IL144219A0 - Method of electrochemically detecting nucleic acid oligomer hybridization events - Google Patents
Method of electrochemically detecting nucleic acid oligomer hybridization eventsInfo
- Publication number
- IL144219A0 IL144219A0 IL14421900A IL14421900A IL144219A0 IL 144219 A0 IL144219 A0 IL 144219A0 IL 14421900 A IL14421900 A IL 14421900A IL 14421900 A IL14421900 A IL 14421900A IL 144219 A0 IL144219 A0 IL 144219A0
- Authority
- IL
- Israel
- Prior art keywords
- nucleic acid
- hybridisation
- electrochemically detecting
- acid oligomer
- detecting nucleic
- Prior art date
Links
- 238000009396 hybridization Methods 0.000 title abstract 4
- 238000000034 method Methods 0.000 title abstract 2
- 150000007523 nucleic acids Chemical class 0.000 title 1
- 102000039446 nucleic acids Human genes 0.000 title 1
- 108020004707 nucleic acids Proteins 0.000 title 1
- 108091034117 Oligonucleotide Proteins 0.000 abstract 2
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 abstract 1
- 238000004082 amperometric method Methods 0.000 abstract 1
- 238000002848 electrochemical method Methods 0.000 abstract 1
- 239000011159 matrix material Substances 0.000 abstract 1
- 238000005259 measurement Methods 0.000 abstract 1
- 239000000523 sample Substances 0.000 abstract 1
- 238000004832 voltammetry Methods 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6818—Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Engineering & Computer Science (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Immunology (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Saccharide Compounds (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
Abstract
The invention relates to a method for electrochemically detecting sequence-specific nucleic acid-oligomer hybridisation events. DNA/RNA/PNA oligomer single strands which are bound to a conductive surface at one end and linked to a redoxactive unit at the other, free end, serve as a hybridisation matrix (probe). A proportion of the single strand oligonucleotides are hybridised by treatment with the oligonucleotide solution (target) being tested, with the result that the electrical communication between the conductive surface and the redoxactive unit, which is initially non- or barely existent, is increased. This enables a hybridisation event to be detected using electrochemical methods such as voltammetry, amperometry or conductance measurement.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE19901761A DE19901761A1 (en) | 1999-01-18 | 1999-01-18 | Oligonucleotides tagged with photoinducible redox-active unit |
| DE19926457A DE19926457A1 (en) | 1999-01-18 | 1999-04-29 | Method for the electrochemical detection of nucleic acid-oligomer hybridization events |
| PCT/EP2000/000084 WO2000042217A2 (en) | 1999-01-18 | 2000-01-07 | Method for electrochemically detecting nucleic acid-oligomer hybridisation events |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| IL144219A0 true IL144219A0 (en) | 2002-05-23 |
Family
ID=26051373
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| IL14421900A IL144219A0 (en) | 1999-01-18 | 2000-01-17 | Method of electrochemically detecting nucleic acid oligomer hybridization events |
Country Status (18)
| Country | Link |
|---|---|
| EP (1) | EP1144685B1 (en) |
| JP (1) | JP2003521465A (en) |
| CN (1) | CN1352697A (en) |
| AT (1) | ATE238436T1 (en) |
| AU (1) | AU758063B2 (en) |
