HK40090308A - Anti ccr8 antibody therapy: biomarkers & combination therapies - Google Patents
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技术领域Technical Field
本发明涉及用于产生特异性结合趋化因子受体如CC或CXC趋化因子受体的抗体的工具和方法。提供了分离的硫酸化多肽及其缀合物,其可用作例如抗原或用于脱靶淘选以促进抗人、抗食蟹猴和/或抗小鼠趋化因子受体抗体的产生,例如用于产生具有完全人CDR和/或其他有利特性以用于治疗用途的抗体。This invention relates to tools and methods for generating antibodies that specifically bind to chemokine receptors such as CC or CXC chemokine receptors. Isolated sulfated polypeptides and conjugates thereof are provided, which can be used, for example, as antigens or for off-target panning to promote the generation of antibodies against human, cynomolgus monkey, and/or mouse chemokine receptors, for example, to generate antibodies having fully human CDRs and/or other advantageous properties for therapeutic use.
本发明还涉及可通过应用上述工具和方法获得的抗体及其缀合物。提供了特异性结合人、食蟹猴和/或鼠CCR8并具有有利特性用于治疗用途的抗体,例如交叉反应抗体、全人抗体、低内化(包括非内化)抗体、和在Treg细胞中有效诱导ADCC和/或ADCP的抗体。This invention also relates to antibodies and conjugates thereof that can be obtained by applying the tools and methods described above. Antibodies that specifically bind to human, cynomolgus monkey, and/or mouse CCR8 and have advantageous properties for therapeutic use are provided, such as cross-reactive antibodies, fully human antibodies, low-internalizing (including non-internalizing) antibodies, and antibodies that effectively induce ADCC and/or ADCP in Treg cells.
还提供了本发明抗体或缀合物的医学用途和/或治疗方法,包括将这些抗体单独或组合施用给患者或受试者。最终提供了生物标志物、分层方法和诊断方法来预测或评估对抗CCR8抗体单一疗法或组合疗法的响应。The invention also provides medical uses and/or treatment methods for the antibodies or conjugates of the present invention, including administering these antibodies, alone or in combination, to patients or subjects. Finally, it provides biomarkers, stratification methods, and diagnostic methods for predicting or evaluating responses to monotherapy or combination therapy against CCR8 antibodies.
本发明还提供了用于产生前述抗体的工具和方法、药物组合物、抗体的诊断用途以及带有使用说明书的试剂盒。The present invention also provides tools and methods for generating the aforementioned antibodies, pharmaceutical compositions, diagnostic uses of the antibodies, and kits with instructions for use.
技术问题Technical issues
产生CC和CXC趋化因子受体的抗体Antibodies that produce CC and CXC chemokine receptors
CXC和CC趋化因子受体是特定的七次跨膜G蛋白偶联受体,可介导趋化梯度中的细胞迁移。由于其固有的结构、生物物理和生物学特性,趋化因子受体是抗体生成的具有挑战性的目标类别。难以获得针对趋化因子受体的最佳抗体的原因有多种,这将以示例性方式进行讨论,重点放在人CCR8上。CXC and CC chemokine receptors are specific seven-transmembrane G protein-coupled receptors that mediate cell migration along chemokine gradients. Due to their inherent structural, biophysical, and biological properties, chemokine receptors are a challenging target class for antibody production. Several reasons contribute to the difficulty in obtaining optimal antibodies against chemokine receptors, which will be discussed in an illustrative manner, focusing on human CCR8.
趋化因子受体的特点是嵌入细胞膜中的七个结构域,因此在其天然确认中不易纯化。纯化的天然趋化因子受体将从膜环境中移除,因此可能在构象上受到损害。这些损坏的结构通常不适合抗体生成,因为抗体需要识别呈现在细胞表面的完整抗原。虽然一些趋化因子受体,如CXCR4和CCR5,具有一些固有的稳定性,允许在温和的洗涤剂中纯化,但这不适用于大多数趋化因子受体(Hutchings,Catherine J.,et al.″Opportunities fortherapeutic antibodies directed at G-protein-coupled receptors.″Naturereviews Drug discovery 16.11(2017):787.)。事实强调了这一点,直到今天,蛋白质数据库PDB(rcsb.org)中还没有可用于CCR8的X射线晶体结构。Chemokine receptors are characterized by seven domains embedded in the cell membrane, making them difficult to purify in their native form. Purified native chemokine receptors are removed from their membrane environment and may therefore be conformationally compromised. These damaged structures are generally unsuitable for antibody production, as antibodies require recognition of intact antigens presented on the cell surface. While some chemokine receptors, such as CXCR4 and CCR5, possess some inherent stability that allows purification in mild detergents, this is not the case for most chemokine receptors (Hutchings, Catherine J., et al. "Opportunities for therapeutic antibodies directed at G-protein-coupled receptors." Nature Reviews Drug Discovery 16.11 (2017): 787.). This is underscored by the fact that, to date, no X-ray crystal structure for CCR8 is available in the Protein Database PDB (rcsb.org).
因此,对于趋化因子受体来说,为了获得天然构象中所需数量的蛋白质以及正确的方向和折叠以用作免疫原而进行增溶是很困难的(参见cf.Klarenbeek,Alex,et al.″Targeting chemokines and chemokine receptors with antibodies.″Drug DiscoveryToday:Technologies 9.4(2012):e237-e244.)。Therefore, for chemokine receptors, solubilization is difficult in order to obtain the required amount of protein in the native conformation and the correct orientation and folding for use as an immunogen (see cf. Klarenbeek, Alex, et al. "Targeting chemokines and chemokine receptors with antibodies." Drug Discovery Today: Technologies 9.4 (2012): e237-e244.).
人CCR8整体结构的示意图如图2b所示。在355个氨基酸中,残基1-35(N端)、94-107(ECL1)、172-202(ECL2)和264-280(ECL3)被预测为细胞外结构域(uniprot.org)。假设这些细胞外结构域采用三级结构,由二硫键稳定。因此,平均不到30%的趋化因子受体暴露在细胞表面。因此,趋化因子受体尤其是CCR8不易接近抗体结合,如WO200744756中所述。A schematic diagram of the overall structure of human CCR8 is shown in Figure 2b. Of the 355 amino acids, residues 1-35 (N-terminus), 94-107 (ECL1), 172-202 (ECL2), and 264-280 (ECL3) are predicted to be extracellular domains (uniprot.org). These extracellular domains are assumed to have a tertiary structure, stabilized by disulfide bonds. Therefore, on average, less than 30% of the chemokine receptor is exposed on the cell surface. Consequently, chemokine receptors, especially CCR8, are not readily accessible for antibody binding, as described in WO200744756.
此外,针对对应于趋化因子受体细胞外结构域的肽产生的抗体通常无法识别细胞上的完整受体,这可能是由于二级结构的差异。因此,该领域的研究人员在开发抗体方面的成功率很低(Tschammer,Nuska,ed.Chemokines:chemokines and their receptors indrug discovery.Vol.14.Springer,2015,Chapter by J.E.Pease&R.Horuk,section 6,page 12,2nd para)。Furthermore, antibodies generated against peptides corresponding to the extracellular domains of chemokine receptors often fail to recognize the intact receptors on the cell, likely due to differences in secondary structure. Consequently, researchers in this field have a low success rate in antibody development (Tschammer, Nuska, ed. Chemokines: chemokines and their receptors in drug discovery. Vol. 14. Springer, 2015, Chapter by J.E. Pease & R. Horuk, section 6, page 12, 2nd para).
获得抗鼠CCR8抗体的抗体生成似乎稍微不那么困难,发明人可以复制传统方法,例如Kremer和Márquez描述的方法(D’Ambrosio,Daniele,and FrancescoSinigaglia.Cell Migration in Inflammation and Immunity.Springer,2004.,Chapterby Kremer and Márquez p.243-260)。鼠和人CCR8的序列同一性约为70%,对于细胞外结构域而言甚至更低,如实施例2中更详细的描述。然而,Kremer和Márquez讨论,抗小鼠趋化因子受体单克隆抗体的产生是一项艰巨的挑战,尽管自首次报道其氨基酸序列以来已经过去了一段时间,但针对小鼠趋化因子受体的抗体却相对稀少。Obtaining antibodies against mouse CCR8 appears to be slightly less difficult, and inventors can replicate conventional methods, such as those described by Kremer and Márquez (D’Ambrosio, Daniele, and Francesco Sinigaglia. Cell Migration in Inflammation and Immunity. Springer, 2004., Chapter by Kremer and Márquez, pp. 243-260). The sequence identity between mouse and human CCR8 is approximately 70%, and even lower for the extracellular domains, as described in more detail in Example 2. However, Kremer and Márquez discuss that the generation of monoclonal antibodies against mouse chemokine receptors is a formidable challenge, as antibodies against mouse chemokine receptors are relatively scarce despite the passage of time since their amino acid sequences were first reported.
CCR8的治疗性抗体及其医药用途Therapeutic antibodies against CCR8 and their pharmaceutical applications
尽管它们的产生存在困难,但靶向CC趋化因子受体的抗体已被建议作为各种疾病的有前途的治疗工具,例如基于对涉及免疫细胞的疾病或以趋化因子受体异常表达为特征的各种癌症适应症的机制洞察。Despite the challenges in their production, antibodies targeting the CC chemokine receptor have been suggested as promising therapeutic tools for a variety of diseases, such as those based on mechanistic insights into diseases involving immune cells or various cancer indications characterized by aberrant expression of the chemokine receptor.
2004年,Curiel等可以显示对于104名卵巢癌患者的CD4+CD25+FOXP3+调节性T细胞(Treg细胞或Tregs),人肿瘤Treg细胞抑制肿瘤特异性T细胞免疫并促进体内人类肿瘤的生长(Curiel,Tyler J.,et al.″Specific recruitment of regulatory T cells inovarian carcinoma fosters immune privilege and predicts reduced survival.″Nature medicine 10.9(2004):942-949.)。In 2004, Curiel et al. demonstrated that in 104 ovarian cancer patients, CD4+CD25+FOXP3+ regulatory T cells (Treg cells or Tregs) inhibited tumor-specific T cell immunity and promoted the growth of human tumors in vivo (Curiel, Tyler J., et al. "Specific recruitment of regulatory T cells in ovarian carcinoma fosters immune privilege and predicts reduced survival." Nature medicine 10.9 (2004): 942-949.).
肿瘤细胞和微环境巨噬细胞产生趋化因子,例如CCL22,它介导Treg细胞向肿瘤的运输。肿瘤微环境中高水平的Tregs不仅与许多癌症(如卵巢癌、乳腺癌、肾癌和胰腺癌)的预后不良有关,而且会抑制针对这些癌症的免疫应答,例如通过抑制免疫系统效应细胞的作用。因此,Treg细胞的这种特异性募集代表了肿瘤可以促进免疫特权的一种机制。因此,有人建议阻断Treg细胞迁移或功能以战胜人类癌症。Tumor cells and tumor microenvironment macrophages produce chemokines, such as CCL22, which mediate the transport of Treg cells to the tumor. High levels of Tregs in the tumor microenvironment are not only associated with poor prognosis in many cancers (such as ovarian, breast, kidney, and pancreatic cancer), but also suppress immune responses against these cancers, for example, by inhibiting the role of immune system effector cells. Therefore, this specific recruitment of Treg cells represents a mechanism by which tumors can promote immune privilege. Consequently, it has been proposed to block Treg cell migration or function to combat human cancers.
意识到Curiel的发现后,围绕Plitas/Rudensky和De Simone/Abrignani/Pagani的两个独立团队发现肿瘤浸润性Treg细胞的特征在于CCR8的选择性表达。事实上,对于肿瘤浸润性Treg,Treg细胞耗竭的选择性很重要,因为Treg细胞的全身耗竭可能导致严重的自身免疫(Nishikawa,Hiroyoshi,and Shimon Sakaguchi.″Regulatory T cells intumor immunity.″International j ournal of cancer127.4(2010):759-767)。由于Treg细胞显示出类似于效应淋巴细胞的分子模式,因此寻找特定的Treg标记变得复杂,参见实施例11.2。外周Treg和肿瘤特异性效应细胞在肿瘤内Treg耗竭期间不应遭受友军攻击,因为外周Treg对于避免自身免疫很重要,而肿瘤特异性效应细胞有助于控制肿瘤。Following Curiel's discovery, two independent teams, one led by Plitas/Rudensky and the other by De Simone/Abrignani/Pagani, identified selective CCR8 expression as a characteristic feature of tumor-infiltrating Treg cells. Indeed, the selectivity of Treg cell depletion is important for tumor-infiltrating Tregs, as systemic depletion of Treg cells can lead to severe autoimmunity (Nishikawa, Hiroyoshi, and Shimon Sakaguchi. "Regulatory T cells in tumor immunity." International Journal of Cancer 127.4 (2010): 759-767). Because Treg cells exhibit molecular patterns similar to effector lymphocytes, the search for specific Treg markers becomes complex (see Example 11.2). Peripheral Tregs and tumor-specific effector cells should not be subjected to friendly fire during intratumoral Treg depletion, as peripheral Tregs are important for avoiding autoimmunity, while tumor-specific effector cells help control the tumor.
