between base pairs under mammalian physiological conditions (or similar conditions in vitro)] and, under certain conditions, to form a double helix or duplex structure. Other conditions may also apply, such as physiologically relevant conditions that may be encountered in living organisms. The skilled person will be able to determine the set of conditions most suitable for testing the complementarity of two sequences based on the ultimate application of the hybridizing nucleotides. Complementary sequences include Watson-Crick base pairs or non-Watson-Crick base pairs, and include natural or modified nucleotides or nucleotide mimetics, so long as they are at least to the extent required for hybridization as described above. . Sequence identity or complementarity is independent of modification.
例如,在如本文所述的C3 dsRNA內的互補序列包含含有第一核苷酸序列的寡核苷酸或多核苷酸與含有第二核苷酸序列的寡核苷酸或多核苷酸在一個或兩個核苷酸序列的全長上的鹼基配對。此類序列在本文中可被稱爲彼此“完全互補”。應當理解,在設計兩個寡核苷酸以在雜交時形成一個或更多個單鏈突出端的實施方案中,這種突出端在本文中不被視爲基於互補性確定的錯配。例如,C3 dsRNA試劑包含一個長度爲19個核苷酸的寡核苷酸和另一個長度爲20個核苷酸的寡核苷酸,其中較長的寡核苷酸包含與較短的寡核苷酸完全互補的19個核苷酸的序列,出於本文所述的目的,此種情况可以稱爲“完全互補”。因此,如本文所用,“完全互補”是指第一多核苷酸的連續序列中的所有(100%)鹼基會與第二多核苷酸的連續序列中的相同數目的鹼基雜交。連續序列可以包含第一或第二核苷酸序列的全部或部分。For example, a complementary sequence within a C3 dsRNA as described herein includes an oligonucleotide or polynucleotide containing a first nucleotide sequence and an oligonucleotide or polynucleotide containing a second nucleotide sequence in one or base pairing over the entire length of two nucleotide sequences. Such sequences may be referred to herein as "completely complementary" to each other. It will be understood that in embodiments where two oligonucleotides are designed to form one or more single-stranded overhangs upon hybridization, such overhangs are not considered herein to be mismatches based on complementarity. For example, the C3 dsRNA reagent contains one oligonucleotide that is 19 nucleotides in length and another oligonucleotide that is 20 nucleotides in length, with the longer oligonucleotide containing the same oligonucleotide as the shorter oligonucleotide. A sequence of 19 nucleotides whose nucleotides are completely complementary, which for the purposes described herein may be referred to as "perfectly complementary." Thus, as used herein, "perfect complementarity" means that all (100%) of the bases in the contiguous sequence of a first polynucleotide will hybridize to the same number of bases in the contiguous sequence of a second polynucleotide. The contiguous sequence may comprise all or part of the first or second nucleotide sequence.
如本文所用,術語“基本互補”是指在核鹼基序列的雜交對中,第一多核苷酸的連續序列中的鹼基的至少約85%(但不是全部)會與第二多核苷酸的連續序列中相同數目的鹼基雜交。如果兩個序列在雜交時包含一個或更多個錯配鹼基對,例如至少1、2、3、4或5個錯配鹼基對,則可以使用術語“基本上互補”來指第一序列相對於第二序列形成多達15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或30個鹼基對(bp)的雙鏈體,同時保留在與其最終應用最相關的條件下雜交的能力,例如,通過RISC途徑抑制C3基因表達。術語“部分互補”在本文中可用於指核鹼基序列的雜交對中,第一多核苷酸的連續序列中鹼基的至少75%(但不是全部)會與第二多核苷酸的連續序列中相同數目的鹼基雜交。在一些實施方案中,“部分互補”是指第一多核苷酸的連續序列中至少76%、77%、78%、79%、80%、81%、82%、83%、84%、85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%的鹼基會與第二多核苷酸的連續序列中相同數量的鹼基雜交。As used herein, the term "substantially complementary" means that in hybrid pairs of nucleobase sequences, at least about 85% (but not all) of the bases in the contiguous sequence of the first polynucleotide will be with the second polynucleotide. The same number of bases in a contiguous sequence of nucleotides hybridize. If two sequences contain one or more mismatched base pairs when hybridized, for example at least 1, 2, 3, 4 or 5 mismatched base pairs, the term "substantially complementary" may be used to refer to the first The sequence forms a duplex of up to 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 base pairs (bp) relative to the second sequence body while retaining the ability to hybridize under conditions most relevant to its end application, e.g., inhibition of C3 gene expression via the RISC pathway. The term "partially complementary" may be used herein to refer to a hybrid pair of nucleobase sequences in which at least 75% (but not all) of the bases in the contiguous sequence of a first polynucleotide will be with those of a second polynucleotide. Hybridization of the same number of bases in a contiguous sequence. In some embodiments, "partially complementary" refers to at least 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% of the bases will match the Two polynucleotides hybridize to the same number of bases in a contiguous sequence.
術語“互補”、“完全互補”、“基本互補”和“部分互補”在本文中使用時可用於指C3 dsRNA試劑的正義鏈與反義鏈之間的鹼基匹配、C3 dsRNA試劑的反義鏈與靶C3 mRNA的序列之間的鹼基匹配,或單鏈反義寡核苷酸與靶C3 mRNA序列之間的鹼基匹配。應當理解,術語“C3 dsRNA試劑的反義鏈”可以指與“C3反義多核苷酸試劑”相同的序列。The terms "complementary," "completely complementary," "substantially complementary," and "partially complementary" when used herein may be used to refer to the base matching between the sense strand and the antisense strand of the C3 dsRNA reagent, the antisense strand of the C3 dsRNA reagent A base match between the strand and the sequence of the target C3 mRNA, or a base match between a single-stranded antisense oligonucleotide and the sequence of the target C3 mRNA. It will be understood that the term "antisense strand of a C3 dsRNA agent" may refer to the same sequence as a "C3 antisense polynucleotide agent."
如本文所用,在提及核酸序列時使用的術語“基本相同”或“基本同一性”是指核酸序列與參考序列相比,包含具有至少約85%或更高序列同一性的序列,優選至少90%、至少91%、至少92%、至少93%、至少94%、至少95%、至少96%、至少97%、至少98% 或至少99 %同一性。序列同一性的百分比通過在比對窗口上比較兩個序列的最佳比對來確定。百分比是通過以下方式來計算的:確定在兩個序列中出現相同核酸鹼基的位置數以産生匹配位置的數量;將匹配位置的數量除以比對窗口中的位置總數,然後將結果乘以 100,從而得出序列同一性的百分比。本文公開的發明包括與本文公開(例如,在表 1-3 中)的那些基本相同的核苷酸序列。在一些實施方案中,所述核苷酸序列與本文公開(例如,在表1-3中)的序列完全相同,或具有至少約 85%、86%、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%或99%的同一性。As used herein, the terms "substantially identical" or "substantially identical" when referring to a nucleic acid sequence means that the nucleic acid sequence contains a sequence that has at least about 85% or greater sequence identity compared to a reference sequence, preferably at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98% or at least 99% identical. Percent sequence identity is determined by comparing the best alignment of two sequences over an alignment window. The percentage is calculated by determining the number of positions where the same nucleic acid base occurs in both sequences to yield the number of matching positions; dividing the number of matching positions by the total number of positions in the alignment window, and multiplying the result by 100, resulting in percent sequence identity. The inventions disclosed herein include nucleotide sequences that are substantially identical to those disclosed herein (eg, in Tables 1-3). In some embodiments, the nucleotide sequence is identical to, or at least about 85%, 86%, 87%, 88%, 89%, 90% identical to, a sequence disclosed herein (e.g., in Tables 1-3). %, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity.
如本文所用,術語“包含序列的鏈”是指包含核苷酸鏈的寡核苷酸,所述核苷酸鏈由使用標準核苷酸命名法指代的序列描述。如本文所用,術語“雙鏈RNA”或“dsRNA”指包含RNA分子或RNAi分子複合物的序列,所述分子或複合物具有包含兩條反向平行且基本或完全互補的核酸鏈的雜交雙鏈區,其分別被稱爲相對於靶C3 RNA 具有“正義”和“反義”方向。雙鏈區可以具有允許通過RISC途徑特異性降解靶標C3 RNA的任何所需長度,但通常長度爲9至30個鹼基對,例如長度爲15-30個鹼基對。考慮到9到30個鹼基對之間的雙鏈體,雙鏈體可以是此範圍內的任何長度,例如,9、10、11、12、13、14、15、16、17、18、19、20、21、22 、23、24、25、26、27、28、29或30個鹼基對,以及其中的任何子範圍,包括但不限於15-30個鹼基對、15-26個鹼基對;15-23鹼基對、15-22鹼基對、15-21鹼基對、15-20鹼基對、15-19鹼基對、15-18鹼基對、15-17鹼基對、18-30個鹼基對、18-26個鹼基對、18-23個鹼基對、18-22個鹼基對、18-21個鹼基對、18-20個鹼基對、19-30個鹼基對、19-26個鹼基對、19-23個鹼基對、19-22個鹼基對、19-21個鹼基對、19-20個鹼基對、20-30個鹼基對、20-26個鹼基對、20-25個鹼基對、20-24個鹼基對、20-23個鹼基對、20-22個鹼基對、20-21個鹼基對、21-30個鹼基對、21-26個鹼基對、21-25個鹼基對、21-24個鹼基對、21-23個鹼基對或21-22個鹼基對。通過用切丁酶和類似酶加工在細胞中産生的C3 dsRNA試劑的長度通常在19-22個鹼基對的範圍內。C3 dsDNA劑的雙鏈區的一條鏈包含與靶C3 RNA的區域基本互補的序列。形成雙鏈體結構的兩條鏈可以來自具有至少一個自身互補區的單個RNA分子,或者可以由兩個或更多個單獨的RNA分子形成。在雙鏈區由單個分子形成的情况下,該分子可以具有由單鏈核苷酸鏈在3'-末端的一條鏈和相應的5'-末端的另一條鏈形成的雙鏈體結構(本文稱爲“髮夾環”)。在本發明的一些實施方案中,髮夾構型包含至少1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20 個或更多個未配對的核苷酸。當C3 dsRNA試劑的基本互補的兩條鏈由單獨的 RNA 分子組成時,這些分子不需要共價連接,但也可以共價連接。當兩條鏈通過髮夾環以外的方式共價連接時,連接結構被稱爲“接頭”。術語“siRNA”在本文中也用於指如本文所述的dsRNA試劑。As used herein, the term "strand comprising a sequence" refers to an oligonucleotide comprising a strand of nucleotides described by a sequence referred to using standard nucleotide nomenclature. As used herein, the term "double-stranded RNA" or "dsRNA" refers to a sequence comprising an RNA molecule or a complex of RNAi molecules having a hybridized double-stranded nucleic acid strand comprising two antiparallel and substantially or completely complementary nucleic acid strands. Strand regions, which are referred to as having "sense" and "antisense" orientations relative to the target C3 RNA, respectively. The double-stranded region can be of any desired length that allows specific degradation of the target C3 RNA by the RISC pathway, but is typically 9 to 30 base pairs in length, for example 15-30 base pairs in length. Considering duplexes between 9 and 30 base pairs, duplexes can be any length within this range, e.g., 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 base pairs, and any subrange therein, including but not limited to 15-30 base pairs, 15-26 base pairs; 15-23 base pairs, 15-22 base pairs, 15-21 base pairs, 15-20 base pairs, 15-19 base pairs, 15-18 base pairs, 15-17 Base pairs, 18-30 base pairs, 18-26 base pairs, 18-23 base pairs, 18-22 base pairs, 18-21 base pairs, 18-20 bases pair, 19-30 base pairs, 19-26 base pairs, 19-23 base pairs, 19-22 base pairs, 19-21 base pairs, 19-20 base pairs, 20-30 base pairs, 20-26 base pairs, 20-25 base pairs, 20-24 base pairs, 20-23 base pairs, 20-22 base pairs, 20- 21 base pairs, 21-30 base pairs, 21-26 base pairs, 21-25 base pairs, 21-24 base pairs, 21-23 base pairs, or 21-22 base pairs. The length of C3 dsRNA reagents produced in cells by processing with Dicer and similar enzymes is typically in the range of 19-22 base pairs. One strand of the double-stranded region of the C3 dsDNA agent contains a sequence that is substantially complementary to a region of the target C3 RNA. The two strands forming a duplex structure can come from a single RNA molecule with at least one self-complementary region, or can be formed from two or more separate RNA molecules. In the case where the double-stranded region is formed from a single molecule, the molecule may have a duplex structure formed by one strand of the single-stranded nucleotide strand at the 3'-end and the corresponding other strand at the 5'-end (herein called a "hairpin loop"). In some embodiments of the invention, the hairpin configuration includes at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18 , 19, 20 or more unpaired nucleotides. When the two substantially complementary strands of the C3 dsRNA reagent consist of separate RNA molecules, these molecules need not be covalently linked, but may be covalently linked. When two strands are covalently connected by means other than a hairpin loop, the connecting structure is called a "linker." The term "siRNA" is also used herein to refer to a dsRNA agent as described herein.
在本發明的一些實施方案中,C3 dsRNA試劑可以包含在dsRNA試劑的一個或兩個末端具有未配對核苷酸或核苷酸類似物的正義和反義序列。沒有未配對核苷酸的末端被稱爲“平末端”並且沒有核苷酸突出端。如果dsRNA試劑的兩端都是平末端,則dsRNA被稱爲“平末端的”。在本發明的一些實施方案中,dsRNA試劑的第一末端是平末端的,在一些實施方案中,dsRNA試劑的第二末端是平末端的,並且在本發明的某些實施方案中,C3 dsRNA試劑的兩個末端都是平末端的。In some embodiments of the invention, a C3 dsRNA reagent can comprise sense and antisense sequences with unpaired nucleotides or nucleotide analogs at one or both ends of the dsRNA reagent. Ends without unpaired nucleotides are called "blunt ends" and have no nucleotide overhangs. If both ends of the dsRNA reagent are blunt-ended, the dsRNA is said to be "blunt-ended." In some embodiments of the invention, the first end of the dsRNA agent is blunt ended, in some embodiments the second end of the dsRNA agent is blunt ended, and in certain embodiments of the invention, the C3 dsRNA Both ends of the reagent are blunt-ended.
在本發明的dsRNA試劑的一些實施方案中,dsRNA不具有一個或兩個平末端。在這種情况下,在dsRNA試劑的一條鏈的末端有至少一個未配對的核苷酸。例如,當dsRNA一條鏈的3'-末端延伸超出另一條鏈的5'-末端時,則存在核苷酸突出端,反之亦然。dsRNA 可包含至少1、2、3、4、5、6 或更多個核苷酸的突出端。核苷酸突出端可包含核苷酸/核苷類似物或由其組成,包括脫氧核苷酸/核苷。應當理解,在一些實施方案中,核苷酸突出端在dsRNA試劑的正義鏈上、在dsRNA試劑的反義鏈上,或在 dsRNA 試劑的兩端,突出端的核苷酸可存在於dsRNA的反義鏈或正義鏈的 5' 端、3' 端或兩端。在本發明的某些實施方案中,突出端中的一個或更多個核苷酸被核苷硫代磷酸酯替換。In some embodiments of the dsRNA reagents of the invention, the dsRNA does not have one or two blunt ends. In this case, there is at least one unpaired nucleotide at the end of one strand of the dsRNA reagent. For example, nucleotide overhangs exist when the 3'-end of one strand of dsRNA extends beyond the 5'-end of the other strand, and vice versa. dsRNA can contain overhangs of at least 1, 2, 3, 4, 5, 6, or more nucleotides. Nucleotide overhangs may comprise or consist of nucleotide/nucleoside analogs, including deoxynucleotides/nucleosides. It will be understood that in some embodiments, the nucleotide overhangs are on the sense strand of the dsRNA reagent, on the antisense strand of the dsRNA reagent, or at both ends of the dsRNA reagent, and the nucleotides of the overhangs may be present on the antisense strand of the dsRNA reagent. sense strand or the 5' end, 3' end or both ends of the sense strand. In certain embodiments of the invention, one or more nucleotides in the overhang are replaced with nucleoside phosphorothioates.
如本文所用,術語“反義鏈”或“引導鏈”是指包含與C3靶序列基本互補的區域的C3 dsRNA試劑的鏈。如本文所用,術語“正義鏈”或“過客鏈”是指包含與C3 dsRNA試劑的反義鏈的區域基本互補的區域的C3 dsRNA試劑的鏈。 修飾 As used herein, the term "antisense strand" or "guide strand" refers to the strand of a C3 dsRNA agent that includes a region that is substantially complementary to a C3 target sequence. As used herein, the term "sense strand" or "passenger strand" refers to a strand of a C3 dsRNA agent that includes a region that is substantially complementary to a region of the antisense strand of the C3 dsRNA agent. Modify
在本發明的一些實施方案中,C3 RNAi劑的RNA被化學修飾以獲得增强的穩定性和/或一種或更多種其他有益特性。本發明的某些實施方案中的核酸可以通過本領域公知的方法合成和/或修飾,例如,見 “Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons, Inc., New York, N.Y., USA,其作爲參考在此並入本文。可以存在於本發明的C3 dsRNA試劑的某些實施方案中的修飾包括例如:(a)末端修飾,例如5'端修飾(磷酸化、綴合、反向連接等)、3'端修飾(綴合、DNA核苷酸、反向連接等);(b) 鹼基修飾,例如用穩定鹼基、去穩定鹼基或與擴展的配偶體庫進行鹼基配對的鹼基替換、缺失鹼基(無鹼基核苷酸)或綴合鹼基;(c) 糖修飾(例如,在2'位置或4'位置)或糖的替換;以及 (d) 骨架修飾,包括磷酸二酯鍵的修飾或替換。在本發明的C3 dsRNA試劑、C3反義多核苷酸和C3正義多核苷酸的某些實施方案中可用的RNA化合物的具體實例包括但不限於包含修飾骨架或沒有天然核苷間鍵聯的RNA。作爲非限制性實例,具有骨架修飾的RNA在骨架中可以不具有磷原子。在其核苷間骨架中沒有磷原子的RNA可稱爲寡核苷。在本發明的某些實施方案中,修飾的RNA在其核苷間骨架中具有磷原子。In some embodiments of the invention, the RNA of the C3 RNAi agent is chemically modified to obtain enhanced stability and/or one or more other beneficial properties. Nucleic acids in certain embodiments of the invention can be synthesized and/or modified by methods well known in the art, for example, see "Current protocols in Nucleic Acid Chemistry," Beaucage, S. L. et al. (Eds.), John Wiley & Sons , Inc., New York, N.Y., USA, which is incorporated herein by reference. Modifications that may be present in certain embodiments of the C3 dsRNA reagents of the invention include, for example: (a) terminal modifications, such as 5' end modifications (phosphorylation, conjugation, reverse ligation, etc.), 3' end modifications (conjugation; fusion, DNA nucleotides, reverse ligation, etc.); (b) base modifications, such as base replacement, missing bases with stabilizing bases, destabilizing bases or base pairing with an expanded partner library ( abasic nucleotides) or conjugated bases; (c) sugar modifications (e.g., at the 2' position or 4' position) or substitution of sugars; and (d) backbone modifications, including modification of phosphodiester bonds or Replace. Specific examples of RNA compounds useful in certain embodiments of the C3 dsRNA reagents, C3 antisense polynucleotides, and C3 sense polynucleotides of the invention include, but are not limited to, RNAs containing modified backbones or without natural internucleoside linkages. . As a non-limiting example, RNA with backbone modifications may not have phosphorus atoms in the backbone. RNA that does not have a phosphorus atom in its internucleoside backbone is called an oligonucleotide. In certain embodiments of the invention, the modified RNA has a phosphorus atom in its internucleoside backbone.
應當理解,術語“RNA分子”或“RNA”或“核糖核酸分子”不僅包括在自然界中表達或發現的RNA分子,還包括RNA的類似物和衍生物,其包含一種或更多種如本文所述或本領域已知的核糖核苷酸/核糖核苷類似物或衍生物。術語“核糖核苷”和“核糖核苷酸”在本文中可互換使用。RNA分子可以在核鹼基結構或核糖-磷酸骨架結構中進行修飾(例如,如下文所述),並且包含核糖核苷類似物或衍生物的分子必須保留形成雙鏈體的能力。作爲非限制性實例,RNA分子還可包含至少一種修飾的核糖核苷,其包括但不限於2'-O-甲基修飾的核苷、包含5'硫代磷酸酯基團的核苷、與膽固醇衍生物或十二烷酸雙癸醯胺基團相連的末端核苷、鎖核苷、無鹼基核苷、2'-脫氧-2'-氟修飾的核苷、2'-氨基修飾的核苷、2'-烷基修飾的核苷、嗎啉代核苷、氨基磷酸酯或包含核苷的非天然鹼基,或其任何組合。在本發明的一些實施方案中,RNA分子包含以下數量的修飾的核糖核苷:至少1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20或長達C3 dsRNA 試劑分子的核糖核苷的全長。對於這種RNA分子中的多個修飾的核糖核苷中的每一個,修飾不必相同。It will be understood that the term "RNA molecule" or "RNA" or "ribonucleic acid molecule" includes not only RNA molecules expressed or found in nature, but also analogs and derivatives of RNA, which include one or more species as described herein. Ribonucleotide/ribonucleoside analogs or derivatives described above or known in the art. The terms "ribonucleoside" and "ribonucleotide" are used interchangeably herein. RNA molecules may be modified in the nucleobase structure or ribose-phosphate backbone structure (eg, as described below), and molecules containing ribonucleoside analogs or derivatives must retain the ability to form duplexes. As non-limiting examples, the RNA molecule may also comprise at least one modified ribonucleoside, including, but not limited to, 2'-O-methyl modified nucleosides, nucleosides containing a 5' phosphorothioate group, and Terminal nucleosides linked to cholesterol derivatives or dodecanoic acid didecamide groups, locked nucleosides, abasic nucleosides, 2'-deoxy-2'-fluoro modified nucleosides, 2'-amino modified nucleosides Nucleosides, 2'-alkyl modified nucleosides, morpholino nucleosides, phosphoramidates, or unnatural bases containing nucleosides, or any combination thereof. In some embodiments of the invention, the RNA molecule contains the following number of modified ribonucleosides: at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 or up to the full length of the ribonucleoside of the C3 dsRNA reagent molecule. The modifications need not be the same for each of the multiple modified ribonucleosides in such an RNA molecule.
在一些實施方案中,本發明的dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸可以包含一個或更多個獨立選擇的修飾核苷酸和/或一個或更多個獨立選擇的非磷酸二酯鍵。本文所用的術語“獨立選擇”用於指選定的要素,例如修飾的核苷酸、非磷酸二酯鍵等,是指兩個或更多個選定的要素可以彼此相同但不必彼此相同。如本文所用,“核苷酸鹼基”、“核苷酸”或“核鹼基”是雜環嘧啶或嘌呤化合物,其是所有核酸的標準成分,並且包括形成核苷酸的鹼基:腺嘌呤 (a)、鳥嘌呤 (g)、胞嘧啶 (c)、胸腺嘧啶 (t) 和尿嘧啶 (u)。核鹼基可進一步修飾以包括(但不旨在限制):通用鹼基、疏水性鹼基、混雜鹼基、尺寸擴大的鹼基和氟化鹼基。術語“核糖核苷酸”或“核苷酸”在本文中可用於指未修飾的核苷酸、修飾的核苷酸或替代部分。本領域技術人員將認識到,鳥嘌呤、胞嘧啶、腺嘌呤和尿嘧啶可以被其他部分替換,而不會顯著改變包含帶有這種替換部分的核苷酸的寡核苷酸的鹼基配對特性。In some embodiments, the dsRNA reagents, C3 antisense polynucleotides and/or C3 sense polynucleotides of the invention may comprise one or more independently selected modified nucleotides and/or one or more independently selected of non-phosphodiester bonds. As used herein, the term "independently selected" is used to refer to selected elements, such as modified nucleotides, non-phosphodiester bonds, etc., meaning that two or more selected elements may be identical to each other but need not be identical to each other. As used herein, a "nucleotide base", "nucleotide" or "nucleobase" is a heterocyclic pyrimidine or purine compound that is a standard component of all nucleic acids and includes the bases that form nucleotides: adenine Purine (a), guanine (g), cytosine (c), thymine (t) and uracil (u). Nucleobases may be further modified to include, but are not intended to be limited to: universal bases, hydrophobic bases, hybrid bases, size-enlarged bases, and fluorinated bases. The term "ribonucleotide" or "nucleotide" may be used herein to refer to unmodified nucleotides, modified nucleotides, or alternative moieties. One skilled in the art will recognize that guanine, cytosine, adenine and uracil can be replaced by other moieties without significantly altering the base pairing of oligonucleotides containing nucleotides with such replaced moieties characteristic.
在一個實施方案中,預期用於本文所述的方法和組合物中的修飾的RNA是肽核酸(PNA),其具有形成所需雙鏈體結構並且允許或介導靶RNA經由RISC途徑的特異性降解的能力。在本發明的某些實施方案中,C3 RNA干擾劑包括與靶C3 RNA序列相互作用以指導靶C3 RNA切割的單鏈RNA。In one embodiment, the modified RNA contemplated for use in the methods and compositions described herein is a peptide nucleic acid (PNA) that has the specificity to form the desired duplex structure and allow or mediate the passage of the target RNA via the RISC pathway. ability to degrade. In certain embodiments of the invention, a C3 RNA interfering agent includes a single-stranded RNA that interacts with a target C3 RNA sequence to direct cleavage of the target C3 RNA.
修飾的RNA骨架可以包含例如硫代磷酸酯、手性硫代磷酸酯、二硫代磷酸酯、磷酸三酯、氨基烷基磷酸三酯、甲基和其他烷基膦酸酯(包括 3'-亞烷基膦酸酯和手性膦酸酯)、次膦酸酯、氨基磷酸酯(包括3'-氨基氨基磷酸酯和氨基烷基氨基磷酸酯)、硫代氨基磷酸酯、硫代烷基膦酸酯、硫代烷基磷酸三酯,和硼酸磷酸酯(其具有正常3'-5' 連接的,以及這些的2'-5'連接類似物,以及具有倒置極性的那些,其中相鄰的核苷單元對以3'-5'至5'-3'或2'-5'至5'-2'形式連接)。還包括各種鹽、混合鹽和游離酸形式。製備含磷鍵的方法是本領域的常規實施手段,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑、某些修飾的C3反義多核苷酸和/或某些修飾的C3正義多核苷酸。Modified RNA backbones may include, for example, phosphorothioates, chiral phosphorothioates, phosphorodithioates, phosphate triesters, aminoalkyl phosphate triesters, methyl and other alkyl phosphonates (including 3'- Alkylene phosphonates and chiral phosphonates), phosphinates, phosphoramidates (including 3'-aminophosphoramidates and aminoalkyl phosphoramidates), thiophosphates, thioalkyl Phosphonates, thioalkyl phosphate triesters, and boronic acid phosphates (which have the normal 3'-5' linkage, as well as the 2'-5' linkage analogs of these, and those with inverted polarity, where adjacent Pairs of nucleoside units are linked in a 3'-5' to 5'-3' or 2'-5' to 5'-2' format). Also included are various salts, mixed salts and free acid forms. Methods for preparing phosphorus-containing bonds are routine practices in the art, and such methods can be used to prepare certain modified C3 dsRNA reagents, certain modified C3 antisense polynucleotides, and/or certain modified C3 of the invention Sense polynucleotide.
其中不包含磷原子的修飾的RNA骨架具有由短鏈烷基或環烷基核苷間鍵聯、混合雜原子和烷基或環烷基核苷間鍵聯、或一個或更多個短鏈雜原子或雜環核苷間鍵聯形成的骨架。其包括具有嗎啉鍵的那些(部分由核苷的糖部分形成);矽氧烷骨架;硫化物、亞碸和碸骨架;甲乙醯和硫甲乙醯骨架;亞甲基甲乙醯和硫甲乙醯骨架;含有烯烴的骨架;氨基磺酸鹽骨架;亞甲基亞氨基和亞甲基肼基骨架;磺酸鹽和磺醯胺骨架;醯胺骨架;以及其他混合有N、O、S和CH 2成分的部分。製備不含磷原子的修飾的RNA骨架的方法在本領域中是常規實踐,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑、某些修飾的C3反義多核苷酸和/或某些修飾的C3正義多核苷酸。 Modified RNA backbones that do not contain a phosphorus atom have structures consisting of short-chain alkyl or cycloalkyl internucleoside linkages, mixed heteroatoms and alkyl or cycloalkyl internucleoside linkages, or one or more short chains The backbone formed by the linkages between heteroatoms or heterocyclic nucleosides. They include those with morpholine bonds (formed in part from the sugar moiety of the nucleoside); siloxane skeletons; sulfide, triacetyl and triacetyl skeletons; methylacetyl and thiomethylacetyl skeletons; methylenemethacetyl and thiomethylacetyl skeletons Skeletons; skeletons containing olefins; sulfamate skeletons; methyleneimino and methylenehydrazino skeletons; sulfonate and sulfonamide skeletons; amide skeletons; and others mixed with N, O, S and CH 2 ingredient portion. Methods of preparing modified RNA backbones that do not contain phosphorus atoms are routine practice in the art, and such methods can be used to prepare certain modified C3 dsRNA reagents, certain modified C3 antisense polynucleotides, and/or the present invention. Or certain modified C3 sense polynucleotides.
在本發明的某些實施方案中,RNA模擬物被包括在C3 dsRNA、C3反義多核苷酸和/或C3正義多核苷酸中,例如但不限於用新基團替換核苷酸單元的糖和核苷間鍵聯(即骨架)。在此類實施方案中,保持鹼基單位以與合適的C3核酸靶化合物雜交。一種這樣的寡聚化合物(已被證明具有優異雜交特性的RNA模擬物),被稱爲肽核酸(PNA)。在PNA化合物中,RNA 的糖骨架被含有醯胺的骨架,特別是氨乙基甘氨酸骨架取代。核鹼基被保留並直接或間接地與骨架醯胺部分的氮雜氮原子結合。製備RNA模擬物的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑。In certain embodiments of the invention, RNA mimetics are included in C3 dsRNA, C3 antisense polynucleotides, and/or C3 sense polynucleotides, such as, but not limited to, sugars that replace nucleotide units with new groups. and internucleoside linkages (i.e. backbone). In such embodiments, base units are maintained for hybridization to the appropriate C3 nucleic acid target compound. One such oligomeric compound, an RNA mimetic that has been shown to have excellent hybridization properties, is called a peptide nucleic acid (PNA). In PNA compounds, the sugar backbone of RNA is replaced by an amide-containing backbone, specifically an aminoethylglycine backbone. The nucleobase is retained and bound directly or indirectly to the aza nitrogen atom of the amide moiety of the backbone. Methods of preparing RNA mimetics are routinely practiced in the art, and such methods can be used to prepare certain modified C3 dsRNA agents of the invention.
本發明的一些實施方案包括具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷,特別是-CH 2-NH-CH 2-、-CH 2-N(CH 3)-O-CH 2-[稱爲亞甲基(甲基亞氨基)或 MMI 骨架]、-CH 2-O-N(CH 3)-CH 2-、-CH 2-N(CH 3)-N(CH 3)-CH 2-以及-N(CH 3)-CH 2-[其中天然磷酸二酯骨架表示爲-O-P-O-CH 2-]。製備具有硫代磷酸酯骨架的RNA和具有雜原子骨架的寡核苷的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑、某些C3反義多核苷酸和/或某些C3正義多核苷酸。 Some embodiments of the invention include RNAs with phosphorothioate backbones and oligonucleosides with heteroatom backbones, particularly -CH2- NH- CH2- , -CH2 -N( CH3 )-O-CH 2 -[called methylene (methylimino) or MMI skeleton], -CH 2 -ON(CH 3 )-CH 2 -, -CH 2 -N(CH 3 )-N(CH 3 )-CH 2 - and -N(CH 3 )-CH 2 - [where the natural phosphodiester backbone is represented as -OPO-CH 2 -]. Methods for preparing RNAs with phosphorothioate backbones and oligonucleotides with heteroatom backbones are routinely practiced in the art, and such methods can be used to prepare certain modified C3 dsRNA reagents, certain C3 antisenses of the invention polynucleotides and/or certain C3 sense polynucleotides.