| BR (1) | BR0007571A (en) |
| CA (1) | CA2371938A1 (en) |
| CZ (1) | CZ20012503A3 (en) |
| DE (1) | DE50001859D1 (en) |
| EA (1) | EA003929B1 (en) |
| ES (1) | ES2198282T3 (en) |
| HU (1) | HUP0105170A3 (en) |
| IL (1) | IL144219A0 (en) |
| MX (1) | MXPA01007183A (en) |
| NO (1) | NO20013471L (en) |
| SI (1) | SI1144685T1 (en) |
| TR (1) | TR200101930T2 (en) |
| WO (1) | WO2000042217A2 (en) |
Families Citing this family (19)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2273270A1 (en) | 1998-08-28 | 2011-01-12 | febit holding GmbH | Method and apparatus for the preparation and/or analysis of biochemical carriers |
| DE10049527A1 (en) * | 2000-10-06 | 2001-09-06 | Friz Biochem Gmbh | A new electrochemical nucleic acid probe comprises an oligonucleotide bound to a thermostable photosynthetic reaction center is useful to detect hybridized nucleic acids |
| DE10051396A1 (en) | 2000-10-17 | 2002-04-18 | Febit Ferrarius Biotech Gmbh | An integrated synthesis and identification of an analyte, comprises particles immobilized at a carrier to be coupled to receptors in a structured pattern to give receptor arrays for biochemical reactions |
| AU2002345746A1 (en) * | 2001-06-21 | 2003-01-08 | The Regents Of The University Of California | Electrochemical detection of mismatch nucleic acids |
| WO2003018834A2 (en) | 2001-08-25 | 2003-03-06 | Friz Biochem Gmbh | Displacement assay for the detection of nucleic acid oligomer hybridization events |
| DE10155054C2 (en) * | 2001-11-09 | 2003-10-23 | Friz Biochem Gmbh | Molecular electronic component for building nanoelectronic circuits, molecular electronic assembly, electronic circuit and manufacturing process |
| US7413859B2 (en) | 2001-11-14 | 2008-08-19 | Siemens Aktiengesellschaft | Method and biosensors for detecting macromolecular biopolymers |
| DE10163836A1 (en) | 2001-12-22 | 2003-07-10 | Friz Biochem Gmbh | Multifunctional reagent for the synthesis of thiol modified oligomers |
| GB0205455D0 (en) | 2002-03-07 | 2002-04-24 | Molecular Sensing Plc | Nucleic acid probes, their synthesis and use |
| US7741033B2 (en) | 2003-05-13 | 2010-06-22 | Trustees Of Boston College | Electrocatalytic nucleic acid hybridization detection |
| ES2335213T3 (en) * | 2003-05-13 | 2010-03-23 | The Trustees Of Boston College | ELECTROCATALITIC DETECTION OF HYBRIDIZATION OF NUCLEIC ACIDS. |
| DE102004004882A1 (en) * | 2004-01-30 | 2005-08-18 | Dade Behring Marburg Gmbh | Test system and method for detection of analytes |
| DE102007044664B4 (en) | 2007-09-18 | 2012-01-05 | Friz Biochem Gesellschaft Für Bioanalytik Mbh | Displacement Assay for the Detection of Nucleic Acid Oligomer Hybridization Events |
| EP2803988B1 (en) | 2008-09-02 | 2017-04-12 | The Governing Council Of The University Of Toronto | Nanostructured microelectrodes and biosensing devices incorporating the same |
| DE102009044795B3 (en) | 2009-12-07 | 2011-04-07 | Friz Biochem Gesellschaft Für Bioanalytik Mbh | Competition assay for the detection of nucleic acid oligomer hybridization events |
| EP2663857B1 (en) | 2011-01-11 | 2018-12-12 | The Governing Council Of The University Of Toronto | Protein detection method |
| WO2012122564A2 (en) | 2011-03-10 | 2012-09-13 | Xagenic, Inc. | Diagnostic and sample preparation devices and methods |
| GB201120118D0 (en) | 2011-11-22 | 2012-01-04 | Iti Scotland Ltd | Detecting analytes |