基于这些发现,多个团队建议使用CCR8抗体选择性耗竭肿瘤浸润性调节性T细胞。虽然一些人提供的数据证实了使用抗人CCR4或抗鼠CCR8抗体在肿瘤模型中减小肿瘤,从而证实了Treg耗竭的机制概念,但仍需要治疗性抗人CCR8抗体,例如在治疗应用中具有卓越的性能。Based on these findings, several teams have suggested using CCR8 antibodies to selectively deplete tumor-infiltrating regulatory T cells. While some data have confirmed the mechanistic concept of Treg depletion by using anti-human CCR4 or anti-mouse CCR8 antibodies to reduce tumors in tumor models, therapeutic anti-human CCR8 antibodies, for example, with superior performance in therapeutic applications, are still needed.
现有技术Existing technology
1.1抗原、方法和抗体1.1 Antigens, Methods, and Antibodies
抗体生成中抗原的选择对于所得抗体的特性至关重要,并且可能造成严重问题,如本文别处所讨论的趋化因子受体如CCR8。在某些情况下,已经使用全细胞作为抗原获得了抗体,这些细胞被工程化用于过度表达趋化因子受体。至少对于某些趋化因子受体而言,这些方法似乎受到产生的结合物数量少的影响。此外,用这些抗原获得的抗体通常具有对趋化因子受体的脱靶结合和低特异性的特征。如果将整个细胞用作抗原,则免疫显性表位可以掩盖其他抗原性较低的表位,而抗原性较低的表位可能会产生所需的选择性和特异性抗体。The choice of antigen in antibody production is crucial to the properties of the resulting antibody and can cause serious problems, such as with chemokine receptors like CCR8, discussed elsewhere in this paper. In some cases, whole cells have been used as antigens to obtain antibodies; these cells are engineered to overexpress chemokine receptors. These methods appear to be limited by the low amount of binding produced, at least for some chemokine receptors. Furthermore, antibodies obtained with these antigens often exhibit off-target binding to chemokine receptors and low specificity. If whole cells are used as antigens, immunodominant epitopes can mask other less antigenic epitopes, which may produce the desired selective and specific antibodies.
对于CCR8,WO2007044756(ICOS)中描述了一种成功的“全细胞”方法。简而言之,抗CCR8单克隆抗体是通过用在细胞表面表达高水平CCR8的用CCR8转染的辐射细胞免疫Balb/c小鼠而开发的。来自这些小鼠的脾细胞通过标准方法融合以产生产生抗体的杂交瘤。阳性库由FACS鉴定,并通过有限稀释进行克隆。其中两种抗体433H和459M在免疫组织化学中显示出对人CCR8的特异性反应性。抗体433H仍然可用,可从BD购买。For CCR8, a successful “whole-cell” approach is described in WO2007044756 (ICOS). In short, anti-CCR8 monoclonal antibodies were developed by immunizing Balb/c mice with CCR8-transfected radiated cells expressing high levels of CCR8 on their cell surface. Spleen cells from these mice were fused using standard methods to generate antibody-producing hybridomas. Positive libraries were identified by FACS and cloned via limiting dilutions. Two of these antibodies, 433H and 459M, showed specific reactivity to human CCR8 in immunohistochemistry. Antibody 433H remains available and can be purchased from BD.
Biolegend分发克隆L263G8,这是一种纯化的小鼠IgG2a抗人CCR8抗体,是使用人CCR8转染子作为免疫原产生的。Biolegend distributed clone L263G8, a purified mouse IgG2a anti-human CCR8 antibody produced using human CCR8 transfectants as an immunogen.
Kremer和Márquez描述了针对鼠CCR8的单克隆抗体的产生(D'Ambrosio,Daniele,and Francesco Sinigaglia.Cell Migration in Inflammation andImmunity.Springer,2004.,Chapter by Kremer and Márquez p.243-260)。简而言之,Kremer和Márquez描述了使用源自鼠CCR8细胞外结构域的肽作为免疫原,但并未暗示酪氨酸的硫酸化。事实上,发明人发现Kremer和Márquez描述的方法可以成功应用于识别鼠CCR8的抗体,但用于识别人CCR8的抗体的成功率很低。Kremer and Márquez described the generation of monoclonal antibodies against mouse CCR8 (D'Ambrosio, Daniele, and Francesco Sinigaglia. Cell Migration in Inflammation and Immunity. Springer, 2004., Chapter by Kremer and Márquez, pp. 243-260). In short, Kremer and Márquez described the use of peptides derived from the extracellular domains of mouse CCR8 as immunogens, but did not imply tyrosine sulfation. Indeed, the inventors found that the method described by Kremer and Márquez could be successfully applied to antibodies recognizing mouse CCR8, but the success rate for antibodies recognizing human CCR8 was very low.
Schaerli等通过用人CCR8肽缀合物(对应于CCR8 N端区域的1-34位与KLH或BSA偶联)免疫兔子产生了抗人CCR8抗体,但同样,不建议酪氨酸硫酸化(Schaerli,Patrick,etal.″A skin-selective homing mechanism for human immune surveillance T cells.″The Journal of experimental medicine 199.9(2004):1265-1275.)。Schaerli et al. generated anti-human CCR8 antibodies by immunizing rabbits with human CCR8 peptide conjugates (corresponding to positions 1-34 of the N-terminal region of CCR8 conjugated with KLH or BSA), but similarly, tyrosine sulfate is not recommended (Schaerli, Patrick, et al. "A skin-selective homing mechanism for human immune surveillance T cells." The Journal of Experimental Medicine 199.9 (2004): 1265-1275.).
Haque等描述了一种与来自CCR8细胞外N端部分的含有26个氨基酸的肽结合的鼠单克隆抗体(Haque,Nasreen S.,et al.″The chemokine receptor CCR8 mediates humanendothelial cell chemotaxis induced by I-309and Kaposi sarcoma herpesvirus-encoded vMIP-I and by lipoprotein(a)-stimulated endothelial cell conditionedmedium.″Blood,The Journal of the American Society of Hematology 97.1(2001):39-45.)。Haque et al. described a mouse monoclonal antibody that binds to a 26-amino acid peptide derived from the extracellular N-terminal portion of CCR8 (Haque, Nasreen S., et al. "The chemokine receptor CCR8 mediates human endothelial cell chemotaxis induced by I-309 and Kaposi sarcoma herpesvirus-encoded vMIP-I and by lipoprotein(a)-stimulated endothelial cell conditioned medium." Blood, The Journal of the American Society of Hematology 97.1 (2001): 39-45.).
这些用于抗体产生的方法均未使用包含趋化因子受体或跨膜蛋白的富含酪氨酸结构域(TRD)的分离的硫酸化多肽作为抗原。使用包含趋化因子受体或跨膜蛋白的TRD的分离的硫酸化多肽作为抗原影响所获得抗体组的结构和功能特征,如本文别处所讨论的。None of these methods for antibody production use isolated sulfated peptides containing tyrosine-rich domains (TRDs) of chemokine receptors or transmembrane proteins as antigens. Using isolated sulfated peptides containing TRDs of chemokine receptors or transmembrane proteins as antigens affects the structural and functional characteristics of the resulting antibody genomes, as discussed elsewhere in this paper.
因此,认为根据本发明的抗体在结构和功能上确实不同于上述现有技术的抗体,例如至少在它们对硫酸化CCR8的亲和力、它们对未硫酸化CCR8的亲和力、它们调节受体信号传导的方式和程度、它们的内化行为、交叉反应性、清除率和药代动力学行为以及最终的Treg耗竭和/或功效方面用于治疗应用。Therefore, the antibodies according to the present invention are indeed different in structure and function from the antibodies of the prior art described above, for example, at least in terms of their affinity for sulfated CCR8, their affinity for unsulfated CCR8, the manner and extent to which they modulate receptor signaling, their internalization behavior, cross-reactivity, clearance rate and pharmacokinetic behavior, and ultimately Treg depletion and/or efficacy for therapeutic applications.
此外,使用本文公开的抗原能够产生完全人抗体。相反,所讨论的针对CCR8的现有技术抗体是非人来源的并且与本发明的一些抗体不同,至少因为它们不包含人类CDR。Furthermore, the antigens disclosed herein can generate fully human antibodies. In contrast, the prior art antibodies against CCR8 discussed are of non-human origin and differ from some of the antibodies of this invention, at least because they do not contain human CDRs.
1.2医学用途和作用方式1.2 Medical Uses and Mechanisms of Action
癌症免疫疗法涉及使用受试者的免疫系统来治疗或预防癌症。免疫疗法通常利用这样一个事实,即癌细胞表面通常具有可以被免疫系统检测到的细微不同的分子,即癌症抗原。因此,免疫疗法涉及激发免疫系统通过这些癌抗原攻击肿瘤细胞。然而,一些癌症,如实体瘤或血液癌症,可以逃避免疫监视。例如,调节性T细胞(Treg细胞或Tregs)的肿瘤浸润,更具体地说,效应T细胞(Teff)与Tregs的低比率已被认为是肿瘤躲避免疫系统的关键因素(Smyth,Mark J.,Shin Foong Ngiow,and Michele WL Teng.″Targeting regulatory T cells in tumor immunotherapy.″Immunology and cell biology 92.6(2014):473-474.)。Cancer immunotherapy involves using a subject's immune system to treat or prevent cancer. Immunotherapy typically leverages the fact that cancer cells often have subtly different molecules on their surface that can be detected by the immune system—cancer antigens. Therefore, immunotherapy involves stimulating the immune system to attack tumor cells through these cancer antigens. However, some cancers, such as solid tumors or blood cancers, can evade immune surveillance. For example, tumor infiltration of regulatory T cells (Treg cells or Tregs), and more specifically, a low ratio of effector T cells (Teff) to Tregs, has been considered a key factor in tumors evading the immune system (Smyth, Mark J., Shin Foong Ngiow, and Michele WL Teng. "Targeting regulatory T cells in tumor immunotherapy." Immunology and Cell Biology 92.6 (2014): 473-474.).
众所周知,表达Foxp3的调节性T细胞是预防自身免疫不可或缺的,可有效抑制肿瘤免疫。Treg细胞大量浸润到肿瘤组织中,这通常与癌症患者的不良预后有关。去除Treg细胞可增强抗肿瘤免疫应答,但也可能引发自身免疫。定制靶向Treg的癌症免疫疗法的一个关键问题在于特异性耗竭浸润到肿瘤组织中的Treg细胞而不影响肿瘤反应性效应T细胞,同时抑制自身免疫。It is well known that regulatory T cells expressing Foxp3 are indispensable for preventing autoimmunity and can effectively suppress tumor immunity. The massive infiltration of Treg cells into tumor tissue is often associated with poor prognosis in cancer patients. Depletion of Treg cells can enhance anti-tumor immune responses but may also trigger autoimmunity. A key challenge in tailored cancer immunotherapies targeting Tregs is specifically depleting Treg cells infiltrating tumor tissue without affecting tumor-responsive effector T cells, while simultaneously suppressing autoimmunity.