修飾的RNA還可以包含一個或更多個取代的糖部分。本發明的C3 dsRNA、C3 反義多核苷酸和/或C3 正義多核苷酸可在2'位置包含以下之一:OH;F;O-、-S-、或N-烷基;O-、-S-或N-烯基;O-、-S-或N-炔基;或O-烷基-O-烷基,其中烷基、烯基和炔基可以是取代或未取代的C 1至C 10烷基或C 2至C 10烯基和炔基。示例性的合適的修飾包括:O[(CH 2) nO] mCH 3、O(CH 2) nOCH 3、O(CH 2) nNH 2、O(CH 2) nCH 3、O(CH 2) nONH 2、以及O(CH 2) nON[(CH 2) nCH 3)] 2,其中n和m爲1至約10。在其他實施方案中,dsRNA在2'位置包括以下之一:C 1至C 10低級烷基、取代的低級烷基、烷芳基、芳烷基、O-烷芳基或O-芳烷基、SH、SCH 3、OCN、Cl、Br、CN、CF 3、OCF 3、SOCH 3、SO 2CH 3、ONO 2、NO 2、N 3、NH 2、雜環烷基、雜環烷芳基、氨基烷基氨基、聚烷基氨基;取代的甲矽烷基、RNA 裂解基團、報告基團、嵌入劑;用於改善C3 dsRNA試劑的藥代動力學特性的基團;或用於改善C3 dsRNA 試劑、C3 反義多核苷酸和/或C3正義多核苷酸的藥效學特性的基團,和其他具有類似性質的取代基。在一些實施方案中,修飾包括2'-甲氧基乙氧基(2'-O-CH 2CH 2OCH 3,也稱爲2'-O-(2-甲氧基乙基)或2'-MOE)(Martin et al., Helv. Chim. Acta, 1995, 78:486-504),即烷氧基-烷氧基。另一種示例性修飾是2'-二甲氨基乙氧基乙氧基,即O(CH 2) 2ON(CH 3) 2基團,也稱爲 2'-DMAOE,如下文實施例中所述;以及2'-二甲氨基乙氧基乙氧基(在本領域中也稱爲 2'-O-二甲氨基乙氧基乙基或2'-DMAEOE)。製備所描述的那些的修飾RNA的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑。 Modified RNA may also contain one or more substituted sugar moieties. The C3 dsRNA, C3 antisense polynucleotide and/or C3 sense polynucleotide of the present invention may contain one of the following at the 2' position: OH; F; O-, -S-, or N-alkyl; O-, -S- or N-alkenyl; O-, -S- or N-alkynyl; or O-alkyl-O-alkyl, where alkyl, alkenyl and alkynyl may be substituted or unsubstituted C 1 to C 10 alkyl or C 2 to C 10 alkenyl and alkynyl. Exemplary suitable modifications include: O[(CH 2 ) n O] m CH 3 , O(CH 2 ) n OCH 3 , O(CH 2 ) n NH 2 , O( CH 2 ) n CH 3 , O( CH 2 ) n ONH 2 , and O(CH 2 ) n ON [(CH 2 ) n CH 3 )] 2 , where n and m range from 1 to about 10. In other embodiments, the dsRNA includes one of the following at the 2' position: C 1 to C 10 lower alkyl, substituted lower alkyl, alkaryl, aralkyl, O-alkaryl, or O-aralkyl , SH, SCH 3 , OCN, Cl, Br, CN, CF 3 , OCF 3 , SOCH 3 , SO 2 CH 3 , ONO 2 , NO 2 , N 3 , NH 2 , heterocycloalkyl, heterocycloalkaryl , aminoalkylamino, polyalkylamino; substituted silyl group, RNA cleavage group, reporter group, intercalator; groups used to improve the pharmacokinetic properties of C3 dsRNA reagents; or used to improve C3 groups with pharmacodynamic properties of dsRNA reagents, C3 antisense polynucleotides and/or C3 sense polynucleotides, and other substituents with similar properties. In some embodiments, modifications include 2'-O-CH 2 CH 2 OCH 3 , also known as 2'-O-(2-methoxyethyl) or 2' -MOE) (Martin et al., Helv. Chim. Acta, 1995, 78:486-504), that is, alkoxy-alkoxy group. Another exemplary modification is 2'-dimethylaminoethoxyethoxy, the O( CH2 ) 2ON ( CH3 ) 2 group, also known as 2'-DMAOE, as described in the Examples below ; and 2'-dimethylaminoethoxyethoxy (also known in the art as 2'-O-dimethylaminoethoxyethyl or 2'-DMAEOE). Methods of preparing modified RNAs such as those described are routinely practiced in the art, and such methods may be used to prepare certain modified C3 dsRNA agents of the invention.
其他修飾包括 2'-甲氧基(2'-OCH 3)、2'-氨基丙氧基 (2'-OCH 2CH 2CH 2NH 2)和2'-氟(2'-F)。類似的修飾也可以在本發明的C3 dsRNA 試劑、C3 反義多核苷酸的RNA上的其他位置、C3正義多核苷酸和/或C3正義多核苷酸的其他位置,特別是3'末端核苷酸上或2'-5'連接的C3 dsRNA、C3反義多核苷酸或C3正義多核苷酸中的糖的3'位置、和5'末端核苷酸的5'位置進行。C3 dsRNA 試劑、C3 反義多核苷酸和/或C3正義多核苷酸也可以具有糖模擬物,例如代替呋喃戊糖的環丁基部分。製備例如所描述的那些的修飾RNA的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸。 Other modifications include 2'-methoxy (2'-OCH 3 ), 2'-aminopropoxy (2'-OCH 2 CH 2 CH 2 NH 2 ), and 2'-fluoro (2'-F). Similar modifications may also be made at other positions on the C3 dsRNA reagents of the invention, the RNA of the C3 antisense polynucleotide, the C3 sense polynucleotide and/or other positions of the C3 sense polynucleotide, particularly the 3' terminal nucleoside The 3' position of the sugar on the acid or 2'-5' linked C3 dsRNA, C3 antisense polynucleotide, or C3 sense polynucleotide, and the 5' position of the 5' terminal nucleotide. The C3 dsRNA reagent, C3 antisense polynucleotide, and/or C3 sense polynucleotide may also have a sugar mimetic, such as a cyclobutyl moiety in place of the pentofuranose. Methods of preparing modified RNAs such as those described are routinely practiced in the art, and such methods can be used to prepare certain modified C3 dsRNA agents, C3 antisense polynucleotides and/or C3 sense polynucleotides of the invention .
在一些實施方案中,C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸可以包括核鹼基(在本領域中通常簡稱爲“鹼基”)修飾或取代。如本文所用,“未修飾的”或“天然”核鹼基包括嘌呤鹼基腺嘌呤(A)和鳥嘌呤(G),以及嘧啶鹼基胸腺嘧啶(T)、胞嘧啶(C)和尿嘧啶(U)。修飾的核鹼基包括其他合成和天然核鹼基,例如 5-甲基胞嘧啶(5-me-C)、5-羥甲基胞嘧啶、黃嘌呤、次黃嘌呤、2-氨基腺嘌呤、6-甲基和其他腺嘌呤和鳥嘌呤的烷基衍生物、2-丙基和其他腺嘌呤和鳥嘌呤的烷基衍生物、2-硫尿嘧啶、2-硫胸腺嘧啶和2-硫胞嘧啶、5-鹵尿嘧啶和胞嘧啶、5-丙炔基尿嘧啶和胞嘧啶、6-偶氮尿嘧啶、胞嘧啶和胸腺嘧啶、5-尿嘧啶(假尿嘧啶)、4-硫尿嘧啶;8-鹵代、8-氨基、8-硫醇、8-硫代烷基、8-羥基以及其他8-取代的腺嘌呤和鳥嘌呤;5-鹵代,特別是5-溴、5-三氟甲基和其他5-取代的尿嘧啶和胞嘧啶;7-甲基鳥嘌呤和7-甲基腺嘌呤、8-氮雜鳥嘌呤和8-氮雜腺嘌呤、7-氮雜鳥嘌呤和7-氮雜腺嘌呤以及3-氮雜鳥嘌呤和3-氮雜腺嘌呤。可以包含在本發明的C3 dsRNA試劑的某些實施方案中的另外的核鹼基是本領域已知的,參見例如:Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P. Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991, 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993。製備包含核鹼基修飾和/或取代的dsRNA、C3反義鏈多核苷酸和/或C3正義鏈多核苷酸(例如本文所述的那些)的方法是本領域常規實踐的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑、C3正義多核苷酸和/或C3反義多核苷酸。In some embodiments, C3 dsRNA agents, C3 antisense polynucleotides, and/or C3 sense polynucleotides can include nucleobase (often referred to as "bases" in the art) modifications or substitutions. As used herein, "unmodified" or "natural" nucleobases include the purine bases adenine (A) and guanine (G), and the pyrimidine bases thymine (T), cytosine (C), and uracil (U). Modified nucleobases include other synthetic and natural nucleobases, such as 5-methylcytosine (5-me-C), 5-hydroxymethylcytosine, xanthine, hypoxanthine, 2-aminoadenine, 6-Methyl and other alkyl derivatives of adenine and guanine, 2-propyl and other alkyl derivatives of adenine and guanine, 2-thiouracil, 2-thiothymine and 2-thiocytosan Pyrimidine, 5-halouracil and cytosine, 5-propynyluracil and cytosine, 6-azouracil, cytosine and thymine, 5-uracil (pseudouracil), 4-thiouracil ; 8-halo, 8-amino, 8-thiol, 8-thioalkyl, 8-hydroxy and other 8-substituted adenine and guanine; 5-halo, especially 5-bromo, 5- Trifluoromethyl and other 5-substituted uracil and cytosine; 7-methylguanine and 7-methyladenine, 8-azaguanine and 8-azaadenine, 7-azaguanine and 7-azaadenine and 3-azaguanine and 3-azaadenine. Additional nucleobases that may be included in certain embodiments of the C3 dsRNA reagents of the invention are known in the art, see, for example: Modified Nucleosides in Biochemistry, Biotechnology and Medicine, Herdewijn, P. Ed. Wiley-VCH, 2008; The Concise Encyclopedia Of Polymer Science And Engineering, pages 858-859, Kroschwitz, J. L, Ed. John Wiley & Sons, 1990, English et al., Angewandte Chemie, International Edition, 1991, 30, 613, Sanghvi, Y S., Chapter 15, dsRNA Research and Applications, pages 289-302, Crooke, S. T. and Lebleu, B., Ed., CRC Press, 1993. Methods of preparing dsRNA, C3 antisense strand polynucleotides, and/or C3 sense strand polynucleotides (such as those described herein) comprising nucleobase modifications and/or substitutions are routinely practiced in the art, and such methods Certain modified C3 dsRNA reagents, C3 sense polynucleotides and/or C3 antisense polynucleotides can be used to prepare the present invention.
本發明的C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸的某些實施方案包括經修飾以包括一種或更多種鎖核酸(LNA)的RNA。鎖核酸是具有這樣的修飾核糖部分的核苷酸,其包含額外的連接2'和4'碳的橋。這種結構有效地將核糖“鎖定”在 3'-內結構構象中。在本發明的C3 dsRNA 試劑、C3 反義多核苷酸和/或C3正義多核苷酸中添加鎖核酸可以增加血清中的穩定性,並減少脫靶效應(Elmen, J. et al., (2005) Nucleic Acids Research 33(1):439-447; Mook, O R. et al., (2007)Mol Canc Ther 6(3):833-843; Grunweller, A. et al., (2003) Nucleic Acids Research 31(12):3185-3193)。製備包含鎖核酸的dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸的方法是本領域常規實施的,並且此類方法可用於製備本發明的某些修飾的C3 dsRNA試劑。本發明的C3 dsRNA化合物、正義多核苷酸和/或反義多核苷酸的某些實施方案包括至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包含:2'-O-甲基核苷酸、2'-氟核苷酸、2'-脫氧核苷酸、2',3'-seco 核苷酸模擬物、鎖核苷酸、2'-F-阿拉伯糖核苷酸、2'-甲氧基乙基核苷酸、2'-氨基修飾的核苷酸、2'-烷基修飾的核苷酸、嗎啉代核苷酸和3'-Ome核苷酸、包含 5'-硫代磷酸酯基團的核苷酸,或與膽固醇衍生物或十二烷酸雙癸醯胺基團連接的末端核苷酸、2'-氨基修飾的核苷酸、氨基磷酸酯或包含核苷酸的非天然鹼基。在一些實施方案中,C3 dsRNA化合物在反義鏈(在本文中也稱爲引導鏈)的5’末端處包含E-乙烯基膦酸酯核苷酸。Certain embodiments of the C3 dsRNA reagents, C3 antisense polynucleotides, and/or C3 sense polynucleotides of the invention include RNA modified to include one or more locked nucleic acids (LNA). Locked nucleic acids are nucleotides with a modified ribose moiety that contains an additional bridge connecting the 2' and 4' carbons. This structure effectively "locks" ribose in the 3'-endostructural conformation. Adding locked nucleic acid to the C3 dsRNA reagent, C3 antisense polynucleotide and/or C3 sense polynucleotide of the present invention can increase the stability in serum and reduce off-target effects (Elmen, J. et al., (2005) Nucleic Acids Research 33(1):439-447; Mook, O R. et al., (2007) Mol Canc Ther 6(3):833-843; Grunweller, A. et al., (2003) Nucleic Acids Research 31(12):3185-3193). Methods of preparing dsRNA reagents, C3 antisense polynucleotides, and/or C3 sense polynucleotides containing locked nucleic acids are routinely practiced in the art, and such methods may be used to prepare certain modified C3 dsRNA reagents of the invention. Certain embodiments of the C3 dsRNA compounds, sense polynucleotides and/or antisense polynucleotides of the invention include at least one modified nucleotide, wherein the at least one modified nucleotide comprises: 2'-O- Methyl nucleotides, 2'-fluoro nucleotides, 2'-deoxy nucleotides, 2',3'-seco nucleotide mimetics, locked nucleotides, 2'-F-arabinose nucleotides , 2'-methoxyethyl nucleotide, 2'-amino modified nucleotide, 2'-alkyl modified nucleotide, morpholino nucleotide and 3'-Ome nucleotide, including Nucleotides with a 5'-phosphorothioate group, or terminal nucleotides linked to cholesterol derivatives or didecylamide dodecanoate groups, 2'-amino modified nucleotides, phosphoramidates or contain unnatural bases of nucleotides. In some embodiments, the C3 dsRNA compound contains an E-vinylphosphonate nucleotide at the 5' end of the antisense strand (also referred to herein as the guide strand).
本發明的某些實施方案中,在C3 dsRNA化合物、正義多核苷酸的3'和5'末端和/或反義多核苷酸的3'末端包含至少一種修飾的核苷酸,其中至少一種修飾的核苷酸包括:無鹼基核苷酸、核糖醇、反向核苷酸、反向無鹼基核苷酸、反向2'-OMe核苷酸、反向2'-脫氧核苷酸。本領域技術人員已知,在寡核苷酸末端包含無鹼基或反向無鹼基核苷酸可增强穩定性 (Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res. 2003;31(11):2705-2716. doi:10.1093/nar/gkg393)。In certain embodiments of the invention, at least one modified nucleotide is included at the 3' and 5' ends of the C3 dsRNA compound, the sense polynucleotide, and/or the 3' end of the antisense polynucleotide, wherein at least one modification The nucleotides include: abasic nucleotides, ribitol, reverse nucleotides, reverse abasic nucleotides, reverse 2'-OMe nucleotides, reverse 2'-deoxy nucleotides . It is known to those skilled in the art that the inclusion of abasic or reverse abasic nucleotides at the termini of oligonucleotides can enhance stability (Czauderna et al. Structural variations and stabilizing modifications of synthetic siRNAs in mammalian cells. Nucleic Acids Res . 2003;31(11):2705-2716. doi:10.1093/nar/gkg393).
本發明的某些實施方案中,C3 dsRNA化合物、反義多核苷酸包含至少一種修飾的核苷酸,其中所述至少一種修飾的核苷酸包含開環核酸核苷酸(UNA)或/和二醇核酸核苷酸(GNA)。本領域技術人員已知,UNA和GNA是熱不穩定化學修飾,可以顯著改善siRNA化合物的脫靶譜 (Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun. 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010;6:862–70)。In certain embodiments of the invention, C3 dsRNA compounds, antisense polynucleotides comprise at least one modified nucleotide, wherein the at least one modified nucleotide comprises open nucleic acid nucleotides (UNA) or/and Glycol nucleic acid nucleotides (GNA). Those skilled in the art know that UNA and GNA are thermally unstable chemical modifications that can significantly improve the off-target profile of siRNA compounds (Janas, et al., Selection of GalNAc-conjugated siRNAs with limited off-target-driven rat hepatotoxicity. Nat Commun 2018;9(1):723. doi:10.1038/s41467-018-02989-4; Laursen et al., Utilization of unlocked nucleic acid (UNA) to enhance siRNA performance in vitro and in vivo. Mol BioSyst. 2010; 6:862–70).
在某些實施方案中,本發明關於用於治療的開環核酸(UNA)寡聚體。開環核酸(unlocked nucleic acid,UNA)是RNA的無環類似物,其中核糖環的C2'和C3'原子之間的鍵已被切斷。已經證明,摻入UNA對 siRNA基因沉默活性具有良好的耐受性,在某些情况下甚至可以增强其活性(Meghan A. et al. “Locked vs. unlocked nucleic acids (LNA vs. UNA): contrasting structures work towards common therapeutic goals”. Chem. Soc. Rev., 2011, 40, 5680–5689 )。 In certain embodiments, the invention relates to open nucleic acid (UNA) oligomers for use in therapy. Unlocked nucleic acid (UNA) is an acyclic analog of RNA in which the bond between the C2' and C3' atoms of the ribose ring has been severed. It has been shown that incorporation of UNA is well tolerated by siRNA gene silencing activity and in some cases can even enhance its activity (Meghan A. et al. “Locked vs. unlocked nucleic acids (LNA vs. UNA): contrasting structures work towards common therapeutic goals”. Chem. Soc. Rev., 2011, 40 , 5680–5689 ).
UNA是一種熱不穩定修飾,用UNA替換核糖核苷酸會降低鹼基配對强度和雙鏈體穩定性。將UNA策略性地放置在siRNA反義鏈的種子區域可以降低通過microRNA (miRNA)介導的基因沉默機制中的脫靶活性。miRNA主要通過反義種子區(從5'端開始的第2-8位)與靶mRNA之間的鹼基配對來識別靶基因,以進行基因抑制。每個miRNA都可能調節大量基因。RNA誘導沉默複合物(RISC)所加載的siRNA反義鏈也可以通過miRNA介導的機制潜在地調節大量非預期基因。因此,在siRNA的種子區域中加入熱不穩定的核苷酸,如UNA,可以降低脫靶活性(Lam JK, Chow MY, Zhang Y, Leung SW. siRNA Versus miRNA as Therapeutics for Gene Silencing. Mol Ther Nucleic Acids. 2015 Sep 15;4(9):e252. doi: 10.1038/mtna.2015.23. PMID: 26372022; PMCID: PMC4877448.)。具體而言,這樣的RNA寡核苷酸或RNA寡核苷酸的複合物在種子區域含有至少一個UNA核苷酸單體(Narendra Vaish et al. “Improved specificity of gene silencing by siRNAs containing unlocked nucleobase analog”. Nucleic Acids Research, 2011, Vol. 39, No. 5 1823–1832)。 UNA is a heat-labile modification, and replacing ribonucleotides with UNA will reduce base pairing strength and duplex stability. Strategic placement of UNA in the seed region of the siRNA antisense strand can reduce off-target activity in gene silencing mechanisms mediated by microRNA (miRNA). miRNA mainly recognizes the target gene through base pairing between the antisense seed region (positions 2-8 starting from the 5' end) and the target mRNA for gene suppression. Each miRNA has the potential to regulate a large number of genes. The siRNA antisense strand loaded by the RNA-induced silencing complex (RISC) can also potentially regulate a large number of unintended genes through a miRNA-mediated mechanism. Therefore, adding thermally unstable nucleotides, such as UNA, to the seed region of siRNA can reduce off-target activity (Lam JK, Chow MY, Zhang Y, Leung SW. siRNA Versus miRNA as Therapeutics for Gene Silencing. Mol Ther Nucleic Acids . 2015 Sep 15;4(9):e252. doi: 10.1038/mtna.2015.23. PMID: 26372022; PMCID: PMC4877448.). Specifically, such RNA oligonucleotides or complexes of RNA oligonucleotides contain at least one UNA nucleotide monomer in the seed region (Narendra Vaish et al. “Improved specificity of gene silencing by siRNAs containing unlocked nucleobase analog ”. Nucleic Acids Research, 2011, Vol. 39, No. 5 1823–1832 ).
根據本技術方案,在RNA寡核苷酸或RNA寡核苷酸的複合物中並入UNA的潜在優勢包括但不限於:According to this technical solution, potential advantages of incorporating UNA in RNA oligonucleotides or complexes of RNA oligonucleotides include, but are not limited to:
1. 減少脫靶活性。在siRNA種子區添加UNA會降低種子區的鹼基配對强度,從而降低由micro-RNA機制引起的潜在脫靶活性。1. Reduce off-target activity. Adding UNA to the siRNA seed region will reduce the base pairing strength of the seed region, thereby reducing potential off-target activity caused by the micro-RNA mechanism.
2. UNA在siRNA活性方面具有良好的耐受性。在某些情况下,UNA 可以導致活性增强。2. UNA is well tolerated in terms of siRNA activity. In some cases, UNA can lead to increased activity.
可用於本技術方案的示例性UNA單體包括但不限於: 。 Exemplary UNA monomers that can be used in this technical solution include, but are not limited to: .
Invab是反向無鹼基(脫氧核糖)殘基。例如,在一些實施方案中,Invab:在一些實施方案中,有義鏈或反義鏈可包括“末端帽”,其如本文所用是可以在本文公開的RNAi試劑的鏈的一個或多個末端處並入的非核苷酸化合物或其他部分,並且在一些情况下可以爲RNAi試劑提供某些有利特性,諸如例如針對核酸外切酶降解的保護。在一些實施方案中,反向無鹼基殘基(Invab)作爲末端帽添加 (參見,例如F. Czauderna, Nucleic Acids Res., 2003,31(11),2705-16)。末端帽通常是本領域中已知的,在一些實施方案中,末端帽存在於有義鏈的5'末端處、3'末端處或5'和3'末端兩者處。 Invab is the reverse abasic (deoxyribose) residue. For example, in some embodiments, Invab: In some embodiments, the sense or antisense strand can include a "terminal cap," which as used herein is one or more ends of a strand of an RNAi agent disclosed herein. non-nucleotide compounds or other moieties incorporated therein, and in some cases may provide certain advantageous properties to the RNAi agent, such as, for example, protection against exonuclease degradation. In some embodiments, an inverted abasic residue (Invab) is added as a terminal cap (see, eg, F. Czauderna, Nucleic Acids Res., 2003, 31(11), 2705-16). Terminal caps are generally known in the art and, in some embodiments, are present at the 5' end, the 3' end, or both the 5' and 3' ends of the sense strand.
可以在本發明的某些實施方案的C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸的RNA中包含另一種修飾,其包括分別增强C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸的一種或更多種特徵的一種或更多種配體、部分或與RNA化學連接的綴合物。可以增强的特徵的非限制性實例是:C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸活性、細胞分布、C3 dsRNA 試劑的遞送、C3 dsRNA 試劑的藥代動力學特性以及 C3 dsRNA 試劑的細胞攝取。在本發明的一些實施方案中,C3 dsRNA試劑包含一個或更多個靶向基團或連接基團,在本發明的C3 dsRNA試劑的某些實施方案中,其與正義鏈綴合。靶向基團的非限制性實例是包含N-乙醯基-半乳糖胺(GalNAc)的化合物。術語“靶向基團”、“靶向劑”、“連接劑”、“靶向化合物”和“靶向配體”在本文中可互換使用。在本發明的某些實施方案中,C3 dsRNA試劑包含與正義鏈的5'-末端綴合的靶向化合物。在本發明的某些實施方案中,C3 dsRNA試劑包含與正義鏈的3'-末端綴合的靶向化合物。在本發明的一些實施方案中,C3 dsRNA試劑包含含有GalNAc的靶向基團。 在本發明的某些實施方案中,C3 dsRNA試劑不包含與正義鏈的3'-末端和5'-末端之一或兩者綴合的靶向化合物。在本發明的某些實施方案中,C3 dsRNA試劑不包含與正義鏈的5'-末端和3'-末端之一或兩者綴合的含有GalNAc的靶向化合物。Another modification may be included in the RNA of the C3 dsRNA agent, C3 antisense polynucleotide, and/or C3 sense polynucleotide of certain embodiments of the invention, including enhancing the C3 dsRNA agent, C3 antisense polynucleotide, respectively. and/or one or more ligands, moieties, or conjugates chemically linked to RNA of one or more features of the C3 sense polynucleotide. Non-limiting examples of characteristics that can be enhanced are: C3 dsRNA agent, C3 antisense polynucleotide and/or C3 sense polynucleotide activity, cellular distribution, delivery of the C3 dsRNA agent, pharmacokinetic properties of the C3 dsRNA agent, and Cellular uptake of C3 dsRNA reagent. In some embodiments of the invention, the C3 dsRNA reagents comprise one or more targeting or linking groups, which, in certain embodiments of the invention, are conjugated to the sense strand. Non-limiting examples of targeting groups are compounds containing N-acetyl-galactosamine (GalNAc). The terms "targeting group", "targeting agent", "linker", "targeting compound" and "targeting ligand" are used interchangeably herein. In certain embodiments of the invention, the C3 dsRNA agent comprises a targeting compound conjugated to the 5'-end of the sense strand. In certain embodiments of the invention, the C3 dsRNA agent comprises a targeting compound conjugated to the 3'-end of the sense strand. In some embodiments of the invention, the C3 dsRNA agent comprises a GalNAc-containing targeting group. In certain embodiments of the invention, the C3 dsRNA agent does not comprise a targeting compound conjugated to one or both of the 3'-end and 5'-end of the sense strand. In certain embodiments of the invention, the C3 dsRNA agent does not comprise a GalNAc-containing targeting compound conjugated to one or both of the 5'-end and the 3'-end of the sense strand.
另外的靶向和連接劑是本領域衆所周知的,例如,可用於本發明的某些實施方案中的靶向和連接劑包括但不限於脂質部分,例如膽固醇部分 (Letsinger et al., Proc. Natl. Acid. Sci. USA, 1989, 86: 6553-6556)、膽酸 (Manoharan et al., Biorg. Med. Chem. Let., 1994, 4:1053-1060)、硫醚,例如beryl-S-三苯甲基硫醇(Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660:306-309; Manoharan et al., Biorg. Med. Chem. Let., 1993, 3:2765-2770)、硫膽固醇(Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538)、脂肪鏈,例如十二烷二醇或十一烷基殘基(Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54)、磷脂,例如二-十六烷基-rac-甘油或三乙基-銨1,2-二-O-十六烷基-rac-甘油-3-膦酸酯(Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654; Shea et al., Nucl. Acids Res., 1990, 18:3777-3783)、聚胺或聚乙二醇鏈(Manoharan et al., Nucleosides & Nucleotides, 1995, 14:969-973)或金剛烷乙酸(Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654)、棕櫚醯部分(Mishra et al., Biochim. Biophys. Acta, 1995, 1264:229-237)或十八胺或己氨基-羰氧基膽固醇部分(Crooke et al., J. Pharmacol. Exp. Ther., 1996, 277:923-937)。Additional targeting and linking agents are well known in the art and, for example, targeting and linking agents useful in certain embodiments of the present invention include, but are not limited to, lipid moieties such as cholesterol moieties (Letsinger et al., Proc. . Natl. Acid. Sci. USA, 1989, 86: 6553-6556), cholic acid (Manoharan et al., Biorg. Med. Chem. Let., 1994, 4:1053-1060), thioethers, such as beryl- S-Tritylmercaptan (Manoharan et al., Ann. N.Y. Acad. Sci., 1992, 660:306-309; Manoharan et al., Biog. Med. Chem. Let., 1993, 3:2765- 2770), thiocholesterol (Oberhauser et al., Nucl. Acids Res., 1992, 20:533-538), aliphatic chains such as dodecanediol or undecyl residues (Saison-Behmoaras et al., EMBO J, 1991, 10:1111-1118; Kabanov et al., FEBS Lett., 1990, 259:327-330; Svinarchuk et al., Biochimie, 1993, 75:49-54), phospholipids, such as di- Hexadecyl-rac-glycerol or triethylammonium 1,2-di-O-hexadecyl-rac-glycerol-3-phosphonate (Manoharan et al., Tetrahedron Lett., 1995, 36:3651 -3654; Shea et al., Nucl. Acids Res., 1990, 18:3777-3783), polyamine or polyethylene glycol chains (Manoharan et al., Nucleosides & Nucleotides, 1995, 14:969-973) or Adamantane acetic acid (Manoharan et al., Tetrahedron Lett., 1995, 36:3651-3654), palmitate moiety (Mishra et al., Biochim. Biophys. Acta, 1995, 1264:229-237) or octadecylamine or Hexamino-carbonyloxycholesterol moiety (Crooke et al., J. Pharmacol. Exp. Ther., 1996, 277:923-937).
包含C3 dsRNA試劑、C3反義多核苷酸和/或C3正義多核苷酸的組合物的某些實施方案可包含改變C3 dsRNA試劑的分布、靶向等性質的配體。在包含本發明的C3 dsRNA試劑的組合物的一些實施方案中,例如與不存在此類配體的物種相比,配體增加對選定靶標(例如分子、細胞或細胞類型、區室,例如細胞或器官區室、組織、器官或身體區域)的親和力。在本發明的組合物和/或方法中有用的配體可以是天然存在的物質,例如蛋白質(例如人血清白蛋白(HSA)、低密度脂蛋白(LDL)或球蛋白)、碳水化合物(例如,葡聚糖、支鏈澱粉、幾丁質、殼聚糖、菊粉、環糊精或透明質酸)或脂質。配體也可以是重組或合成分子,例如合成聚合物,例如合成聚氨基酸或聚胺。 聚氨基酸的實例是聚賴氨酸(PLL)、聚L-天冬氨酸、聚L-谷氨酸、苯乙烯-馬來酸酐共聚物、聚(L-丙交酯-共-乙醇酸)共聚物、二乙烯基醚-馬來酸酐共聚物、N-(2-羥丙基)甲基丙烯醯胺共聚物(HMPA)、聚乙二醇(PEG)、聚乙烯醇(PVA)、聚氨酯、聚(2-乙基丙烯酸)、N-異丙基丙烯醯胺聚合物,或聚磷嗪。多胺的示例包括:聚乙烯亞胺、聚賴氨酸(PLL)、精胺、亞精胺、多胺、假肽-多胺、擬肽多胺、樹枝狀多胺、精氨酸、脒、魚精蛋白、陽離子脂質、陽離子卟啉、多胺的季鹽或α螺旋肽。Certain embodiments of compositions comprising C3 dsRNA agents, C3 antisense polynucleotides, and/or C3 sense polynucleotides may include ligands that alter the distribution, targeting, etc. properties of the C3 dsRNA agent. In some embodiments of compositions comprising a C3 dsRNA agent of the invention, e.g., the ligand increases the response to a selected target (e.g., molecule, cell or cell type, compartment, e.g., cell) compared to a species in which such ligand is not present. or organ compartment, tissue, organ or body region) affinity. Ligands useful in the compositions and/or methods of the invention may be naturally occurring substances such as proteins (e.g. human serum albumin (HSA), low density lipoprotein (LDL) or globulin), carbohydrates (e.g. , dextran, amylopectin, chitin, chitosan, inulin, cyclodextrin or hyaluronic acid) or lipids. Ligands may also be recombinant or synthetic molecules, such as synthetic polymers, such as synthetic polyamino acids or polyamines. Examples of polyamino acids are polylysine (PLL), polyL-aspartic acid, polyL-glutamic acid, styrene-maleic anhydride copolymer, poly(L-lactide-co-glycolic acid) Copolymer, divinyl ether-maleic anhydride copolymer, N-(2-hydroxypropyl)methacrylamide copolymer (HMPA), polyethylene glycol (PEG), polyvinyl alcohol (PVA), polyurethane , poly(2-ethylacrylic acid), N-isopropylacrylamide polymer, or polyphosphazine. Examples of polyamines include: polyethylenimine, polylysine (PLL), spermine, spermidine, polyamines, pseudopeptide-polyamines, peptidomimetic polyamines, dendritic polyamines, arginine, amidine , protamine, cationic lipids, cationic porphyrins, quaternary salts of polyamines or α-helical peptides.
本發明的組合物和/或方法中包含的配體可包含靶向基團,其非限制性實例爲細胞或組織靶向劑,例如,凝集素、糖蛋白、脂質或蛋白質,例如結合特定細胞類型如腎細胞或肝細胞的抗體。靶向基團可以是促甲狀腺素、促黑素、凝集素、糖蛋白、表面活性蛋白A、黏蛋白碳水化合物、多價乳糖、多價半乳糖、N-乙醯-半乳糖胺、N-乙醯-葡糖胺多價甘露糖、多價岩藻糖、糖基化聚氨基酸、多價半乳糖、轉鐵蛋白、雙膦酸鹽、聚谷氨酸鹽、聚天冬氨酸、脂質、膽固醇、類固醇、膽汁酸、葉酸、維生素B12、維生素A、生物素或RGD肽或RGD肽模擬物。Ligands comprised in the compositions and/or methods of the present invention may comprise targeting groups, non-limiting examples of which are cell or tissue targeting agents such as lectins, glycoproteins, lipids or proteins, e.g. binding to specific cells Types of antibodies such as kidney cells or liver cells. Targeting groups can be thyrotropin, melanogen, lectin, glycoprotein, surfactant protein A, mucin carbohydrate, polyvalent lactose, polyvalent galactose, N-acetyl-galactosamine, N- Acetyl-glucosamine polyvalent mannose, polyvalent fucose, glycosylated polyamino acids, polyvalent galactose, transferrin, bisphosphonates, polyglutamate, polyaspartic acid, lipids , cholesterol, steroids, bile acids, folic acid, vitamin B12, vitamin A, biotin or RGD peptide or RGD peptide mimetic.