| DE102011056606B3 (en) | 2011-12-19 | 2013-01-03 | Friz Biochem Gesellschaft Für Bioanalytik Mbh | A method for the electrochemical detection of nucleic acid oligomer hybridization events |
Family Cites Families (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5457183A (en) * | 1989-03-06 | 1995-10-10 | Board Of Regents, The University Of Texas System | Hydroxylated texaphyrins |
| WO1993021530A1 (en) * | 1992-04-10 | 1993-10-28 | Messerschmitt-Bölkow-Blohm Gmbh | PROCESS AND DEVICE FOR INCREASING THE SENSITIVITY AND SELECTIVITY OF IMMUNO-ASSAYS, MOLECULE-RECEPTOR, DNA-COMPLEMENTARY DNA and FOREIGN MOLECULE-HOST MOLECULE INTERACTION ASSAYS |
| US5312527A (en) * | 1992-10-06 | 1994-05-17 | Concordia University | Voltammetric sequence-selective sensor for target polynucleotide sequences |
| US5824473A (en) * | 1993-12-10 | 1998-10-20 | California Institute Of Technology | Nucleic acid mediated electron transfer |
| DE19639169A1 (en) * | 1996-09-24 | 1998-04-02 | Boehringer Mannheim Gmbh | Redox-active compounds and their application |
| EP0939762A2 (en) * | 1996-11-05 | 1999-09-08 | Clinical Micro Sensors | Electrodes linked via conductive oligomers to nucleic acids |
| US6306584B1 (en) * | 1997-01-21 | 2001-10-23 | President And Fellows Of Harvard College | Electronic-property probing of biological molecules at surfaces |
| US6221586B1 (en) * | 1997-04-09 | 2001-04-24 | California Institute Of Technology | Electrochemical sensor using intercalative, redox-active moieties |
| DE19964220C2 (en) * | 1998-11-23 | 2003-07-03 | Friz Biochem Gmbh | Modified nucleic acid oligomer, useful for sequencing by hybridization, is substituted by redox agent to allow electrical detection of hybridization |
-
2000
- 2000-01-07 CN CN00803149.5A patent/CN1352697A/en active Pending
- 2000-01-07 ES ES00904884T patent/ES2198282T3/en not_active Expired - Lifetime
- 2000-01-07 TR TR2001/01930T patent/TR200101930T2/en unknown
- 2000-01-07 SI SI200030137T patent/SI1144685T1/en unknown
- 2000-01-07 CZ CZ20012503A patent/CZ20012503A3/en unknown
- 2000-01-07 EA EA200100672A patent/EA003929B1/en not_active IP Right Cessation
- 2000-01-07 HU HU0105170A patent/HUP0105170A3/en unknown
- 2000-01-07 BR BR0007571-0A patent/BR0007571A/en not_active IP Right Cessation
- 2000-01-07 DE DE50001859T patent/DE50001859D1/en not_active Expired - Fee Related
- 2000-01-07 JP JP2000593774A patent/JP2003521465A/en active Pending
- 2000-01-07 EP EP00904884A patent/EP1144685B1/en not_active Revoked
- 2000-01-07 MX MXPA01007183A patent/MXPA01007183A/en not_active Application Discontinuation
- 2000-01-07 WO PCT/EP2000/000084 patent/WO2000042217A2/en not_active Ceased
- 2000-01-07 CA CA002371938A patent/CA2371938A1/en not_active Abandoned
- 2000-01-07 AT AT00904884T patent/ATE238436T1/en not_active IP Right Cessation
- 2000-01-07 AU AU26627/00A patent/AU758063B2/en not_active Ceased
- 2000-01-17 IL IL14421900A patent/IL144219A0/en unknown
-
2001
- 2001-07-13 NO NO20013471A patent/NO20013471L/en not_active Application Discontinuation
Also Published As
| Publication number | Publication date |
|---|---|
| EP1144685A2 (en) | 2001-10-17 |
| CA2371938A1 (en) | 2000-07-20 |
| SI1144685T1 (en) | 2003-10-31 |
| EA003929B1 (en) | 2003-10-30 |
| WO2000042217A3 (en) | 2000-11-30 |
| BR0007571A (en) | 2001-11-27 |
| TR200101930T2 (en) | 2002-06-21 |
| MXPA01007183A (en) | 2002-05-06 |
| NO20013471D0 (en) | 2001-07-13 |
| EP1144685B1 (en) | 2003-04-23 |