早在2010年,各种团队就已经研究对Treg耗竭例如通过用抗CD25抗体耗竭可以提高小鼠的抗肿瘤免疫力。已经表明,在接种肿瘤细胞之前耗竭Treg会导致它们的有效排斥,而在肿瘤接种同时或之后发生的Treg耗竭不会导致肿瘤消退。也有人认为,这是由于施用的耗竭抗体也去除了表达CD25的效应T细胞,而CD25-Foxp3+Tregs持续存在(Klages,Katjana,et al.″Selective depletion of Foxp3+regulatory T cells improveseffective therapeutic vaccination against established melanoma.″Cancerresearch 70.20(2010):7788-7799.)。As early as 2010, various teams had already studied how Treg depletion, for example by using anti-CD25 antibodies, could enhance anti-tumor immunity in mice. It has been shown that depleting Tregs before inoculation with tumor cells leads to their effective rejection, while Treg depletion occurring simultaneously with or after tumor inoculation does not lead to tumor regression. It is also believed that this is because the applied depletion antibody also removes effector T cells expressing CD25, while CD25-Foxp3+ Tregs persist (Klages, Katjana, et al. "Selective depletion of Foxp3+regulatory T cells improves effective therapeutic vaccination against established melanoma." Cancer Research 70.20 (2010): 7788-7799.).
2015年,无岩藻糖基化人源化抗人CCR4单克隆抗体mogamulizumab(KW-0761)在一项针对CCR4阳性癌症患者的临床研究中进行了评估(Kurose,Koji,et al.″Phase Iastudy of FoxP3+CD4 Treg depletion by infusion of a humanized anti-CCR4antibody,KW-0761,in cancer patients.″Clinical Cancer Research 21.19(2015):4327-4336.)。CCR4在调节性T细胞上表达。事实上,mogamulizumab有效地耗尽了Treg细胞,并观察到对癌症抗原的特异性免疫反应的增强或诱导。然而,mogamulizumab靶向外周和肿瘤内Treg以及其他效应细胞群,从而导致免疫学副作用,例如皮疹或史蒂文斯约翰逊综合征。In 2015, the fucosylated humanized anti-human CCR4 monoclonal antibody mogamulizumab (KW-0761) was evaluated in a clinical study in CCR4-positive cancer patients (Kurose, Koji, et al. "Phase I study of FoxP3+CD4 Treg depletion by infusion of a humanized anti-CCR4 antibody, KW-0761, in cancer patients." Clinical Cancer Research 21.19(2015):4327-4336.). CCR4 is expressed on regulatory T cells. Indeed, mogamulizumab effectively depletes Treg cells and an enhancement or induction of specific immune responses to cancer antigens was observed. However, mogamulizumab targets peripheral and intratumoral Tregs, as well as other effector cell populations, leading to immunological side effects such as rash or Stevens-Johnson syndrome.
因此,虽然Treg耗竭在癌症治疗中的巨大潜力是显而易见的,但缺少选择性靶向Treg和避免明显自身免疫的概念。2015年和2016年,Plitas/Rudensky和De Simone/Abrignani/Pagani这两个团队的工作改变了这一点。Therefore, while the enormous potential of Treg depletion in cancer treatment is evident, the concept of selectively targeting Tregs and avoiding obvious autoimmunity is lacking. This changed with the work of the teams of Plitas/Rudensky and De Simone/Abrignani/Pagani in 2015 and 2016.
Plitas等证明CCR8由人乳腺癌浸润性Treg细胞选择性表达,并立即得出结论,靶向CCR8代表了一种有前途的免疫治疗方法,用于治疗患有乳腺癌和其他肿瘤的患者(Plitas,G.,et al.″Abstract P4-04-11:Preferential expression of the chemokinereceptor 8(CCR8)on regulatory T cells(Treg)infiltrating human breast cancersrepresents a novel immunotherapeutic target.″(2016):P4-04.;Plitas,George,etal.″Regulatory T cells exhibit distinct features in human breast cancer.″Immunity 45.5(2016):1122-1134.;US10087259)。Plitas et al. demonstrated that CCR8 is selectively expressed by human breast cancer invasive Treg cells and immediately concluded that targeting CCR8 represents a promising immunotherapy for treating patients with breast cancer and other tumors (Plitas, G., et al. "Abstract P4-04-11: Preferential expression of the chemokine receptor 8 (CCR8) on regulatory T cells (Treg) infiltrating human breast cancers represents a novel immunotherapeutic target." (2016): P4-04.; Plitas, George, et al. "Regulatory T cells exhibit distinct features in human breast cancer." Immunity 45.5 (2016): 1122-1134.; US10087259).
在Plitas等的初步工作发表后不久,De Simone等发表了关于肿瘤浸润性调节性T细胞的转录图景的分析,发现肿瘤浸润性Treg细胞具有高度免疫抑制作用,并在其细胞表面表达CCR8作为特定的特征分子(De Simone,Marco,et al.″Transcriptional landscapeof human tissue lymphocytes unveils uniqueness of tumor-infiltrating Tregulatory cells.″Immunity 45.5(2016):1135-1147.,WO2017198631)。作者描述了CCR8与不良预后相关,并得出结论认为CCR8可能是一个有趣的治疗靶点,可以抑制Treg细胞运输到肿瘤部位,同时不会干扰不表达CCR8的其他效应T细胞的募集。Shortly after the initial work by Plitas et al., De Simone et al. published an analysis of the transcriptional landscape of tumor-infiltrating regulatory T cells, finding that tumor-infiltrating Treg cells have a high immunosuppressive effect and express CCR8 on their cell surface as a specific characteristic molecule (De Simone, Marco, et al. "Transcriptional landscape of human tissue lymphocytes unveils uniqueness of tumor-infiltrating Tregulatory cells." Immunity 45.5 (2016): 1135-1147., WO2017198631). The authors described the association of CCR8 with poor prognosis and concluded that CCR8 may be an interesting therapeutic target that could inhibit Treg cell transport to the tumor site without interfering with the recruitment of other effector T cells that do not express CCR8.
WO2018112032和WO2018112033描述了降低肿瘤中肿瘤浸润性调节性T细胞(TITR)的数量或活性的方法,包括施用在表达基因产物例如CCR8的细胞中诱导细胞毒性的试剂。WO2018112032 and WO2018112033 describe methods for reducing the number or activity of tumor-infiltrating regulatory T cells (TITR) in tumors, including the administration of agents that induce cytotoxicity in cells expressing gene products such as CCR8.
WO2018112033和EP3431105描述了一种可以调节至少一种标志物(在肿瘤浸润调节性T细胞中选择性失调)的表达和/或功能的分子用于预防和/或治疗该肿瘤。WO2018112033 and EP3431105 describe a molecule that can regulate the expression and/or function of at least one marker (selectively dysregulated in tumor-infiltrating regulatory T cells) for the prevention and/or treatment of the tumor.
WO2018181425涉及具有ADCC活性的针对CCR8的抗体,用于治疗癌症的方法,其中针对CCR8的抗体是CCR8中和抗体。WO2018181425没有公开具体的抗体序列,而是指由BioLegend在目录号150302下分发的大鼠抗小鼠CCR8克隆SA214G2。该抗体用作工具抗体,以概括先前描述的小鼠Treg耗竭的抗肿瘤发生作用。WO2018181425 relates to an antibody against CCR8 with ADCC activity for a method of treating cancer, wherein the antibody against CCR8 is a CCR8 neutralizing antibody. WO2018181425 does not disclose a specific antibody sequence, but rather refers to the rat anti-mouse CCR8 clone SA214G2 distributed by BioLegend under catalog number 150302. This antibody is used as a tool antibody to generalize the previously described antitumor activity of mouse Treg depletion.
根据本发明,提供了一种促进抗CCR8抗体的产生并产生具有用于治疗用途的优异特性的抗体的方法。将根据本发明的抗体与现有技术的抗体进行比较,发现在结构、功能和治疗功效上存在差异,如本文别处所讨论的。According to the present invention, a method is provided to promote the production of anti-CCR8 antibodies and generate antibodies with excellent properties for therapeutic use. Comparison of the antibodies according to the present invention with prior art antibodies reveals differences in structure, function, and therapeutic efficacy, as discussed elsewhere herein.
问题的解决方案Solution to the problem
1.1 CC和CXC趋化因子受体的抗体的生成1.1 Antibody generation of CC and CXC chemokine receptors
由于现有技术方法产生CC趋化因子受体的抗体的成功率低,并且所得抗体通常表现不佳(参见例如实施例3),发明人开发了一种新方法来产生趋化因子受体的抗体,并且特别地,产生抗CCR8抗体。Because existing methods for generating antibodies against the CC chemokine receptor have low success rates and the resulting antibodies typically perform poorly (see, for example, Example 3), the inventors have developed a new method for generating antibodies against the chemokine receptor, and specifically, for generating anti-CCR8 antibodies.
使用经过特殊修饰的分离多肽作为抗原来选择人抗人CCR8抗体解决了提供针对CC和CXC趋化因子受体的抗体生成的改进方法的问题,例如可以首次获得完整的人抗CCR8抗体,参见实施例6。更详细地,通过在特定位置引入硫酸盐修饰来修饰包含人CCR8的富含酪氨酸结构域(任选地包括LID结构域)的多肽以形成抗原,参见实施例4,表4.1。噬菌体展示方法任选地与这种特别修饰的抗原一起使用以选择完全人抗人CCR8抗体。或者,硫酸化抗原可用于各种其他方法,例如在常规免疫方法中。Using specially modified isolated peptides as antigens to select human anti-human CCR8 antibodies solves the problem of providing improved methods for antibody generation against CC and CXC chemokine receptors, for example, allowing for the first-ever complete human anti-CCR8 antibody, see Example 6. More specifically, the antigen is formed by modifying peptides containing human CCR8 tyrosine-rich domains (optionally including LID domains) by introducing sulfate modification at specific sites, see Example 4, Table 4.1. Phage display methods are optionally used in conjunction with this specially modified antigen to select complete human anti-human CCR8 antibodies. Alternatively, sulfated antigens can be used in a variety of other methods, such as in conventional immunization methods.
获得的抗体对硫酸化抗原和在生理条件下表达的生物靶标显示出极好的结合特征,参见实施例6、10.1.1,但对未修饰抗原的亲和力相对较低或没有亲和力,参见实施例10.1.2、实施例10.1.3,表明硫酸化残基确实对抗原抗体结合至关重要。本发明的抗体还显示出对经工程化以表达人、食蟹猴或鼠CCR8的细胞系以及激活的人Tregs的极好且特异的结合,参见实施例10.1.1。The obtained antibodies exhibited excellent binding characteristics to sulfated antigens and biological targets expressed under physiological conditions (see Examples 6 and 10.1.1), but showed relatively low or no affinity for unmodified antigens (see Examples 10.1.2 and 10.1.3), indicating that sulfated residues are indeed crucial for antigen-antibody binding. The antibodies of this invention also showed excellent and specific binding to cell lines engineered to express human, cynomolgus monkey, or mouse CCR8, as well as activated human Tregs (see Example 10.1.1).
在抗体的六个CDR环中,H3环显示出最大的结构多样性并且位于结合位点的中心。它还通过亲和力成熟获得最多的突变,平均与抗原的接触次数最多。因此,它在抗原结合中起着至关重要的作用。分析根据本发明的方法获得的抗体的具体结构,令人惊奇地发现,HCDR3的组成在结构上不同于通常的人HCDR3结构域,参见实施例9。特别地,具有治疗上最有益特性和与CCR8特异性结合的抗体的HCDR3结构域的特征在于平均频率为~21%的酪氨酸残基和平均含量为~10%的组氨酸,强调了这些残基对特异性硫酸化抗原识别的有益影响(参见表9.2)。Of the six CDR rings of the antibody, the H3 ring exhibits the greatest structural diversity and is located at the center of the binding site. It also acquires the most mutations through affinity maturation and has the highest average number of contacts with the antigen. Therefore, it plays a crucial role in antigen binding. Analysis of the specific structure of the antibody obtained according to the method of the present invention surprisingly revealed that the composition of HCDR3 differs structurally from the typical human HCDR3 domain (see Example 9). In particular, the HCDR3 domain of the antibody possessing the most therapeutically beneficial properties and specific binding to CCR8 is characterized by an average frequency of ~21% tyrosine residues and an average content of ~10% histidine residues, highlighting the beneficial effect of these residues on the recognition of specific sulfated antigens (see Table 9.2).