配體的其他實例包括染料、嵌入劑(例如吖啶)、交聯劑(例如補骨脂素、絲裂黴素 C)、卟啉(TPPC4、texaphyrin、Sapphyrin)、多環芳烴(例如吩嗪、二氫吩嗪);人工核酸內切酶(例如 EDTA)、親脂性分子,例如膽固醇、膽酸、金剛烷乙酸、1-芘丁酸、二氫睾酮、1,3-雙-O(十六烷基)甘油、香葉氧基己基、十六烷基甘油、冰片、薄荷醇、1,3-丙二醇、十七烷基、棕櫚酸、肉豆蔻酸、O3-(油醯基)石膽酸、O3-(油醯基)膽酸、二甲氧基三苯甲基或吩噁嗪和肽綴合物(例如,觸角肽、Tat肽)、烷化劑、磷酸鹽、氨基、巰基、PEG(例如,PEG-40K)、MPEG、[MPEG] 2、聚氨基、烷基、取代烷基、放射性標記物、酶、半抗原(例如生物素)、轉運/吸收促進劑(例如阿司匹林、維生素 E、葉酸)、合成核糖核酸酶(例如咪唑、雙咪唑、組胺、咪唑簇、吖啶-咪唑偶聯物、四氮雜大環的Eu 3+複合物)、二硝基苯基、HRP或AP。 Other examples of ligands include dyes, intercalators (e.g., acridines), cross-linkers (e.g., psoralen, mitomycin C), porphyrins (TPPC4, texaphyrin, Sapphyrin), polycyclic aromatic hydrocarbons (e.g., phenazines) , dihydrophenazine); artificial endonucleases (such as EDTA), lipophilic molecules such as cholesterol, cholic acid, adamantane acetic acid, 1-pyrenebutyric acid, dihydrotestosterone, 1,3-bis-O (ten Hexadecyl)glycerin, geranyloxyhexyl, cetylglycerin, borneol, menthol, 1,3-propanediol, heptadecyl, palmitic acid, myristic acid, O3-(oleyl)lithogallstone Acids, O3-(oleyl)cholic acid, dimethoxytrityl or phenoxazine and peptide conjugates (e.g., antennal peptide, Tat peptide), alkylating agents, phosphates, amino groups, thiol groups, PEG (e.g., PEG-40K), MPEG, [MPEG] 2 , polyamino, alkyl, substituted alkyl, radiolabel, enzyme, hapten (e.g., biotin), transport/absorption enhancer (e.g., aspirin, vitamin E, folic acid), synthetic ribonuclease (such as imidazole, bisimidazole, histamine, imidazole cluster, acridine-imidazole conjugate, Eu 3+ complex of tetraaza macrocycle), dinitrophenyl, HRP or AP.
本發明的組合物和/或方法中包括的配體可以是蛋白質,例如糖蛋白或肽,例如對共配體具有特定親和力的分子,或抗體,例如與特定細胞類型如癌細胞、內皮細胞、心肌細胞 或骨細胞結合的抗體。在本發明的組合物和/或方法的實施方案中有用的配體可以是激素或激素受體。在本發明的組合物和/或方法的實施方案中有用的配體可以是脂質、凝集素、碳水化合物、維生素、輔酶、多價乳糖、多價半乳糖、N-乙醯-半乳糖胺、N-乙醯-葡糖胺多價甘露糖或多價岩藻糖。在本發明的組合物和/或方法的實施方案中有用的配體可以是例如通過破壞細胞的細胞骨架(例如,通過破壞細胞的微管、微絲和/或中間絲)而增加C3 dsRNA試劑向細胞中的攝取的物質。此類試劑的非限制性實例是:紫杉醇、長春新鹼、長春鹼、細胞鬆弛素、諾考達唑、促進微絲聚合劑、紅海海綿素A、鬼筆環肽、猪苓內酯A、茚滿新鹼和肌鈣蛋白。Ligands included in the compositions and/or methods of the present invention may be proteins, such as glycoproteins or peptides, such as molecules with specific affinity for the co-ligand, or antibodies, such as with specific cell types such as cancer cells, endothelial cells, Antibodies that bind to cardiomyocytes or bone cells. Ligands useful in embodiments of the compositions and/or methods of the invention may be hormones or hormone receptors. Ligands useful in embodiments of the compositions and/or methods of the invention may be lipids, lectins, carbohydrates, vitamins, coenzymes, polyvalent lactose, polyvalent galactose, N-acetyl-galactosamine, N-acetyl-glucosamine polyvalent mannose or polyvalent fucose. Ligands useful in embodiments of the compositions and/or methods of the invention may be agents that increase C3 dsRNA, for example, by disrupting the cell's cytoskeleton (e.g., by disrupting the cell's microtubules, microfilaments, and/or intermediate filaments) Substances taken up into cells. Non-limiting examples of such agents are: paclitaxel, vincristine, vinblastine, cytochalasin, nocodazole, microfilament polymerization agent, erythrin A, phalloidin, pontolide A, Indanocristine and troponin.
在一些實施方案中,與本發明的C3 dsRNA試劑連接的配體用作藥代動力學(PK)調節劑。 可用於本發明的組合物和方法的PK調節劑的實例包括但不限於:親脂劑、膽汁酸、類固醇、磷脂類似物、肽、蛋白質結合劑、PEG、維生素、膽固醇、脂肪酸、膽酸、石膽酸、二烷基甘油酯、二醯基甘油酯、磷脂、鞘脂、萘普生、布洛芬、維生素E、生物素、結合血清蛋白的適體等。還已知包含許多硫代磷酸酯鍵的寡核苷酸與血清蛋白結合,因此,在骨架中包含多個硫代磷酸酯鍵的短寡核苷酸,例如約5個鹼基、10個鹼基、15個鹼基或20個鹼基的寡核苷酸也可用作本發明的組合物和/或方法中的配體。 C3 dsRNA 試劑組合物 In some embodiments, ligands linked to the C3 dsRNA agents of the invention serve as pharmacokinetic (PK) modulators. Examples of PK modulators useful in the compositions and methods of the present invention include, but are not limited to: lipophilic agents, bile acids, steroids, phospholipid analogs, peptides, protein binders, PEG, vitamins, cholesterol, fatty acids, bile acids, Lithocholic acid, dialkyl glycerides, digyl glycerides, phospholipids, sphingolipids, naproxen, ibuprofen, vitamin E, biotin, aptamers that bind to serum proteins, etc. Oligonucleotides containing many phosphorothioate linkages are also known to bind to serum proteins, therefore short oligonucleotides containing multiple phosphorothioate linkages in the backbone, e.g. about 5 bases, 10 bases Base, 15 base, or 20 base oligonucleotides may also be used as ligands in the compositions and/or methods of the invention. C3 dsRNA Reagent Composition
在本發明的一些實施方案中,C3 dsRNA試劑在組合物中。本發明的組合物可包含一種或更多種C3 dsRNA試劑和任選的一種或更多種藥學上可接受的載體、遞送劑、靶向劑、可檢測標簽等,根據本發明方法的一些實施方案可用的靶向劑的非限制性實例是將本發明的C3 dsRNA試劑引導至和/或進入待治療細胞的試劑。靶向劑的選擇將取決於以下要素:C3 相關疾病或病症的性質,以及靶細胞類型。在一個非限制性實例中,在本發明的一些實施方案中,可能需要將C3 dsRNA試劑靶向至和/或進入肝細胞。應當理解,在本發明方法的一些實施方案中,治療劑包含僅具有遞送劑的C3 dsRNA試劑,例如包含N-乙醯半乳糖胺(GalNAc)的遞送劑,而沒有任何附加的連接元件。例如,在本發明的一些方面,C3 dsRNA試劑可以連接到包含GalNAc的遞送化合物上,並且包含在含有藥學上可接受載體的組合物中,並且在沒有任何連接至C3 dsRNA試劑的可檢測標記或靶向劑等的情况下施用至細胞或對象。In some embodiments of the invention, a C3 dsRNA agent is in the composition. Compositions of the invention may comprise one or more C3 dsRNA agents and optionally one or more pharmaceutically acceptable carriers, delivery agents, targeting agents, detectable labels, etc., according to some implementations of the methods of the invention Non-limiting examples of targeting agents that may be used in the protocol are agents that direct the C3 dsRNA agents of the invention to and/or into the cells to be treated. The choice of targeting agent will depend on the following factors: the nature of the C3-related disease or condition, and the target cell type. In one non-limiting example, in some embodiments of the invention, it may be desirable to target C3 dsRNA agents to and/or enter hepatocytes. It will be appreciated that in some embodiments of the methods of the invention, the therapeutic agent comprises a C3 dsRNA agent with only a delivery agent, such as a delivery agent comprising N-acetylgalactosamine (GalNAc), without any additional linking elements. For example, in some aspects of the invention, a C3 dsRNA agent can be linked to a GalNAc-containing delivery compound and included in a composition containing a pharmaceutically acceptable carrier, and in the absence of any detectable label linked to the C3 dsRNA agent or Targeting agents, etc. are administered to cells or subjects.
在本發明的C3 dsRNA試劑與一種或更多種遞送劑、靶向劑、標記劑等一起施用和/或連接到其上的情况下,本領域技術人員能夠瞭解並能夠選擇和使用適合的試劑用於本發明的方法中。在本發明的某些方法中可以使用標記試劑來確定C3 dsRNA試劑在細胞和組織中的位置,並且可用於確定已在本發明的方法中施用的包含C3 dsRNA試劑的治療組合物的細胞、組織或器官位置。接附和使用標記試劑如酶標記、染料、放射性標記等的手段是本領域公知的。應當理解,在本發明的組合物和方法的一些實施方案中,標記試劑連接至C3 dsRNA試劑中所包含的正義多核苷酸和反義多核苷酸之一或兩者。 C3 dsRNA 試劑和 C3 反義多核苷酸試劑的遞送 Where the C3 dsRNA reagents of the present invention are administered together with and/or linked to one or more delivery agents, targeting agents, labeling agents, etc., those skilled in the art will understand and be able to select and use appropriate reagents used in the method of the present invention. Labeling reagents can be used in certain methods of the invention to determine the location of C3 dsRNA agents in cells and tissues, and can be used to identify cells, tissues that have been administered therapeutic compositions containing C3 dsRNA agents in the methods of the invention. or organ location. Means for attaching and using labeling reagents such as enzyme labels, dyes, radioactive labels, etc. are well known in the art. It will be appreciated that in some embodiments of the compositions and methods of the invention, the labeling agent is linked to one or both of the sense and antisense polynucleotides comprised in the C3 dsRNA agent. Delivery of C3 dsRNA Reagents and C3 Antisense Polynucleotide Reagents
本發明方法的某些實施方案包括將C3 dsRNA試劑遞送到細胞中。 如本文所用,術語“遞送”是指促進或影響細胞攝取或吸收。C3 dsRNA試劑的吸收或攝取可通過獨立的擴散或活性細胞過程來發生,或通過使用可與本發明的C3 dsRNA試劑相關的遞送劑、靶向劑等來進行。適用於本發明方法的遞送方式包括但不限於體內遞送,其中將C3 dsRNA試劑注射到組織部位或全身給藥。在本發明的一些實施方案中,C3 dsRNA試劑連接至遞送劑。Certain embodiments of the methods of the invention include delivering a C3 dsRNA agent into the cell. As used herein, the term "delivery" means promoting or affecting cellular uptake or absorption. Absorption or uptake of C3 dsRNA agents can occur by separate diffusion or active cellular processes, or by the use of delivery agents, targeting agents, etc., which can be associated with the C3 dsRNA agents of the invention. Modes of delivery suitable for use in the methods of the present invention include, but are not limited to, in vivo delivery, wherein the C3 dsRNA agent is injected into a tissue site or administered systemically. In some embodiments of the invention, the C3 dsRNA agent is linked to the delivery agent.
可用於將C3 dsRNA試劑遞送至細胞、組織和/或對象的方法的非限制性實例包括:C3 dsRNA-GalNAc綴合物、SAMiRNA技術、基於LNP的遞送方法和裸RNA遞送。 這些和其他遞送方法已在本領域成功地用於遞送治療性RNAi試劑以治療各種疾病和病症,例如但不限於:肝病、急性間歇性卟啉症(AIP)、血友病、肺纖維化等。多種遞送方式的詳細信息可在出版物中找到,例如:Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther. Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; 和Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961,其內容均以引用方式並入本文。Non-limiting examples of methods that can be used to deliver C3 dsRNA agents to cells, tissues, and/or subjects include: C3 dsRNA-GalNAc conjugates, SAMiRNA technology, LNP-based delivery methods, and naked RNA delivery. These and other delivery methods have been used successfully in the art to deliver therapeutic RNAi agents to treat a variety of diseases and conditions, such as, but not limited to: liver disease, acute intermittent porphyria (AIP), hemophilia, pulmonary fibrosis, etc. . Detailed information on various delivery methods can be found in publications such as: Nikam, R.R. & K. R. Gore (2018) Nucleic Acid Ther, 28 (4), 209-224 Aug 2018; Springer A.D. & S.F. Dowdy (2018) Nucleic Acid Ther . Jun 1; 28(3): 109–118; Lee, K. et al., (2018) Arch Pharm Res, 41(9), 867-874; and Nair, J.K. et al., (2014) J. Am. Chem. Soc. 136:16958-16961, the contents of which are incorporated herein by reference.
本發明的一些實施方案包括使用脂質奈米顆粒(LNP)將本發明的C3 dsRNA試劑遞送至細胞、組織和/或對象。LNP 通常用於體內遞送 C3 dsRNA 試劑,包括治療性 C3 dsRNA 試劑。使用LNP或其他遞送劑的一個好處是,當使用LNP或其他遞送劑遞送至對象時,C3 RNA劑的穩定性增加。在本發明的一些實施方案中,LNP包含負載有一種或更多種本發明的C3 RNAi分子的陽離子LNP。將包含C3 RNAi分子的 LNP施用於對象,LNP及其接附的C3 RNAi分子通過胞吞作用被細胞攝取,它們的存在導致RNAi觸發分子的釋放,從而介導RNAi。Some embodiments of the invention include the use of lipid nanoparticles (LNPs) to deliver the C3 dsRNA agents of the invention to cells, tissues and/or subjects. LNPs are commonly used to deliver C3 dsRNA agents in vivo, including therapeutic C3 dsRNA agents. One benefit of using LNP or other delivery agents is the increased stability of the C3 RNA agent when delivered to a subject using LNP or other delivery agents. In some embodiments of the invention, the LNPs comprise cationic LNPs loaded with one or more C3 RNAi molecules of the invention. LNPs containing C3 RNAi molecules are administered to the subject. The LNPs and their attached C3 RNAi molecules are taken up by cells via endocytosis, and their presence results in the release of RNAi triggering molecules, thereby mediating RNAi.
可用於本發明的實施方案以將本發明的C3 dsRNA試劑遞送至細胞、組織和/或對象的遞送劑的另一個非限制性實例是:包含GalNAc的試劑,其與本發明的C3 dsRNA試劑連接並將C3 dsRNA試劑遞送至細胞、組織和/或對象。PCT申請WO2020191183 A1 中公開了可用於本發明的方法和組合物的某些實施方案中的某些包含GalNAc的其他遞送劑的實例。可用於本發明的組合物和方法中以將C3 dsRNA試劑遞送至細胞的GalNAc 靶向配體的非限制性實例是靶向配體簇。在此提出的靶向配體簇的實例如:具有磷酸二酯鍵的GalNAc配體(GLO)和具有硫代磷酸酯鍵的GalNAc配體(GLS)。術語“GLX-n”在本文中可用於表示所連接的含GalNAC的化合物舉例並不局限於是以下化合物:GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16中的任一種,每個的結構如下所示,下圖中GalNAc靶向配體與本發明的RNAi劑的連接位置在每個靶向配體的最右側。應當理解,本發明的任何RNAi和dsRNA分子都可以連接到GLS-1、GLS-2、GLS-3、GLS-4、GLS-5、GLS-6、GLS-7、GLS-8、GLS-9、GLS-10、GLS-11、GLS-12、GLS-13、GLS-14、GLS-15、GLS-16、GLO-1、GLO-2、GLO-3、GLO-4、GLO-5、GLO-6、GLO-7、GLO-8、GLO-9、GLO-10、GLO-11、GLO-12、GLO-13、GLO-14、GLO-15和GLO-16上,以下是GLO-1到GLO-16和GLS-1到GLS-16 的結構。
“雜環烷基”表示具有指定數目的環原子的非芳族的部分飽和的或完全飽和的環(例如,3-10 或 3-7 元雜環烷基),所述環原子由一個或多個選自 N、O 和 S 的雜原子(例如, 1、2、3 或 4 個雜原子)組成,且其餘的環原子爲碳。5 元雜環烷基是具有 5 個 環原子的雜環烷基。6 元雜環烷基是具有 6 個環原子的雜環烷基。雜環烷基可以是單環或多環(例如,二環、三環)的。雜環烷基的例子包括氧雜環丙基、氮雜環丙基、氮雜環丁基、吡咯烷基、咪唑烷基、吡唑烷基、呱啶基、呱嗪基、 嗎啉基和硫代嗎啉基。此外,多環雜環烷基的一個環可以爲芳族的(例如,芳基或雜芳基),只要所述多環雜環烷基經由非芳族碳或氮原子結合至母體結構。例如,1,2,3,4-四氫喹啉-1-基(其中所述部分經 由非芳族氮原子結合至母體結構)被認爲是雜環烷基,而 1,2,3,4-四氫喹啉-8-基 (其中所述部分經由芳族碳原子結合至母體結構)不被認爲是雜環烷基。低級雜環烷烴一般是指 C 3-6個單環,在無特殊說明情况下,低級雜環烷基一般可優先 爲完全飽和的碳環。在本發明的一些實施方案中,體內遞送也可以通過β-葡聚糖遞送系統,例如美國專利No. 5,032,401和5,607,677, 以及美國公布No. 2005/0281781中描述的那些,它們的全部內容通過引用並入本文。也可以使用本領域已知的方法例如電穿孔和脂質轉染將C3 RNAi試劑體外引入細胞。在本發明方法的某些實施方案中,C3 dsRNA在沒有靶向劑的情况下被遞送。這些RNA可以作爲“裸”RNA分子遞送。作爲非限制性實例,本發明的C3 dsRNA可以在包含RNAi試劑但不包含靶向劑(例如 GalNAc 靶向化合物)的藥物組合物中施用於對象,以治療對象的C3相關疾病或病症,例如腎病。 "Heterocycloalkyl" means a nonaromatic partially saturated or fully saturated ring (e.g., 3-10 or 3-7 membered heterocycloalkyl) having the specified number of ring atoms consisting of one or Composed of multiple heteroatoms (eg, 1, 2, 3, or 4 heteroatoms) selected from N, O, and S, and the remaining ring atoms are carbon. 5-membered heterocycloalkyl is a heterocycloalkyl group with 5 ring atoms. 6-membered heterocycloalkyl is a heterocycloalkyl group with 6 ring atoms. Heterocycloalkyl groups may be monocyclic or polycyclic (eg, bicyclic, tricyclic). Examples of heterocycloalkyl groups include oxanyl, aziridyl, azetidinyl, pyrrolidinyl, imidazolidinyl, pyrazolidinyl, pyridinyl, pyridazinyl, morpholinyl and Thiomorpholinyl. Additionally, one ring of a polycyclic heterocycloalkyl group can be aromatic (eg, aryl or heteroaryl) so long as the polycyclic heterocycloalkyl group is bonded to the parent structure via a nonaromatic carbon or nitrogen atom. For example, 1,2,3,4-tetrahydroquinolin-1-yl (where the moiety is bonded to the parent structure via a non-aromatic nitrogen atom) is considered a heterocycloalkyl group, while 1,2,3, 4-Tetrahydroquinolin-8-yl (where the moiety is bonded to the parent structure via an aromatic carbon atom) is not considered a heterocycloalkyl group. Lower heterocycloalkanes generally refer to C 3-6 monocyclic rings. Unless otherwise specified, lower heterocycloalkyl groups can generally be preferably fully saturated carbocyclic rings. In some embodiments of the invention, in vivo delivery may also be by beta-glucan delivery systems, such as those described in U.S. Patent Nos. 5,032,401 and 5,607,677, and U.S. Publication No. 2005/0281781, the entire contents of which are incorporated by reference. Incorporated herein. C3 RNAi agents can also be introduced into cells in vitro using methods known in the art such as electroporation and lipofection. In certain embodiments of the methods of the invention, C3 dsRNA is delivered without a targeting agent. These RNAs can be delivered as "naked" RNA molecules. As a non-limiting example, the C3 dsRNA of the present invention can be administered to a subject in a pharmaceutical composition comprising an RNAi agent but not a targeting agent (e.g., a GalNAc targeting compound) to treat a C3-related disease or disorder in the subject, such as nephropathy .
應當理解,除了本文描述的某些遞送方式之外,其他RNAi遞送方式可以與本文描述的C3 RNAi試劑和治療方法的實施方案結合使用,例如但不限於本文描述的那些和本領域中使用的那些。It will be appreciated that in addition to certain delivery modalities described herein, other RNAi delivery modalities may be used in conjunction with embodiments of the C3 RNAi agents and therapeutic methods described herein, such as, but not limited to, those described herein and those used in the art. .
本發明的C3 dsRNA試劑可以以有效降低細胞和/或對象中C3多肽的水平和活性的量和方式施用於對象。在本發明方法的一些實施方案中,將一種或更多種C3 dsRNA試劑施用於細胞和/或對象以治療與C3表達和活性相關的疾病或病症。在一些實施方案中,本發明的方法包括向需要此類治療的對象施用一種或更多種C3 dsRNA試劑以減輕對象中與C3表達相關的疾病或病症。可以施用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑以降低體外、離體和體內細胞中的一種或更多種中的C3表達和/或活性。The C3 dsRNA agents of the invention can be administered to a subject in an amount and in a manner effective to reduce the level and activity of C3 polypeptide in the cell and/or subject. In some embodiments of the methods of the invention, one or more C3 dsRNA agents are administered to cells and/or subjects to treat a disease or disorder associated with C3 expression and activity. In some embodiments, methods of the invention include administering to a subject in need of such treatment one or more C3 dsRNA agents to alleviate a disease or condition associated with C3 expression in the subject. A C3 dsRNA agent or C3 antisense polynucleotide agent of the invention can be administered to reduce C3 expression and/or activity in one or more of cells in vitro, ex vivo, and in vivo.
在本發明的一些實施方案中,通過將C3 dsRNA試劑或C3反義多核苷酸試劑遞送(例如引入)細胞中來降低細胞中C3多肽的水平並因此降低其活性。靶向劑和方法可用於幫助將C3 dsRNA試劑或C3反義多核苷酸劑遞送至對象內的特定細胞類型、細胞亞型、器官、空間區域,和/或細胞內的亞細胞區域。C3 dsRNA試劑可以在本發明的某些方法中單獨地或與一種或更多種另外的C3 dsRNA試劑組合施用。在一些實施方案中,向對象施用2、3、4或更多種獨立選擇的C3 dsRNA試劑。 在本發明的某些實施方案中,將C3 dsRNA試劑與一種或更多種用於治療C3相關疾病或病症的另外的治療方案聯合施用於對象以治療C3相關疾病或病症。另外的治療方案的非限制性實例是:施用一種或更多種本發明的C3反義多核苷酸、施用非C3 dsRNA治療劑和行爲改變。可以在以下一個或更多個時間施用另外的治療方案:在施用本發明的C3 dsRNA試劑之前、同時和之後。應當理解,本文所用的“同時”是指在零時間的5分鐘內、零時間的10分鐘內、零時間的30分鐘內、零時間的45分鐘內和零時間的60分鐘內,其中“零時間”是向對象施用本發明的C3 dsRNA試劑的時間。非C3 dsRNA 治療劑的非限制性實例是:另外的治療劑,如例如抗補體 組分 C5 抗體或其抗原結合片段(例如依庫珠單抗)、iRNA 靶向補體成分 C5 和/或 C3 肽抑制劑(例如康普辛伐他汀)的藥劑, 從而治療患有將從C3減少中受益的疾病的受試者表達,或上述任何的組合,及配製成藥劑組合的治療成人和兒童陣發性睡眠性血紅蛋白尿症和非典型溶血性尿毒症候群治療劑。行爲改變的非限制性實例是:飲食方案、諮詢和鍛煉方案。這些和其他治療劑以及行爲改變是本領域已知的,並且可用於治療對象的C3疾病或病症,並且還可以與一種或更多種本發明的C3 dsRNA試劑組合,向對象給藥以治療C3疾病或病症。向細胞或對象施用以治療C3相關疾病或病症的本發明的C3 dsRNA試劑可以與一種或更多種其他治療劑或活性成分以協同方式起作用,從而增加一種或更多種治療劑或活性成分的有效性和/或增加C3 dsRNA試劑治療C3相關疾病或病症的有效性。In some embodiments of the invention, the level of a C3 polypeptide in the cell, and thus its activity, is reduced by delivering (eg, introducing) a C3 dsRNA agent or C3 antisense polynucleotide agent into the cell. Targeting agents and methods can be used to facilitate delivery of C3 dsRNA agents or C3 antisense polynucleotide agents to specific cell types, cell subtypes, organs, spatial regions, and/or subcellular regions within cells within a subject. A C3 dsRNA agent can be administered alone or in combination with one or more additional C3 dsRNA agents in certain methods of the invention. In some embodiments, 2, 3, 4, or more independently selected C3 dsRNA agents are administered to the subject. In certain embodiments of the invention, a C3 dsRNA agent is administered to a subject in combination with one or more additional treatment regimens for treating a C3-related disease or disorder to treat a C3-related disease or disorder. Non-limiting examples of additional treatment regimens are administration of one or more C3 antisense polynucleotides of the invention, administration of non-C3 dsRNA therapeutics, and behavioral modification. Additional treatment regimens may be administered at one or more of the following times: before, simultaneously with, and after administration of the C3 dsRNA agent of the invention. It should be understood that "simultaneously" used in this article refers to within 5 minutes of zero time, within 10 minutes of zero time, within 30 minutes of zero time, within 45 minutes of zero time, and within 60 minutes of zero time, where "zero time" "Time" is the time at which a C3 dsRNA agent of the invention is administered to a subject. Non-limiting examples of non-C3 dsRNA therapeutics are: additional therapeutics such as, for example, anti-complement component C5 antibodies or antigen-binding fragments thereof (e.g., eculizumab), iRNA targeting complement component C5 and/or C3 peptides Agents of inhibitors (e.g., simvastatin), thereby treating subjects with diseases that would benefit from reductions in C3 expression, or combinations of any of the foregoing, and formulated into combination agents for the treatment of paroxysmal epilepsy in adults and children Therapeutic agent for nocturnal hemoglobinuria and atypical hemolytic uremic syndrome. Non-limiting examples of behavior modification are: dietary programs, counseling, and exercise programs. These and other therapeutic agents and behavior modification agents are known in the art and may be used to treat C3 diseases or conditions in a subject, and may also be administered to a subject in combination with one or more C3 dsRNA agents of the invention to treat C3 Disease or illness. C3 dsRNA agents of the invention administered to a cell or subject to treat a C3-related disease or disorder can act in a synergistic manner with one or more other therapeutic agents or active ingredients, thereby adding one or more therapeutic agents or active ingredients effectiveness and/or increase the effectiveness of C3 dsRNA agents in treating C3-related diseases or conditions.
本發明的治療方法包括施用C3 dsRNA試劑,可在 C3 相關疾病或病症發作之前和/或當存在C3相關疾病或病症時使用,包括在疾病或病症的早期、中期、晚期階段以及任何這些階段之前和之後的所有時間使用。本發明的方法還可以治療先前已經接受過一種或更多種其他治療劑和/或治療活性成分的C3相關疾病或病症治療的對象,其中一種或更多種其他治療劑和/或治療活性成分在治療對象的C3相關疾病或病症方面不成功、成功性最小和/或不再成功。 載體編碼的 dsRNA The treatment methods of the present invention include the administration of a C3 dsRNA agent, which may be used before the onset of and/or when a C3-related disease or disorder is present, including early, middle, late stages of the disease or disorder, and before any of these stages. and use at all times thereafter. The methods of the present invention may also treat subjects who have been previously treated for a C3-related disease or disorder with one or more other therapeutic agents and/or therapeutic active ingredients. Unsuccessful, minimally successful, and/or no longer successful in treating the subject's C3-related disease or condition. vector-encoded dsRNA
在本發明的某些實施方案中,可以使用載體將C3 dsRNA試劑遞送到細胞中。C3 dsRNA 試劑轉錄單位可包含在DNA或RNA載體中。用於將序列遞送到細胞和/或對象中的此類編碼轉基因的載體的製備和使用是本領域公知的。可在本發明的方法中使用導致C3 dsRNA瞬時表達的載體,瞬時表達例如至少1、2、3、4、5、6、7、8、9、10小時或更多小時、1、2、3、4、5、6、7、8、9、10 周或更多周。瞬時表達的長度可以使用基於以下要素的常規方法確定:例如但不限於所選的特定載體構建體和靶細胞和/或組織。此類轉基因可作爲線性構建體、環狀質粒或病毒載體引入,其可爲整合或非整合載體。也可以構建轉基因以使其作爲染色體外質粒遺傳(Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292)。In certain embodiments of the invention, a carrier can be used to deliver C3 dsRNA agents into cells. C3 dsRNA reagent transcription units can be contained in DNA or RNA vectors. The preparation and use of such transgene-encoding vectors for delivering sequences into cells and/or subjects is well known in the art. Vectors that result in transient expression of C3 dsRNA, for example, for at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more hours, 1, 2, 3 can be used in the methods of the invention. , 4, 5, 6, 7, 8, 9, 10 or more weeks. The length of transient expression can be determined using conventional methods based on factors such as, but not limited to, the specific vector construct selected and the target cells and/or tissues. Such transgenes can be introduced as linear constructs, circular plasmids or viral vectors, which can be integrating or non-integrating vectors. Transgenes can also be constructed so that they are inherited as extrachromosomal plasmids (Gassmann, et al., Proc. Natl. Acad. Sci. USA (1995) 92:1292).
C3 dsRNA試劑的一條或更多條單鏈可以從表達載體上的啓動子轉錄。在要表達兩條單獨的鏈以産生例如dsRNA的情况下,可以使用例如轉染或感染的方式將兩個單獨的表達載體共同引入細胞。在某些實施方案中,本發明的C3 dsRNA試劑的每條單獨鏈都可以被包含在同一表達載體上的啓動子轉錄。在本發明的某些實施方案中,C3 dsRNA試劑被表達爲通過接頭多核苷酸序列連接的反向重複多核苷酸,使得C3 dsRNA試劑具有莖環結構。One or more single strands of the C3 dsRNA agent can be transcribed from a promoter on the expression vector. Where two separate strands are to be expressed to produce, for example, dsRNA, the two separate expression vectors can be co-introduced into the cell using, for example, transfection or infection. In certain embodiments, each individual strand of the C3 dsRNA agent of the invention can be transcribed from a promoter contained on the same expression vector. In certain embodiments of the invention, the C3 dsRNA agent is expressed as inverted repeat polynucleotides linked by a linker polynucleotide sequence such that the C3 dsRNA agent has a stem-loop structure.
RNA表達載體的非限制性實例是DNA質粒或病毒載體。在本發明的實施方案中有用的表達載體可以與真核細胞相容。真核細胞表達載體在本領域是常規使用的,並且可從許多商業來源獲得。C3 dsRNA 表達載體的遞送可以是全身性的,例如通過靜脈內或肌肉內給藥、通過給藥至從對象移出的靶細胞然後將靶細胞重新引入對象,或通過允許引入所需靶細胞的任何其他方式來進行。Non-limiting examples of RNA expression vectors are DNA plasmids or viral vectors. Expression vectors useful in embodiments of the invention may be compatible with eukaryotic cells. Eukaryotic expression vectors are routinely used in the art and are available from many commercial sources. Delivery of the C3 dsRNA expression vector may be systemic, such as by intravenous or intramuscular administration, by administration to target cells removed from the subject and then reintroduced to the subject, or by any method that allows the introduction of the desired target cells. Proceed in other ways.
可包括在該方法的實施方案中的病毒載體系統包括但不限於:(a)腺病毒載體;(b) 逆轉錄病毒載體,包括但不限於慢病毒載體、莫洛尼鼠白血病病毒等;(c) 腺相關病毒載體;(d) 單純疱疹病毒載體;(e) SV 40 載體;(f) 多瘤病毒載體;(g) 乳頭狀瘤病毒載體;(h) 小核糖核酸病毒載體;(i) 痘病毒載體,例如正痘病毒載體,例如痘苗病毒載體或禽痘病毒載體,例如金絲雀痘或家禽痘病毒載體;(j) 輔助依賴型或無腸腺病毒載體。用於重組表達C3 dsRNA試劑的構建體可以包含調節元件,例如啓動子、增强子等,它們可以被選擇以提供組成型或調節型/誘導型表達。病毒載體系統以及啓動子和增强子的使用等在本領域是常規的並且可以與本文所述的方法和組合物結合使用。Viral vector systems that may be included in embodiments of the method include, but are not limited to: (a) adenoviral vectors; (b) retroviral vectors, including but not limited to lentiviral vectors, Moloney murine leukemia virus, and the like; ( c) Adeno-associated virus vector; (d) Herpes simplex virus vector; (e) SV 40 vector; (f) Polyomavirus vector; (g) Papillomavirus vector; (h) Picornavirus vector; (i) ) poxvirus vectors, such as orthopoxvirus vectors, such as vaccinia virus vectors or fowlpox virus vectors, such as canarypox or fowlpox virus vectors; (j) helper-dependent or gutless adenovirus vectors. Constructs for recombinant expression of C3 dsRNA agents may contain regulatory elements such as promoters, enhancers, etc., which may be selected to provide constitutive or regulated/inducible expression. Viral vector systems and the use of promoters and enhancers, etc. are routine in the art and can be used in conjunction with the methods and compositions described herein.