| EA200100672A1 (en) | 2002-02-28 |
| CZ20012503A3 (en) | 2002-01-16 |
| HUP0105170A3 (en) | 2005-03-29 |
| AU2662700A (en) | 2000-08-01 |
| ATE238436T1 (en) | 2003-05-15 |
| DE50001859D1 (en) | 2003-05-28 |
| HUP0105170A2 (en) | 2002-05-29 |
| NO20013471L (en) | 2001-09-13 |
| ES2198282T3 (en) | 2004-02-01 |
| WO2000042217A2 (en) | 2000-07-20 |
| AU758063B2 (en) | 2003-03-13 |
| JP2003521465A (en) | 2003-07-15 |
| CN1352697A (en) | 2002-06-05 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| IL144219A0 (en) | Method of electrochemically detecting nucleic acid oligomer hybridization events | |
| TR200101179T2 (en) | Electrochemical determination method of nucleic acid oligomer hybrids | |
| Paleček et al. | New approaches in the development of DNA sensors: hybridization and electrochemical detection of DNA and RNA at two different surfaces | |
| Lyamichev et al. | A stable complex between homopyrimidine oligomers and the homologous regions of duplex DNAs | |
| Wetmur | DNA probes: applications of the principles of nucleic acid hybridization | |
| PT2217719E (en) | Oligonucleotides and uses thereof | |
| WO2002077272A3 (en) | Methods and nucleic acids for the analysis of hematopoietic cell proliferative disorders | |
| EP1975248A1 (en) | Nucleotide primer set and nucleotide probe for detecting genotype of methylene tetrahydrofolate reductase (MTHFR) | |
| FI3872187T3 (en) | Compositions and methods for improving sample identification in indexed nucleic acid libraries | |
| WO2002000927A8 (en) | Diagnosis of diseases associated with development by means of assessing their methylation status | |
| EP2157191A3 (en) | Method and nucleic acids for the improved treatment of breast cell proliferative disorders | |
| WO2003072821A3 (en) | Method and nucleic acids for the analysis of a colon cell proliferactive disorder | |
| CA2920523A1 (en) | Sensor growth controller | |
| WO2004020662A3 (en) | Method and nucleic acids for the analysis of breast cell proliferative disorders | |
| JP4410269B2 (en) | Nucleic acid primer set, kit for detecting genotype of N-acetyltransferase 2 (NAT2), and detection method using the primer set | |
| ATE272722T1 (en) | METHOD FOR CONTROLLABLY PERFORMING COMPLEX PCR AMPLIFICATIONS | |
| WO2003014388A3 (en) | Method and nucleic acids for the analysis of colon cancer | |
| WO2001021635A3 (en) | Method for electrochemically detecting sequence-specific nucleic acid-oligomer hybridisation events | |
| WO2003044226A3 (en) | Method and nucleic acids for the analysis of a lymphoid cell proliferative disorder | |
| Yamashita et al. | Electrochemical detection of base pair mutation | |
| WO2002029092A3 (en) | Thermostable, photoinducible redoxactive unit for electrochemically detecting nucleic acid-oligomer hybridisation events | |
| Horáková et al. | Detection of Single Nucleotide Polymorphisms in p53 Mutation Hotspots and Expression of Mutant p53 in Human Cell Lines Using an Enzyme‐Linked Electrochemical Assay | |
| García et al. | Electrochemical DNA base pairs quantification and endonuclease cleavage detection | |
| JP4399025B1 (en) | Nucleic acid primer set, kit for detecting genotype of N-acetyltransferase 2 (NAT2), and detection method using the primer set | |
| Takenaka | Pseudo-polyferrocene coating of double stranded DNA with ferrocenylnaphthalene diimide and its application for electrochemical gene detection |