不受理论的束缚,发明人认为这些结构特征转化为某些功能特征,这使得获得的抗体更适合于治疗应用。例如,与测试的现有技术抗体相比,根据本发明的几种抗体阻断G蛋白依赖性信号传导,参见实施例10.4.3,但不影响G蛋白非依赖性途径,参见实施例10.4、10.4.1、10.4.2,并且基本上不内化到具有靶趋化因子受体内源性表达的细胞中,参见实施例10.5。此外,根据本发明的特别优选的抗体对靶受体和靶细胞具有特异性,参见实施例10.2、11,并且在癌症治疗方法中特别适用/显示出优异的特性,参见实施例12ff。此外,使用这些合成多肽作为抗原或用于脱靶淘选促进或能够产生交叉反应抗体,例如特异性结合人CCR8和/或食蟹猴CCR8的抗体,参见实施例10.1.1。Unbound by theory, the inventors believe that these structural features translate into certain functional features, making the resulting antibodies more suitable for therapeutic applications. For example, compared to tested prior art antibodies, several antibodies according to the invention block G protein-dependent signaling (see Example 10.4.3) without affecting G protein-independent pathways (see Examples 10.4, 10.4.1, 10.4.2) and are substantially not internalized into cells with endogenous expression of target chemokine receptors (see Example 10.5). Furthermore, particularly preferred antibodies according to the invention are specific to target receptors and target cells (see Examples 10.2, 10.11) and are particularly suitable/exhibit superior properties in cancer treatment methods (see Example 12ff). Additionally, the use of these synthetic polypeptides as antigens or for off-target panning to promote or generate cross-reactive antibodies, such as antibodies specifically binding to human CCR8 and/or cynomolgus monkey CCR8 (see Example 10.1.1).
1.2提供特异性结合趋化因子受体的治疗性抗体1.2 Provide therapeutic antibodies that specifically bind to chemokine receptors
1.2.1获得具有人CDR的趋化因子受体抗体1.2.1 Obtaining chemokine receptor antibodies with human CDR
虽然用鼠CDR对抗体进行人源化可能会提高抗体的免疫原性,但残留的免疫原性存在于CDR区域(Harding,Fiona A.,et al.″The immunogenicity of humanized andfully human antibodies:residual immunogenicity resides in the CDR regions.″MAbs.Vol.2.No.3.Taylor&Francis,2010)。因此,与包含来自其他物种的CDR的抗体相比,包含人CDR的抗体被认为更适合作为人类治疗剂。While humanizing antibodies with mouse CDRs may enhance their immunogenicity, residual immunogenicity remains in the CDR regions (Harding, Fiona A., et al. "The immunogenicity of humanized and fully human antibodies: residual immunogenicity resides in the CDR regions." MAbs. Vol. 2. No. 3. Taylor & Francis, 2010). Therefore, antibodies containing human CDRs are considered more suitable as human therapeutic agents compared to antibodies containing CDRs from other species.
例如,可以通过噬菌体展示技术或使用能够产生完全人抗体的转基因动物来生产具有人CDR的抗体。然而,获得完全人抗体并不总是微不足道的。虽然理论上HCDR3区域的多样性几乎是无限的,但在实践中,抗体库多样性的产生似乎受到多种机制的仔细调节,这些机制产生的体内库在其多样性和抗原结合位点的范围内受到限制。人类噬菌体展示文库也是如此,它们通常旨在反映体内库。因此,在某些情况下,啮齿动物CDR可以满足“复杂”抗原的结构要求,而人CDR无法轻易识别相同的结构。根据观察到酪氨酸在人HCDR3中的表现比在鼠HCDR3中平均低约50%,可以假设在需要酪氨酸和组氨酸的独特结合能力才能实现靶标结合的情况下,寻找人抗人抗体显然更具挑战性。事实上,本发明人不知道完全人抗人CCR8现有技术抗体。根据本发明,提供了包含人源CDR的CCR8抗体,以及完全人抗体,参见实施例6、7、8。For example, antibodies with human CDRs can be produced using phage display technology or by using transgenic animals capable of producing fully human antibodies. However, obtaining fully human antibodies is not always trivial. While the diversity of the HCDR3 region is theoretically almost limitless, in practice, the generation of antibody library diversity appears to be carefully regulated by a number of mechanisms that limit the diversity and antigen-binding sites of in vivo libraries. The same is true for human phage display libraries, which are typically designed to reflect in vivo libraries. Thus, in some cases, rodent CDRs can meet the structural requirements of “complex” antigens that human CDRs cannot easily recognize. Based on the observation that tyrosine is on average about 50% less active in human HCDR3 than in mouse HCDR3, it can be assumed that finding human anti-human antibodies is clearly more challenging in cases where unique binding capabilities of tyrosine and histidine are required for target binding. In fact, the inventors are unaware of any prior art fully human anti-human CCR8 antibodies. According to the present invention, CCR8 antibodies comprising human CDRs are provided, as well as fully human antibodies, see Examples 6, 7, and 8.
1.2.2获得交叉反应性趋化因子受体抗体1.2.2 Obtaining cross-reactive chemokine receptor antibodies
交叉反应性抗趋化因子受体抗体如交叉反应性抗CCR8抗体有利于治疗性抗体的开发,因为它们可用于非人类动物模型,以在药理学数据和安全性方面表征治疗剂,然后将抗体施用于人类。然而,交叉反应抗体,例如在两个物种中具有相似结合行为的很难产生并且不容易亲和力成熟,例如因为CCR8等趋化因子受体的细胞外部分在物种之间具有低同源性(参见实施例2)。根据本发明,针对CCR8的交叉反应抗体尤其可以通过使用包含在物种之间具有更高保守性的基序的小硫酸化酪氨酸来产生,使得结合来自两个或更多物种的趋化因子受体如CCR8的交叉反应抗体例如可以通过简单方便的方式获得具有相同数量级的亲和力,参见实施例6、7、10.1.1。Cross-reactive anti-chemokine receptor antibodies, such as cross-reactive anti-CCR8 antibodies, are advantageous for the development of therapeutic antibodies because they can be used in non-human animal models to characterize therapeutics in terms of pharmacological data and safety before administration to humans. However, cross-reactive antibodies, such as those with similar binding behavior in two species, are difficult to generate and do not readily mature for affinity, for example because the extracellular portions of chemokine receptors such as CCR8 have low homology across species (see Example 2). According to the invention, cross-reactive antibodies against CCR8 can be generated, in particular, by using small sulfated tyrosine residues containing motifs that are more conserved across species, such that cross-reactive antibodies binding to chemokine receptors such as CCR8 from two or more species can be obtained, for example, in a simple and convenient manner with the same order of magnitude of affinity (see Examples 6, 7, 10.1.1).
1.2.3获得用于治疗的趋化因子受体抗体1.2.3 Obtaining chemokine receptor antibodies for therapeutic use
为了诱导杀死表达靶标趋化因子受体或CCR8的细胞,可以设想多种作用模式。一种作用模式是将靶向趋化因子受体或CCR8的抗体与药物缀合为抗体药物缀合物(ADC)的形式。其他可能的作用模式是诱导抗体依赖性细胞毒性(ADCC)、抗体依赖性细胞吞噬作用(ADCP)和/或补体依赖性细胞毒性(CDC)。对于ADCC、CDC和ADCP,涉及两步机制:一方面,需要抗体或片段有效结合靶细胞,例如通过CCR8的Treg,另一方面,抗体的FC部分(或可以与抗体或片段缀合的替代结合部分,如本文别处所述)必须结合效应细胞,然后介导靶标细胞的杀伤。对于ADCP,作为效应细胞与巨噬细胞的结合通常通过抗体FC部分与巨噬细胞表达的FcγRIIa(CD32a)的相互作用发生。相反,ADCC是通过抗体或片段与FcγRIIIa的相互作用介导的。在人类中,FcγRIII以两种不同的形式存在:FcγRIIIa(CD16a)和FcγRIIIb(CD16b)。FcγRIIIa作为跨膜受体在肥大细胞、巨噬细胞和自然杀伤细胞上表达,而FcγRIIIb仅在中性粒细胞上表达。这些受体与IgG抗体的Fc部分结合,然后激活由人类效应细胞介导的抗体依赖性细胞介导的细胞毒性(ADCC)。To induce the killing of cells expressing target chemokine receptors or CCR8, several modes of action can be envisioned. One mode of action involves conjugating an antibody targeting the chemokine receptor or CCR8 with a drug to form an antibody-drug conjugate (ADC). Other possible modes of action include inducing antibody-dependent cytotoxicity (ADCC), antibody-dependent phagocytosis (ADCP), and/or complement-dependent cytotoxicity (CDC). For ADCC, CDC, and ADCP, a two-step mechanism is involved: on the one hand, the antibody or fragment needs to effectively bind to the target cell, for example, via the Tregs of CCR8; on the other hand, the FC portion of the antibody (or an alternative binding portion that can be conjugated with the antibody or fragment, as described elsewhere in this document) must bind to the effector cell, thus mediating the killing of the target cell. For ADCP, the binding of effector cells to macrophages typically occurs through the interaction of the antibody's FC portion with FcγRIIa (CD32a) expressed by macrophages. Conversely, ADCC is mediated through the interaction of the antibody or fragment with FcγRIIIa. In humans, FcγRIII exists in two distinct forms: FcγRIIIa (CD16a) and FcγRIIIb (CD16b). FcγRIIIa is expressed as a transmembrane receptor on mast cells, macrophages, and natural killer cells, while FcγRIIIb is expressed only on neutrophils. These receptors bind to the Fc moiety of IgG antibodies, thereby activating antibody-dependent cell-mediated cytotoxicity (ADCC) mediated by human effector cells.
1.2.4获得低内化(包括非内化)趋化因子受体抗体1.2.4 Obtaining low-internalized (including non-internalized) chemokine receptor antibodies
当发明人分析已知的抗人CCR8现有技术抗体时,他们发现这些抗体很容易内化到具有内源靶标表达的细胞中,但不会长时间驻留在细胞表面。抗体的内化行为不仅会影响其清除和药理学行为,还会影响其对治疗用途的特定作用模式的适用性。When the inventors analyzed known prior art anti-human CCR8 antibodies, they found that these antibodies readily internalized into cells expressing endogenous targets but did not remain on the cell surface for extended periods. The internalization behavior of antibodies not only affects their clearance and pharmacological behavior but also their suitability for specific modes of action for therapeutic purposes.
虽然高内化对于某些抗体药物缀合物的产生是可取的,但对于ADCC诱导的肿瘤细胞或Treg细胞的耗竭是不可取的。更详细地说,需要抗体药物缀合物将药物转运到细胞中,以实现对靶细胞的有效和特异性耗竭。相反,ADCC作用模式需要抗体及其Fc结构域暴露在靶细胞外部,免疫效应细胞可以在此处结合FC结构域以裂解靶细胞。因此,低或甚至没有内化率会增加ADCC/ADCP诱导抗体的作用时间。While high internalization is desirable for the formation of certain antibody-drug conjugates, it is undesirable for ADCC-induced depletion of tumor cells or Treg cells. More specifically, antibody-drug conjugates are required to deliver the drug into the cells to achieve effective and specific depletion of the target cells. Conversely, the ADCC mode of action requires the antibody and its Fc domain to be exposed externally to the target cell, where immune effector cells can bind the Fc domain to lyse the target cell. Therefore, low or even no internalization increases the duration of action of ADCC/ADCP-induced antibodies.
在对用新方法获得的抗体进行表征后,发明人惊奇地发现,根据本发明的几种抗体在具有内源性CCR8表达水平的细胞中表现出特别低或甚至不存在内化特征,参见实施例10.5,而识别相同靶标的现有技术抗体具有更高的内化率。例如,现有技术的抗体433H和L263G8很容易内化到靶细胞中,并且不会长时间驻留在细胞表面。由于它们的低内化特性,因此根据本发明的一些抗体特别适用于ADCC、ADCP、CDC或混合方法,例如组合的ADCC/ADCP方法。Upon characterizing the antibodies obtained using the novel method, the inventors were surprised to find that several antibodies according to the invention exhibited particularly low or even nonexistent internalization characteristics in cells with endogenous CCR8 expression levels (see Example 10.5), while prior art antibodies recognizing the same target showed higher internalization rates. For example, prior art antibodies 433H and L263G8 readily internalize into target cells and do not remain on the cell surface for extended periods. Due to their low internalization properties, some antibodies according to the invention are particularly suitable for ADCC, ADCP, CDC, or mixed methods, such as combined ADCC/ADCP methods.