本發明的某些實施方案包括使用病毒載體將C3 dsRNA試劑遞送到細胞中。許多基於腺病毒的遞送系統在本領域中常規用於遞送至例如肺、肝、中樞神經系統、內皮細胞和肌肉。可用於本發明方法的病毒載體的非限制性實例是:AAV載體、痘病毒如痘苗病毒、改良安卡拉病毒(MVA)、NYVAC、禽痘如禽痘或金絲雀痘病毒。Certain embodiments of the invention include the use of viral vectors to deliver C3 dsRNA agents into cells. A number of adenovirus-based delivery systems are routinely used in the art for delivery to, for example, the lungs, liver, central nervous system, endothelial cells, and muscle. Non-limiting examples of viral vectors that may be used in the methods of the invention are: AAV vectors, poxviruses such as vaccinia virus, modified Ankara virus (MVA), NYVAC, fowlpox such as fowlpox or canarypox virus.
本發明的某些實施方案包括使用載體將C3 dsRNA試劑遞送到細胞中的方法,並且此類載體可以在藥學上可接受的載體中,所述載體可以但不必包括其中嵌入基因遞送載體的緩釋基質。在一些實施方案中,用於遞送C3 dsRNA的載體可以由重組細胞産生,並且本發明的藥物組合物可以包括一種或更多種産生C3 dsRNA遞送系統的細胞。 含有 C3 dsRNA 或 ssRNA 試劑的藥物組合物 Certain embodiments of the present invention include methods of delivering C3 dsRNA agents into cells using carriers, and such carriers may be in pharmaceutically acceptable carriers that may, but need not, include sustained release in which the gene delivery vector is embedded matrix. In some embodiments, vectors for delivering C3 dsRNA can be produced by recombinant cells, and pharmaceutical compositions of the invention can include one or more cells that produce C3 dsRNA delivery systems. Pharmaceutical compositions containing C3 dsRNA or ssRNA agents
本發明的某些實施方案包括含有C3 dsRNA試劑或C3反義多核苷酸試劑和藥學上可接受的載體的藥物組合物的用途。包含C3 dsRNA試劑或C3反義多核苷酸劑的藥物組合物可用於本發明的方法中以降低細胞中的C3基因表達和C3活性,並可用於治療C3相關疾病或病症。此類藥物組合物可以基於遞送方式來配製。用於遞送方式的製劑的非限制性實例是:配製用於皮下遞送的組合物、配製用於通過腸胃外遞送全身給藥的組合物、配製用於靜脈內(IV)遞送的組合物、配製用於鞘內遞送的組合物、配製用於直接遞送至腦中的組合物等。可以使用一種或更多種方式施用本發明的藥物組合物以將C3 dsRNA試劑或C3反義多核苷酸試劑遞送到細胞中,例如:表面(例如,通過透皮貼劑);肺部,例如通過吸入或吹入粉末或氣霧劑,包括通過霧化器;氣道內、鼻內、表皮和透皮、口服或腸胃外。腸胃外給藥包括靜脈內、動脈內、皮下、腹膜內或肌肉內注射或輸注;表皮下,例如通過植入裝置;或顱內,例如通過實質內;鞘內或心室內施用。C3 dsRNA試劑或C3反義多核苷酸劑也可以直接遞送至靶組織,例如直接遞送至肝臟、直接遞送至腎臟等。可以理解的是,“遞送C3 dsRNA試劑”或“遞送C3反義多核苷酸試劑”到細胞中分別包括遞送C3 dsRNA試劑或C3反義多核苷酸劑、直接在細胞中表達C3 dsRNA試劑以及從遞送到細胞中的編碼載體表達C3 dsRNA試劑,或使得C3 dsRNA或C3反義多核苷酸試劑出現在細胞中的任何合適的方式。製劑的製備和使用以及用於遞送抑制性RNA的手段是本領域公知的和常規使用的。Certain embodiments of the invention include the use of pharmaceutical compositions containing a C3 dsRNA agent or a C3 antisense polynucleotide agent and a pharmaceutically acceptable carrier. Pharmaceutical compositions containing C3 dsRNA agents or C3 antisense polynucleotide agents can be used in the methods of the invention to reduce C3 gene expression and C3 activity in cells, and can be used to treat C3-related diseases or disorders. Such pharmaceutical compositions can be formulated based on the mode of delivery. Non-limiting examples of formulations for delivery modes are: compositions formulated for subcutaneous delivery, compositions formulated for systemic administration by parenteral delivery, compositions formulated for intravenous (IV) delivery, compositions formulated for Compositions for intrathecal delivery, compositions formulated for direct delivery into the brain, and the like. The pharmaceutical compositions of the invention may be administered using one or more means to deliver the C3 dsRNA agent or C3 antisense polynucleotide agent into cells, e.g.: the surface (e.g., via a transdermal patch); the lungs, e.g. By inhalation or insufflation of powder or aerosol, including by nebulizer; intratracheal, intranasal, epidermal and transdermal, oral or parenteral. Parenteral administration includes intravenous, intraarterial, subcutaneous, intraperitoneal or intramuscular injection or infusion; subcutaneous, for example by an implanted device; or intracranial, for example by intraparenchymal; intrathecal or intraventricular administration. C3 dsRNA agents or C3 antisense polynucleotide agents can also be delivered directly to target tissues, such as directly to the liver, directly to the kidneys, and the like. It will be understood that "delivering a C3 dsRNA agent" or "delivering a C3 antisense polynucleotide agent" to a cell respectively includes delivering a C3 dsRNA agent or a C3 antisense polynucleotide agent, expressing the C3 dsRNA agent directly in the cell, and from The encoding vector is delivered to the cell expressing the C3 dsRNA agent, or any suitable means that causes the C3 dsRNA or C3 antisense polynucleotide agent to be present in the cell. The preparation and use of formulations and means for delivering inhibitory RNA are well known and routinely used in the art.
如本文所用,“藥物組合物”包含藥理學有效量的本發明的C3 dsRNA試劑或C3反義多核苷酸劑和藥學上可接受的載體。術語“藥學上可接受的載體”是指用於施用治療劑的載體。此類載體包括但不限於鹽水、緩衝鹽水、葡萄糖、水、甘油、乙醇及其組合。該術語明確排除細胞培養基。對於口服給藥的藥物,藥學上可接受的載體包括但不限於藥學上可接受的賦形劑,例如惰性稀釋劑、崩解劑、黏合劑、潤滑劑、甜味劑、調味劑、著色劑和防腐劑。合適的惰性稀釋劑包括碳酸鈉和碳酸鈣、磷酸鈉和磷酸鈣以及乳糖,而玉米澱粉和藻酸是合適的崩解劑。黏合劑可包括澱粉和明膠,而潤滑劑(如果存在)通常是硬脂酸鎂、硬脂酸或滑石粉。如果需要,片劑可以用例如單硬脂酸甘油酯或二硬脂酸甘油酯之類的材料包衣,以延遲在胃腸道中的吸收。包含在藥物製劑中的試劑在下文進一步描述。如本文所用的術語,例如“藥理學有效量”、“治療有效量”和“有效量”,是指本發明的C3 dsRNA試劑或C3反義多核苷酸試劑産生預期的藥理學、治療或預防結果的量。例如,如果與疾病或障礙相關的可測量參數至少降低 10% 時,則認爲給定的臨床治療有效,那麽用於治療該疾病或病症的藥物的治療有效量是使該參數降低至少10%所需的量。例如,治療有效量的C3 dsRNA試劑或C3反義多核苷酸劑可以將C3多肽水平降低至少10%。藥物組合物可以包含這樣的dsRNAi試劑,其包括例如表1中所顯示的雙鏈體AV00375至AV00447。在一些實施方案中,優選的dsRNAi試劑包括例如雙鏈體AV00375、AV00413、AV00416或AV00429。在另一些實施方案中,優選的表2中dsRNAi試劑包括例如AV00375、AV00413、AV00416或AV00429。 有效量 As used herein, a "pharmaceutical composition" includes a pharmacologically effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention and a pharmaceutically acceptable carrier. The term "pharmaceutically acceptable carrier" refers to a carrier used to administer a therapeutic agent. Such carriers include, but are not limited to, saline, buffered saline, glucose, water, glycerol, ethanol, and combinations thereof. This term specifically excludes cell culture media. For drugs administered orally, pharmaceutically acceptable carriers include, but are not limited to, pharmaceutically acceptable excipients, such as inert diluents, disintegrating agents, binders, lubricants, sweeteners, flavoring agents, and coloring agents. and preservatives. Suitable inert diluents include sodium and calcium carbonate, sodium and calcium phosphate and lactose, while cornstarch and alginic acid are suitable disintegrants. Binders may include starches and gelatin, while lubricants, if present, are usually magnesium stearate, stearic acid, or talc. If desired, the tablets may be coated with a material such as glyceryl monostearate or glyceryl distearate to delay absorption in the gastrointestinal tract. Agents included in the pharmaceutical formulations are described further below. As used herein, terms such as "pharmacologically effective amount,""therapeutically effective amount," and "effective amount" mean that the C3 dsRNA agent or C3 antisense polynucleotide agent of the invention produces the intended pharmacological, therapeutic, or preventive The amount of results. For example, a given clinical treatment is considered effective if it reduces a measurable parameter associated with the disease or disorder by at least 10%, then a therapeutically effective amount of a drug used to treat the disease or disorder is one that reduces that parameter by at least 10% required amount. For example, a therapeutically effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent can reduce C3 polypeptide levels by at least 10%. Pharmaceutical compositions may comprise dsRNAi agents including, for example, duplexes AV00375 to AV00447 shown in Table 1. In some embodiments, preferred dsRNAi agents include, for example, duplexes AV00375, AV00413, AV00416, or AV00429. In other embodiments, preferred dsRNAi agents in Table 2 include, for example, AV00375, AV00413, AV00416, or AV00429. effective amount
在一些方面,本發明的方法包括將細胞與有效量的C3 dsRNA試劑或C3反義多核苷酸試劑接觸以減少所接觸細胞中的C3基因表達。本發明方法的某些實施方案包括以有效降低C3基因表達和治療對象的C3相關疾病或病症的量向對象施用C3 dsRNA試劑或C3反義多核苷酸劑。就減少C3的表達和/或用於治療C3相關疾病或病症而言,所使用的“有效量”是實現所需生物學效果所必需或足夠的量。例如,治療C3相關疾病或病症的C3 dsRNA試劑或C3反義多核苷酸試劑的有效量可以是:(i) 減緩或停止疾病或病症的進展所需的量;(ii) 逆轉、減少或消除疾病或病症的一種或更多種症狀。在本發明的一些方面,有效量是當施用於需要治療C3相關疾病或病症的對象時,導致疾病或病症的預防和/或治療的治療響應的C3 dsRNA試劑或C3反義多核苷酸劑的量。根據本發明的一些方面,有效量是本發明的C3 dsRNA試劑或C3反義多核苷酸試劑當與針對C3相關疾病或病症的另一種治療性治療組合或共同施用時,導致預防和/或治療該疾病或病症的治療響應的量。在本發明的一些實施方案中,用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑治療對象的生物學效應可以是由C3相關疾病或病症引起的症狀的改善和/或完全消除。在本發明的一些實施方案中,生物學效應是C3相關疾病或病症的完全消除,例如通過指示對象沒有C3相關疾病或病症的診斷測試來證明。可檢測的生理症狀的非限制性實例包括在施用本發明的試劑後對象肝臟中脂質積累的減少。其他評估C3相關疾病或病症狀態的本領域已知方式可用於確定本發明的試劑和/或方法對C3相關疾病或病症的影響。In some aspects, methods of the invention include contacting a cell with an effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent to reduce C3 gene expression in the contacted cell. Certain embodiments of the methods of the present invention include administering to a subject a C3 dsRNA agent or a C3 antisense polynucleotide agent in an amount effective to reduce C3 gene expression and treat a C3-related disease or disorder in the subject. For purposes of reducing C3 expression and/or for treating C3-related diseases or conditions, an "effective amount" used is an amount necessary or sufficient to achieve the desired biological effect. For example, an effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent to treat a C3-related disease or disorder may be an amount required to: (i) slow or stop the progression of the disease or disorder; (ii) reverse, reduce, or eliminate One or more symptoms of a disease or condition. In some aspects of the invention, an effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent, when administered to a subject in need of treatment of a C3-related disease or disorder, results in a therapeutic response in the prevention and/or treatment of the disease or disorder. quantity. According to some aspects of the invention, an effective amount is a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention that results in prevention and/or treatment when combined or co-administered with another therapeutic treatment for a C3-related disease or disorder. The amount of response to treatment of the disease or condition. In some embodiments of the invention, the biological effect of treating a subject with a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention may be an amelioration and/or complete elimination of symptoms caused by a C3-related disease or disorder. In some embodiments of the invention, the biological effect is complete abrogation of a C3-related disease or disorder, such as demonstrated by a diagnostic test indicating that the subject does not have a C3-related disease or disorder. Non-limiting examples of detectable physiological symptoms include a reduction in lipid accumulation in the liver of a subject following administration of an agent of the invention. Other art-known means of assessing C3-related disease or disorder states may be used to determine the effect of the agents and/or methods of the invention on C3-related diseases or disorders.
通常在臨床試驗中確定將C3多肽活性降低至治療C3相關疾病或病症的水平的C3 dsRNA試劑或C3反義多核苷酸試劑的有效量,這樣的臨床試驗在盲法研究中爲測試人群與對照人群建立有效劑量。在一些實施方案中,有效量是導致所需響應的量,例如減少細胞、組織和/或患有疾病或病症的對象中的C3相關疾病或病症的量。因此,用於治療可通過降低C3多肽活性治療的 C3相關疾病或病症的C3dsRNA試劑或C3反義多核苷酸試劑的有效量可以是這樣的量:當施用時,將對象中C3多肽活性的量降低至低於在未施用C3 dsRNA試劑或C3反義多核苷酸劑的情况下將存在於細胞、組織和/或對象中的量。在本發明的某些方面,存在於未接觸或施用過本發明的C3 dsRNA試劑或C3反義多核苷酸劑的細胞、組織和/或對象中的C3多肽活性和/或C3基因表達的水平被稱爲“對照”量。在本發明方法的一些實施方案中,對象的對照量是對象的治療前量;換言之,對象在施用C3試劑之前的水平可以是該對象的對照水平,並且用於與其在向對象施用siRNA後的C3多肽活性和/或C3基因表達水平相比較。在治療C3相關疾病或病症的情况下,期望的響應可以是減少或消除細胞、組織和/或對象中疾病或病症的一種或更多種症狀。減少或消除可以是暫時的,也可以是永久性的。應當理解,可以使用確定C3多肽活性、C3基因表達、症狀評估、臨床測試等的方法來監測C3相關疾病或病症的狀態。在本發明的一些方面,對治療C3相關疾病或病症的期望響應是延遲疾病或病症的發作或甚至預防疾病或病症的發作。An effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent that reduces C3 polypeptide activity to a level that treats a C3-related disease or disorder is typically determined in a clinical trial in which a test population is compared with a control population in a blinded study Establish effective doses in populations. In some embodiments, an effective amount is an amount that results in a desired response, such as a reduction in C3-related disease or disorder in cells, tissues, and/or a subject suffering from the disease or disorder. Accordingly, an effective amount of a C3 dsRNA agent or a C3 antisense polynucleotide agent for treating a C3-related disease or condition treatable by reducing C3 polypeptide activity can be an amount that, when administered, reduces the amount of C3 polypeptide activity in the subject Reduce to less than the amount that would be present in the cell, tissue and/or subject without administration of the C3 dsRNA agent or C3 antisense polynucleotide agent. In certain aspects of the invention, the level of C3 polypeptide activity and/or C3 gene expression present in cells, tissues and/or subjects that have not been exposed to or administered a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention Known as the "control" quantity. In some embodiments of the methods of the invention, the subject's control amount is the subject's pre-treatment amount; in other words, the subject's level before administration of the C3 agent can be the subject's control level and used to compare it to the subject's level after administration of the siRNA to the subject. C3 peptide activity and/or C3 gene expression levels are compared. In the case of treating a C3-related disease or disorder, the desired response may be to reduce or eliminate one or more symptoms of the disease or disorder in cells, tissues, and/or subjects. Reduction or elimination can be temporary or permanent. It will be appreciated that methods of determining C3 polypeptide activity, C3 gene expression, symptom assessment, clinical testing, and the like may be used to monitor the status of a C3-related disease or disorder. In some aspects of the invention, a desired response to treating a C3-related disease or disorder is to delay the onset of the disease or disorder or even prevent the onset of the disease or disorder.
降低C3多肽活性的化合物的有效量也可以通過以下方式確定:評估施用C3 dsRNA試劑或C3反義多核苷酸試劑對細胞或對象的生理作用,例如施用後C3相關疾病或病症的減少。對象的測定和/或症狀監測可用於確定本發明的C3 dsRNA試劑或C3反義多核苷酸劑的功效(其可以在本發明的藥物化合物中給藥),並確定對治療是否有響應。一個非限制性實例是一種或更多種本領域已知的血清脂質譜測試。另一個非限制性示例是:在用本發明的C3 dsRNA試劑治療對象之前和之後,可以使用一種或更多種本領域已知的腎功能測試來確定對象的C3相關腎病或病症的狀態。在另一個非限制性實例中,使用一種或更多種本領域已知的獲得性溶血性貧血、血紅蛋白尿、骨髓衰竭和血栓形成傾向(形成血栓的傾向)測試來確定對象中C3相關疾病的狀態。在該實施例中,疾病包括陣發性睡眠性血紅蛋白尿 (PNH),並且該測試用於確定在用本發明的C3 dsRNA試劑治療對象之前和之後對象中的溶血水平。An effective amount of a compound that reduces the activity of a C3 polypeptide can also be determined by assessing the physiological effects of administration of a C3 dsRNA agent or C3 antisense polynucleotide agent on a cell or subject, such as a reduction in a C3-related disease or disorder following administration. Assays and/or symptom monitoring in subjects can be used to determine the efficacy of the C3 dsRNA agents or C3 antisense polynucleotide agents of the invention (which can be administered in the pharmaceutical compounds of the invention), and to determine whether there is a response to treatment. One non-limiting example is one or more serum lipid profile tests known in the art. Another non-limiting example is that one or more renal function tests known in the art can be used to determine the status of the subject's C3-related renal disease or disorder before and after treating the subject with a C3 dsRNA agent of the invention. In another non-limiting example, one or more tests known in the art for acquired hemolytic anemia, hemoglobinuria, bone marrow failure, and thrombophilia (tendency to form blood clots) are used to determine C3-related disease in a subject. condition. In this example, the disease includes paroxysmal nocturnal hemoglobinuria (PNH), and the test is used to determine the level of hemolysis in a subject before and after treatment of the subject with a C3 dsRNA agent of the invention.
本發明的一些實施方案包括確定向對象施用的本發明的C3 dsRNA試劑或C3反義多核苷酸試劑來治療C3相關疾病或病症之功效的方法,其通過評估和/或監測對象中C3相關疾病或病症的一種或更多種“生理特徵”來進行。C3相關疾病或病症的生理特徵的非限制性實例是許多患者還會出現腎功能衰竭和血栓栓塞的風險增加事件。確定這種生理特徵的標準方法是本領域已知的,包括但不限於血液測試、成像研究、身體檢查等,該症候群的定義是存在溶血、肝酶升高和血小板計數低。Some embodiments of the invention include methods of determining the efficacy of a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention administered to a subject to treat a C3-related disease or disorder by assessing and/or monitoring the C3-related disease in the subject or one or more “physiological characteristics” of a condition. Non-limiting examples of physiological characteristics of C3-related diseases or conditions are that many patients also develop renal failure and an increased risk of thromboembolic events. Standard methods for determining this physiological profile are known in the art and include, but are not limited to, blood tests, imaging studies, physical examinations, etc. The syndrome is defined by the presence of hemolysis, elevated liver enzymes, and low platelet count.
可以理解的是,可以至少部分地基於這種對對象確定的疾病和/或病症狀態和/或生理特徵的測定結果來修改向對象施用的C3 dsRNA試劑或C3反義多核苷酸劑的量。治療量可以通過例如以下方式改變:通過改變施用C3 dsRNA試劑或C3反義多核苷酸劑的組合物、通過改變給藥途徑、通過改變給藥時間等,來增加或減少C3-dsRNA試劑或C3反義多核苷酸試劑的量。C3 dsRNA試劑或C3反義多核苷酸劑的有效量將隨著所治療的特定病症、所治療對象的年齡和身體狀况、病情的嚴重程度、治療的持續時間、共同治療的性質(如果有的話)、具體的給藥途徑以及健康從業者知識和專業知識範圍內的其他因素而變化。例如,有效量可取決於對治療C3相關疾病或病症有效的C3多肽活性和/或C3基因表達的所需水平。技術人員可以憑經驗確定用於本發明方法的特定C3 dsRNA試劑或C3反義多核苷酸試劑的有效量,而無需過度實驗。結合本文提供的教導,通過從本發明的多種C3 dsRNA試劑或C3反義多核苷酸試劑中進行選擇,並權衡例如效力、相對生物利用度、患者體重、不良副作用的嚴重程度和優選的給藥方式等因素,可以規劃有效的預防性或治療性治療方案以有效治療特定對象。如在本發明的實施方案中使用的,本發明的C3 dsRNA試劑或C3反義多核苷酸試劑的有效量可以是當與細胞接觸時在細胞中産生所需生物學效應的量。It will be appreciated that the amount of C3 dsRNA agent or C3 antisense polynucleotide agent administered to a subject may be modified based at least in part on such determination of the subject's determined disease and/or disorder state and/or physiological characteristics. The therapeutic amount can be altered by, for example, increasing or decreasing the C3-dsRNA agent or C3 by changing the composition with which the C3 dsRNA agent or C3 antisense polynucleotide agent is administered, by changing the route of administration, by changing the time of administration, etc. Amount of antisense polynucleotide reagent. The effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent will vary depending on the specific condition being treated, the age and medical condition of the subject being treated, the severity of the condition, the duration of treatment, the nature of co-treatments, if any vary), the specific route of administration, and other factors within the health practitioner's knowledge and expertise. For example, the effective amount may depend on the desired level of C3 polypeptide activity and/or C3 gene expression effective in treating a C3-related disease or disorder. The skilled artisan can empirically determine the effective amount of a particular C3 dsRNA reagent or C3 antisense polynucleotide reagent for use in the methods of the invention without undue experimentation. In conjunction with the teachings provided herein, by selecting from among the various C3 dsRNA agents or C3 antisense polynucleotide agents of the invention and weighing, for example, potency, relative bioavailability, patient weight, severity of adverse side effects, and preferred dosing Factors such as modality, can plan an effective preventive or curative treatment plan to effectively treat a specific subject. As used in embodiments of the invention, an effective amount of a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention may be an amount that produces a desired biological effect in the cell when contacted with the cell.
應當認識到,C3基因沉默可以在表達C3的任何細胞中通過組成型或通過基因組工程進行,並通過任何合適的測定來確定。在本發明的一些實施方案中,通過施用本發明的C3 dsRNA試劑,C3基因表達降低至少5%、6%、7%、8%、9%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或100%。在本發明的一些實施方案中,通過施用本發明的C3 dsRNA試劑,C3基因表達減少5%至10%、5%至25%、10%至50%、10%至75%、25%至75%、25%至100%或50%至100%。 給藥 It will be appreciated that C3 gene silencing can be performed constitutively or by genome engineering in any cell expressing C3 and determined by any suitable assay. In some embodiments of the invention, C3 gene expression is reduced by at least 5%, 6%, 7%, 8%, 9%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95% or 100%. In some embodiments of the invention, by administering the C3 dsRNA agent of the invention, C3 gene expression is reduced by 5% to 10%, 5% to 25%, 10% to 50%, 10% to 75%, 25% to 75% %, 25% to 100% or 50% to 100%. Give medication
C3 dsRNA試劑和C3反義多核苷酸試劑以足以抑制C3基因表達的劑量在藥物組合物中遞送。在本發明的某些實施方案中,C3 dsRNA試劑或C3反義多核苷酸劑的劑量爲每千克接受者體重每天0.01至200.0毫克,一般爲每天1至50mg/kg體重、5至40mg/kg體重、10至30mg/kg體重、1至20mg/kg體重、1至10mg/kg體重、4至15mg/kg體重,包括端值。例如,C3 dsRNA試劑或C3反義多核苷酸試劑的每單次給藥可以以從約0.01 mg/kg、0.05 mg/kg、0.1 mg/kg、0.2 mg/kg、0.3 mg/kg、0.4 mg/kg、0.5 mg/kg、1 mg/kg、1.1 mg/kg、1.2 mg/kg、1.3 mg/kg、1.4 mg/kg、1.5 mg/kg、1.6 mg/kg、1.7 mg/kg、1.8 mg/kg、1.9 mg/kg、2 mg/kg、2.1 mg/kg、2.2 mg/kg、2.3 mg/kg、2.4 mg/kg、2.5 mg/kg、2.6 mg/kg、2.7 mg/kg、2.8 mg/kg、2.9 mg/kg、3.0 mg/kg、3.1 mg/kg、3.2 mg/kg、3.3 mg/kg、3.4 mg/kg、3.5 mg/kg、3.6 mg/kg、3.7 mg/kg、3.8 mg/kg、3.9 mg/kg、4 mg/kg、4.1 mg/kg、4.2 mg/kg、4.3 mg/kg、4.4 mg/kg、4.5 mg/kg、4.6 mg/kg、4.7 mg/kg、4.8 mg/kg、4.9 mg/kg、5 mg/kg、5.1 mg/kg、5.2 mg/kg、5.3 mg/kg、5.4 mg/kg、5.5 mg/kg、5.6 mg/kg、5.7 mg/kg、5.8 mg/kg、5.9 mg/kg、6 mg/kg、6.1 mg/kg、6.2 mg/kg、6.3 mg/kg、6.4 mg/kg、6.5 mg/kg、6.6 mg/kg、6.7 mg/kg、6.8 mg/kg、6.9 mg/kg、7 mg/kg、7.1 mg/kg、7.2 mg/kg、7.3 mg/kg、7.4 mg/kg、7.5 mg/kg、7.6 mg/kg、7.7 mg/kg、7.8 mg/kg、7.9 mg/kg、8 mg/kg、8.1 mg/kg、8.2 mg/kg、8.3 mg/kg、8.4 mg/kg、8.5 mg/kg、8.6 mg/kg、8.7 mg/kg、8.8 mg/kg、8.9 mg/kg、9 mg/kg、9.1 mg/kg、9.2 mg/kg、9.3 mg/kg、9.4 mg/kg、9.5 mg/kg、9.6 mg/kg、9.7 mg/kg、9.8 mg/kg、9.9 mg/kg、10 mg/kg、11 mg/kg、12 mg/kg、13mg/kg、14 mg/kg、15 mg/kg、16 mg/kg、17 mg/kg、18 mg/kg、19 mg/kg、20 mg/kg、21 mg/kg、22 mg/kg、23mg/kg、24 mg/kg、25 mg/kg、26 mg/kg、27 mg/kg、28 mg/kg、29 mg/kg、30 mg/kg、31 mg/kg、32 mg/kg、33mg/kg、34 mg/kg、35 mg/kg、36 mg/kg、37 mg/kg、38 mg/kg、39 mg/kg、40 mg/kg、41 mg/kg、42 mg/kg、43mg/kg、44 mg/kg、45 mg/kg、46 mg/kg、47 mg/kg、48 mg/kg、49 mg/kg至50 mg/kg體重的量來施用。The C3 dsRNA agent and C3 antisense polynucleotide agent are delivered in a pharmaceutical composition in a dose sufficient to inhibit C3 gene expression. In certain embodiments of the invention, the dosage of the C3 dsRNA agent or C3 antisense polynucleotide agent is 0.01 to 200.0 mg per kilogram of recipient body weight per day, typically 1 to 50 mg/kg body weight per day, 5 to 40 mg/kg Body weight, 10 to 30 mg/kg body weight, 1 to 20 mg/kg body weight, 1 to 10 mg/kg body weight, 4 to 15 mg/kg body weight, inclusive. For example, each single administration of a C3 dsRNA agent or C3 antisense polynucleotide agent can be administered in a dosage ranging from about 0.01 mg/kg, 0.05 mg/kg, 0.1 mg/kg, 0.2 mg/kg, 0.3 mg/kg, 0.4 mg /kg, 0.5 mg/kg, 1 mg/kg, 1.1 mg/kg, 1.2 mg/kg, 1.3 mg/kg, 1.4 mg/kg, 1.5 mg/kg, 1.6 mg/kg, 1.7 mg/kg, 1.8 mg /kg, 1.9 mg/kg, 2 mg/kg, 2.1 mg/kg, 2.2 mg/kg, 2.3 mg/kg, 2.4 mg/kg, 2.5 mg/kg, 2.6 mg/kg, 2.7 mg/kg, 2.8 mg /kg, 2.9 mg/kg, 3.0 mg/kg, 3.1 mg/kg, 3.2 mg/kg, 3.3 mg/kg, 3.4 mg/kg, 3.5 mg/kg, 3.6 mg/kg, 3.7 mg/kg, 3.8 mg /kg, 3.9 mg/kg, 4 mg/kg, 4.1 mg/kg, 4.2 mg/kg, 4.3 mg/kg, 4.4 mg/kg, 4.5 mg/kg, 4.6 mg/kg, 4.7 mg/kg, 4.8 mg /kg, 4.9 mg/kg, 5 mg/kg, 5.1 mg/kg, 5.2 mg/kg, 5.3 mg/kg, 5.4 mg/kg, 5.5 mg/kg, 5.6 mg/kg, 5.7 mg/kg, 5.8 mg /kg, 5.9 mg/kg, 6 mg/kg, 6.1 mg/kg, 6.2 mg/kg, 6.3 mg/kg, 6.4 mg/kg, 6.5 mg/kg, 6.6 mg/kg, 6.7 mg/kg, 6.8 mg /kg, 6.9 mg/kg, 7 mg/kg, 7.1 mg/kg, 7.2 mg/kg, 7.3 mg/kg, 7.4 mg/kg, 7.5 mg/kg, 7.6 mg/kg, 7.7 mg/kg, 7.8 mg /kg, 7.9 mg/kg, 8 mg/kg, 8.1 mg/kg, 8.2 mg/kg, 8.3 mg/kg, 8.4 mg/kg, 8.5 mg/kg, 8.6 mg/kg, 8.7 mg/kg, 8.8 mg /kg, 8.9 mg/kg, 9 mg/kg, 9.1 mg/kg, 9.2 mg/kg, 9.3 mg/kg, 9.4 mg/kg, 9.5 mg/kg, 9.6 mg/kg, 9.7 mg/kg, 9.8 mg /kg, 9.9 mg/kg, 10 mg/kg, 11 mg/kg, 12 mg/kg, 13mg/kg, 14 mg/kg, 15 mg/kg, 16 mg/kg, 17 mg/kg, 18 mg/ kg, 19 mg/kg, 20 mg/kg, 21 mg/kg, 22 mg/kg, 23 mg/kg, 24 mg/kg, 25 mg/kg, 26 mg/kg, 27 mg/kg, 28 mg/kg , 29 mg/kg, 30 mg/kg, 31 mg/kg, 32 mg/kg, 33 mg/kg, 34 mg/kg, 35 mg/kg, 36 mg/kg, 37 mg/kg, 38 mg/kg, 39 mg/kg, 40 mg/kg, 41 mg/kg, 42 mg/kg, 43 mg/kg, 44 mg/kg, 45 mg/kg, 46 mg/kg, 47 mg/kg, 48 mg/kg, 49 mg/kg to 50 mg/kg body weight.
在確定本發明的C3 dsRNA試劑的遞送劑量和時間時可以考慮多種因素。遞送的C3 dsRNA試劑或C3反義多核苷酸劑的絕對量將取決於多種因素,包括共同治療、劑量數和個體對象參數,包括年齡、身體狀况、體格大小和體重。這些是本領域普通技術人員衆所公知的因素,並且可以通過常規實驗解決。在一些實施方案中,可以使用最大劑量,即根據合理的醫學判斷的最高安全劑量。Various factors may be considered in determining the dose and timing of delivery of the C3 dsRNA agents of the invention. The absolute amount of C3 dsRNA agent or C3 antisense polynucleotide agent delivered will depend on a variety of factors, including co-treatment, number of doses, and individual subject parameters, including age, physical condition, size, and weight. These factors are well known to those of ordinary skill in the art and can be addressed through routine experimentation. In some embodiments, the maximum dose may be used, ie, the highest safe dose based on sound medical judgment.
在一些實施方案中,本發明的方法可包括向對象施用1、2、3、4、5、6、7、8、9、10或更多個劑量的C3 dsRNA試劑或C3反義多核苷酸試劑。在一些情况下,可以至少每天、每隔一天、每周、每隔一周、每月等向對象施用藥物化合物(例如,包含C3 dsRNA試劑或包含C3反義多核苷酸劑)的劑量,可以每天給藥一次或每天給藥多於一次,例如在一個24小時周期內給藥2、3、4、5或更多次。本發明的藥物組合物可以每天給藥一次;或者C3 dsRNA試劑或 C3 反義多核苷酸試劑可以在一天中以適當的間隔以兩個、三個或更多個亞劑量給藥,或者甚至使用連續輸注或通過控釋製劑遞送。在本發明方法的一些實施方案中,將本發明的藥物組合物每天一次或更多次、每周一次或更多次、每月一次或更多次或每年一次或更多次施用給對象。In some embodiments, methods of the invention may comprise administering to a subject 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more doses of a C3 dsRNA agent or C3 antisense polynucleotide Reagents. In some cases, a dose of a pharmaceutical compound (e.g., a C3 dsRNA-containing agent or a C3 antisense polynucleotide-containing agent) may be administered to the subject at least daily, every other day, weekly, every other week, monthly, etc., may be daily Administration may be administered once or more than once per day, for example 2, 3, 4, 5 or more times in a 24 hour period. The pharmaceutical composition of the present invention can be administered once daily; or the C3 dsRNA agent or C3 antisense polynucleotide agent can be administered in two, three or more sub-doses at appropriate intervals throughout the day, or even using Continuous infusion or delivered via controlled release formulation. In some embodiments of the methods of the invention, a pharmaceutical composition of the invention is administered to the subject once or more daily, once or more weekly, once or more monthly, or once or more annually.
在某些方面,本發明的方法包括單獨施用藥物化合物;與一種或更多種其他C3 dsRNA試劑或C3反義多核苷酸試劑組合;和/或與對患有 C3相關疾病或病症的對象施用的其他藥物療法或治療活動或方案組合。藥物化合物可以以藥物組合物的形式給藥。本發明方法中使用的藥物組合物可以是無菌的,並且含有一定量的C3 dsRNA試劑或C3反義多核苷酸試劑,其會將C3多肽的活性降低到足以在適合施用於對象的重量或體積單位中産生所需響應的水平。可以根據不同參數選擇向對象施用的包含C3 dsRNA試劑或C3反義多核苷酸劑藥物組合物的劑量以降低C3蛋白活性,特別是根據所使用的給藥方式和對象的狀態來進行選擇。其他因素包括所需的治療時間。如果對象在初始劑量下的響應不足,則可以在患者耐受性允許的範圍內採用更高的劑量(或通過不同的、更局部的遞送途徑有效地提高劑量)。 治療 In certain aspects, methods of the invention include administering a pharmaceutical compound alone; in combination with one or more other C3 dsRNA agents or C3 antisense polynucleotide agents; and/or in combination with administration to a subject suffering from a C3-related disease or disorder Other drug therapies or treatment activities or combinations of regimens. Pharmaceutical compounds can be administered in the form of pharmaceutical compositions. Pharmaceutical compositions used in the methods of the present invention may be sterile and contain an amount of a C3 dsRNA agent or C3 antisense polynucleotide agent that will reduce the activity of the C3 polypeptide sufficient to reduce the activity of the C3 polypeptide at a weight or volume suitable for administration to the subject. The level in the unit that produces the desired response. The dosage of a pharmaceutical composition comprising a C3 dsRNA agent or a C3 antisense polynucleotide agent administered to a subject to reduce C3 protein activity may be selected based on different parameters, particularly based on the mode of administration used and the state of the subject. Other factors include the length of treatment required. If the subject's response at the initial dose is insufficient, a higher dose may be administered (or the dose may be effectively increased via a different, more local delivery route) as tolerated by the patient. treatment
如本文所用的,術語“預防”或“進行預防”,當用於指將受益於C3基因表達降低的疾病、病症或其病况時,是指對象發生與此類疾病、病症或病况相關的症狀的可能性降低,所述與此類疾病、病症或病况相關的症狀是例如與由C3活化引起或與之相關的疾病或病症相關的症狀,例如C3 腎小球病 (C3G)。在這樣的情况下發生C3 腎小球病 (C3G)的可能性被降低:例如,當個體具有一種或更多種C3 腎小球病 (C3G)風險因素,其相對於具有相同風險因素且未接受本文所述治療的人群而言,未能發展出相關疾病、病症或病症,或與此類疾病、病症或病症相關的症狀的發展程度降低(例如,在臨床上患有該疾病或病症的量表上降低至少約 10%),或延遲症狀的表現(例如,延遲數天、數周、數月或數年),則被認爲是有效的預防。As used herein, the term "prevent" or "prevent," when used to refer to a disease, disorder, or condition thereof that would benefit from reduced expression of the C3 gene, refers to the subject experiencing symptoms associated with such disease, disorder, or condition. The symptoms associated with such a disease, disorder or condition are, for example, symptoms associated with a disease or disorder caused by or associated with C3 activation, such as C3 glomerulopathy (C3G). The likelihood of developing C3 glomerulopathy (C3G) is reduced in situations such as when an individual has one or more risk factors for C3 glomerulopathy (C3G) relative to someone who has the same risk factors and does not have the same risk factors. Failure to develop the disease, condition, or condition, or a reduction in the development of symptoms associated with such disease, condition, or condition (e.g., clinically suffering from the disease, condition, or condition) in a person receiving treatment described herein Prevention is considered effective if it reduces the symptoms by at least approximately 10% on the scale), or delays the manifestation of symptoms (e.g., by days, weeks, months, or years).
對於C3相關疾病和病症,其中C3多肽的水平和/或活性的降低可有效治療該疾病或病症,可以使用本發明的方法和C3 dsRNA試劑來治療以抑制C3表達。可以用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑和本發明的治療方法治療的疾病和病症的實例包括但不限於:C3 腎小球病 (C3G)、免疫複合物介導的腎小球腎炎(IC 介導的 GN)、感染後腎小球腎炎 (PIGN)、系統性紅斑狼瘡、狼瘡性腎炎、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)、非典型溶血性尿毒症候群 (aHUS)、視神經脊髓炎 (NMO)、多灶性運動神經病 (MMN)、重症肌無力症 (MG),還已知與補體功能障礙有關其他器官的疾病,例如年齡相關性黃斑變性(AMD)、類風濕性關節炎(RA)、抗中性粒細胞胞漿自身抗體相關血管炎(ANCA-AV)、牙周疾病和牙周病、瘧疾貧血、敗血症以及神經退行性疾病。此類疾病和病症在本文中可稱爲“C3相關疾病和病症”和“由C3引起和/或調節的疾病和病症”。C3-related diseases and disorders in which a reduction in the level and/or activity of a C3 polypeptide is effective in treating the disease or disorder can be treated using the methods and C3 dsRNA agents of the invention to inhibit C3 expression. Examples of diseases and conditions that can be treated with the C3 dsRNA agents or C3 antisense polynucleotide agents of the invention and the therapeutic methods of the invention include, but are not limited to: C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis Glomerulonephritis (IC-mediated GN), post-infectious glomerulonephritis (PIGN), systemic lupus erythematosus, lupus nephritis, ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH), Atypical hemolytic uremic syndrome (aHUS), neuromyelitis optica (NMO), multifocal motor neuropathy (MMN), myasthenia gravis (MG), and other organ diseases known to be associated with complement dysfunction, such as age-related macular degeneration (AMD), rheumatoid arthritis (RA), antineutrophil cytoplasmic autoantibody-associated vasculitis (ANCA-AV), periodontal disease and periodontal disease, malarial anemia, sepsis, and neurodegeneration disease. Such diseases and conditions may be referred to herein as "C3-related diseases and conditions" and "diseases and conditions caused and/or modulated by C3."
在本發明的某些方面,可以在診斷C3相關疾病或病症之前或之後的一個或更多個時間向對象施用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑。在本發明的一些方面,對象處於患有或發展C3相關疾病或病症的風險中。與發展C3相關疾病或病症的對照風險相比,有發展C3相關疾病或病症風險的對象是發展C3相關疾病或病症的可能性提高的對象。在本發明的一些實施方案中,與風險的對照水平相比,風險水平在統計上是顯著的。有風險的對象可包括,例如:是或將是具有預先存在的疾病和/或遺傳異常的對象,其使得該對象比沒有預先存在的疾病或遺傳異常的對照對象更易患C3相關疾病或病症;具有C3相關疾病或病症的家族和/或個人病史的對象;以及先前已接受C3相關疾病或病症治療的對象。應當理解,使對象對C3相關疾病或病症更易感的預先存在的疾病和/或遺傳異常可以是這樣的疾病或遺傳異常:當存在時,其先前已被確定爲與發展C3相關疾病或病症的更高可能性具有相關關係。In certain aspects of the invention, a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention can be administered to a subject at one or more times before or after diagnosis of a C3-related disease or disorder. In some aspects of the invention, the subject is at risk of suffering from or developing a C3-related disease or disorder. A subject at risk of developing a C3-related disease or condition is a subject with an increased likelihood of developing a C3-related disease or condition compared to a control risk of developing a C3-related disease or condition. In some embodiments of the invention, the level of risk is statistically significant compared to a control level of risk. A subject at risk may include, for example: a subject who is or will be a subject with a pre-existing disease and/or genetic abnormality that renders the subject more susceptible to a C3-related disease or disorder than a control subject without the pre-existing disease or genetic abnormality; Subjects with a family and/or personal history of C3-related diseases or conditions; and subjects who have been previously treated for a C3-related disease or condition. It will be understood that a pre-existing disease and/or genetic abnormality that renders a subject more susceptible to a C3-related disease or disorder may be a disease or genetic abnormality that, when present, has been previously determined to be associated with the development of a C3-related disease or disorder. Higher probability of correlation.
應當理解,可以基於個體對象的醫學狀况向對象施用C3 dsRNA試劑或C3反義多核苷酸試劑。例如,爲對象提供的醫療保健可以評估從對象獲得的樣品中測量的C3水平,並確定通過施用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑來降低對象的C3水平是可期望的。在一個非限制性實例中,可以從對象獲得生物樣品,例如血液或血清樣品,並且在樣品中確定對象的C3水平。向對象施用C3 dsRNA試劑或C3反義多核苷酸試劑,並且在給藥後從對象獲得血液或血清樣品,並且使用該樣品測定C3水平,並將該結果與對象給藥前(先前)樣品中確定的結果進行比較。與給藥前水平相比,隨後樣品中對象的C3水平降低則表明所施用的C3 dsRNA試劑或C3反義多核苷酸試劑在降低對象的C3水平方面的功效。在一個非限制性實例中,溶血可以被認爲是C3相關病症的生理特徵,即使對象沒有被診斷爲患有C3相關疾病,例如本文公開的疾病。醫療保健提供者可以監測對象的溶血的變化,作爲施用的本發明的C3 dsRNA試劑或C3反義多核苷酸劑的功效的量度。 在一個非限制性實例中,補體成分C3相關疾病是陣發性的夜間血紅蛋白尿(PNH)。 PNH 可能是經典 PNH 或 PNH 在另一種骨髓衰竭綜合症候群和/或骨髓增生異常綜合症候群 (MDS) 的情况下,例如, 血細胞減少。It will be appreciated that a C3 dsRNA agent or C3 antisense polynucleotide agent may be administered to a subject based on the individual subject's medical condition. For example, health care provided to a subject may evaluate C3 levels measured in a sample obtained from the subject and determine that it is desirable to reduce the subject's C3 levels by administering a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention. In one non-limiting example, a biological sample, such as a blood or serum sample, may be obtained from the subject and the subject's C3 level determined in the sample. Administering a C3 dsRNA reagent or C3 antisense polynucleotide reagent to a subject and obtaining a blood or serum sample from the subject after administration and using the sample to determine C3 levels and comparing the results to the subject's pre-dose (previous) sample Compare the determined results. A decrease in the subject's C3 levels in subsequent samples compared to pre-dose levels is indicative of the efficacy of the administered C3 dsRNA agent or C3 antisense polynucleotide agent in reducing the subject's C3 levels. In one non-limiting example, hemolysis may be considered a physiological characteristic of a C3-related disorder, even if the subject has not been diagnosed with a C3-related disorder, such as those disclosed herein. A healthcare provider can monitor changes in a subject's hemolysis as a measure of the efficacy of an administered C3 dsRNA agent or C3 antisense polynucleotide agent of the invention. In one non-limiting example, the complement component C3-related disease is paroxysmal nocturnal hemoglobinuria (PNH). PNH may be classic PNH or PNH in the context of another bone marrow failure syndrome and/or myelodysplastic syndrome (MDS), e.g., cytopenias.
本發明方法的某些實施方案包括調整治療,所述治療包括至少部分地基於對對象中由治療引起的C3 相關疾病或病症一種或更多種生理特徵的變化的評估,來向對象施用本發明的dsRNA試劑或C3反義多核苷酸試劑。例如,在本發明的一些實施方案中,可以確定對對象施用的本發明的dsRNA試劑或C3反義多核苷酸劑的作用,並用於幫助調節隨後向對象施用的本發明的dsRNA試劑或C3反義多核苷酸劑的量。在一個非限制性實例中,對對象施用本發明的dsRNA試劑或C3反義多核苷酸試劑,並在施用後測定對象血栓;並且至少部分基於所確定的水平,確定是否需要更高量的dsRNA試劑或C3反義多核苷酸試劑以提高所施用試劑的生理作用,例如降低或進一步降低對象的溶血。在另一個非限制性實例中,向對象施用本發明的dsRNA試劑或C3反義多核苷酸劑,並在給藥後確定對象的溶血,並且至少部分地基於所確定的水平,預期向對象施用更低量的dsRNA試劑或C3反義多核苷酸試劑。Certain embodiments of the methods of the invention include modifying a treatment comprising administering to a subject an agent of the invention based at least in part on an assessment of a change in one or more physiological characteristics of a C3-related disease or disorder in the subject resulting from the treatment. dsRNA reagent or C3 antisense polynucleotide reagent. For example, in some embodiments of the invention, the effect of a dsRNA agent or C3 antisense polynucleotide agent of the invention administered to a subject can be determined and used to help modulate subsequent administration of a dsRNA agent or C3 antisense polynucleotide agent of the invention to the subject. Amount of sense polynucleotide agent. In one non-limiting example, a dsRNA agent or a C3 antisense polynucleotide agent of the invention is administered to a subject, and the subject's thrombus is determined after administration; and based at least in part on the determined levels, it is determined whether a higher amount of dsRNA is needed agent or C3 antisense polynucleotide agent to enhance the physiological effect of the administered agent, such as reducing or further reducing hemolysis in the subject. In another non-limiting example, a dsRNA agent or C3 antisense polynucleotide agent of the invention is administered to a subject, and the subject's hemolysis is determined following administration, and based at least in part on the determined levels, administration to the subject is expected to Lower amounts of dsRNA reagent or C3 antisense polynucleotide reagent.
因此,本發明的一些實施方案包括評估由對象先前治療引起的一種或更多種生理特徵的變化,以調整隨後施用於對象的本發明的dsRNA試劑或C3反義多核苷酸劑的量。本發明方法的一些實施方案包括對C3相關疾病或病症的生理特徵的1、2、3、4、5、6或更多次測定;評估和/或監測施用的本發明的C3 dsRNA試劑或C3反義多核苷酸試劑的功效;並任選地使用所測定的結果來調整以下一項或更多項:本發明的dsRNA試劑或C3反義多核苷酸試劑治療對象中C3相關疾病或病症的劑量、給藥方案和/或給藥頻率。在本發明方法的一些實施方案中,向對象施用有效量的本發明的dsRNA試劑或C3反義多核苷酸試劑的期望結果是:與爲對象確定的先前相比,對象C3轉錄物水平、血漿C3水平、C3基因表達的降低。Accordingly, some embodiments of the invention include assessing changes in one or more physiological characteristics resulting from prior treatment of a subject to adjust the amount of a dsRNA agent or C3 antisense polynucleotide agent of the invention subsequently administered to the subject. Some embodiments of the methods of the invention include 1, 2, 3, 4, 5, 6 or more determinations of physiological characteristics of a C3-related disease or disorder; assessing and/or monitoring administered C3 dsRNA agents or C3 of the invention the efficacy of the antisense polynucleotide agent; and optionally using the results of the assay to adjust one or more of the following: the effectiveness of the dsRNA agent or C3 antisense polynucleotide agent of the invention in treating a C3-related disease or disorder in a subject Dosage, dosing regimen, and/or dosing frequency. In some embodiments of the methods of the invention, the desired outcome of administering to a subject an effective amount of a dsRNA agent or C3 antisense polynucleotide agent of the invention is: C3 transcript levels, plasma Reduction in C3 levels and C3 gene expression.
如本文所用,術語“治療”、“治療性”或“治療的”當用於C3相關疾病或病症時可指預防性治療、降低對象發展C3相關疾病或病症的可能性,並且也可以指在對象已經發展出C3相關疾病或病症之後爲了消除或降低C3相關疾病或病症的水平而進行的治療、防止C3相關疾病或病症變得更嚴重,和/或與在不存在降低對象中C3多肽活性的療法的情况下的對象相比,減緩對象中C3相關疾病或病症的進展。As used herein, the terms "treat," "therapeutic," or "therapeutic" when used in reference to a C3-related disease or disorder may refer to preventive treatment, reducing the likelihood of a subject developing a C3-related disease or disorder, and may also refer to Treatment to eliminate or reduce the level of a C3-related disease or condition after a subject has developed a C3-related disease or condition, to prevent the C3-related disease or condition from becoming more severe, and/or to reduce C3 polypeptide activity in the subject in the absence of Slowing the progression of a C3-related disease or condition in a subject compared to the subject without the therapy.
本發明的試劑、組合物和方法的某些實施方案可用於抑制C3基因表達。如本文所用,關於C3基因的表達,術語“抑制”、“沉默”、“減少”、“下調”和“敲低”是指例如通過以下一種或更多種情况改變C3基因的表達:分別與由C3基因轉錄的RNA的對照水平、所表達的C3的活性對照水平或由mRNA 翻譯的C3的對照水平相比,當細胞、細胞群、組織、器官或對象與本發明的C3 dsRNA試劑或C3反義多核苷酸試劑接觸(例如,用其處理)時,其中由基因轉錄的RNA的水平、表達的C3的活性水平,以及由細胞、細胞群、組織、器官或對象中的mRNA翻譯的C3多肽、蛋白質或蛋白質亞基的水平降低。在一些實施方案中,對照水平是未接觸C3 dsRNA試劑或C3反義多核苷酸試劑(例如用其處理)的細胞、組織、器官或對象中的水平。 施用方法 Certain embodiments of the agents, compositions, and methods of the invention can be used to inhibit C3 gene expression. As used herein, with respect to the expression of a C3 gene, the terms "inhibit,""silence,""reduce,""down-regulate" and "knockdown" refer to altering the expression of the C3 gene, for example, by one or more of the following: respectively, A control level of RNA transcribed from a C3 gene, a control level of activity of expressed C3, or a control level of C3 translated from mRNA, when a cell, cell population, tissue, organ or subject is treated with a C3 dsRNA agent of the invention or a C3 The level of RNA transcribed from the gene, the activity level of C3 expressed, and the C3 translated from the mRNA in the cell, cell population, tissue, organ, or subject upon exposure to (e.g., treatment with) an antisense polynucleotide agent Decreased levels of peptides, proteins, or protein subunits. In some embodiments, the control level is the level in a cell, tissue, organ or subject that has not been exposed to (eg, treated with) a C3 dsRNA agent or a C3 antisense polynucleotide agent. Application method
C3 dsRNA試劑或C3反義多核苷酸劑的多種給藥途徑可用於本發明的方法。特定遞送模式的選擇將至少部分取決於所治療的特定病症和治療功效所需的劑量。一般而言,本發明的方法可以使用醫學上可接受的任何給藥模式來實施,這意味著産生C3相關疾病或病症的有效治療水平而不引起臨床上不可接受的副作用的任何模式。在本發明的一些實施方案中,C3 dsRNA試劑或C3反義多核苷酸劑可以通過口服、腸內、黏膜、皮下和/或腸胃外途徑施用。術語“腸胃外”包括皮下、靜脈內、鞘內、肌內、腹膜內和胸骨內注射或輸注技術。其他途徑包括但不限於鼻(例如,通過胃鼻管)、經皮、陰道、直腸、舌下和吸入。本發明的遞送途徑可包括鞘內、心室內或顱內。在本發明的一些實施方案中,C3 dsRNA試劑或C3反義多核苷酸劑可以放置在緩釋基質中並通過將基質放置在對象中來施用。在本發明的一些方面,C3 dsRNA試劑或C3反義多核苷酸劑可以使用塗覆有靶向特定細胞或細胞器的遞送劑的奈米顆粒遞送至對象細胞。多種遞送方式、方法、試劑是本領域已知的。遞送方法和遞送劑的非限制性實例在本文別處另外提供。在本發明的一些方面,關於C3 dsRNA試劑或C3反義多核苷酸試劑的術語“遞送”可以是指:向細胞或對象施用一種或更多種“裸”C3 dsRNA試劑或C3反義多核苷酸劑序列。在本發明的某些方面,“遞送”是指通過轉染方式給予細胞或對象、將包含 C3 dsRNA 試劑或 C3 反義多核苷酸試劑的細胞遞送給對象、將編碼C3 dsRNA試劑或 C3 反義多核苷酸試劑的載體遞送到細胞和/或對象等中。使用轉染方式遞送C3 dsRNA試劑或C3反義多核苷酸劑可包括向細胞和/或對象施用載體。A variety of routes of administration of C3 dsRNA agents or C3 antisense polynucleotide agents may be used in the methods of the invention. The selection of a particular delivery mode will depend, at least in part, on the specific condition being treated and the dosage required for therapeutic efficacy. In general, the methods of the present invention may be carried out using any mode of administration that is medically acceptable, meaning any mode that produces effective therapeutic levels for a C3-related disease or condition without causing clinically unacceptable side effects. In some embodiments of the invention, a C3 dsRNA agent or C3 antisense polynucleotide agent can be administered by oral, enteral, mucosal, subcutaneous, and/or parenteral routes. The term "parenteral" includes subcutaneous, intravenous, intrathecal, intramuscular, intraperitoneal and intrasternal injection or infusion techniques. Other routes include, but are not limited to, nasal (e.g., via gastronasal tube), transdermal, vaginal, rectal, sublingual, and inhalation. Delivery routes of the present invention may include intrathecal, intraventricular, or intracranial. In some embodiments of the invention, a C3 dsRNA agent or C3 antisense polynucleotide agent can be placed in a sustained release matrix and administered by placing the matrix in a subject. In some aspects of the invention, C3 dsRNA agents or C3 antisense polynucleotide agents can be delivered to cells of a subject using nanoparticles coated with a delivery agent that targets specific cells or organelles. A variety of delivery modes, methods, and reagents are known in the art. Non-limiting examples of delivery methods and delivery agents are provided elsewhere herein. In some aspects of the invention, the term "delivery" with respect to a C3 dsRNA agent or a C3 antisense polynucleotide agent may refer to the administration of one or more "naked" C3 dsRNA agents or C3 antisense polynucleotides to a cell or subject Acid sequence. In certain aspects of the invention, "delivery" means administering to a cell or subject by transfection, delivering a cell containing a C3 dsRNA agent or a C3 antisense polynucleotide agent to a subject, or delivering a C3 dsRNA agent or C3 antisense polynucleotide encoding a C3 dsRNA agent to a subject. Carriers of polynucleotide agents are delivered to cells and/or subjects and the like. Delivery of a C3 dsRNA agent or C3 antisense polynucleotide agent using transfection may include administration of a vector to the cell and/or subject.
在本發明的一些方法中,一種或更多種C3 dsRNA試劑或C3反義多核苷酸試劑可以以製劑形式給藥,也可以在藥學上可接受的溶液中給藥,其通常可以含有藥學上可接受濃度的鹽、緩衝劑、防腐劑、相容的載體、佐劑和任選的其他治療成分。在本發明的一些實施方案中,C3 dsRNA試劑或C3反義多核苷酸劑可以與另一種治療劑一起配製成用於同時給藥。根據本發明的方法,C3 dsRNA試劑或C3反義多核苷酸試劑可以以藥物組合物的形式給藥。通常,藥物組合物包含C3 dsRNA試劑或C3反義多核苷酸劑和任選的藥學上可接受的載體。藥學上可接受的載體是本領域普通技術人員公知的。如本文所用,藥學上可接受的載體是指不干擾活性成分生物活性(例如,C3 dsRNA試劑或C3反義多核苷酸劑抑制細胞或對象中C3基因表達的能力)有效性的無毒材料。施用和遞送用於治療用途的C3dsRNA試劑或C3反義多核苷酸試劑的多種方法是本領域已知的並且可用於本發明的方法中。In some methods of the invention, one or more C3 dsRNA reagents or C3 antisense polynucleotide reagents may be administered in the form of a preparation or in a pharmaceutically acceptable solution, which may generally contain a pharmaceutically acceptable solution. Acceptable concentrations of salts, buffers, preservatives, compatible carriers, adjuvants, and optionally other therapeutic ingredients. In some embodiments of the invention, a C3 dsRNA agent or C3 antisense polynucleotide agent can be formulated with another therapeutic agent for simultaneous administration. According to the methods of the present invention, the C3 dsRNA agent or C3 antisense polynucleotide agent can be administered in the form of a pharmaceutical composition. Typically, pharmaceutical compositions comprise a C3 dsRNA agent or C3 antisense polynucleotide agent and optionally a pharmaceutically acceptable carrier. Pharmaceutically acceptable carriers are well known to those of ordinary skill in the art. As used herein, a pharmaceutically acceptable carrier refers to a nontoxic material that does not interfere with the effectiveness of the biological activity of the active ingredient (e.g., the ability of a C3 dsRNA agent or a C3 antisense polynucleotide agent to inhibit C3 gene expression in a cell or subject). Various methods of administering and delivering C3 dsRNA agents or C3 antisense polynucleotide agents for therapeutic use are known in the art and can be used in the methods of the invention.
藥學上可接受的載體包括稀釋劑、填充劑、鹽、緩衝劑、穩定劑、增溶劑和本領域公知的其他材料。示例性的藥學上可接受的載體描述於美國專利No. 5,211,657中,而其他載體是本領域技術人員已知的。這種製劑通常可以含有鹽、緩衝劑、防腐劑、相容的載體和任選的其他治療劑。用於醫藥時,該鹽應當是藥學上可接受的,但非藥學上可接受的鹽可以方便地用於製備其藥學上可接受的鹽,不排除在本發明的範圍之外。此類藥理學和藥學上可接受的鹽包括但不限於由以下酸製備的鹽:鹽酸、氫溴酸、硫酸、硝酸、磷酸、馬來酸、乙酸、水楊酸、檸檬酸、甲酸、丙二酸、琥珀酸等。此外,藥學上可接受的鹽可以製備爲鹼金屬鹽或鹼土金屬鹽,例如鈉鹽、鉀鹽或鈣鹽。Pharmaceutically acceptable carriers include diluents, fillers, salts, buffers, stabilizers, solubilizers and other materials known in the art. Exemplary pharmaceutically acceptable carriers are described in U.S. Patent No. 5,211,657, and other carriers are known to those skilled in the art. Such preparations may generally contain salts, buffers, preservatives, compatible carriers, and optionally other therapeutic agents. When used in medicine, the salt should be pharmaceutically acceptable, but non-pharmaceutically acceptable salts can be conveniently used to prepare pharmaceutically acceptable salts thereof, which are not excluded from the scope of the present invention. Such pharmacologically and pharmaceutically acceptable salts include, but are not limited to, salts prepared from the following acids: hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, maleic acid, acetic acid, salicylic acid, citric acid, formic acid, propionic acid. Diacid, succinic acid, etc. Furthermore, pharmaceutically acceptable salts may be prepared as alkali metal salts or alkaline earth metal salts, such as sodium, potassium or calcium salts.
本發明方法的一些實施方案包括將一種或更多種C3 dsRNA試劑或C3反義多核苷酸試劑直接施用於組織。在一些實施方案中,施用化合物的組織是其中存在或可能出現C3相關疾病或病症的組織,其非限制性實例是肝臟或腎臟。直接組織給藥可以通過直接注射或其他方式實現。許多口服遞送的化合物自然進入並通過肝臟和腎臟,本發明的治療方法的一些實施方案包括向對象口服施用一種或更多種C3 dsRNA試劑。C3 dsRNA試劑或C3反義多核苷酸劑,單獨或與其他治療劑聯合,可以施用一次,或者它們可以多次施用。如果多次給藥,C3 dsRNA試劑或C3反義多核苷酸劑可以通過不同途徑給藥。例如,雖然不打算限制,第一次(或前幾次)給藥可以通過皮下方式進行,並且一次或更多次額外給藥可以是口服和/或全身給藥。Some embodiments of the methods of the invention include administering one or more C3 dsRNA agents or C3 antisense polynucleotide agents directly to the tissue. In some embodiments, the tissue to which the compound is administered is a tissue in which a C3-related disease or disorder exists or may occur, non-limiting examples of which are the liver or kidneys. Direct tissue drug delivery can be achieved by direct injection or other means. Many orally delivered compounds naturally enter and pass through the liver and kidneys, and some embodiments of the treatment methods of the present invention include orally administering to a subject one or more C3 dsRNA agents. The C3 dsRNA agent or C3 antisense polynucleotide agent, alone or in combination with other therapeutic agents, can be administered once, or they can be administered multiple times. If administered multiple times, the C3 dsRNA agent or C3 antisense polynucleotide agent can be administered by different routes. For example, although not intended to be limiting, the first (or first few) administrations may be administered subcutaneously, and one or more additional administrations may be oral and/or systemic.
對於其中希望全身性施用C3 dsRNA試劑或C3反義多核苷酸劑的本發明實施方案,可以配製C3 dsRNA試劑或C3反義多核苷酸劑用於通過注射例如通過推注或連續輸注腸胃外施用。注射製劑可以以單位劑型存在,例如安瓿或多劑量容器,其添加或不添加防腐劑。C3 dsRNA試劑製劑(也稱爲藥物組合物)可採用油性或水性載體中的混懸液、溶液或乳液等形式,並且可含有配製劑,例如混懸劑、穩定劑和/或分散劑。For embodiments of the invention in which it is desired to administer the C3 dsRNA agent or C3 antisense polynucleotide agent systemically, the C3 dsRNA agent or C3 antisense polynucleotide agent may be formulated for parenteral administration by injection, for example, by bolus injection or continuous infusion. . Injectable preparations may be presented in unit dosage form such as ampoules or multi-dose containers, with or without added preservatives. C3 dsRNA agent preparations (also referred to as pharmaceutical compositions) may take the form of suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulatory agents such as suspending, stabilizing and/or dispersing agents.
腸胃外給藥的製劑包括無菌水溶液或非水溶液、混懸液和乳液。非水溶劑的例子是丙二醇、聚乙二醇、植物油如橄欖油和可注射的有機酯如油酸乙酯。水性載體包括水、酒精/水溶液、乳液或混懸液,包括鹽水和緩衝介質。腸胃外載體包括氯化鈉溶液、林格氏葡萄糖溶液、葡萄糖和氯化鈉溶液、乳酸林格氏液或固定油。靜脈內賦形劑包括流體和營養補充劑、電解質補充劑(例如基於林格氏葡萄糖溶液的那些)等。也可以存在防腐劑和其他添加劑,例如抗微生物劑、抗氧化劑、螯合劑和惰性氣體等。其他形式的給藥,例如靜脈給藥,將導致較低的劑量。如果對象在初始劑量下的反應不足,則可以在患者耐受性允許的範圍內採用更高的劑量(或通過不同的、更局部的遞送途徑有效地提高劑量)。可以根據需要每天使用多次劑量以實現一種或更多種 C3 dsRNA 試劑或 C3 反義多核苷酸試劑的適當全身或局部水平,並實現C3蛋白活性的適當降低。Formulations for parenteral administration include sterile aqueous or non-aqueous solutions, suspensions and emulsions. Examples of non-aqueous solvents are propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and injectable organic esters such as ethyl oleate. Aqueous carriers include water, alcoholic/aqueous solutions, emulsions or suspensions, including saline and buffered media. Parenteral vehicles include sodium chloride solution, Ringer's dextrose solution, dextrose and sodium chloride solution, lactated Ringer's solution, or fixed oils. Intravenous excipients include fluid and nutritional supplements, electrolyte supplements (such as those based on Ringer's dextrose solution), and the like. Preservatives and other additives such as antimicrobials, antioxidants, chelating agents, inert gases, etc. may also be present. Other forms of administration, such as intravenous administration, will result in lower doses. If the subject's response at the initial dose is inadequate, a higher dose may be administered (or the dose may be effectively increased via a different, more local delivery route) as tolerated by the patient. Multiple daily doses may be used as needed to achieve appropriate systemic or local levels of one or more C3 dsRNA agents or C3 antisense polynucleotide agents and to achieve appropriate reductions in C3 protein activity.
在其他實施方案中,本發明的方法包括使用遞送載體,例如生物相容性微粒、奈米顆粒或適合植入受體例如對象的植入物。PCT公開WO 95/24929(通過引用並入本文)中描述了可根據該方法使用的示例性可生物降解植入物,其描述了用於包含生物大分子的生物相容的、可生物降解的聚合物基質。In other embodiments, methods of the present invention include the use of a delivery vehicle, such as a biocompatible microparticle, nanoparticle, or implant suitable for implantation in a recipient, such as a subject. Exemplary biodegradable implants that may be used according to this method are described in PCT Publication WO 95/24929 (incorporated herein by reference), which describes biocompatible, biodegradable implants containing biological macromolecules. Polymer matrix.