通常,靶标的选择是强烈影响抗体内化进入细胞的重要因素。根据Islam SA等的说法,CCL1配体结合会诱导CCR8的Ca2+通量(flux)和快速受体内化(Islam,Sabina A.,etal.″Identification of human CCR8 as a CCL18 receptorCCR8 is a CCL18receptor.″The Journal of experimental medicine 210.10(2013):1889-1898.)。发明人惊奇地发现抗体本身能够如此大程度地影响内化特性。然而,当他们表征本发明的抗体调节其靶趋化因子受体的G蛋白非依赖性信号通路的能力时,他们发现所有测试的现有技术抗体不仅阻断G蛋白依赖性信号,而且还调节G蛋白非依赖性信号,参见实施例10.4 ff。G蛋白非依赖性信号先前已与内化行为相关联,参见Fox,James M.,et al.″Structure/function relationships of CCR8 agonists and antagonists:Amino-terminalextension of CCL 1by a single amino acid generates a partial agonist.″Journalof Biological Chemistry 281.48(2006):36652-36661。Typically, target selection is a crucial factor strongly influencing antibody internalization into cells. According to Islam SA et al., CCL1 ligand binding induces Ca2+ flux and rapid receptor internalization of CCR8 (Islam, Sabina A., et al. "Identification of human CCR8 as a CCL18 receptor. CCR8 is a CCL18 receptor." The Journal of Experimental Medicine 210.10 (2013): 1889-1898.). The inventors were surprised to find that antibodies themselves could influence internalization properties to such a great extent. However, when they characterized the ability of the antibodies of this invention to modulate the G protein-independent signaling pathway of their target chemokine receptors, they found that all prior art antibodies tested not only blocked G protein-dependent signaling but also modulated G protein-independent signaling, see Example 10.4 ff. G protein-independent signaling has previously been associated with internalization behavior; see Fox, James M., et al. "Structure/function relationships of CCR8 agonists and antagonists: Amino-terminal extension of CCL1 by a single amino acid generates a partial agonist." Journal of Biological Chemistry 281.48 (2006): 36652-36661.
1.2.5获得调节靶受体信号的趋化因子受体抗体1.2.5 Obtaining chemokine receptor antibodies that regulate target receptor signaling
抗体调节趋化因子受体的方式有多种。例如,抗体可以Antibodies regulate chemokine receptors in several ways. For example, antibodies can...
a)阻断G蛋白非依赖性信号,a) Block G protein-independent signaling.
b)阻断G蛋白依赖性信号,b) Block G protein-dependent signaling,
c)阻断G蛋白依赖性和G蛋白非依赖性信号传导,c) Block both G protein-dependent and G protein-independent signal transduction.
d)增加G蛋白非依赖性信号,d) Increase G protein-independent signaling,
e)增加G蛋白依赖性信号,e) Increase G protein-dependent signaling,
f)增加G蛋白依赖性和G蛋白非依赖性信号传导。f) Increase both G protein-dependent and G protein-independent signaling.
不受理论的束缚,发明人假设相应趋化因子受体的硫酸化TRD可能与配体诱导的趋化因子受体信号传导相关。有趣的是,大多数本发明的抗体有效地阻断了配体诱导的G蛋白依赖性信号但不影响G蛋白非依赖性信号,参见实施例10.4ff。相反,所有现有技术抗体同样阻断配体诱导的G蛋白依赖性信号传导但激动G蛋白非依赖性信号传导。不受理论的束缚,这些差异可能导致内化行为的差异。Unbound by theory, the inventors hypothesize that the sulfated TRD of the corresponding chemokine receptor may be associated with ligand-induced chemokine receptor signaling. Interestingly, most of the antibodies of this invention effectively block ligand-induced G protein-dependent signaling but do not affect G protein-independent signaling, see Example 10.4ff. Conversely, all prior art antibodies similarly block ligand-induced G protein-dependent signaling but activate G protein-independent signaling. Unbound by theory, these differences may lead to differences in internalization behavior.
避免治疗性抗体诱导G蛋白非依赖性信号传导也可能是有利的,因为非特异性信号传导可能导致无法控制的下游效应,例如细胞增殖增加,参见Hutchings,Catherine J.,et al.(2017);Webb,David R.,et al.″Opportunities for functional selectivity inGPCR antibodies.″Biochemical pharmacology 85.2(2013):147-152.;Fox,James M.,etal.(2006)。Avoiding therapeutic antibody-induced G protein-independent signaling may also be advantageous, as nonspecific signaling can lead to uncontrollable downstream effects, such as increased cell proliferation; see Hutchings, Catherine J., et al. (2017); Webb, David R., et al. "Opportunities for functional selectivity in GPCR antibodies." Biochemical pharmacology 85.2 (2013): 147-152.; Fox, James M., et al. (2006).
1.2.6获得ADCC/ADCP诱导趋化因子受体抗体1.2.6 Obtaining ADCC/ADCP-induced chemokine receptor antibodies
根据本发明的抗体的特征在于对ADCC和ADCP的优异诱导,如例如在实施例10.3.3、10.3.4中所示。在一些优选的实施方式中,通过消除N297处的岩藻糖(无岩藻糖基化)来工程化抗体以获得高ADCC率,参见实施例10.3.1。有趣的是,许多本发明的抗CCR8抗体似乎通过使用两种机制(即ADCC和ADCP)的联合作用模式诱导靶细胞耗竭。The antibodies according to the invention are characterized by excellent induction of ADCC and ADCP, as shown, for example, in Examples 10.3.3 and 10.3.4. In some preferred embodiments, the antibody is engineered to obtain a high ADCC rate by eliminating fucose at N297 (fucosylation-free), see Example 10.3.1. Interestingly, many of the anti-CCR8 antibodies of the present invention appear to induce target cell exhaustion through a combined mode of action of both mechanisms (i.e., ADCC and ADCP).
1.3治疗方法1.3 Treatment Methods
虽然几个研究小组已经建议基于机制见解在治疗方法中使用结合CCR8的抗体,但提供具有最佳治疗特性的抗体的方法一直很缺乏。通过提供根据本发明的抗体产生方法,现在可以容易地获得具有优异治疗特性的趋化因子受体抗体。根据本发明,公开了具有有利特性的各种序列定义的抗体,其可用于治疗方法,例如在基于ADCC的方法中,在基于ADCP的方法中,在基于CDC的方法中,或在混合的基于ADCC/ADCP的方法中,作为缀合物的一部分。实施例12ff显示用根据本发明的方法产生的替代抗体在Treg耗竭、总体反应率和肿瘤与对照比率方面显示出显著的功效。While several research groups have suggested the use of CCR8-binding antibodies in therapeutics based on mechanistic insights, methods for providing antibodies with optimal therapeutic properties have been lacking. By providing an antibody production method according to the invention, chemokine receptor antibodies with excellent therapeutic properties can now be readily obtained. According to the invention, antibodies with various sequence definitions possessing advantageous properties are disclosed that can be used in therapeutic methods, for example, in ADCC-based methods, ADCP-based methods, CDC-based methods, or in mixed ADCC/ADCP-based methods, as part of a conjugate. Example 12ff shows that the alternative antibody produced using the method according to the invention exhibits significant efficacy in terms of Treg depletion, overall response rate, and tumor-to-control ratio.
1.4联合治疗1.4 Combined Treatment
虽然在使用本发明的抗CCR8抗体的单一疗法中获得了显著的反应率,但令人惊讶地发现,通过将抗体与免疫检查点抑制剂、进一步的靶向疗法、甚至非特异性化学疗法或放射疗法相结合,可以进一步提高治疗益处。这些联合治疗在具有挑战性的肿瘤模型中特别有益。特别地,发现特定的联合治疗方案是有效的,其中仅在抗-CCR8抗体引起大量Treg耗竭后施用第二治疗剂或疗法(参见实施例12.6ff.)。此外,观察到即使是单一的抗CCR8抗体治疗也显示出显著的治疗效果(见实施例12.4.2)。While significant response rates were achieved with monotherapy using the anti-CCR8 antibody of the present invention, it was surprisingly found that the therapeutic benefit could be further enhanced by combining the antibody with immune checkpoint inhibitors, further targeted therapies, or even nonspecific chemotherapy or radiotherapy. These combination therapies were particularly beneficial in challenging tumor models. In particular, certain combination therapy regimens were found to be effective in which a second therapeutic agent or therapy was administered only after the anti-CCR8 antibody had induced substantial Treg depletion (see Example 12.6ff.). Furthermore, significant therapeutic effects were observed even with monotherapy using the anti-CCR8 antibody (see Example 12.4.2).
1.5分层方案及诊断方法1.5 Stratification Scheme and Diagnostic Methods
在评估不同同基因小鼠模型对抗CCR8抗体治疗的反应性时,发明人可以确定可预测治疗效果和总体响应的几种机制、生物标志物和生物标志物组合。例如,令人惊讶地发现,对免疫检查点抑制剂(如PD-1、PD-L1或CTLA4抗体)的响应程度也可预测对抗CCR8抗体治疗的响应。由于PD-L1表达有时被用作预测免疫检查点抑制剂响应性的替代标志物,发明人评估了PD-L 1是否也可用于预测抗CCR8抗体治疗的响应性。这一假设最终可以通过相关数据得到证实,请参见实施例12.7.1。在鉴定最有可能受益于抗CCR8治疗的那些受试者的进一步尝试中,进一步的标志物基因例如免疫细胞和Treg标志物被评估为生物标志物(见实施例12.1.2、12.7.2、12.8)。In evaluating the responsiveness of different syngeneic mouse models to anti-CCR8 antibody therapy, the inventors were able to identify several mechanisms, biomarkers, and combinations of biomarkers that could predict treatment efficacy and overall response. For example, surprisingly, the degree of response to immune checkpoint inhibitors (such as PD-1, PD-L1, or CTLA4 antibodies) was also found to predict response to anti-CCR8 antibody therapy. Since PD-L1 expression is sometimes used as a surrogate biomarker for predicting responsiveness to immune checkpoint inhibitors, the inventors evaluated whether PD-L1 could also be used to predict responsiveness to anti-CCR8 antibody therapy. This hypothesis was ultimately confirmed with relevant data, see Example 12.7.1. In further attempts to identify those subjects most likely to benefit from anti-CCR8 therapy, further biomarker genes, such as immune cell and Treg biomarkers, were evaluated as biomarkers (see Examples 12.1.2, 12.7.2, 12.8).
附图说明Attached Figure Description
图1:人CC趋化因子受体和CXC趋化因子受体的比对。Figure 1: Comparison of human CC chemokine receptor and CXC chemokine receptor.
图2:从Uniprot检索人CCR8、食蟹猴CCR8和鼠CCR8序列并用Clustal Omega比对。b.CCR8受体结构示意图,其包含7个跨膜结构域(黑框)、三个细胞外环(ECL)、多个二硫键(SS)和一个细胞内C端部分以及包含“LID”结构域和富含酪氨酸结构域(TRD)的细胞外N端结构域。Figure 2: Human CCR8, cynomolgus monkey CCR8, and mouse CCR8 sequences retrieved from Uniprot and aligned using Clustal Omega. b. Schematic diagram of the CCR8 receptor structure, which includes 7 transmembrane domains (black boxes), three extracellular loops (ECL), multiple disulfide bonds (SS), an intracellular C-terminal portion, and an extracellular N-terminal domain containing the "LID" domain and a tyrosine-rich domain (TRD).
图3:在CCR8阳性靶细胞中通过FACS染色评估三种现有技术抗体。与同种型对照相比,所显示的现有技术抗体均未显示出FACS染色的变化。hAP-0068和MAB1429-100在用人CCR8稳定转染的293T细胞上进行了测试,而MAB8324在表达鼠CCR8的BW5147.3细胞上进行了测试。Figure 3: Evaluation of three existing-technology antibodies by FACS staining in CCR8-positive target cells. None of the existing-technology antibodies showed changes in FACS staining compared to the isotype control. hAP-0068 and MAB1429-100 were tested on 293T cells stably transfected with human CCR8, while MAB8324 was tested on BW5147.3 cells expressing mouse CCR8.
图4:寻找先导化合物的淘选策略:描述了两种主要的硫酸化肽选择策略。在所有策略中,在每一轮选择之前,都包括对相关或不相关的生物素化蛋白的去除步骤。Figure 4: Selection strategies for finding lead compounds: Two main sulfated peptide selection strategies are described. In all strategies, a step of removing relevant or irrelevant biotinylated proteins is included before each round of selection.