不可生物降解的和可生物降解的聚合物基質都可用於本發明的方法中,以將一種或更多種C3 dsRNA試劑或C3反義多核苷酸試劑遞送給對象。在一些實施方案中,基質可以是可生物降解的。基質聚合物可以是天然或合成聚合物。可以基於期望釋放的時間段來選擇聚合物,通常在幾小時到一年或更長時間的數量級。通常,可以使用在幾小時到三到十二個月之間的一段時間內的釋放。聚合物任選地呈水凝膠形式,其可以吸收高達其重量約90%的水,並且還任選地與多價離子或其他聚合物交聯。Both non-biodegradable and biodegradable polymeric matrices can be used in the methods of the invention to deliver one or more C3 dsRNA agents or C3 antisense polynucleotide agents to a subject. In some embodiments, the matrix can be biodegradable. Matrix polymers can be natural or synthetic polymers. The polymer can be selected based on the period of time for which release is desired, typically on the order of a few hours to a year or more. Typically, releases for periods ranging from a few hours to three to twelve months are available. The polymer is optionally in the form of a hydrogel, which can absorb up to about 90% of its weight in water, and is optionally also cross-linked with multivalent ions or other polymers.
通常,C3 dsRNA試劑或C3反義多核苷酸試劑在本發明的一些實施方案中可以使用可生物降解的植入物通過擴散或通過聚合物基質的降解來遞送。用於這種用途的示例性合成聚合物是本領域公知的。使用本領域已知的方法,可生物降解的聚合物和不可生物降解的聚合物可用於遞送C3 dsRNA試劑或C3反義多核苷酸試劑。生物黏附聚合物如可生物侵蝕的水凝膠(H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587)也可用於遞送 C3 dsRNA試劑或C3反義多核苷酸試劑,以治療C3相關疾病或病症。其他合適的遞送系統可以包括定時釋放、延遲釋放或持續釋放遞送系統。此類系統可避免重複施用C3 dsRNA試劑或C3反義多核苷酸劑,從而提高對象和醫療保健專業人員的便利性。許多類型的釋放遞送系統是可用的並且是本領域普通技術人員已知的。見例如美國專利No. 5,075,109、4,452,775、4,675,189、5,736,152、3,854,480、5,133,974和5,407,686。此外,可以使用基於泵的硬件輸送系統,其中一些也適用於植入。Generally, C3 dsRNA agents or C3 antisense polynucleotide agents in some embodiments of the invention may be delivered by diffusion or by degradation of the polymeric matrix using biodegradable implants. Exemplary synthetic polymers for this purpose are well known in the art. Biodegradable polymers and non-biodegradable polymers can be used to deliver C3 dsRNA agents or C3 antisense polynucleotide agents using methods known in the art. Bioadhesive polymers such as bioerodible hydrogels (H. S. Sawhney, C. P. Pathak and J. A. Hubell in Macromolecules, 1993, 26, 581-587) can also be used to deliver C3 dsRNA reagents or C3 antisense polynucleotide reagents for therapeutic purposes C3 related diseases or conditions. Other suitable delivery systems may include timed release, delayed release, or sustained release delivery systems. Such systems may avoid repeated administration of C3 dsRNA reagents or C3 antisense polynucleotide agents, thereby improving convenience for subjects and healthcare professionals. Many types of release delivery systems are available and known to those of ordinary skill in the art. See, for example, U.S. Patent Nos. 5,075,109, 4,452,775, 4,675,189, 5,736,152, 3,854,480, 5,133,974, and 5,407,686. Additionally, pump-based hardware delivery systems are available, some of which are also suitable for implantation.
長期持續釋放植入物的使用可以適用於對象的預防性治療和具有發生復發性C3相關疾病或病症的風險的對象。如本文所用,長期釋放是指將植入物構建和布置成以至少長達10天、20天、30天、60天、90天、六個月、一年或更長時間遞送治療水平的C3 dsRNA 試劑或C3反義多核苷酸試劑。長期持續釋放植入物是本領域普通技術人員衆所公知的並且包括上述的一些釋放系統。The use of long-term sustained release implants may be suitable for prophylactic treatment of subjects and subjects at risk of developing recurrent C3-related diseases or conditions. As used herein, long-term release refers to implants constructed and arranged to deliver therapeutic levels of C3 for at least up to 10 days, 20 days, 30 days, 60 days, 90 days, six months, one year, or longer dsRNA reagent or C3 antisense polynucleotide reagent. Long-term sustained release implants are well known to those of ordinary skill in the art and include some of the release systems described above.
C3 dsRNA試劑或C3反義多核苷酸試劑的治療製劑可以通過將具有所需純度的分子或化合物與任選的藥學上可接受的載體、賦形劑或穩定劑[Remington's Pharmaceutical Sciences 21st edition, (2006)]以凍乾製劑或水溶液的形式混合來製備用於儲存。可接受的載體、賦形劑或穩定劑在所採用的劑量和濃度下對接受者是無毒的,並且包括緩衝劑,例如磷酸鹽、檸檬酸鹽和其他有機酸;抗氧化劑,包括抗壞血酸和蛋氨酸;防腐劑(例如十八烷基二甲基苄基氯化銨;六甲銨氯化物;苯扎氯銨、苄索氯銨;苯酚、丁醇或苯甲醇;對羥基苯甲酸酯類,例如對羥基苯甲酸甲酯或丙酯;鄰苯二酚;間苯二酚;環己醇;3-戊醇;和間甲酚);低分子量(少於約 10 個殘基)多肽;蛋白質,例如血清白蛋白、明膠或免疫球蛋白;親水性聚合物,如聚乙烯吡咯烷酮;氨基酸,例如甘氨酸、穀氨醯胺、天冬醯胺、組氨酸、精氨酸或賴氨酸;單糖、二糖和其他碳水化合物,包括葡萄糖、甘露糖或糊精;螯合劑如EDTA;蔗糖、甘露糖醇、海藻糖或山梨糖醇等糖類;形成鹽的反離子,如鈉;金屬配合物(例如,鋅-蛋白質配合物);和/或非離子表面活性劑,例如TWEEN®、PLURONICS®或聚乙二醇 (PEG)。 細胞、對象和對照 Therapeutic formulation of C3 dsRNA agents or C3 antisense polynucleotide agents can be achieved by combining the molecule or compound with the desired purity with an optional pharmaceutically acceptable carrier, excipient, or stabilizer [Remington's Pharmaceutical Sciences 21st edition, ( 2006)] are mixed for storage in the form of a lyophilized formulation or an aqueous solution. Acceptable carriers, excipients or stabilizers are non-toxic to the recipient at the doses and concentrations employed and include buffering agents such as phosphates, citrates and other organic acids; antioxidants including ascorbic acid and methionine ; Preservatives (e.g. stearyldimethylbenzyl ammonium chloride; hexamethylammonium chloride; benzalkonium chloride, benzethonium chloride; phenol, butanol or benzyl alcohol; parabens, e.g. Methyl or propyl hydroxybenzoate; catechol; resorcinol; cyclohexanol; 3-pentanol; and m-cresol); low molecular weight (less than about 10 residues) peptides; proteins, e.g. Serum albumin, gelatin or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids such as glycine, glutamine, asparagine, histidine, arginine or lysine; simple sugars, Disaccharides and other carbohydrates, including glucose, mannose or dextrin; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose or sorbitol; salt-forming counterions such as sodium; metal complexes (e.g. , zinc-protein complexes); and/or non-ionic surfactants such as TWEEN®, PLURONICS® or polyethylene glycol (PEG). cells, objects and controls
本發明的方法可以與細胞、組織、器官和/或對象結合使用。在本發明的一些方面,對象是人或脊椎動物哺乳動物,包括但不限於狗、猫、馬、牛、山羊、小鼠、大鼠和靈長類動物,例如猴。因此,本發明可用於治療人和非人對象的C3相關疾病或病症。在本發明的一些方面,對象可以是農場動物、動物園動物、馴養動物或非馴養動物,並且本發明的方法可用於獸醫預防和治療方案。在本發明的一些實施方案中,對象是人並且本發明的方法可用於人預防和治療方案。The methods of the invention can be used in conjunction with cells, tissues, organs and/or subjects. In some aspects of the invention, the subject is a human or vertebrate mammal, including but not limited to dogs, cats, horses, cattle, goats, mice, rats, and primates, such as monkeys. Accordingly, the present invention may be used to treat C3-related diseases or conditions in humans and non-human subjects. In some aspects of the invention, the subject may be a farm animal, a zoo animal, a domesticated animal, or a non-domesticated animal, and the methods of the invention may be used in veterinary preventive and therapeutic regimens. In some embodiments of the invention, the subject is a human and the methods of the invention can be used in human prophylactic and therapeutic regimens.
可應用本發明的對象的非限制性實例是被診斷患有、懷疑患有或有風險患有與以下疾病或病症相關的疾病或病症的對象:高於期望的 C3 表達和/或活性,也稱爲“升高的 C3 表達水平”。與高於期望水平的C3表達和/或活性相關的疾病和病症的非限制性實例在本文別處描述。本發明的方法可應用於在治療時已被診斷爲患有該疾病或病症的對象、與高於期望的 C3 表達和/或活性相關的對象,或被認爲處於患有或發展與高於期望的C3 表達和/或活性相關的疾病或病症的風險中的對象。在本發明的一些方面,與高於期望的C3表達和/或活性水平相關的疾病或病症是急性疾病或病症;在本發明的某些方面,與高於期望的C3表達和/或活性水平相關的疾病或病症是慢性疾病或病症。Non-limiting examples of subjects to which the present invention may be applied are subjects diagnosed with, suspected of having, or at risk of suffering from a disease or condition associated with: higher than expected C3 expression and/or activity, also Referred to as "elevated C3 expression levels". Non-limiting examples of diseases and conditions associated with higher than desired levels of C3 expression and/or activity are described elsewhere herein. The methods of the present invention may be applied to subjects who, at the time of treatment, have been diagnosed with the disease or disorder, are associated with higher than expected C3 expression and/or activity, or are thought to be suffering from or developing conditions associated with higher than expected C3 expression and/or activity. Desirably, the subject is at risk for a disease or condition associated with C3 expression and/or activity. In some aspects of the invention, the disease or condition associated with higher than desired levels of C3 expression and/or activity is an acute disease or condition; in certain aspects of the invention, the disease or condition associated with higher than desirable levels of C3 expression and/or activity The relevant disease or condition is a chronic disease or condition.
在一個非限制性實例中,將本發明的C3 dsRNA試劑施用於被診斷患有腎病,包括但是不局限於:C3 腎小球病 (C3G)、免疫複合物介導的腎小球腎炎(IC 介導的 GN)、感染後腎小球腎炎 (PIGN)、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)。本發明的方法可應用於在治療時已被診斷爲患有該疾病或病症的對象,或被認爲有患或發展該疾病或病症的風險的對象。In a non-limiting example, C3 dsRNA agents of the invention are administered to patients diagnosed with kidney disease, including but not limited to: C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis (IC mediated GN), post-infectious glomerulonephritis (PIGN), ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH). The methods of the present invention may be applied to subjects who, at the time of treatment, have been diagnosed as having the disease or condition, or who are considered to be at risk of developing or developing the disease or condition.
在另一個非限制性實例中,將本發明的C3 dsRNA試劑施用以治療指因C3被活化導致或與其相關的疾病或障礙,或其症狀或進展響應於C3失活的疾病或障礙。術語“C3相關疾病”包括因C3表達降低而受益的疾病、障礙或病症。這類疾病通常與溶血、肝酶升高和血小板計數低疾病生理特徵相關。腎病包括但是不局限於:C3 腎小球病 (C3G),免疫複合物介導的腎小球腎炎(IC 介導的 GN),感染後腎小球腎炎 (PIGN)、缺血/再灌注損傷和 IgA 腎病、陣發性夜間血紅蛋白尿 (PNH)。在某些實施方式中,C3相關疾病包括陣發性夜間血紅蛋白尿 (PNH)。In another non-limiting example, a C3 dsRNA agent of the invention is administered to treat a disease or disorder caused by or associated with activation of C3, or a disease or disorder whose symptoms or progression are in response to inactivation of C3. The term "C3-related disease" includes diseases, disorders or conditions that benefit from reduced expression of C3. These disorders are often associated with hemolysis, elevated liver enzymes, and low platelet counts as physiological features of the disease. Kidney diseases include but are not limited to: C3 glomerulopathy (C3G), immune complex-mediated glomerulonephritis (IC-mediated GN), post-infectious glomerulonephritis (PIGN), ischemia/reperfusion injury and IgA nephropathy, paroxysmal nocturnal hemoglobinuria (PNH). In certain embodiments, the C3-related disease includes paroxysmal nocturnal hemoglobinuria (PNH).
在另一個非限制性實例中,將本發明的C3 dsRNA試劑施用以治療用於抑制神經細胞中C3基因表達的分子,例如神經細胞內的神經細胞受試者,例如哺乳動物,例如患有C3相關神經退行性疾病的人,例如,阿爾茨海默病 (AD)、肌萎縮側索硬化症 (ALS)、精神分裂症、帕金森病 (PD) 和朊病毒疾病,例如克雅氏病 (CJD)。In another non-limiting example, a C3 dsRNA agent of the invention is administered to treat a molecule for inhibiting C3 gene expression in neural cells, such as neural cells in a subject, such as a mammal, such as a patient with C3 People with related neurodegenerative diseases, such as Alzheimer's disease (AD), amyotrophic lateral sclerosis (ALS), schizophrenia, Parkinson's disease (PD), and prion diseases, such as Creutzfeldt-Jakob disease ( CJD).
可應用本發明方法的細胞包括體外、體內、離體細胞。細胞可以在對象中、在培養物中和/或混懸液中,或處於任何其他合適的狀態或條件中。可以應用本發明的方法的細胞可以是:肝臟細胞(liver cell)、肝細胞(hepatocyte)、心臟細胞、胰腺細胞、心血管細胞、腎細胞或其他類型的脊椎動物細胞,包括人和非人哺乳動物細胞。在本發明的某些方面,可應用本發明方法的細胞是健康的正常細胞,其未知爲疾病細胞。在本發明的某些實施方案中,將本發明的方法和組合物應用於肝臟細胞、肝細胞、心臟細胞、胰腺細胞、心血管細胞和/或腎細胞的細胞。在本發明的某些方面,對照細胞是正常細胞,但應當理解,具有疾病或病症的細胞也可以在特定情况下用作對照細胞,例如在比較具有疾病或病症的經處理細胞與具有疾病或病症的未處理細胞的結果等的情况下。Cells to which the method of the present invention can be applied include in vitro, in vivo, and ex vivo cells. The cells may be in a subject, in culture and/or in suspension, or in any other suitable state or condition. The cells to which the method of the present invention can be applied may be: liver cells, hepatocytes, heart cells, pancreatic cells, cardiovascular cells, kidney cells or other types of vertebrate cells, including human and non-human mammalian cells. animal cells. In certain aspects of the invention, cells to which the methods of the invention can be applied are healthy normal cells that are not known to be disease cells. In certain embodiments of the invention, the methods and compositions of the invention are applied to cells of the liver, hepatocytes, heart cells, pancreatic cells, cardiovascular cells, and/or renal cells. In certain aspects of the invention, control cells are normal cells, but it should be understood that cells having a disease or disorder may also be used as control cells in certain circumstances, such as when comparing treated cells having a disease or disorder to cells having a disease or disorder. In the case of other diseases that result from untreated cells.
根據本發明的方法,可以確定C3多肽活性的水平並將其與C3多肽活性的對照水平進行比較。對照可以是預定值,其可以採取多種形式。它可以是單個截止值,例如中位數或平均值。它可以基於比較組來建立,例如在具有正常水平的C3多肽和/或C3多肽活性的組和具有增加的C3多肽和/或C3多肽活性水平的組中。比較組的另一個非限制性實例可以是具有C3相關疾病或病症的一種或更多種症狀或診斷的群體與沒有疾病或病症的一種或更多種症狀或診斷的群體;已對其施用本發明的siRNA治療的對象組與未對其施用本發明的siRNA治療的對象組。通常,對照可以基於適當年齡組中的明顯健康的正常個體或明顯健康的細胞。應當理解,除了預定值之外,根據本發明的對照可以是與實驗材料平行測試的材料樣品。示例包括來自對照群體的樣品或通過製造産生的對照樣品,以用於與實驗樣品進行平行測試。在本發明的一些實施方案中,對照可包括未用本發明的C3 dsRNA試劑接觸或處理的細胞或對象,在這種情况下,可以比較C3多肽和/或C3多肽活性的對照水平以及與本發明的C3 dsRNA試劑或C3反義多核苷酸試劑接觸的細胞或對象中C3多肽和/或C3多肽活性的水平。According to the methods of the present invention, the level of C3 polypeptide activity can be determined and compared to a control level of C3 polypeptide activity. The control can be a predetermined value, which can take many forms. It can be a single cutoff value, such as the median or mean. It may be established based on comparative groups, for example in a group with normal levels of C3 polypeptide and/or C3 polypeptide activity and in a group with increased levels of C3 polypeptide and/or C3 polypeptide activity. Another non-limiting example of a comparison group may be a population with one or more symptoms or diagnosis of a C3-related disease or disorder versus a population without one or more symptoms or diagnosis of the disease or disorder; to which the present invention has been administered The subject group treated with the siRNA of the present invention and the subject group to which the siRNA treatment of the present invention was not administered. Typically, controls can be based on apparently healthy normal individuals or apparently healthy cells in an appropriate age group. It will be understood that, in addition to predetermined values, a control according to the present invention may be a material sample tested in parallel with the experimental material. Examples include samples from control populations or control samples generated through manufacturing for parallel testing with experimental samples. In some embodiments of the invention, controls may include cells or subjects that have not been contacted or treated with a C3 dsRNA agent of the invention, in which case control levels of C3 polypeptides and/or C3 polypeptide activity may be compared to those of the invention. The level of C3 polypeptide and/or C3 polypeptide activity in a cell or subject contacted by an inventive C3 dsRNA agent or C3 antisense polynucleotide agent.
在本發明的一些實施方案中,對照水平可以是爲對象確定的C3多肽水平,其中將在不同時間爲同一對象確定的C3多肽水平與該對照水平進行比較。在一個非限制性實例中,在從未接受過本發明的C3治療的對象獲得的生物樣品中確定C3的水平。在一些實施方案中,生物樣品是血清樣品。從對象獲得的樣品中測定的C3多肽水平可作爲對象的基線或對照值。在本發明的治療方法中向對象施用一次或更多次C3 dsRNA試劑之後,可以從對象獲得一個或更多個另外的血清樣品,並且可以將隨後的一個或更多個樣品中的C3多肽水平與對象的對照/基線水平進行比較。此類比較可用於評估對象中C3相關疾病或病症的發作、進展或消退。例如,從對象獲得的基線樣品中C3多肽的水平高於在給予對象本發明的C3 dsRNA試劑或C3反義多核苷酸試劑後從同一對象獲得的水平,則表示C3相關疾病或病症的消退並且表示施用的本發明的C3 dsRNA試劑治療C3相關疾病或病症産生的功效。In some embodiments of the invention, the control level may be a C3 polypeptide level determined for a subject to which C3 polypeptide levels determined at different times for the same subject are compared. In one non-limiting example, C3 levels are determined in biological samples obtained from subjects who have not received C3 treatment of the present invention. In some embodiments, the biological sample is a serum sample. The C3 polypeptide level measured in a sample obtained from a subject may serve as a baseline or control value for the subject. After one or more administrations of a C3 dsRNA agent to a subject in a treatment method of the invention, one or more additional serum samples can be obtained from the subject, and the C3 polypeptide levels in the subsequent one or more samples can be Compare to subject's control/baseline levels. Such comparisons may be used to assess the onset, progression, or regression of C3-related diseases or conditions in a subject. For example, a C3 polypeptide level in a baseline sample obtained from a subject that is greater than the level obtained from the same subject after administration of a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention to the subject is indicative of regression of a C3-related disease or condition and Indicates the efficacy of an administered C3 dsRNA agent of the invention in treating a C3-related disease or disorder.
在本發明的某些方面,爲對象確定的C3多肽和/或C3多肽活性水平中的一個或更多個值可以作爲對照值,並用於稍後在同一對象中比較C3多肽和/或C3活性水平,從而允許評估對象中“基線”C3多肽活性的變化。因此,將初始水平用作該對象的對照水平的情况下,初始C3多肽水平和/或初始C3多肽活性水平可以用於顯示和/或確定本發明的方法和化合物在對象中所能夠降低對象中C3多肽和/或C3多肽活性的水平。In certain aspects of the invention, one or more of the C3 polypeptide and/or C3 polypeptide activity levels determined for a subject can serve as a control value and be used to later compare C3 polypeptide and/or C3 activity in the same subject. levels, thereby allowing assessment of changes in "baseline" C3 polypeptide activity in subjects. Therefore, where the initial level is used as a control level for the subject, the initial C3 polypeptide level and/or the initial C3 polypeptide activity level can be used to demonstrate and/or determine the ability of the methods and compounds of the invention to reduce the Levels of C3 polypeptide and/or C3 polypeptide activity.
使用本發明的方法,可以將本發明的C3 dsRNA試劑和/或C3反義多核苷酸試劑施用於對象。這樣的dsRNAi試劑包括例如表1中所顯示的雙鏈體AV00375至AV00447。在一些實施方案中,優選的dsRNAi試劑包括例如雙鏈體AV00375、AV00413、AV00416或AV00429,在另一些實施方案中,優選的dsRNAi試劑包括例如AV00375、AV00413、AV00416或AV00429。可以如下評估本發明的施用和治療的功效:與先前時間點從對象獲得的血清樣品中C3多肽的給藥前水平相比,或與非接觸對照水平(例如對照血清樣品中的C3多肽水平)相比,當施用和治療後,從對象獲得的血清樣品中C3多肽的水平降低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80 %、90%、95%或更多。應當理解,C3多肽的水平和C3多肽活性的水平都與C3基因表達的水平相關。本發明方法的某些實施方案包括以有效抑制C3基因表達的量向對象施用本發明的C3 dsRNA和/或C3反義試劑,從而降低對象中C3多肽的水平並降低C3多肽活性的水平。 在本發明的方法的一些實施方案中,細胞與本發明的siRNA試劑的接觸(在本文中也稱爲處理)導致細胞中C3基因表達抑制至少約1%、2%、 3%、4%、5%、6%、7%、8%、9%、10%、11%、12%、13%、14%、15%、16%、17%、18%、19% , 20%, 21%, 22%, 23%, 24%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, 35%, 36 %、37%、38%、39%、40%、41%、42%、43%、44%、45%、46%、47%、48%、49%、50%、51%、52%、 53%、54%、55%、56%、57%、58%、59%、60%、61%、62%、63%、64%、65%、66%、67%、68%、69% , 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86 %、87%、88%、89%、90%、91%、92%、93%、94%、95%、96%、97%、98%、99% 或約 100%,例如,至低於化驗檢測水平。Using the methods of the invention, a C3 dsRNA agent and/or C3 antisense polynucleotide agent of the invention can be administered to a subject. Such dsRNAi agents include, for example, duplexes AV00375 to AV00447 shown in Table 1. In some embodiments, preferred dsRNAi agents include, for example, duplexes AV00375, AV00413, AV00416, or AV00429, and in other embodiments, preferred dsRNAi agents include, for example, AV00375, AV00413, AV00416, or AV00429. The efficacy of administration and treatment of the invention may be assessed as compared to pre-dose levels of C3 polypeptide in serum samples obtained from the subject at previous time points, or to non-exposure control levels (e.g., C3 polypeptide levels in control serum samples) Compared to, when administered and after treatment, the level of C3 polypeptide in serum samples obtained from the subject is reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70 %, 80%, 90%, 95% or more. It will be appreciated that both the level of C3 polypeptide and the level of C3 polypeptide activity are related to the level of C3 gene expression. Certain embodiments of the methods of the invention include administering to a subject a C3 dsRNA and/or C3 antisense agent of the invention in an amount effective to inhibit C3 gene expression, thereby reducing the level of C3 polypeptide and reducing the level of C3 polypeptide activity in the subject. In some embodiments of the methods of the invention, contacting (also referred to herein as treatment) of a cell with an siRNA agent of the invention results in an inhibition of C3 gene expression in the cell by at least about 1%, 2%, 3%, 4%, 5%, 6%, 7%, 8%, 9%, 10%, 11%, 12%, 13%, 14%, 15%, 16%, 17%, 18%, 19%, 20%, 21% , 22%, 23%, 24%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, 35%, 36%, 37%, 38 %, 39%, 40%, 41%, 42%, 43%, 44%, 45%, 46%, 47%, 48%, 49%, 50%, 51%, 52%, 53%, 54%, 55%, 56%, 57%, 58%, 59%, 60%, 61%, 62%, 63%, 64%, 65%, 66%, 67%, 68%, 69%, 70%, 71% , 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88 %, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or about 100%, for example, to below the assay detection level.
本發明的一些實施方案包括從一個或更多個對象獲得的一個或更多個生物樣品中確定C3多肽的存在、不存在和/或量(本文也稱爲水平)。該測定可用於評估本發明的治療方法的功效。例如,本發明的方法和組合物可用於確定生物樣品中C3多肽的水平,該生物樣品獲自先前用施用本發明的C3 dsRNA試劑和/或C3反義劑治療的對象。與先前時間點從對象獲得的血清樣品中C3多肽的給藥前水平相比,或與非接觸對照水平(例如對照血清樣品中的C3多肽水平)相比,當施用和治療後,從對象獲得的血清樣品中C3多肽的水平降低至少0.5%、1%、5%、10%、20%、30%、40%、50%、60%、70%、80 %、90%、95%或更多,則表明給予對象的治療的功效水平。Some embodiments of the invention include determining the presence, absence and/or amount (also referred to herein as levels) of a C3 polypeptide in one or more biological samples obtained from one or more subjects. This assay can be used to assess the efficacy of the treatment methods of the invention. For example, the methods and compositions of the invention can be used to determine the levels of C3 polypeptides in biological samples obtained from subjects previously treated with administration of a C3 dsRNA agent and/or C3 antisense agent of the invention. Compared to pre-dose levels of C3 polypeptides in serum samples obtained from the subject at previous time points, or compared to non-exposure control levels (e.g., C3 polypeptide levels in control serum samples) obtained from the subject after administration and treatment The level of C3 polypeptide in the serum sample is reduced by at least 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95% or more More indicates the level of efficacy of the treatment given to the subject.
在本發明的一些實施方案中,針對對象確定的C3相關疾病或病症的生理特徵可以作爲對照結果,並將同一對象在不同時間的生理特徵的確定結果與對照結果進行比較。在一個非限制性實例中,病理特徵溶血測量自從未給予本發明的C3治療的對象,其可用作對象的基線或對照值。在本發明的治療方法中向對象施用一次或更多次C3 dsRNA試劑之後,血細胞並分別與對象的對照/基線水平進行比較。此類比較可用於評估對象中C3相關疾病或病症的發作、進展或消退。例如,從對象獲得的基線血細胞高於在對對象施用本發明的C3 dsRNA試劑或C3反義多核苷酸試劑後從同一對象測定的血栓,則表示C3相關疾病或病症的消退並且表示施用的本發明的C3 dsRNA試劑治療C3相關疾病或病症的功效。In some embodiments of the present invention, the physiological characteristics of a C3-related disease or disorder determined for a subject can be used as a control result, and the determination of the physiological characteristics of the same subject at different times is compared with the control results. In one non-limiting example, pathological characteristic hemolysis is measured from subjects who have never been administered a C3 treatment of the invention, which can be used as a baseline or control value for the subject. After one or more administrations of a C3 dsRNA agent to a subject in a treatment method of the invention, the blood cells are compared to the subject's control/baseline levels, respectively. Such comparisons may be used to assess the onset, progression, or regression of C3-related diseases or conditions in a subject. For example, baseline blood cells obtained from a subject that are higher than thrombi determined from the same subject after administration of a C3 dsRNA agent or C3 antisense polynucleotide agent of the invention to the subject would indicate regression of the C3-related disease or disorder and would indicate that the administered Efficacy of the invented C3 dsRNA reagents in treating C3 related diseases or conditions.
本發明的一些實施方案包括使用例如但不限於以下方法確定C3相關疾病或病症的生理特徵的存在、不存在和/或變化:(1) 測量對象的血細胞;(2)評估從一名或更多名對象獲得的一份或更多份生物樣品的生理特徵;(3) 或對對象進行身體檢查。該測定可用於評估本發明的治療方法的功效。 藥盒 Some embodiments of the present invention include determining the presence, absence, and/or changes in physiological characteristics of a C3-related disease or disorder using methods such as, but not limited to: (1) measuring a subject's blood cells; (2) assessing a patient's blood cells from a patient or more Physiological characterization of one or more biological samples obtained from multiple subjects; (3) or physical examination of the subject. This assay can be used to assess the efficacy of the treatment methods of the invention. pill box
包含一種或更多種C3 dsRNA試劑和/或C3反義多核苷酸試劑及其在本發明方法中的使用說明的藥盒也在本發明的範圍內。本發明的藥盒可包含可用於治療C3相關疾病或病症的C3 dsRNA試劑、C3正義多核苷酸和C3反義多核苷酸試劑中的一種或更多種。可以製備包含一種或更多種C3 dsRNA試劑、C3正義多核苷酸和C3反義多核苷酸試劑的藥盒以用於本發明的治療方法。本發明藥盒的組分可以以水性介質或凍乾形式包裝。本發明的藥盒可以包含被分隔開以在其中封閉地收納一個或更多個容器裝置或一系列容器裝置(例如試管、小瓶、燒瓶、瓶子、注射器等)的載體。第一容器裝置或一系列容器裝置可包含一種或更多種化合物,例如C3 dsRNA試劑和/或C3正義或反義多核苷酸試劑。第二容器裝置或一系列容器裝置可包含靶向劑、標記劑、遞送劑等,其可作爲在本發明的治療方法的實施方案中施用的C3 dsRNA試劑和/或C3反義多核苷酸的一部分包括在內。Kits containing one or more C3 dsRNA reagents and/or C3 antisense polynucleotide reagents and instructions for their use in the methods of the invention are also within the scope of the invention. Kits of the invention may include one or more of a C3 dsRNA agent, a C3 sense polynucleotide, and a C3 antisense polynucleotide agent useful in treating C3-related diseases or disorders. Kits containing one or more C3 dsRNA reagents, C3 sense polynucleotides, and C3 antisense polynucleotide reagents can be prepared for use in the treatment methods of the invention. The components of the kit of the invention may be packaged in an aqueous medium or in lyophilized form. Kits of the present invention may comprise a carrier divided to receive therein one or more container means or a series of container means (eg test tubes, vials, flasks, bottles, syringes, etc.). The first container device or series of container devices may contain one or more compounds, such as a C3 dsRNA agent and/or a C3 sense or antisense polynucleotide agent. The second container device or series of container devices may contain a targeting agent, labeling agent, delivery agent, etc., which may serve as a component of the C3 dsRNA agent and/or C3 antisense polynucleotide administered in embodiments of the treatment methods of the invention. Partially included.
本發明的藥盒還可包含說明書。說明通常採用書面形式,並且將爲執行由藥盒體現的治療和基於該治療做出決定提供指導。The kit of the present invention may also contain instructions. Instructions are usually in written form and will provide guidance for performing the treatment embodied by the pill box and making decisions based on that treatment.
提供以下實施例以說明本發明實踐的具體實例,其並不旨在限制本發明的範圍。對本領域普通技術人員來說明顯的是,本發明可應用於多種組合物和方法。 實施例 The following examples are provided to illustrate specific examples of the practice of the invention and are not intended to limit the scope of the invention. It will be apparent to one of ordinary skill in the art that the present invention is applicable to a variety of compositions and methods. Example
實施例1.RNAi試劑的合成Example 1. Synthesis of RNAi reagents
上表 2-3 中所示的 C3 RNAi 試劑雙鏈體是根據以下通用程序合成的:The C3 RNAi reagent duplexes shown in Table 2-3 above were synthesized according to the following general procedure:
使用基於亞磷醯胺化學的成熟固相合成方法,在寡核苷酸合成儀上合成siRNA的正義和反義鏈序列。寡核苷酸鏈的增長是通過4步循環實現的:去保護、縮合、加帽和用於添加每個核苷酸的氧化或硫化步驟。合成是在由可控多孔玻璃(CPG, 1000 Å)製成的固體支持物上進行的。單體亞磷醯胺購自商業來源。根據本文實施例2-3的程序合成具有GalNAc配體簇的亞磷醯胺(GLPA1、GLPA2和GLPA15作爲非限制性實例)。對於用於體外篩選的 siRNA(表2),合成是在2 μmol 規模下進行的;對於用於體內測試的 siRNA(表3),合成規模爲5 μmol 或更大。在GalNAc配體(作爲非限制性實例的 GLO-0)連接在正義鏈的3'-末端的情况下,使用連接有GalNAc配體的CPG固體支持物。在GalNAc配體(GLS-1、GLS2或GLS-15作爲非限制性實例)連接在正義鏈的5'-末端的情况下,將GalNAc亞磷醯胺(GLPA1、GLPA2或GLPA15作爲非限制性實例)用於最後的偶聯反應。將3%二氯甲烷中的三氯乙酸(TCA)用於4,4'-二甲氧基三苯甲基保護基 (DMT)的脫保護。5-乙硫基-1H-四唑用作活化劑。THF/Py/H 2O中的I 2和吡啶/MeCN中的苯乙醯二硫化物(PADS)分別用於氧化和硫化反應。在最後的固相合成步驟之後,通過用1:1體積的20wt%甲胺水溶液和28%氫氧化銨溶液處理來切割固體載體結合的低聚物並去除保護基團。爲了合成用於體外篩選的siRNA,將粗混合物濃縮。將剩餘的固體溶解在1.0 M NaOAc中,加入冰冷的EtOH以沉澱出作爲鈉鹽的單鏈産物,其無需進一步純化即可用於退火。爲了合成用於體內測試的siRNA,粗單鏈産物通過離子對反相HPLC(IP-RP-HPLC)進一步純化。通過將來自IP-RP-HPLC的純化單鏈寡核苷酸産物溶解在1.0 M NaOAc中並通過添加冰冷的 EtOH 進行沉澱,將其轉化爲鈉鹽。在水中通過等摩爾互補進行正義鏈和反義鏈寡核苷酸的退火,以形成雙鏈siRNA産物,將其凍乾以提供蓬鬆的白色固體。 siRNA sense and antisense strand sequences are synthesized on an oligonucleotide synthesizer using a well-established solid-phase synthesis method based on phosphoramidite chemistry. Oligonucleotide chain growth is achieved through a 4-step cycle: deprotection, condensation, capping, and an oxidation or sulfation step for the addition of each nucleotide. The synthesis was performed on a solid support made of controlled porous glass (CPG, 1000 Å). Monomeric phosphoramidite was purchased from commercial sources. Phosphoramidites with GalNAc ligand clusters (GLPA1, GLPA2, and GLPA15 as non-limiting examples) were synthesized according to the procedures of Examples 2-3 herein. For siRNA for in vitro screening (Table 2), synthesis was performed at a 2 μmol scale; for siRNA for in vivo testing (Table 3), synthesis was performed at a scale of 5 μmol or larger. In the case where a GalNAc ligand (GLO-0 as a non-limiting example) is attached to the 3'-end of the sense strand, a CPG solid support to which the GalNAc ligand is attached is used. In the case where a GalNAc ligand (GLPA1, GLS2 or GLS-15 as a non-limiting example) is attached to the 5'-end of the sense strand, a GalNAc phosphoramidite (GLPA1, GLPA2 or GLPA15 as a non-limiting example) ) for the final coupling reaction. Trichloroacetic acid (TCA) in 3% dichloromethane was used for deprotection of the 4,4'-dimethoxytrityl protecting group (DMT). 5-Ethylthio-1H-tetrazole was used as activator. I in THF/Py/H 2 O and phenylacetyl disulfide (PADS) in pyridine / MeCN were used for the oxidation and sulfidation reactions, respectively. After the final solid-phase synthesis step, the solid support-bound oligomers were cleaved and protecting groups were removed by treatment with a 1:1 volume of 20 wt% aqueous methylamine and 28% ammonium hydroxide solution. To synthesize siRNA for in vitro screening, the crude mixture was concentrated. The remaining solid was dissolved in 1.0 M NaOAc and ice-cold EtOH was added to precipitate the single-chain product as a sodium salt, which was used for annealing without further purification. To synthesize siRNA for in vivo testing, the crude single-stranded product was further purified by ion pair reversed-phase HPLC (IP-RP-HPLC). Convert the purified single-stranded oligonucleotide product from IP-RP-HPLC to its sodium salt by dissolving it in 1.0 M NaOAc and precipitating it by adding ice-cold EtOH. Annealing of sense and antisense strand oligonucleotides is performed by equimolar complementation in water to form a double-stranded siRNA product, which is lyophilized to provide a fluffy white solid.
實施例2.中間體-A和中間體-B的製備Example 2. Preparation of Intermediate-A and Intermediate-B
如以下方案1所示,通過在二氯甲烷(DCM)中用三甲基甲矽烷基三氟甲磺酸酯(TMSOTf)處理市售的半乳糖胺五乙酸酯來合成中間體-A。然後用Cbz保護的2-(2-氨基乙氧基)乙-1-醇進行糖基化,得到化合物II。通過氫化除去Cbz保護基團以提供作爲三氟乙酸鹽(TFA)鹽的中間體-A。除了使用Cbz保護的2-(2-(2-氨基乙氧基)乙氧基)乙-1-醇作爲原料之外,中間體B基於相同的方案合成。 中間體-A 中間體-B 方案1 Intermediate-A was synthesized by treating commercially available galactosamine pentaacetate with trimethylsilyl triflate (TMSOTf) in dichloromethane (DCM) as shown in Scheme 1 below. Glycosylation with Cbz-protected 2-(2-aminoethoxy)ethan-1-ol then provided compound II. The Cbz protecting group is removed by hydrogenation to provide Intermediate-A as the trifluoroacetate (TFA) salt. Intermediate B was synthesized based on the same protocol except using Cbz protected 2-(2-(2-aminoethoxy)ethoxy)ethan-1-ol as starting material. Intermediate-A Intermediate-B plan 1
向化合物I(20.0 g, 51.4 mmol)在 100 mL 1,2-二氯乙烷(DCE)中的溶液中加入TMSOTf(17.1 g, 77.2 mmol)。將所得反應溶液在60℃下攪拌2小時,然後在25℃下攪拌1小時;Cbz保護的2-(2-氨基乙氧基)乙-1-醇(13.5 g, 56.5 mmol)在DCE(100 mL)中用4 Å粉末分子篩(10 g)乾燥,在N 2氣氛下在0℃滴加到上述反應溶液中。在N 2氣氛下,將所得反應混合物在25℃下攪拌16小時。過濾反應混合物並用飽和NaHCO 3(200mL)、水(200mL)和飽和鹽水(200mL)洗滌。有機層經無水Na 2SO 4乾燥,過濾並減壓濃縮,得到粗産物,將其與2-甲基四氫呋喃/庚烷(5/3,v/v,1.80L)一起研磨2小時。將所得混合物過濾並乾燥以得到呈白色固體狀的化合物II(15.0g,産率50.3%)。 To a solution of compound I (20.0 g, 51.4 mmol) in 100 mL 1,2-dichloroethane (DCE) was added TMSOTf (17.1 g, 77.2 mmol). The resulting reaction solution was stirred at 60°C for 2 hours and then at 25°C for 1 hour; Cbz-protected 2-(2-aminoethoxy)ethan-1-ol (13.5 g, 56.5 mmol) was dissolved in DCE (100 mL), dried with 4 Å powdered molecular sieve (10 g), and added dropwise to the above reaction solution at 0 °C under N2 atmosphere. The resulting reaction mixture was stirred at 25 °C for 16 h under N2 atmosphere. The reaction mixture was filtered and washed with saturated NaHCO3 (200 mL), water (200 mL) and saturated brine (200 mL). The organic layer was dried over anhydrous Na2SO4 , filtered and concentrated under reduced pressure to obtain the crude product, which was triturated with 2-methyltetrahydrofuran/heptane (5/3, v/v, 1.80L) for 2 hours. The resulting mixture was filtered and dried to obtain compound II as a white solid (15.0 g, yield 50.3%).
將 10% Pd/C(1.50 g)小心地加入到乾燥和氬氣吹掃的氫化瓶中,然後加入10毫升四氫呋喃(THF),然後是化合物II(15.0克,26.4毫摩爾)在THF(300毫升)和TFA(三氟乙酸,3.00克,26.4毫摩爾)中的溶液。將所得混合物脫氣並用H2吹掃3次並在H 2(45 psi)氣氛下在25℃下攪拌3小時。薄層色譜法(TLC,溶劑:DCM:MeOH = 10:1)表明化合物II已完全消耗。過濾反應混合物並減壓濃縮。將殘餘物溶解在無水DCM(500mL)中並濃縮。該過程重複3次以得到呈泡沫狀白色固體的中間體-A(14.0g,産率96.5%)。1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (d, J = 9.29 Hz, 1 H), 7.78 (br s, 3 H), 5.23 (d, J = 3.26 Hz, 1 H), 4.98 (dd, J = 11.29, 3.26 Hz, 1 H), 4.56 (d, J = 8.53 Hz, 1 H), 3.98 - 4.07 (m, 3 H), 3.79 - 3.93 (m, 2 H), 3.55 - 3.66 (m, 5 H), 2.98 (br d, J = 4.77 Hz, 2 H), 2.11 (s, 3 H), 2.00 (s, 3 H), 1.90 (s, 3 H), 1.76 (s, 3 H)。 10% Pd/C (1.50 g) was carefully added to a dry and argon-purged hydrogenation flask, followed by 10 mL of tetrahydrofuran (THF), followed by compound II (15.0 g, 26.4 mmol) in THF (300 ml) and TFA (trifluoroacetic acid, 3.00 g, 26.4 mmol). The resulting mixture was degassed and purged 3 times with H2 and stirred at 25°C for 3 hours under a H2 (45 psi) atmosphere. Thin layer chromatography (TLC, solvent: DCM:MeOH = 10:1) showed complete consumption of compound II. The reaction mixture was filtered and concentrated under reduced pressure. The residue was dissolved in anhydrous DCM (500 mL) and concentrated. This process was repeated three times to obtain Intermediate-A as a foamy white solid (14.0 g, yield 96.5%). 1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (d, J = 9.29 Hz, 1 H), 7.78 (br s, 3 H), 5.23 (d, J = 3.26 Hz, 1 H), 4.98 (dd , J = 11.29, 3.26 Hz, 1 H), 4.56 (d, J = 8.53 Hz, 1 H), 3.98 - 4.07 (m, 3 H), 3.79 - 3.93 (m, 2 H), 3.55 - 3.66 (m , 5 H), 2.98 (br d, J = 4.77 Hz, 2 H), 2.11 (s, 3 H), 2.00 (s, 3 H), 1.90 (s, 3 H), 1.76 (s, 3 H) .
使用與合成中間體-A類似的程序合成中間體-B。1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (br d, J = 9.03 Hz, 4 H), 5.21 (d, J = 3.51 Hz, 1 H), 4.97 (dd, J = 11.1 Hz, 1 H), 4.54 (d, J = 8.53 Hz, 1 H), 3.98 - 4.06 (m, 3 H), 3.88 (dt, J = 10.9 Hz, 1 H), 3.76 - 3.83 (m, 1 H), 3.49 - 3.61 (m, 9 H), 2.97 (br s, 2 H), 2.10 (s, 3 H), 1.99 (s, 3 H), 1.88 (s, 3 H), 1.78 (s, 3 H).計算質譜C20H34N2O11: 478.22; 實測: 479.3 (M+H+)。Intermediate-B was synthesized using a similar procedure to the synthesis of Intermediate-A. 1H NMR (400 MHz DMSO-d6): δ ppm 7.90 (br d, J = 9.03 Hz, 4 H), 5.21 (d, J = 3.51 Hz, 1 H), 4.97 (dd, J = 11.1 Hz, 1 H ), 4.54 (d, J = 8.53 Hz, 1 H), 3.98 - 4.06 (m, 3 H), 3.88 (dt, J = 10.9 Hz, 1 H), 3.76 - 3.83 (m, 1 H), 3.49 - 3.61 (m, 9 H), 2.97 (br s, 2 H), 2.10 (s, 3 H), 1.99 (s, 3 H), 1.88 (s, 3 H), 1.78 (s, 3 H). Calculate Mass spectrum C20H34N2O11: 478.22; measured: 479.3 (M+H+).
實施例3.GalNAc配體簇亞磷醯胺GLPA1、GLPA2和GLPA15的合成。Example 3. Synthesis of GalNAc ligand cluster phosphoramidites GLPA1, GLPA2 and GLPA15.
按照以下方案2製備GLPA1和GLPA2。從苄基保護的丙烷-1,3-二胺開始,用2-溴乙酸叔丁酯對其進行烷基化,得到三酯化合物I。通過氫化除去苄基保護基,得到仲胺化合物II。將醯胺與6-羥基己酸偶聯得到化合物III。然後在用二氧六環中的HCl處理時除去叔丁基保護基以生成三酸化合物IV。進行三酸化合物IV和中間體-A或中間體-B之間的醯胺偶聯以提供化合物Va或Vb。亞磷醯胺GLPA1或GLPA2是通過化合物Va或Vb與2-氰乙基N,N-二異丙基氯亞磷醯胺和催化量的1H-四唑的亞磷酸化合成的。 方案2 Prepare GLPAl and GLPA2 according to Scheme 2 below. Starting from benzyl-protected propane-1,3-diamine, alkylation with tert-butyl 2-bromoacetate affords triester compound I. Removal of the benzyl protecting group by hydrogenation affords secondary amine compound II. Coupling of amide with 6-hydroxycaproic acid affords compound III. The tert-butyl protecting group is then removed upon treatment with HCl in dioxane to yield triacid compound IV. Amide coupling between triacid compound IV and Intermediate-A or Intermediate-B is performed to provide compound Va or Vb. Phosphoramidite GLPA1 or GLPA2 is synthesized by phosphorylation of compound Va or Vb with 2-cyanoethyl N,N-diisopropyl chloride phosphoramidite and a catalytic amount of 1H-tetrazole. Scenario 2
向N-苄基-1,3-丙二胺(5.00 g, 30.4 mmol)在二甲基甲醯胺(DMF, 100 mL)中的溶液中加入2-溴乙酸叔丁酯(23.7 g, 121 mmol);然後滴加二異丙基乙胺(DIEA,23.61g,182mmol)。將所得反應混合物在25-30℃攪拌16小時。 LCMS顯示 N-苄基-1,3-丙二胺被完全消耗。反應混合物用H 2O(500mL)稀釋並用EtOAc(500mL×2)萃取。合並的有機物用飽和鹽水(1L)洗滌,用無水Na 2SO 4乾燥,過濾,減壓濃縮,得到粗産物;經矽膠柱層析純化(梯度:石油醚:乙酸乙酯20:1至5:1)。獲得無色油狀化合物I(12.1g,産率78.4%)。1H NMR (400 MHz, CDCl3): δ ppm 7.26 - 7.40 (m, 5 H), 3.79 (s, 2 H), 3.43 (s, 4 H), 3.21 (s, 2 H), 2.72 (dt, J= 16.9, 7.34 Hz, 4 H), 1.70 (quin, J= 7.2 Hz, 2 H), 1.44 - 1.50 (m, 27 H)。 To a solution of N-benzyl-1,3-propanediamine (5.00 g, 30.4 mmol) in dimethylformamide (DMF, 100 mL) was added tert-butyl 2-bromoacetate (23.7 g, 121 mmol); then add diisopropylethylamine (DIEA, 23.61g, 182mmol) dropwise. The resulting reaction mixture was stirred at 25-30°C for 16 hours. LCMS showed complete consumption of N-benzyl-1,3-propanediamine. The reaction mixture was diluted with H 2 O (500 mL) and extracted with EtOAc (500 mL × 2). The combined organic matter was washed with saturated brine (1L), dried over anhydrous Na 2 SO 4 , filtered, and concentrated under reduced pressure to obtain a crude product; purified by silica gel column chromatography (gradient: petroleum ether: ethyl acetate 20:1 to 5: 1). Compound I was obtained as colorless oil (12.1 g, yield 78.4%). 1H NMR (400 MHz, CDCl3): δ ppm 7.26 - 7.40 (m, 5 H), 3.79 (s, 2 H), 3.43 (s, 4 H), 3.21 (s, 2 H), 2.72 (dt, J = 16.9, 7.34 Hz, 4 H), 1.70 (quin, J = 7.2 Hz, 2 H), 1.44 - 1.50 (m, 27 H).
乾燥的氫化瓶用氬氣吹掃3次。加入Pd/C(200mg,10%),然後加入MeOH(5mL),然後加入化合物I(1.00g,1.97mmol)在MeOH(5mL)中的溶液。反應混合物在真空下脫氣並重新填充H 2。這個過程重複3次。將混合物在H 2(15 psi)氣氛下在25℃攪拌12小時。LCMS顯示化合物I被完全消耗。在N 2氣氛下減壓過濾反應混合物。減壓濃縮濾液,得到黃色油狀化合物II(655mg,産率79.7%),其無需進一步純化即可用於下一步。1H NMR (400 MHz, CDCl3): δ ppm 3.44 (s, 4 H), 3.31 (s, 2 H), 2.78 (t, J = 7.1 Hz, 2 H), 2.68 (t, J = 6.9 Hz, 2 H), 1.88 (br s, 1 H), 1.69 (quin, J = 7.03 Hz, 2 H), 1.44 - 1.50 (s, 27 H)。 The dry hydrogenation bottle was purged three times with argon. Pd/C (200 mg, 10%) was added, followed by MeOH (5 mL), then compound I (1.00 g, 1.97 mmol) in MeOH (5 mL). The reaction mixture was degassed under vacuum and refilled with H2 . This process is repeated 3 times. The mixture was stirred at 25°C for 12 hours under an atmosphere of H2 (15 psi). LCMS showed that Compound I was completely consumed. The reaction mixture was filtered under reduced pressure under N2 atmosphere. The filtrate was concentrated under reduced pressure to obtain compound II (655 mg, yield 79.7%) as a yellow oil, which was used in the next step without further purification. 1H NMR (400 MHz, CDCl3): δ ppm 3.44 (s, 4 H), 3.31 (s, 2 H), 2.78 (t, J = 7.1 Hz, 2 H), 2.68 (t, J = 6.9 Hz, 2 H), 1.88 (br s, 1 H), 1.69 (quin, J = 7.03 Hz, 2 H), 1.44 - 1.50 (s, 27 H).
化合物II(655mg,1.57mmol)、6-羥基己酸(249mg,1.89mmol)、DIEA(1.02g,7.86mmol)、1-乙基-3-(3-二甲氨基丙基)碳二亞胺鹽酸鹽(EDCI,904mg,4.72mmol)和1-羥基苯並三唑(HOBt,637mg,4.72mmol)的DMF(6mL)溶液的混合物脫氣並用N2吹掃3次;然後在N 2氣氛下在 25℃攪拌3小時。LCMS指示所需産物。反應混合物用H 2O(10mL)稀釋並用EtOAc 20mL(10mL×2)萃取。合並有機物並用飽和鹽水(20mL)洗滌,經無水Na 2SO 4乾燥,過濾並濃縮以得到粗産物;將其通過矽膠柱色譜法(梯度:石油醚:乙酸乙酯從5:1至1:1)純化,得到呈黃色油狀的化合物III(650mg,産率77.8%)。1H NMR (400 MHz, CDCl3): δ ppm 3.90 - 3.95 (s, 2 H), 3.63 (t, J = 6.40 Hz, 2 H), 3.38 - 3.45 (m, 6 H), 2.72 (t, J = 6.65 Hz, 2 H), 2.40 (t, J = 7.28 Hz, 2 H), 1.55 - 1.75 (m, 8 H), 1.44 (s, 27 H). 計算質譜C27H50N2O8: 530.36; 實測: 531.3 (M+H +)。 Compound II (655mg, 1.57mmol), 6-hydroxycaproic acid (249mg, 1.89mmol), DIEA (1.02g, 7.86mmol), 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide A mixture of hydrochloride (EDCI, 904 mg, 4.72 mmol) and 1-hydroxybenzotriazole (HOBt, 637 mg, 4.72 mmol) in DMF (6 mL) was degassed and purged 3 times with N2; then under N2 atmosphere Stir at 25°C for 3 hours. LCMS indicated the desired product. The reaction mixture was diluted with H 2 O (10 mL) and extracted with EtOAc 20 mL (10 mL × 2). The organics were combined and washed with saturated brine ( 20 mL), dried over anhydrous Na2SO4 , filtered and concentrated to give the crude product; this was passed through silica gel column chromatography (gradient: petroleum ether: ethyl acetate from 5:1 to 1:1 ) was purified to obtain compound III (650 mg, yield 77.8%) as yellow oil. 1H NMR (400 MHz, CDCl3): δ ppm 3.90 - 3.95 (s, 2 H), 3.63 (t, J = 6.40 Hz, 2 H), 3.38 - 3.45 (m, 6 H), 2.72 (t, J = 6.65 Hz, 2 H), 2.40 (t, J = 7.28 Hz, 2 H), 1.55 - 1.75 (m, 8 H), 1.44 (s, 27 H). Calculated mass spectrum C27H50N2O8: 530.36; measured: 531.3 (M+ H + ).
將化合物III(5.5g,10.3mmol)在HCl/二氧六環(2M,55mL)中的混合物在25℃下攪拌3小時。LCMS顯示完全消耗化合物III。過濾反應混合物,用EtOAc(50mL)洗滌,減壓乾燥,得到粗産物。將其溶解在CH3CN(50mL)中,真空除去揮發物。重複該過程3次以得到呈白色固體狀的化合物IV(2.05g,産率54.5%)。 1H NMR (400 MHz, D2O): δ ppm 4.21 (s, 1 H), 4.07 (d, J = 4.5 Hz, 4 H), 3.99 (s, 1 H), 3.45 - 3.52 (m, 3 H), 3.42 (t, J = 6.5 Hz, 1 H), 3.32 - 3.38 (m, 1 H), 3.24 - 3.31 (m, 1 H), 2.37 (t, J = 7.4 Hz, 1 H), 2.24 (t, J = 7.4 Hz, 1 H), 1.99 (dt, J = 15.5, 7.53 Hz, 1 H), 1.85 - 1.94 (m, 1 H), 1.85 - 1.94 (m, 1 H), 1.39 - 1.56 (m, 4 H), 1.19 - 1.31 (m, 2 H)。 A mixture of compound III (5.5 g, 10.3 mmol) in HCl/dioxane (2M, 55 mL) was stirred at 25 °C for 3 h. LCMS showed complete consumption of compound III. The reaction mixture was filtered, washed with EtOAc (50 mL), and dried under reduced pressure to obtain crude product. Dissolve this in CH3CN (50 mL) and remove volatiles in vacuo. This process was repeated three times to obtain compound IV as a white solid (2.05 g, yield 54.5%). 1 H NMR (400 MHz, D2O): δ ppm 4.21 (s, 1 H), 4.07 (d, J = 4.5 Hz, 4 H), 3.99 (s, 1 H), 3.45 - 3.52 (m, 3 H) , 3.42 (t, J = 6.5 Hz, 1 H), 3.32 - 3.38 (m, 1 H), 3.24 - 3.31 (m, 1 H), 2.37 (t, J = 7.4 Hz, 1 H), 2.24 (t , J = 7.4 Hz, 1 H), 1.99 (dt, J = 15.5, 7.53 Hz, 1 H), 1.85 - 1.94 (m, 1 H), 1.85 - 1.94 (m, 1 H), 1.39 - 1.56 (m , 4 H), 1.19 - 1.31 (m, 2 H).
將化合物IV(500 mg, 1.05 mmol)、中間體-A(2.02 g, 3.67 mmol)、DIEA (813 mg, 6.30 mmol)、EDCI(704 mg, 3.67 mmol)和在DMF(10 毫升)中的HOBt(496 mg, 3.67 mmol)的混合物脫氣並用N 2吹掃3次,然後將混合物在N 2氣氛下在25℃攪拌3小時。LCMS 指示所需産物。通過加入H 2O(10mL)淬滅反應混合物,用DCM(10mL×2)萃取。合並的有機物用10%檸檬酸(20mL)萃取。水相用飽和NaHCO 3溶液中和並用DCM(10 mL x 2)再萃取。有機物經硫酸鈉乾燥,過濾並在減壓下濃縮以産生呈白色固體狀的化合物Va(570mg,0.281mmol,産率26.8%)。 1H NMR: (400 MHz, CDCl3) ppm δ 7.84 - 8.12 (m, 3 H), 6.85 - 7.15 (m, 2 H), 6.66 - 6.81 (m, 1 H), 5.36 (br d, J = 2.7 Hz, 3 H), 5.11 - 5.27 (m, 3 H), 4.63 - 4.85 (m, 3 H), 3.90 - 4.25 (m, 18 H), 3.37 - 3.75 (m, 28 H), 3.15 - 3.28 (m, 4 H), 2.64 (br d, J = 6.53 Hz, 2 H), 2.30 - 2.46 (m, 2 H), 2.13 - 2.18 (m, 9 H), 2.05 (s, 9 H), 1.94 - 2.03 (m, 18 H), 1.68 (br s, 2 H), 1.45 (br s, 2 H), 1.12 (br t, J = 7.0 Hz, 2 H)。 Compound IV (500 mg, 1.05 mmol), Intermediate-A (2.02 g, 3.67 mmol), DIEA (813 mg, 6.30 mmol), EDCI (704 mg, 3.67 mmol) and HOBt in DMF (10 mL) (496 mg, 3.67 mmol) was degassed and purged 3 times with N2 , and then the mixture was stirred at 25 °C under N2 atmosphere for 3 h. LCMS indicated the desired product. The reaction mixture was quenched by adding H 2 O (10 mL) and extracted with DCM (10 mL × 2). The combined organics were extracted with 10% citric acid (20 mL). The aqueous phase was neutralized with saturated NaHCO solution and re-extracted with DCM (10 mL x 2). The organics were dried over sodium sulfate, filtered and concentrated under reduced pressure to give compound Va as a white solid (570 mg, 0.281 mmol, 26.8% yield). 1 H NMR: (400 MHz, CDCl3) ppm δ 7.84 - 8.12 (m, 3 H), 6.85 - 7.15 (m, 2 H), 6.66 - 6.81 (m, 1 H), 5.36 (br d, J = 2.7 Hz, 3 H), 5.11 - 5.27 (m, 3 H), 4.63 - 4.85 (m, 3 H), 3.90 - 4.25 (m, 18 H), 3.37 - 3.75 (m, 28 H), 3.15 - 3.28 ( m, 4 H), 2.64 (br d, J = 6.53 Hz, 2 H), 2.30 - 2.46 (m, 2 H), 2.13 - 2.18 (m, 9 H), 2.05 (s, 9 H), 1.94 - 2.03 (m, 18 H), 1.68 (br s, 2 H), 1.45 (br s, 2 H), 1.12 (br t, J = 7.0 Hz, 2 H).
向化合物Va(260 mg, 0.161 mmol)的無水DCM(5 mL)溶液中加入四唑二異丙基銨(30.3 mg, 0.177 mmol);然後在環境溫度和N 2下滴加3-雙(二異丙基氨基)膦醯氧基丙腈(194 mg, 0.645 mmol)。將反應混合物在20至25℃攪拌2小時。LCMS表明化合物Va被完全消耗。冷却至-20℃後,將反應混合物在0℃加入攪拌的鹽水/飽和NaHCO 3(1:1,5mL)溶液。攪拌1分鐘後,加入DCM(5mL)。出現分層。有機層用鹽水/飽和 NaHCO 3水溶液(1:1, 5 mL)洗滌,用Na 2SO 4乾燥,過濾並濃縮至體積約1 mL。在攪拌下將殘餘溶液滴加到20mL甲基叔丁基醚(MTBE)中。這導致白色固體沉澱。將混合物離心,收集固體。將固體重新溶解在1mL DCM中並通過加入MTBE(20mL)沉澱。再次通過離心分離固體。將收集的固體溶解在無水CH3CN中。除去揮發物。該過程再重複兩次,得到呈白色固體狀的GalNAc配體亞磷醯胺化合物GLPA1(153 mg, 84.4 μmol)。1H NMR (400 MHz, CDCl3): ppm δ 7.71 - 8.06 (m, 2 H), 6.60 - 7.06 (m, 3 H), 5.37 (br d, J = 3.0 Hz, 3 H), 5.18 - 5.32 (m, 3 H), 4.70 - 4.86 (m, 3 H), 3.92 - 4.25 (m, 18 H), 3.42 - 3.85 (m, 30 H), 3.25 (m, 4 H), 2.59 - 2.75 (m, 4 H), 2.27 - 2.44 (m, 2 H), 2.15 - 2.20 (s, 9 H) 2.07 (s, 9 H), 1.96 - 2.03 (m, 18 H), 1.65 (br s, 4 H), 1.44 (br d, J = 7.28 Hz, 2 H), 1.14 - 1.24 (m, 12 H). 31P NMR (CDCl3): ppm δ 147.15. To a solution of compound Va (260 mg, 0.161 mmol) in anhydrous DCM (5 mL) was added tetrazole diisopropylammonium (30.3 mg, 0.177 mmol); then 3 -bis(diisopropylammonium) was added dropwise at ambient temperature and N Isopropylamino)phosphonyloxypropionitrile (194 mg, 0.645 mmol). The reaction mixture was stirred at 20 to 25°C for 2 hours. LCMS showed that compound Va was completely consumed. After cooling to -20°C, the reaction mixture was added to a stirred brine/saturated NaHCO 3 (1:1, 5 mL) solution at 0°C. After stirring for 1 minute, DCM (5 mL) was added. Stratification occurs. The organic layer was washed with brine/saturated aqueous NaHCO solution (1 : 1, 5 mL), dried over Na2SO4 , filtered and concentrated to a volume of approximately 1 mL. The remaining solution was added dropwise to 20 mL of methyl tert-butyl ether (MTBE) while stirring. This resulted in the precipitation of a white solid. The mixture was centrifuged and the solids were collected. The solid was redissolved in 1 mL DCM and precipitated by adding MTBE (20 mL). The solid was separated again by centrifugation. The collected solid was dissolved in anhydrous CH3CN. Remove volatiles. This process was repeated two more times to obtain the GalNAc ligand phosphoramidite compound GLPA1 (153 mg, 84.4 μmol) as a white solid. 1H NMR (400 MHz, CDCl3): ppm δ 7.71 - 8.06 (m, 2 H), 6.60 - 7.06 (m, 3 H), 5.37 (br d, J = 3.0 Hz, 3 H), 5.18 - 5.32 (m , 3 H), 4.70 - 4.86 (m, 3 H), 3.92 - 4.25 (m, 18 H), 3.42 - 3.85 (m, 30 H), 3.25 (m, 4 H), 2.59 - 2.75 (m, 4 H), 2.27 - 2.44 (m, 2 H), 2.15 - 2.20 (s, 9 H) 2.07 (s, 9 H), 1.96 - 2.03 (m, 18 H), 1.65 (br s, 4 H), 1.44 (br d, J = 7.28 Hz, 2 H), 1.14 - 1.24 (m, 12 H). 31P NMR (CDCl3): ppm δ 147.15.
除了使用中間體-B之外,使用相同的程序合成GalNAc配體亞磷醯胺化合物GLPA2。1H NMR (400 MHz, CDCl3): ppm δ 7.94 - 8.18 (m, 1 H), 7.69 (br s, 1 H), 6.66 - 7.10 (m, 3 H), 5.35 (d, J = 3.5 Hz, 3 H), 5.07 - 5.25 (m, 3 H), 4.76 - 4.86 (m, 3 H), 4.01 - 4.31 (m, 10 H), 3.91 - 4.01 (m, 8 H), 3.74 - 3.86 (m, 4 H), 3.52 - 3.71 (m, 30 H), 3.42 - 3.50 (m, 6 H), 3.15 - 3.25 (m, 4 H), 2.52 - 2.70 (m, 4 H), 2.22 - 2.45 (m, 2 H), 2.15 - 2.22 (s, 9 H), 2.06 (s, 9 H), 1.95 - 2.03 (m, 18 H), 1.77 (br s, 2 H), 1.58 - 1.66 (m, 4 H), 1.40 (m, 2 H), 1.08 - 1.24 (m, 12 H). 31P NMR (CDCl3): ppm δ 147.12。The GalNAc ligand phosphoramidite compound GLPA2 was synthesized using the same procedure except that Intermediate-B was used. 1H NMR (400 MHz, CDCl3): ppm δ 7.94 - 8.18 (m, 1 H), 7.69 (br s, 1 H), 6.66 - 7.10 (m, 3 H), 5.35 (d, J = 3.5 Hz, 3 H), 5.07 - 5.25 (m, 3 H), 4.76 - 4.86 (m, 3 H), 4.01 - 4.31 (m, 10 H), 3.91 - 4.01 (m, 8 H), 3.74 - 3.86 (m, 4 H), 3.52 - 3.71 (m, 30 H), 3.42 - 3.50 (m, 6 H), 3.15 - 3.25 (m, 4 H), 2.52 - 2.70 (m, 4 H), 2.22 - 2.45 (m, 2 H), 2.15 - 2.22 (s, 9 H), 2.06 (s, 9 H), 1.95 - 2.03 (m , 18 H), 1.77 (br s, 2 H), 1.58 - 1.66 (m, 4 H), 1.40 (m, 2 H), 1.08 - 1.24 (m, 12 H). 31P NMR (CDCl3): ppm δ 147.12.
按照以下方案3製備GLPA15。 Prepare GLPA15 following Scheme 3 below.