图5:获得抗鼠CCR8抗体的淘选策略:描述了基于硫酸化/非硫酸化肽混合的主要选择策略。在每一轮选择之前,对相关的生物素化蛋白质进行去除步骤。Figure 5: Selection strategy for obtaining anti-mouse CCR8 antibodies: The main selection strategy based on a mixture of sulfated/non-sulfated peptides is described. A detinction step of the relevant biotinylated protein is performed before each round of selection.
图6:结合表达人CCR8的CHO细胞的本发明抗体的FACS数据。Figure 6: FACS data of the antibody of the present invention in combination with CHO cells expressing human CCR8.
图7:结合表达食蟹猴CCR8的CHO细胞的本发明抗体的FACS数据。Figure 7: FACS data of the antibody of the present invention in combination with CHO cells expressing cynomolgus monkey CCR8.
图8:与激活的人Tregs(供体1)结合的候选者的FACS数据。右侧:使用BioLegend克隆L263G8确定的CCR8表达的百分比。Figure 8: FACS data of candidates binding with activated human Tregs (donor 1). Right: Percentage of CCR8 expression determined using BioLegend clone L263G8.
图9:本发明抗体TPP-21181和TPP-23411与表达人CCR8的CHO细胞结合的FACS数据。Figure 9: FACS data of the binding of the antibodies TPP-21181 and TPP-23411 of the present invention to CHO cells expressing human CCR8.
图10:本发明抗体TPP-21181和TPP-23411与表达食蟹猴CCR8的CHO细胞结合的FACS数据。Figure 10: FACS data of the binding of the antibodies TPP-21181 and TPP-23411 of the present invention to CHO cells expressing cynomolgus monkey CCR8.
图11:TPP-21360、L263G8和433H与表达人CCR8的CHO细胞的结合。Figure 11: Binding of TPP-21360, L263G8 and 433H to CHO cells expressing human CCR8.
图12:TPP-21360、L263G8和433H与表达食蟹猴CCR8的CHO细胞的结合。现有技术抗体仅显示出与食蟹猴CCR8的总体结合非常低(低饱和度)。然而,可以确定每种抗体的EC50值。Figure 12: Binding of TPP-21360, L263G8, and 433H to CHO cells expressing cynomolgus monkey CCR8. The prior art antibodies showed only very low overall binding (low saturation) to cynomolgus monkey CCR8. However, the EC50 value for each antibody could be determined.
图13:用本发明抗体TPP-23411激活的人Treg染色,门控策略。来自外周血单核细胞(PBMC)的CD4+和CD25+分选细胞用抗CD3和抗CD28珠(Treg扩增试剂盒,Miltenyi)激活。中间格:CD4+CD25+CD127low和Foxp3+的细胞。下格:用TPP-23411或L263G8染色后Treg上的CCR8表达。Figure 13: Staining of human Tregs activated with the antibody TPP-23411 of this invention, using a gating strategy. CD4+ and CD25+ sorted cells from peripheral blood mononuclear cells (PBMCs) were activated with anti-CD3 and anti-CD28 beads (Treg amplification kit, Miltenyi). Middle cell: CD4+CD25+CD127low and Foxp3+ cells. Bottom cell: CCR8 expression on Tregs after staining with TPP-23411 or L263G8.
图14:TPP-21360与具有模拟转染子的CHO细胞的结合。没有观察到非特异性结合。Figure 14: Binding of TPP-21360 to CHO cells with mimic transfectants. No nonspecific binding was observed.
图15:瞬时转染人CCR1的HEK细胞中的脱靶结合。大多数本发明的候选物仅显示出对CCR1的低脱靶结合。Figure 15: Off-target binding in HEK cells transiently transfected with human CCR1. Most candidates of this invention show only low off-target binding to CCR1.
图16:用人CCR4瞬时转染的HEK细胞中的脱靶结合。大多数本发明的候选物仅表现出对CCR4的低脱靶结合。Figure 16: Off-target binding in HEK cells transiently transfected with human CCR4. Most candidates of this invention exhibit only low off-target binding to CCR4.
图17:来自健康供体PBMC的不同免疫细胞群(CD4+T细胞、CD8+T细胞、以CD 19+表达为标志的B细胞、以CD11b+表达为标志的骨髓细胞、用抗CD3和抗CD28珠子激活CD4 T细胞4天,用抗CD3和抗CD28珠子激活CD8+T细胞4天)。Figure 17: Different immune cell populations from healthy donor PBMCs (CD4+ T cells, CD8+ T cells, B cells marked by CD19+ expression, bone marrow cells marked by CD11b+ expression, CD4 T cells activated with anti-CD3 and anti-CD28 beads for 4 days, and CD8+ T cells activated with anti-CD3 and anti-CD28 beads for 4 days).
图18:激活后CCR8在人Tregs中上调。激活后,随着MFI增加,CD4+CD25+纯化细胞中CCR8+细胞的百分比显著增加,而PBMC群体中CCR8+细胞的百分比略有增加。来自BioLegend的抗CCR8抗体用于这些实验。N=4个供体。Figure 18: CCR8 is upregulated in human Tregs after activation. Following activation, the percentage of CCR8+ cells in CD4+CD25+ purified cells significantly increased with increasing MFI, while the percentage of CCR8+ cells in the PBMC population increased slightly. Anti-CCR8 antibodies from BioLegend were used in these experiments. N = 4 donors.
图19:在作为靶细胞的表达人CCR8的HEK细胞中由野生型或无岩藻糖基化的本发明抗体TPP-19546、TPP-21360或TPP-23411诱导的ADCC。同种型对照:TPP-9808。Figure 19: ADCC induced by wild-type or unfucosylated antibodies of the present invention, TPP-19546, TPP-21360, or TPP-23411, in HEK cells expressing human CCR8 as target cells. Isotype control: TPP-9808.
图20:左图:作为靶细胞的激活的人Treg在第3天的CCR8+表达百分比。右图:由野生型或无岩藻糖基化的本发明抗体TPP-21360、TPP-23411在作为靶细胞的激活人Treg中诱导的ADCC。同种型对照:TPP-9808。结果在不同的供体中是可重复的(数据未显示)。Figure 20: Left panel: Percentage of CCR8+ expression in activated human Tregs as target cells on day 3. Right panel: ADCC induced by the present invention's antibodies TPP-21360 and TPP-23411 (wild-type or unfucosylated) in activated human Tregs as target cells. Isotype control: TPP-9808. Results were reproducible in different donors (data not shown).
图21:ADCP测定的方案。Figure 21: Protocol for ADCP determination.
图22:本发明抗体的野生型和非岩藻糖基化形式的ADCP测定显示在作为靶细胞的表达人CCR8的HEK细胞、作为效应细胞的以体外分化的M2c巨噬细胞中诱导的吞噬作用。本发明抗体TPP-19546、TPP-21360和TPP-23411的野生型和无岩藻糖基化形式诱导ADCP。TPP-9808是同种型对照。Mogamulizumab是一种已上市的抗CCR4抗体。Figure 22: ADCP assays of the wild-type and non-fucosylated forms of the antibodies of this invention show phagocytosis induced in HEK cells expressing human CCR8 as target cells and in in vitro differentiated M2c macrophages as effector cells. The wild-type and non-fucosylated forms of the antibodies of this invention, TPP-19546, TPP-21360, and TPP-23411, induced ADCP. TPP-9808 was an isotype control. Mogamulizumab is a marketed anti-CCR4 antibody.
图23:本发明抗体TPP-21360和TPP-23411的野生型和非岩藻糖基化形式的ADCP测定显示在作为靶细胞的来自两个不同供体的激活的人Treg中(上图或下图)和作为效应细胞的M2c巨噬细胞中诱导的吞噬作用。Figure 23: ADCP assays of the wild-type and non-fucosylated forms of the antibodies TPP-21360 and TPP-23411 of the present invention show phagocytosis induced in activated human Tregs from two different donors as target cells (top or bottom) and in M2c macrophages as effector cells.
图24:本发明抗体TPP-21360和TPP-23411的野生型和非岩藻糖基化形式的ADCP测定显示在作为靶细胞的激活的人Treg和作为效应细胞的M1巨噬细胞中诱导的吞噬作用。Figure 24: ADCP assays of wild-type and non-fucosylated forms of the antibodies TPP-21360 and TPP-23411 of the present invention show phagocytosis induced in activated human Treg cells as target cells and M1 macrophages as effector cells.
图25:在共表达用ProLink标记的人CCR8和EA的CHO细胞上,针对CCL1、TPP-23411、L263G8或433H用DiscoverX测定测量的β-arrestin信号传导的激活。正如预期的那样,CCR8配体CCL1(人)诱导β-arrestin信号传导。针对TPP-23411分析了额外的时间点,以确保在较早的时间点没有发生β-arrestin激活。所分析的抗体均未诱导β-arrestin信号激活。Figure 25: Activation of β-arrestin signaling, measured using DiscoverX assays against CCL1, TPP-23411, L263G8, or 433H, in CHO cells co-expressing human CCR8 and EA labeled with ProLink. As expected, the CCR8 ligand CCL1 (human) induces β-arrestin signaling. Additional time points were analyzed against TPP-23411 to ensure that β-arrestin activation did not occur at earlier time points. None of the analyzed antibodies induced β-arrestin signaling activation.
图26:用DiscoverX测定测量TP-23411、L263G8或433H对CCL1诱导的β-arrestin信号传导的阻断的评估。CCL1以其EC80(20ng/ml)使用。现有技术抗体L263G8和433H均在低抗体浓度下阻断由CCL1诱导的β-arrestin信号传导,而本发明抗体TPP-23411在这些浓度下未显示出任何作用。β-arrestin信号传导已被建议在内化中发挥作用。Figure 26: Evaluation of the blocking effect of TP-23411, L263G8, or 433H on CCL1-induced β-arrestin signaling using a DiscoverX assay. CCL1 was used at its EC80 (20 ng/ml). Prior art antibodies L263G8 and 433H both blocked CCL1-induced β-arrestin signaling at low antibody concentrations, while the present invention antibody TPP-23411 showed no effect at these concentrations. β-arrestin signaling has been suggested to play a role in internalization.
图27:Phospho Erk1/2 ELISA测定。用CCL1、TPP-23411、Biolegend L263G8或BD抗体433H处理表达人CCR8的CHO细胞,并在各自的时间点收集细胞裂解物。Figure 27: Phospho Erk1/2 ELISA assay. CHO cells expressing human CCR8 were treated with CCL1, TPP-23411, Biolegend L263G8, or BD antibody 433H, and cell lysates were collected at their respective time points.
图28:Phospho Erk1/2 ELISA测定。用CCL1、TPP-23411、Biolegend L263G8或BD抗体433H处理表达CCR8的激活的人Treg细胞,并在各自的时间点收集细胞裂解物。现有技术抗体Biolegend L263G8和BD抗体433H均诱导磷酸化Erk1/2水平的显著增加,例如在激活的人Treg中15分钟后,本发明的抗体并非如此。Figure 28: Phospho Erk1/2 ELISA assay. Activated human Treg cells expressing CCR8 were treated with CCL1, TPP-23411, Biolegend L263G8, or BD antibody 433H, and cell lysates were collected at their respective time points. Prior art antibodies Biolegend L263G8 and BD antibody 433H both induce a significant increase in phosphorylated Erk1/2 levels, for example, after 15 minutes in activated human Tregs, which is not the case with the antibodies of the present invention.
图29:磷酸化AKT ELISA测定。用CCL1、TPP-23411、Biolegend L263G8或BD抗体433H处理表达人CCR8的CHO细胞,并在各自的时间点收集细胞裂解物。Figure 29: Phosphorylated AKT ELISA assay. CHO cells expressing human CCR8 were treated with CCL1, TPP-23411, Biolegend L263G8, or BD antibody 433H, and cell lysates were collected at their respective time points.
图30:磷酸化AKT ELISA测定。用CCL1、TPP-23411、Biolegend L263G8或BD抗体433H处理表达CCR8的激活的人Treg细胞,并在各自的时间点收集细胞裂解物。现有技术抗体Biolegend L263G8和BD 433H均诱导激活的人Treg中磷酸化AKT水平的显著增加,例如15分钟后,而发明抗体的情况并非如此。Figure 30: Phosphorylated AKT ELISA assay. Activated human Treg cells expressing CCR8 were treated with CCL1, TPP-23411, Biolegend L263G8, or BD antibody 433H, and cell lysates were collected at their respective time points. Existing antibodies Biolegend L263G8 and BD 433H both induced a significant increase in phosphorylated AKT levels in activated human Tregs, for example, after 15 minutes, while this was not the case with the invented antibody.