向中間體化合物II(275 g, 660 mmol, 1.00 當量(eq))的二氯甲烷(2.75 L)溶液中加入三乙胺(133 g, 1.32 mol, 2.00 eq.), 隨後滴加入Cbz-Cl (169 g, 990 mmol, 1.50 eq.)。反應液在25 ℃ 攪拌2小時,LCMS顯示化合物II完全轉化。反應液依次用 NaHCO3 (800 mL)飽和溶液、飽和食鹽水(500 mL)洗滌,有機相用無水Na 2SO 4乾燥。過濾除去乾燥劑後,濾液濃縮至乾。該粗品經柱層析後(SiO 2, PE/EA=100/1 to 5/1)得到無色油狀化合物III-1 (290 g, 527 mmol, 産率75.7%)。 1H NMR (400 MHz in DMSO-d6): δ ppm 7.23 - 7.40 (m, 5 H), 5.00 - 5.12 (m, 2 H), 3.86 - 3.95 (m, 2 H), 3.23 - 3.39 (m, 6 H), 2.55 - 2.67 (m, 2 H), 1.56 - 1.64 (m, 2 H), 1.31 - 1.46 (m, 27 H). MS (ESI) [M+H] +m/z: 551.6。 To a solution of intermediate compound II (275 g, 660 mmol, 1.00 equivalent (eq)) in dichloromethane (2.75 L) was added triethylamine (133 g, 1.32 mol, 2.00 eq.), and then Cbz-Cl was added dropwise (169 g, 990 mmol, 1.50 eq.). The reaction solution was stirred at 25°C for 2 hours, and LCMS showed that compound II was completely converted. The reaction solution was washed with a saturated solution of NaHCO3 (800 mL) and saturated brine (500 mL) in sequence, and the organic phase was dried over anhydrous Na 2 SO 4 . After filtering to remove the desiccant, the filtrate was concentrated to dryness. The crude product was subjected to column chromatography (SiO 2 , PE/EA=100/1 to 5/1) to obtain colorless oily compound III-1 (290 g, 527 mmol, yield 75.7%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 7.23 - 7.40 (m, 5 H), 5.00 - 5.12 (m, 2 H), 3.86 - 3.95 (m, 2 H), 3.23 - 3.39 (m, 6 H), 2.55 - 2.67 (m, 2 H), 1.56 - 1.64 (m, 2 H), 1.31 - 1.46 (m, 27 H). MS (ESI) [M+H] + m/z: 551.6.
向化合物III-1 (145 g, 263 mmol, 1.00 eq) 中加入 HCOOH (2.9 L),該溶液在 60 ℃下攪拌12小時,LCMS顯示化合物III-1轉化完全。向反應液中加入1.5 L甲苯 和1.5L乙腈,減壓濃縮至約500 mL, 隨後加入甲苯/乙腈(1:1,~750 mL) 並濃縮至約500 mL, 然後加入乙腈(~1000 mL)並濃縮至乾,粗品用700 mL乙腈在60 ℃ 粉碎2小時, 過濾。收集固體,乾燥得白色固體化合物IV-1 (105 g, 定量)。1H NMR (400 MHz in DMSO-d6): δ ppm 7.26 - 7.40 (m, 5 H), 5.02 - 5.10 (m, 2 H), 3.89 - 4.00 (m, 2 H), 3.36 - 3.45 (m, 4 H), 3.24 - 3.34 (m, 2 H), 2.59 - 2.72 (m, 2 H), 1.40 (s, 2 H). MS (ESI) [M+H] +m/z: 383.0。 HCOOH (2.9 L) was added to compound III-1 (145 g, 263 mmol, 1.00 eq ), and the solution was stirred at 60 °C for 12 hours. LCMS showed that compound III-1 was completely converted. Add 1.5 L toluene and 1.5 L acetonitrile to the reaction solution, concentrate under reduced pressure to about 500 mL, then add toluene/acetonitrile (1:1, ~750 mL) and concentrate to about 500 mL, then add acetonitrile (~1000 mL) And concentrated to dryness, the crude product was pulverized with 700 mL acetonitrile at 60°C for 2 hours and filtered. The solid was collected and dried to obtain compound IV-1 as a white solid (105 g, quantitative). 1H NMR (400 MHz in DMSO-d6): δ ppm 7.26 - 7.40 (m, 5 H), 5.02 - 5.10 (m, 2 H), 3.89 - 4.00 (m, 2 H), 3.36 - 3.45 (m, 4 H), 3.24 - 3.34 (m, 2 H), 2.59 - 2.72 (m, 2 H), 1.40 (s, 2 H). MS (ESI) [M+H] + m/z: 383.0.
向化合物IV-1 (100 g, 261 mmol .)和中間體-A (502 g, 915. mmol, 3.50 eq.) 的DMF (1.0 L)溶液中加入TBTU(327 g, 1.02 mol, 3.90 eq.), 三乙胺 (212 g, 2.09 mol, 8.00 eq.),反應在25 ℃進行1小時,LCMS顯示化合物IV-1轉化完成。將反應液加入到 4000 mL水中, 並用甲基叔丁基醚 (2000 mL 分兩次) 萃取除去雜質,剩餘水相用二氯甲烷(3000 mL 分兩次)萃取。二氯甲烷相依次用10%檸檬酸水溶液 (2000 mL 分兩次)、飽和 NaHCO3 (2.0 L 分兩次), 飽和鹽水(2.0 L)洗滌, 無水Na2SO4乾燥。過濾得濾液,減壓濃縮得到白色固體化合物V-1 (260 g, 159 mmol, 産率60.9%) 。 1H NMR (400 MHz in DMSO-d6): δ ppm 7.99 - 8.08 (m, 2 H), 7.93 (br d, J=5.50 Hz, 1 H), 7.79 - 7.86 (m, 3 H), 7.26 - 7.39 (m, 5 H), 5.22 (d, J=3.13 Hz, 3 H), 4.95 - 5.08 (m, 5 H), 4.54 (br d, J=8.38 Hz, 3 H), 4.03 (s, 9 H), 3.81 - 3.93 (m, 5 H), 3.76 (br d, J=4.88 Hz, 3 H), 3.44 - 3.62 (m, 10 H), 3.34 - 3.43 (m, 6 H), 3.24 (br d, J=6.13 Hz, 7 H), 3.02 - 3.09 (m, 4 H), 2.40 - 2.47 (m, 2 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s, 9 H), 1.77 (s, 9 H), 1.57 - 1.68 (m, 2 H)。 MS (ESI) [M+H] +m/z: 816.4。 To a solution of compound IV-1 (100 g, 261 mmol . ) and Intermediate-A (502 g, 915. mmol, 3.50 eq. ) in DMF (1.0 L) was added TBTU (327 g, 1.02 mol, 3.90 eq. ), triethylamine (212 g, 2.09 mol, 8.00 eq. ), the reaction was carried out at 25°C for 1 hour, and LCMS showed that the conversion of compound IV-1 was completed. The reaction solution was added to 4000 mL of water, and extracted with methyl tert-butyl ether (2000 mL twice) to remove impurities. The remaining aqueous phase was extracted with dichloromethane (3000 mL twice). The dichloromethane phase was washed successively with 10% citric acid aqueous solution (2000 mL divided into two times), saturated NaHCO3 (2.0 L divided into two times), saturated brine (2.0 L), and dried over anhydrous Na2SO4. The filtrate was filtered and concentrated under reduced pressure to obtain compound V-1 as a white solid (260 g, 159 mmol, yield 60.9%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 7.99 - 8.08 (m, 2 H), 7.93 (br d, J=5.50 Hz, 1 H), 7.79 - 7.86 (m, 3 H), 7.26 - 7.39 (m, 5 H), 5.22 (d, J=3.13 Hz, 3 H), 4.95 - 5.08 (m, 5 H), 4.54 (br d, J=8.38 Hz, 3 H), 4.03 (s, 9 H), 3.81 - 3.93 (m, 5 H), 3.76 (br d, J=4.88 Hz, 3 H), 3.44 - 3.62 (m, 10 H), 3.34 - 3.43 (m, 6 H), 3.24 (br d, J=6.13 Hz, 7 H), 3.02 - 3.09 (m, 4 H), 2.40 - 2.47 (m, 2 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s , 9 H), 1.77 (s, 9 H), 1.57 - 1.68 (m, 2 H). MS (ESI) [M+H] + m/z: 816.4.
用氬氣惰性化2 L氫化釜並小心加入乾Pd/C (9 g),加入 MeOH (50 mL) 潤濕Pd/C , 然後在氬氣氣氛下緩慢加入化合物V-1 (90 g, 55.1 mmol, 1.00 eq.) 和三氟乙酸 (6.29 g, 55.1 mmol, 1.00 eq.) 的MeOH (850 mL)溶液。混合物經脫氣/加H 2三次置換爲氫氣氣氛,在25 ℃攪拌10小時。LCMS顯示化合物V-1轉化完全,過濾除去Pd/C,濾液經減壓濃縮得到化合物VI-1 (80 g, 産率90.2%). 1H NMR (400 MHz in DMSO-d6): δ ppm 9.12 (br s, 2 H), 8.50 (br t, J=5.19 Hz, 1 H), 8.10 (br t, J=5.50 Hz, 2 H), 7.85 - 7.91 (m, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.95 - 5.01 (m, 3 H), 4.52 - 4.58 (m, 3 H), 4.03 (s, 9 H), 3.84 - 3.93 (m, 3 H), 3.75 - 3.83 (m, 3 H), 3.39 - 3.61 (m, 16 H), 3.23 - 3.32 (m, 6 H), 3.15 - 3.18 (m, 3 H), 2.97 - 3.05 (m, 2 H), 2.54 - 2.61 (m, 2 H), 2.10 (s, 9 H), 2.00 (s, 9 H), 1.89 (s, 9 H), 1.77 - 1.80 (m, 9 H), 1.70 - 1.76 (m, 2 H). MS (ESI) [M+H] +m/z: 749.3。 Inert the 2 L hydrogenation kettle with argon and carefully add dry Pd/C (9 g), add MeOH (50 mL) to moisten the Pd/C, and then slowly add compound V-1 (90 g, 55.1 mmol, 1.00 eq. ) and trifluoroacetic acid (6.29 g, 55.1 mmol, 1.00 eq. ) in MeOH (850 mL). The mixture was replaced with hydrogen atmosphere by degassing/adding H 2 three times, and stirred at 25°C for 10 hours. LCMS showed that compound V-1 was completely converted. Pd/C was removed by filtration, and the filtrate was concentrated under reduced pressure to obtain compound VI-1 (80 g, yield 90.2%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 9.12 (br s, 2 H), 8.50 (br t, J=5.19 Hz, 1 H), 8.10 (br t, J=5.50 Hz, 2 H), 7.85 - 7.91 (m, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.95 - 5.01 (m, 3 H), 4.52 - 4.58 (m, 3 H), 4.03 (s, 9 H), 3.84 - 3.93 (m, 3 H), 3.75 - 3.83 (m, 3 H), 3.39 - 3.61 (m, 16 H), 3.23 - 3.32 (m, 6 H), 3.15 - 3.18 (m, 3 H), 2.97 - 3.05 (m, 2 H), 2.54 - 2.61 (m, 2 H), 2.10 (s, 9 H), 2.00 (s, 9 H), 1.89 (s, 9 H), 1.77 - 1.80 (m, 9 H), 1.70 - 1.76 (m, 2 H) . MS (ESI) [M+H] + m/z: 749.3.
向化合物VI-1 (270 g, 168 mmol, 1.00 eq.)和戊二酸酐 (28.6 g, 252 mmol, 1.50 eq) 的二氯甲烷(2.7 L) 溶液中加入三乙胺(67.8 g, 672 mmol, 4.00 eq),該溶液在25 ℃ 攪拌1小時,LCMS顯示化合物VI-1完全轉化爲化合物VII。向反應液中加入4-羥基呱啶(42.4 g, 420 mmol, 2.50 eq.)和 TBTU(107 g, 335 mmol, 2.00 eq.), 並在25 ℃繼續攪拌1小時。LCMS顯示化合物VII轉化完全。 緩慢加入飽和NH4Cl (3.0 L)淬滅反應,分層,水相用二氯甲烷(2 x 1000 mL) 萃取並與先前的有機相合並。合並的有機相用飽和NaHCO3 (aq)和飽和鹽水的1:1混合液(3.0 L)洗滌,用無水Na2SO4乾燥,過濾減壓濃縮。粗品溶於1.5 L二氯甲烷, 滴加到甲基叔丁基醚 (7.5 L)中,半透明的白色沉澱在滴加過程中逐漸形成。真空過濾沉澱,收集固體真空乾燥得到白色固體化合物VIII (207 g, 産率72.8%) 。 1H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J=2.00 Hz, 2 H), 7.82 (br d, J=7.38 Hz, 3 H), 5.21 (br s, 3 H), 4.98 (br d, J=10.26 Hz, 3 H), 4.72 (br s, 1 H), 4.54 (br d, J=7.88 Hz, 3 H), 4.03 (br s, 9 H), 3.74 - 3.94 (m, 9 H), 3.45 - 3.71 (m, 12 H), 3.40 (br s, 6 H), 3.24 (br s, 7 H), 3.07 (br d, J=14.13 Hz, 5 H), 2.91 - 3.01 (m, 1 H), 2.24 - 2.44 (m, 5 H), 2.20 (br s, 1 H), 2.10 (s, 9 H), 1.96 - 2.04 (m, 9 H), 1.89 (br s, 9 H), 1.74 - 1.81 (m, 9 H), 1.51 - 1.73 (m, 6 H), 1.07 - 1.36 (m, 3 H). MS (ESI) [M+H] +m/z: 848.0。 To a solution of compound VI-1 (270 g, 168 mmol, 1.00 eq. ) and glutaric anhydride (28.6 g, 252 mmol, 1.50 eq. ) in dichloromethane (2.7 L) was added triethylamine (67.8 g, 672 mmol , 4.00 eq ), the solution was stirred at 25°C for 1 hour, and LCMS showed that compound VI-1 was completely converted into compound VII. 4-Hydroxypyridine (42.4 g, 420 mmol, 2.50 eq. ) and TBTU (107 g, 335 mmol, 2.00 eq. ) were added to the reaction solution, and stirring was continued at 25°C for 1 hour. LCMS showed complete conversion of compound VII. The reaction was quenched by slowly adding saturated NH4Cl (3.0 L), the layers were separated, and the aqueous phase was extracted with dichloromethane (2 x 1000 mL) and combined with the previous organic phase. The combined organic phases were washed with a 1:1 mixture of saturated NaHCO3 (aq) and saturated brine (3.0 L), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The crude product was dissolved in 1.5 L of methylene chloride and added dropwise to methyl tert-butyl ether (7.5 L). A translucent white precipitate gradually formed during the dropping process. The precipitate was filtered under vacuum, and the solid was collected and dried under vacuum to obtain compound VIII as a white solid (207 g, yield 72.8%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J=2.00 Hz, 2 H), 7.82 (br d, J=7.38 Hz, 3 H), 5.21 (br s, 3 H) , 4.98 (br d, J=10.26 Hz, 3 H), 4.72 (br s, 1 H), 4.54 (br d, J=7.88 Hz, 3 H), 4.03 (br s, 9 H), 3.74 - 3.94 (m, 9 H), 3.45 - 3.71 (m, 12 H), 3.40 (br s, 6 H), 3.24 (br s, 7 H), 3.07 (br d, J=14.13 Hz, 5 H), 2.91 - 3.01 (m, 1 H), 2.24 - 2.44 (m, 5 H), 2.20 (br s, 1 H), 2.10 (s, 9 H), 1.96 - 2.04 (m, 9 H), 1.89 (br s , 9 H), 1.74 - 1.81 (m, 9 H), 1.51 - 1.73 (m, 6 H), 1.07 - 1.36 (m, 3 H). MS (ESI) [M+H] + m/z: 848.0 .
向化合物 VIII (200 g, 118 mmol, 1.00 eq.)、四唑二異丙基銨 (8.08 g, 47.2 mmol, 0.40 eq) 的二氯甲烷 (2.0 L) 溶液中加入3-雙(二異丙基氨基)膦醯氧基丙腈,(53.3 g, 177 mmol, 1.50 eq.),反應液在40 ℃ 攪拌2小時,LCMS顯示化合物13轉化完成。反應液用飽和 NaHCO3 和飽和食鹽水的1:1混合液(2.0 L)洗滌, 經無水Na 2SO 4乾燥,濾液濃縮後所得粗品溶於二氯甲烷(1.2 L), 滴加到攪拌的甲基叔丁基醚 (6.0 L)中,過濾懸濁液,濾餅用基叔丁基醚淋洗,收集固體進行真空乾燥,將産品溶於二氯甲烷(1.0 L)並濃縮至乾,重複操作4次以除去殘留叔丁基醚得到GLPA15 (164 g, 産率73.3%)。 1H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J = 6.50 Hz, 2 H), 7.81 (br d, J=9.01 Hz, 3 H), 5.22 (d, J=3.25 Hz, 3 H), 4.98 (dd, J=11.26, 3.25 Hz, 3 H), 4.55 (br d, J=8.50 Hz, 3 H), 4.03 (s, 9 H), 3.64 - 3.97 (m, 12 H), 3.55 - 3.63 (m, 6 H), 3.50 (br s, 5 H), 3.40 (br d, J=6.13 Hz, 6 H), 3.17 - 3.30 (m, 9 H), 3.07 (br d, J=14.26 Hz, 4 H), 2.76 (t, J=5.82 Hz, 2 H), 2.18 - 2.47 (m, 6 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 (s, 9 H), 1.78 (s, 9 H), 1.52 - 1.74 (m, 6 H), 1.12 - 1.19 (m, 12 H). 31P NMR (DMSO-d6): ppm δ 145.25. MS (ESI) [M+H] +m/z: 1895.7。 To a solution of compound VIII (200 g, 118 mmol, 1.00 eq. ) and tetrazole diisopropylammonium (8.08 g, 47.2 mmol, 0.40 eq. ) in dichloromethane (2.0 L) was added 3-bis(diisopropyl ammonium) (53.3 g, 177 mmol, 1.50 eq.), the reaction solution was stirred at 40°C for 2 hours, and LCMS showed that the conversion of compound 13 was completed. The reaction solution was washed with a 1:1 mixture of saturated NaHCO3 and saturated brine (2.0 L), dried over anhydrous Na 2 SO 4 , and the filtrate was concentrated. The crude product obtained was dissolved in dichloromethane (1.2 L), and was added dropwise to the stirring formazan. In tert-butyl ether (6.0 L), filter the suspension, rinse the filter cake with tert-butyl ether, collect the solid and dry it under vacuum, dissolve the product in dichloromethane (1.0 L) and concentrate to dryness, repeat Operate 4 times to remove residual tert-butyl ether to obtain GLPA15 (164 g, yield 73.3%). 1 H NMR (400 MHz in DMSO-d6): δ ppm 8.05 (br d, J = 6.50 Hz, 2 H), 7.81 (br d, J=9.01 Hz, 3 H), 5.22 (d, J=3.25 Hz , 3 H), 4.98 (dd, J=11.26, 3.25 Hz, 3 H), 4.55 (br d, J=8.50 Hz, 3 H), 4.03 (s, 9 H), 3.64 - 3.97 (m, 12 H ), 3.55 - 3.63 (m, 6 H), 3.50 (br s, 5 H), 3.40 (br d, J=6.13 Hz, 6 H), 3.17 - 3.30 (m, 9 H), 3.07 (br d, J=14.26 Hz, 4 H), 2.76 (t, J=5.82 Hz, 2 H), 2.18 - 2.47 (m, 6 H), 2.10 (s, 9 H), 1.99 (s, 9 H), 1.89 ( s, 9 H), 1.78 (s, 9 H), 1.52 - 1.74 (m, 6 H), 1.12 - 1.19 (m, 12 H). 31P NMR (DMSO-d6): ppm δ 145.25. MS (ESI) [M+H] + m/z: 1895.7.
在某些研究中,提供了用於將包含GalNAc(本文也稱爲GalNAc遞送化合物)的靶向基團連接到正義鏈的5'-末端的方法,其包括在固相合成的最後一個偶聯步驟中使用GalNAc亞磷醯胺(GLPA1),使用這樣的合成工藝,例如在寡核苷酸鏈延長時使用的(即在正義鏈的5'末端添加核苷酸)工藝,以將其連接到正義鏈的5'-末端。In some studies, methods are provided for attaching a targeting group containing GalNAc (also referred to herein as a GalNAc delivery compound) to the 5'-end of the sense strand, which involves the last coupling in the solid phase synthesis The step uses GalNAc phosphoramidite (GLPA1), using a synthetic process such as that used in oligonucleotide chain extension (i.e. adding nucleotides to the 5' end of the sense strand) to attach it to 5'-end of the sense strand.
在一些研究中,將包含GalNAc的靶向基團連接到正義鏈的3'-末端的方法包括使用包含GLO-n的固體支持物(CPG)。在一些研究中,將包含GalNAc的靶向基團連接到正義鏈的 3'-末端的方法包括:將 GalNAc 靶向基團通過酯鍵連接到CPG固體支持物上,並在合成正義鏈時使用帶有連接的GalNAc靶向基團的所得CPG,這導致GalNAc靶向基團連接在正義鏈的3'-末端。 其他GalNAc亞磷醯胺化合物(GLPAn)也同樣可以在使用合理對應的中間體後,採用本文類似或者本領域中熟知的方法獲得,並作爲靶向基團連接到siRNA雙鏈體合適的位置。 實施例 4. C3 siRNA雙鏈體的體外篩選 In some studies, methods to attach a GalNAc-containing targeting group to the 3'-end of the sense strand include the use of a GLO-n-containing solid support (CPG). In some studies, methods to connect a GalNAc-containing targeting group to the 3'-end of the sense strand include: connecting the GalNAc targeting group to a CPG solid support via an ester bond and using it when synthesizing the sense strand. The resulting CPG has a GalNAc targeting group attached, which results in the GalNAc targeting group being attached to the 3'-end of the sense strand. Other GalNAc phosphoramidite compounds (GLPAn) can also be obtained using methods similar to this article or well-known in the art after using reasonably corresponding intermediates, and can be connected to the appropriate position of the siRNA duplex as a targeting group. Example 4. In vitro screening of C3 siRNA duplexes
Huh7細胞用胰蛋白酶消化並調整到合適的密度,然後接種到 96 孔板中。根據製造商的建議,在接種的同時,使用Lipofectamine RNAiMax (Invitrogen -13778-150)用測試siRNA或PBS對照轉染細胞。siRNA以兩個濃度(0.08 nM和0.6 nM)一式三份進行測試。Huh7 cells were trypsinized and adjusted to the appropriate density, then seeded into 96-well plates. Cells were transfected with test siRNA or PBS control using Lipofectamine RNAiMax (Invitrogen-13778-150) according to the manufacturer's recommendations at the same time as seeding. siRNA was tested in triplicate at two concentrations (0.08 nM and 0.6 nM).
轉染後24小時,去除培養基並收穫細胞用於RNA提取。根據手册使用TRIzol™ Reagent (Invitrogen - 15596018)提取總RNA。Twenty-four hours after transfection, the medium was removed and cells were harvested for RNA extraction. Total RNA was extracted using TRIzol™ Reagent (Invitrogen - 15596018) according to the manual.
根據手册,使用PrimeScript™ RT試劑盒和gDNA Eraser (Perfect Real Time) (TaKaRa-RR047A)合成cDNA。通過qPCR檢測C3 cDNA。平行檢測GAPDH cDNA作爲內部對照。PCR如下進行:在95 ℃下進行30秒,然後以在95 ℃下10秒、在60 ℃下30秒的循環進行40個循環。 數據分析 cDNA was synthesized using PrimeScript™ RT Reagent Kit and gDNA Eraser (Perfect Real Time) (TaKaRa-RR047A) according to the manual. Detection of C3 cDNA by qPCR. GAPDH cDNA was detected in parallel as an internal control. PCR was performed as follows: 95°C for 30 seconds, followed by 40 cycles of 95°C for 10 seconds and 60°C for 30 seconds. data analysis
使用比較性Ct(ΔΔCt)方法,通過相對定量(RQ)確定每個樣品中C3基因的表達;該方法測量靶基因和看家基因(GAPDH)之間的 Ct 差異(ΔCt)。The expression of the C3 gene in each sample was determined by relative quantification (RQ) using the comparative Ct (ΔΔCt) method; this method measures the Ct difference (ΔCt) between the target gene and the housekeeping gene (GAPDH).
方程式列出如下:The equations are listed below:
ΔCT = 靶基因平均 Ct– GAPDH平均CtΔCT = average Ct of target gene – average Ct of GAPDH
ΔΔCT=ΔCT (樣品) –ΔCT (隨機對照或Lipofectamine RNAiMax對照);ΔΔCT=ΔCT (sample) –ΔCT (random control or Lipofectamine RNAiMax control);
靶基因mRNA的相對定量 = 2^(-ΔΔCT)Relative quantification of target gene mRNA = 2^(-ΔΔCT)
抑制%= (對照的相對定量–樣品的相對定量)/對照的相對定量×100%。Inhibition % = (relative quantification of control – relative quantification of sample)/relative quantification of control × 100%.
表4提供了使用多種C3 RNAi試劑抑制C3表達的體外研究的實驗結果;使用的雙鏈序列對應於表 2 中所示的化合物。
爲了評估C3 siRNA的體內活性,使用了感染了編碼人C3和螢光素酶基因的AAV的小鼠(每組4隻小鼠)。在siRNA給藥前14天,對雌性C57BL/6J小鼠通過靜脈注射1x10^11 viral particle of 編碼人C3和螢光素酶基因的腺相關病毒8(AAV8)載體的原液來進行感染。在第0天,小鼠皮下注射單劑量3 mg/kg或者6 mg/kg的C3 siRNA試劑或PBS。在第0天siRNA給藥前和第7和14天終止時收集血樣。測量螢光素酶活性。通過比較siRNA處理組給藥前血樣的螢光素酶活性和第7,14天收集血樣的螢光素酶活性並且基於來自 PBS 處理組的血清樣品中的螢光素酶活性變化進行歸一化,以計算剩餘百分比,結果如表5所示。To evaluate the in vivo activity of C3 siRNA, mice infected with AAV encoding human C3 and luciferase genes were used (4 mice per group). Fourteen days before siRNA administration, female C57BL/6J mice were infected by intravenous injection of 1x10^11 viral particles of adeno-associated virus 8 (AAV8) vector encoding human C3 and luciferase genes. On day 0, mice were injected subcutaneously with a single dose of 3 mg/kg or 6 mg/kg C3 siRNA reagent or PBS. Blood samples were collected before siRNA administration on day 0 and at the end of days 7 and 14. Measure luciferase activity. By comparing the luciferase activity of blood samples before administration in the siRNA-treated group and the luciferase activity of blood samples collected on days 7 and 14 and normalized based on the luciferase activity changes in serum samples from the PBS-treated group , to calculate the remaining percentage, and the results are shown in Table 5.
表5.使用對應於表 3 中所示的序列、化學修飾和遞送的化合物, GLX-n爲Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961中的GalNAc3所示的遞送化合物。
爲了評估C3 siRNA的體內活性,使用了感染了編碼人C3和螢光素酶基因的AAV的小鼠(每組4隻小鼠)。在siRNA給藥前7天,對雌性C57BL/6J小鼠通過靜脈注射1x10^11 viral particle of 編碼人C3和螢光素酶基因的腺相關病毒8(AAV8)載體的原液來進行感染。在第0天,小鼠皮下注射單劑量3 mg/kg的C3 siRNA試劑或PBS。在第0天siRNA給藥前和第7天終止時收集血樣,通過siRNA處理組和PBS處理組 第7天收集血樣,用ELISA 測定法測量相對於處理前變化進行歸一化血漿樣品中的編碼人C3蛋白濃度來計算保留百分比;結果如表6-8。To evaluate the in vivo activity of C3 siRNA, mice infected with AAV encoding human C3 and luciferase genes were used (4 mice per group). Seven days before siRNA administration, female C57BL/6J mice were infected by intravenous injection of 1x10^11 viral particles of adeno-associated virus 8 (AAV8) vector encoding human C3 and luciferase genes. On day 0, mice were injected subcutaneously with a single dose of 3 mg/kg C3 siRNA reagent or PBS. Blood samples were collected before siRNA administration on day 0 and at the end of day 7 by siRNA-treated group and PBS-treated group on day 7, and normalized coding in plasma samples was measured relative to pre-treatment changes using an ELISA assay Human C3 protein concentration to calculate retention percentage; the results are shown in Table 6-8.
表6.使用對應於表 3 中所示的序列、化學修飾和遞送的化合物, GLX-n爲Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961中的GalNAc3所示的遞送化合物。
表7.使用對應於表 3 中所示的序列、化學修飾和遞送的化合物,各3 mg/kg, GLX-n爲Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961中的GalNAc3所示的遞送化合物。
表8.使用對應於表 3 中所示的序列、化學修飾和遞送的化合物,各3 mg/kg, GLX-n爲Jayaprakash , et al., (2014) J. Am. Chem. Soc., 136, 16958−16961中的GalNAc3所示的遞送化合物。
爲了評估C3 siRNA的體內活性,使用了感染了編碼人C3和螢光素酶基因的AAV的小鼠(每組4隻小鼠)。在siRNA給藥前7天,對雌性C57BL/6J小鼠通過靜脈注射1x10^11 viral particle of 編碼人C3和螢光素酶基因的腺相關病毒8(AAV8)載體的原液來進行感染。在第0天,小鼠皮下注射單劑量3 mg/kg或者6 mg/kg的C3 siRNA試劑或PBS。在第0天siRNA給藥前和第7天、14天、21天終止時收集血樣,通過siRNA處理組和PBS處理組 第7天、14天、21天收集血樣,用ELISA 測定法測量相對與處理前變化進行歸一化血漿樣品中的編碼人C3蛋白濃度來計算保留百分比;結果如表9-11。To evaluate the in vivo activity of C3 siRNA, mice infected with AAV encoding human C3 and luciferase genes were used (4 mice per group). Seven days before siRNA administration, female C57BL/6J mice were infected by intravenous injection of 1x10^11 viral particles of adeno-associated virus 8 (AAV8) vector encoding human C3 and luciferase genes. On day 0, mice were injected subcutaneously with a single dose of 3 mg/kg or 6 mg/kg C3 siRNA reagent or PBS. Blood samples were collected before siRNA administration on day 0 and at the end of days 7, 14, and 21. Blood samples were collected from the siRNA-treated group and the PBS-treated group on days 7, 14, and 21, and ELISA assay was used to measure the relative Pre-process changes were performed to normalize the concentration of the encoded human C3 protein in the plasma sample to calculate retention percentage; the results are shown in Table 9-11.
表9. 單次使用3mpk 對應於表 3 中所示的序列、化學修飾和遞送的化合物,通過ELISA測量的小鼠血漿中人C3的保留百分比。
表10. 單次使用6mpk 對應於表 3 中所示的序列、化學修飾和遞送的化合物,通過ELISA測量的小鼠血漿中人C3的保留百分比。
表11. 單次使用6mpk 對應於表 3 中所示的序列、化學修飾和遞送的化合物,通過ELISA測量的小鼠血漿中人C3的保留百分比。
儘管本文已經描述和說明了本發明的幾個實施例,但本領域普通技術人員很容易理解,用於執行此處描述的功能和/或獲得結果和/或一個或更多個優點的多種其他手段和/或結構,以及這些變化和/或修改中的每一個都被認爲在本發明的範圍內。更一般地,本領域技術人員將容易理解,此處描述的所有參數、尺寸、材料和配置都是示例性的,並且實際參數、尺寸、材料和/或配置將取決於使用本發明教導的具體應用。本領域技術人員將認識到或能夠僅使用常規實驗來確定本文描述的本發明的特定實施例的許多等價物。因此,應當理解,前述實施例僅通過示例的方式呈現並且屬所附申請專利範圍及其等效物的範圍內,本發明可以以不同於具體描述和要求保護的方式實施。本發明針對在此描述的每個單獨的特徵、系統、物品、材料和/或方法。此外,兩個或更多個此類特徵、系統、物品、材料和/或方法的任何組合,如果此類特徵、系統、物品、材料和/或方法相互不矛盾,則也包括在本發明的範圍內。Although several embodiments of the invention have been described and illustrated herein, those of ordinary skill in the art will readily appreciate that various other methods may be used to perform the functions described herein and/or to obtain the results and/or one or more advantages. Each of these changes and/or modifications, means and/or structure, and such changes and/or modifications are deemed to be within the scope of the invention. More generally, those skilled in the art will readily appreciate that all parameters, dimensions, materials, and configurations described herein are exemplary and that actual parameters, dimensions, materials, and/or configurations will depend on the specific use of the teachings of the present invention. Application. Those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments of the invention described herein. It is to be understood, therefore, that the foregoing embodiments are presented by way of example only and within the scope of the appended claims and their equivalents, the invention may be practiced otherwise than as specifically described and claimed. The present invention is directed to each individual feature, system, article, material and/or method described herein. Furthermore, any combination of two or more such features, systems, articles, materials and/or methods is also included in the invention provided that such features, systems, articles, materials and/or methods are not inconsistent with each other. within the range.
如本文所定義和使用的所有定義應理解爲對照字典定義、通過引用並入的文件中的定義和/或所定義術語的普通含義。All definitions, as defined and used herein, should be understood against dictionary definitions, definitions in documents incorporated by reference, and/or ordinary meanings of the defined terms.
在說明書和申請專利範圍中並未使用數量限定的情况,除非明確指出相反,否則應理解爲“至少一個”。Where a quantitative limitation is not used in the description and patent application, it shall be understood as "at least one" unless explicitly stated to the contrary.
說明書和申請專利範圍中使用的短語“和/或”應理解爲表示如此結合的要素中的“一個或兩個”,即這樣的要素在某些情况下組合出現而在其他情况下分離出現。除了由“和/或”具體標識的要素之外,除非明確指出相反,否則可以可選地存在其他要素,無論與那些具體標識的要素相關或不相關。The phrase "and/or" as used in the specification and claims should be understood to mean "one or both" of the elements so combined that such elements appear in combination in some cases and separately in other cases. . In addition to elements specifically identified by "and/or", other elements may optionally be present, whether related or unrelated to those specifically identified elements, unless expressly stated to the contrary.
本申請中引用或參考的所有參考文獻、專利和專利申請和出版物均通過引用整體並入本文。All references, patents and patent applications and publications cited or referenced in this application are hereby incorporated by reference in their entirety.
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