图31:内化研究。a.商业抗人CCR8抗体Biolegend L263G8或BD抗体433H与内源性CCR8表达细胞系HuT78的FACS分析。b.基于细胞质强度点的商业抗人CCR8抗体与内源性CCR8表达细胞系HuT78的内化研究。TPP-5657:同种型对照。Figure 31: Internalization studies. a. FACS analysis of commercial anti-human CCR8 antibody Biolegend L263G8 or BD antibody 433H with the endogenous CCR8-expressing cell line HuT78. b. Internalization studies of commercial anti-human CCR8 antibody and the endogenous CCR8-expressing cell line HuT78 based on cytoplasmic strength points. TPP-5657: Isotype control.
图32:内化研究。a.商业抗鼠CCR8抗体SA2 14G2与鼠内源性CCR8表达细胞系BW5147.3的FACS分析。b.商业抗鼠CCR8抗体SA214G2与鼠内源性CCR8表达细胞系BW5147.3的内化研究。抗鼠CCR8现有技术抗体SA214G2引发内化。Figure 32: Internalization studies. a. FACS analysis of commercial anti-mouse CCR8 antibody SA214G2 and mouse endogenous CCR8-expressing cell line BW5147.3. b. Internalization study of commercial anti-mouse CCR8 antibody SA214G2 and mouse endogenous CCR8-expressing cell line BW5147.3. The existing anti-mouse CCR8 antibody SA214G2 induced internalization.
图33:本发明的抗人CCR8抗体TPP-21360和TPP-23411与内源性表达CCR8的细胞系TALL-1(a)和HuT78(b)的内化研究。两种抗体都显示出相同的内化行为,与同种型对照TPP-5657相当。Figure 33: Internalization studies of the anti-human CCR8 antibodies TPP-21360 and TPP-23411 of the present invention with the endogenously CCR8-expressing cell lines TALL-1(a) and HuT78(b). Both antibodies showed the same internalization behavior, comparable to the isotype control TPP-5657.
图34:本发明抗人CCR8抗体TPP-21360和TPP-23411与内源性CCR8表达细胞系TALL-1(a)和HuT78(b)的FACS分析。两种抗体都显示出与细胞系相同的结合效力。Figure 34: FACS analysis of the anti-human CCR8 antibodies TPP-21360 and TPP-23411 of the present invention with endogenous CCR8-expressing cell lines TALL-1(a) and HuT78(b). Both antibodies showed the same binding potency to the cell lines.
图35:代表一组全面的人类组织和细胞类型的11642个样本中的CCR8 mRNA表达,如affymetrix探针208059at所测量。使用refRMA方法对所有样本进行共同归一化(Katz,Simon,et al.″A summarization approach for Affymetrix GeneChip data using areference training set from a large,biologically diverse database.″BMCbioinformatics 7.1(2006):1-11)。深灰色框着色表示相应组中的中值样本具有显著高于背景噪声的探针信号强度(由affymetrix的MAS5算法估计,参见Pepper,Stuart D.,etal.″The utility of MAS5expression summary and detection call algorithms.″BMCbioinformatics8.1(2007):1-12)。显著高于背景噪声的中值CCR8表达仅在激活的调节性T细胞以及肿瘤浸润淋巴细胞中观察到。基于递减的平均表达对组进行排序。Figure 35: CCR8 mRNA expression in 11,642 samples representing a comprehensive set of human tissues and cell types, as measured by the affymetrix probe 208059at. All samples were common normalized using the refRMA method (Katz, Simon, et al. "A summary approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database." BMCbioinformatics 7.1 (2006): 1–11). Dark gray boxes indicate median samples in the corresponding groups with probe signal intensities significantly higher than background noise (estimated by the affymetrix MAS5 algorithm, see Pepper, Stuart D., et al. "The utility of MAS5 expression summary and detection call algorithms." BMCbioinformatics 8.1 (2007): 1–12). Median CCR8 expression significantly higher than background noise was observed only in activated regulatory T cells and tumor-infiltrating lymphocytes. Groups were ranked based on decreasing mean expression.
图36:在50种不同TCGA(https://www.cancer.gov/tcga)肿瘤适应症(深灰色方框)、相应的正常组织(白色方框)以及也按肿瘤适应症分组(浅灰色方框)的整个CCLE肿瘤细胞系图(Barretina,Jordi,et al.″The Cancer Cell Line Encyclopedia enablespredictive modelling of anticancer drug sensitivity.″Nature 483.7391(2012):603-607)中通过RNA-seq测量的CCR8 mRNA表达。根据中值表达对组进行排序。CCR8表达最高的适应症是乳腺癌、肺腺癌(ADC)和鳞状细胞癌(SCC)、头颈部恶性肿瘤以及食管肿瘤。在除胰腺腺癌和黑色素瘤外的所有适应症中,肿瘤中的表达与相应的正常组织相比更高。在上皮来源的相应肿瘤细胞系中观察到很少或没有表达,表明CCR8不由肿瘤细胞表达,而只由肿瘤浸润T细胞表达。原则上,具有CCR8+Treg细胞浸润的每个肿瘤适应症都应符合抗CCR8抗体治疗的条件。Figure 36: CCR8 mRNA expression measured by RNA-seq in 50 different TCGA (https://www.cancer.gov/tcga) tumor indications (dark gray boxes), corresponding normal tissues (white boxes), and the entire CCLE tumor cell line map, also grouped by tumor indication (light gray boxes) (Barretina, Jordi, et al. "The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity." Nature 483.7391(2012):603-607). Groups were ranked according to median expression. The indications with the highest CCR8 expression were breast cancer, lung adenocarcinoma (ADC) and squamous cell carcinoma (SCC), head and neck malignancies, and esophageal tumors. In all indications except pancreatic adenocarcinoma and melanoma, expression in tumors was higher than in the corresponding normal tissues. The observation of little or no expression in corresponding epithelial-derived tumor cell lines indicates that CCR8 is not expressed by tumor cells, but only by tumor-infiltrating T cells. In principle, every tumor indication with CCR8+ Treg cell infiltration should meet the criteria for anti-CCR8 antibody therapy.
图37:人非小细胞肺癌组织(NSCLC)或人黑色素瘤组织中Treg标志物FOXP3和CCR8(克隆433H)的免疫组织化学染色。Figure 37: Immunohistochemical staining of Treg markers FOXP3 and CCR8 (clone 433H) in human non-small cell lung cancer (NSCLC) or human melanoma tissues.
图38:基于CCR4、CCR8、OX40、GITR和CD25进行FACS分选的T细胞群进行染色。只有CCR8对激活的Tregs具有特异性。OX40、GITR和CD25在受刺激的CD8+Teff细胞和CD4+T细胞(CD4+CD25+Foxp3-)上显著表达。深灰色:同种型对照,浅灰色:靶标染色。Figure 38: Staining of T cell populations sorted by FACS based on CCR4, CCR8, OX40, GITR, and CD25. Only CCR8 is specific for activated Tregs. OX40, GITR, and CD25 are significantly expressed in stimulated CD8+ Teff cells and CD4+ T cells (CD4+CD25+Foxp3-). Dark gray: isotype control; light gray: target staining.
图39:通过单细胞RNA-seq所测量的在从不同肿瘤实体提取的不同T细胞亚群中的CCR8的表达。对于这些肿瘤,CCR8 mRNA的表达在很大程度上局限于肿瘤组织中的调节性T细胞(浅灰色框),而在正常组织以及CD4辅助T和CD8细胞毒性T细胞(分别为中灰色框和深灰色框)中的调节性T细胞中基本不存在。上小图:结直肠肿瘤组织(肿瘤)或邻近正常组织(正常)。中间小图:肝癌组织(肿瘤)或邻近正常组织(正常)。下小图:肺癌组织(肿瘤)或邻近的正常肺组织和外周血(正常)。样本大小N表示每个类别中的细胞数量。根据标志物基因FOXP3、CD4(但没有FOXP3)和CD8A/B的表达,分别将细胞指定为调节性T细胞、辅助性T细胞或细胞毒性T细胞。Figure 39: CCR8 expression in different T cell subsets extracted from different tumor entities, measured by single-cell RNA-seq. For these tumors, CCR8 mRNA expression was largely confined to regulatory T cells in tumor tissue (light gray box), and virtually absent in regulatory T cells in normal tissue and CD4 helper T and CD8 cytotoxic T cells (medium gray and dark gray boxes, respectively). Top panel: Colorectal tumor tissue (tumor) or adjacent normal tissue (normal). Middle panel: Liver cancer tissue (tumor) or adjacent normal tissue (normal). Bottom panel: Lung cancer tissue (tumor) or adjacent normal lung tissue and peripheral blood (normal). Sample size N represents the number of cells in each category. Cells were designated as regulatory T cells, helper T cells, or cytotoxic T cells based on the expression of the marker genes FOXP3, CD4 (but without FOXP3), and CD8A/B, respectively.
图40:来自NSCLC、CRC(结肠直肠癌)或RCC(肾癌)的Treg、巨噬细胞、T细胞或肿瘤细胞群用抗CCR8抗体或同种型对照染色,并通过流式细胞术进行分析。X轴:对数偏移最大105;Y轴:标准化为模式的强度。浅灰色:同种型对照。深灰色:CCR8。肿瘤内人Tregs上的特定CCR8表达由箭头指示。Figure 40: Tregs, macrophages, T cells, or tumor cell populations from NSCLC, CRC (colorectal cancer), or RCC (renal cancer) stained with anti-CCR8 antibody or allotype controls and analyzed by flow cytometry. X-axis: logarithmic shift up to 10⁵ ; Y-axis: normalized to pattern intensity. Light gray: allotype control. Dark gray: CCR8. Specific CCR8 expression on human Tregs within the tumor is indicated by arrows.
图41:用不同剂量的抗CCR8抗体或抗PDL1抗体处理后的CT26肿瘤生长。Figure 41: CT26 tumor growth after treatment with different doses of anti-CCR8 antibody or anti-PDL1 antibody.
图42:在用不同剂量的抗CCR8抗体、抗PDL1抗体或同种型对照治疗后,携带CT26肿瘤的小鼠的蛛网图。Figure 42: Spider web diagram of mice carrying CT26 tumors after treatment with different doses of anti-CCR8 antibody, anti-PDL1 antibody or isotype control.
图43:第二次抗体处理后24小时肿瘤内免疫细胞的FACS分析。瘤内Tregs的分析。对于10mg/kg、1mg/kg或0.1mg/kg,抗CCR8抗体TPP15285导致肿瘤内Treg平均减少至同种型对照中Treg的13%、33%或47%。对于10mg/kg、1mg/kg或0.1mg/kg,抗CCR8抗体TPP15286导致肿瘤内Treg平均减少至同种型对照中Treg的10%、9%或14%,参加表12.2.1,肿瘤内CD8+T细胞的分析。表12.2.1CD8+T细胞与Treg细胞的比率的分析显示了同种型对照的平均增加百分比。抗CCR8抗体TPP15286导致CD8+细胞与Treg细胞的比率平均增加44(10mg/kg)、87(1mg/kg)或68(0.1mg/kg)。抗CCR8抗体TPP15285导致CD8+细胞与Treg细胞的比率平均增加64(10mg/kg)、16(1mg/kg)或10(0.1mg/kg)。分析CD4+conv T细胞与Treg细胞的比率。Figure 43: FACS analysis of intratumoral immune cells 24 hours after the second antibody treatment. Analysis of intratumoral Tregs. For 10 mg/kg, 1 mg/kg, or 0.1 mg/kg, anti-CCR8 antibody TPP15285 resulted in a mean reduction of intratumoral Tregs to 13%, 33%, or 47% of the Tregs in the isotype control, respectively. For 10 mg/kg, 1 mg/kg, or 0.1 mg/kg, anti-CCR8 antibody TPP15286 resulted in a mean reduction of intratumoral Tregs to 10%, 9%, or 14% of the Tregs in the isotype control, respectively. See Table 12.2.1 for the analysis of intratumoral CD8+ T cells. Table 12.2.1 shows the mean percentage increase in the ratio of CD8+ T cells to Treg cells in the isotype control. Anti-CCR8 antibody TPP15286 resulted in a mean increase in the ratio of CD8+ cells to Treg cells of 44 (10 mg/kg), 87 (1 mg/kg), or 68 (0.1 mg/kg). The anti-CCR8 antibody TPP15285 resulted in an average increase in the ratio of CD8+ cells to Treg cells of 64 (10 mg/kg), 16 (1 mg/kg), or 10 (0.1 mg/kg). The ratio of CD4+ conv T cells to Treg cells was analyzed.
图44:用糖基化(TPP-14095、TPP-14099、TPP-15285、TPP-15286)或非糖基化(TPP-18208、TPP-18209)抗CCR8抗体处理后的CT26肿瘤生长。糖基化在很大程度上消除了抗肿瘤作用。Figure 44: Growth of CT26 tumors treated with glycosylated (TPP-14095, TPP-14099, TPP-15285, TPP-15286) or non-glycosylated (TPP-18208, TPP-18209) anti-CCR8 antibodies. Glycosylation largely eliminates the anti-tumor effect.
图45:用糖基化(TPP-14095、TPP-14099、TPP-15285、TPP-15286)或非糖基化(TPP-18208、TPP-18209)抗CCR8抗体处理后的CT26荷瘤小鼠的蛛网图。糖基化在很大程度上消除了抗肿瘤作用,表明抗肿瘤功效的ADCC/ADCP依赖机制。Figure 45: Spider web diagram of CT26 tumor-bearing mice treated with glycosylated (TPP-14095, TPP-14099, TPP-15285, TPP-15286) or non-glycosylated (TPP-18208, TPP-18209) anti-CCR8 antibodies. Glycosylation largely eliminates the antitumor effect, indicating an ADCC/ADCP-dependent mechanism of antitumor efficacy.
图46:第二次抗体处理后24小时免疫细胞的FACS分析。肿瘤内CD45+细胞的绝对数量。肿瘤内CD45+CD8+T细胞的绝对数量。肿瘤内CD8+T细胞的绝对数量。肿瘤内CD4+conv细胞的绝对数量。通过流式细胞术对肿瘤内Treg耗竭的分析,显示绝对细胞数。抗体施用后相对于相应同种型对照的残余Treg的平均百分比对于TPP-14095为15.6%,对于TPP-14099为28.2%,对于TPP-15285为8.7%,对于TPP-15286为36.5%。对于非糖基化抗体,未观察到Treg减少。肿瘤内CD45+细胞中的CD8+T细胞的百分比。CD8+T细胞:Treg比率。CD4+conv:Treg比率。CD4+T细胞的Treg细胞百分比。肿瘤内4-1BB+Treg细胞的绝对数量。肿瘤内4-1BB+CD4+conv细胞的绝对数量。Figure 46: FACS analysis of immune cells 24 hours after the second antibody treatment. Absolute number of CD45+ cells in the tumor. Absolute number of CD45+CD8+ T cells in the tumor. Absolute number of CD8+ T cells in the tumor. Absolute number of CD4+conv cells in the tumor. Analysis of Treg depletion in the tumor by flow cytometry, showing the absolute cell count. The mean percentage of residual Tregs relative to the corresponding isotype control after antibody administration was 15.6% for TPP-14095, 28.2% for TPP-14099, 8.7% for TPP-15285, and 36.5% for TPP-15286. No reduction in Tregs was observed for non-glycosylated antibodies. Percentage of CD8+ T cells among CD45+ cells in the tumor. CD8+ T cell:Treg ratio. CD4+conv:Treg ratio. Percentage of Treg cells among CD4+ T cells. Absolute number of 4-1BB+ Treg cells in the tumor. The absolute number of 4-1BB+CD4+conv cells within the tumor.
图47:用不同剂量的抗CCR8抗体TPP-15285处理后的EMT6肿瘤生长。显著性由1-Way ANOVA加上对数转换后Sidak的post-test确定。Figure 47: EMT6 tumor growth after treatment with different doses of anti-CCR8 antibody TPP-15285. Significance was determined by 1-way ANOVA plus a log-transformed Sidak post-test.
图48:用不同剂量的抗CCR8抗体TPP-15285或抗CTLA4抗体处理后第19天的EMT6肿瘤生长。Figure 48: EMT6 tumor growth on day 19 after treatment with different doses of anti-CCR8 antibody TPP-15285 or anti-CTLA4 antibody.
图49:用不同剂量的抗CCR8抗体TPP-15285或抗CTLA4抗体处理后的EMT6荷瘤小鼠的蛛网图。Figure 49: Spider web diagram of EMT6 tumor-bearing mice treated with different doses of anti-CCR8 antibody TPP-15285 or anti-CTLA4 antibody.
图50:用不同剂量的CCR8抗体TPP-15285或抗CTLA4抗体治疗后、第二次治疗后24小时或研究结束时,EMT6荷瘤小鼠免疫细胞的FACS分析。肿瘤内Treg细胞的绝对数量。观察到显著差异,例如在两个时间点使用10mg/kg的抗CCR8抗体。CD8阳性细胞与Treg的比率。CD4+conv细胞与Treg的比率。CD4+T细胞中的Treg细胞百分比。Figure 50: FACS analysis of immune cells from EMT6 tumor-bearing mice after treatment with different doses of CCR8 antibody TPP-15285 or anti-CTLA4 antibody, 24 hours after the second treatment, or at the end of the study. Absolute number of Treg cells within the tumor. Significant differences were observed, for example, when using 10 mg/kg anti-CCR8 antibody at both time points. Ratio of CD8-positive cells to Tregs. Ratio of CD4+ conv cells to Tregs. Percentage of Treg cells among CD4+ T cells.
图51:用不同剂量抗CCR8抗体TPP-15285或抗CTLA4抗体治疗后、第二次治疗后24小时或研究结束时,EMT6荷瘤小鼠免疫细胞的FACS分析。肿瘤内CD45+细胞的绝对数量。肿瘤内CD4+conv细胞的绝对数量。肿瘤内CD4+T细胞的绝对数量。肿瘤内激活的CD8+T细胞的绝对数量。肿瘤内NK细胞的绝对数量。肿瘤内CD8+T细胞的绝对数量。观察到差异,例如在研究结束时使用10mg/kg的抗CCR8抗体。Figure 51: FACS analysis of immune cells from EMT6 tumor-bearing mice after treatment with different doses of anti-CCR8 antibody TPP-15285 or anti-CTLA4 antibody, 24 hours after the second treatment, or at the end of the study. Absolute number of CD45+ cells within the tumor. Absolute number of CD4+ conv cells within the tumor. Absolute number of CD4+ T cells within the tumor. Absolute number of activated CD8+ T cells within the tumor. Absolute number of NK cells within the tumor. Absolute number of CD8+ T cells within the tumor. Differences were observed, for example, when 10 mg/kg of anti-CCR8 antibody was used at the end of the study.
图52:不同剂量抗CCR8抗体TPP-15285或抗PDL1抗体处理后F9肿瘤生长情况。Figure 52: F9 tumor growth after treatment with different doses of anti-CCR8 antibody TPP-15285 or anti-PDL1 antibody.
图53:开始用不同剂量的抗CCR8抗体TPP-15285或抗PDL1抗体治疗后第16天的F9肿瘤体积。至少对于10mg/kg的抗体剂量观察到显著改善。Figure 53: F9 tumor volume on day 16 after starting treatment with different doses of anti-CCR8 antibody TPP-15285 or anti-PDL1 antibody. Significant improvement was observed at least for antibody doses of 10 mg/kg.
图54:不同剂量的抗CCR8抗体或抗PDL1抗体治疗后F9荷瘤小鼠的蛛网图。Figure 54: Spider diagram of F9 tumor-bearing mice after treatment with different doses of anti-CCR8 antibody or anti-PDL1 antibody.
图55:第二次抗体处理24小时后,通过FACS分析的抗CCR8抗体或抗PDL1抗体对免疫细胞群及其在F9肿瘤中的比率的影响。与匹配的同种型对照相比,抗CCR8抗体增加了肿瘤内CD45+T细胞、肿瘤内CD4+T细胞、肿瘤内CD8+T细胞、肿瘤内CD4+convT细胞和肿瘤内NK细胞的绝对数量。10mg/kg的抗CCR8抗体降低了肿瘤内Treg细胞(CD4+、CD25+、FoxP3+)的绝对数量。Figure 55: Effects of anti-CCR8 or anti-PDL1 antibodies on immune cell populations and their ratios in F9 tumors, analyzed by FACS 24 hours after the second antibody treatment. Compared with matched isotype controls, anti-CCR8 antibody increased the absolute numbers of intratumoral CD45+ T cells, intratumoral CD4+ T cells, intratumoral CD8+ T cells, intratumoral CD4+ convT cells, and intratumoral NK cells. 10 mg/kg of anti-CCR8 antibody decreased the absolute number of intratumoral Treg cells (CD4+, CD25+, FoxP3+).
图56:第二次处理后24小时通过FACS分析的抗CCR8抗体或抗PDL1抗体对免疫细胞群的影响及其在F9肿瘤中的比率,绘制为CD8+T细胞与Treg的比率、Treg与CD4+T细胞的频率,CD8+T细胞中4-1BB+细胞的频率、Tregs中4-1BB+细胞的频率和常规CD4+T细胞中4-1BB+细胞的频率。在10mg/kg时,抗CCR8抗体将CD8+细胞与Treg细胞的比率增加到大约54或更高,参见表12.5.1。Figure 56: Effects of anti-CCR8 or anti-PDL1 antibodies on immune cell populations and their ratios in F9 tumors, analyzed by FACS 24 hours after the second treatment. The plots are shown as the ratio of CD8+ T cells to Tregs, the frequency of Tregs to CD4+ T cells, the frequency of 4-1BB+ cells in CD8+ T cells, the frequency of 4-1BB+ cells in Tregs, and the frequency of 4-1BB+ cells in conventional CD4+ T cells. At 10 mg/kg, anti-CCR8 antibody increased the ratio of CD8+ cells to Tregs to approximately 54 or higher (see Table 12.5.1).
图57:联合治疗在C38荷瘤小鼠中的功效。a.用抗CCR8替代抗体TPP-14099或TPP-15285或抗PD-L1抗体治疗后或与3mg/kg抗PDL1抗体、10mg/kgTPP-15285联合治疗后的C38肿瘤生长。显著性由1-WayANOVA加上对数转换后Sidak的post-test确定。b.用抗鼠CCR8抗体TPP-15285(10mg/kg)、抗鼠PD-L1抗体(PDL1,3mg/kg)或TPP-1528(10mg/kg)和抗鼠PD-1抗体(3mg/kg)的组合处理后C38荷瘤小鼠的存活图。Figure 57: Efficacy of combination therapy in C38 tumor-bearing mice. a. C38 tumor growth after treatment with anti-CCR8 replacement antibody TPP-14099 or TPP-15285 or anti-PD-L1 antibody, or in combination with 3 mg/kg anti-PDL1 antibody and 10 mg/kg TPP-15285. Significance was determined by 1-Way ANOVA plus a log-transformed Sidak post-test. b. Survival of C38 tumor-bearing mice after treatment with anti-mouse CCR8 antibody TPP-15285 (10 mg/kg), anti-mouse PD-L1 antibody (PDL1, 3 mg/kg), or a combination of TPP-1528 (10 mg/kg) and anti-mouse PD-1 antibody (3 mg/kg).
图58:通过流式细胞术分析C38肿瘤中的肿瘤Treg耗竭(第二抗体处理后24小时取样)。C38荷瘤小鼠接受抗CCR8替代抗体TPP-14099或TPP-15285或抗PD-L1抗体单药治疗,或TPP-15285与抗PD-L1抗体的联合治疗。绝对Treg耗竭。CD8+T细胞/Treg细胞比率。Figure 58: Analysis of tumor Treg exhaustion in C38 tumors by flow cytometry (sampled 24 hours after secondary antibody treatment). C38 tumor-bearing mice received single-agent treatment with anti-CCR8 alternative antibody TPP-14099 or TPP-15285 or anti-PD-L1 antibody, or combination therapy with TPP-15285 and anti-PD-L1 antibody. Absolute Treg exhaustion. CD8+ T cell/Treg cell ratio.
图59:通过流式细胞术分析的C38肿瘤中的CD11+F4/80+巨噬细胞(研究结束时取样)。Figure 59: CD11+F4/80+ macrophages in C38 tumors analyzed by flow cytometry (sampled at the end of the study).
图60:用TPP-15285、抗CTLA4抗体或两者处理后的B16F10-OVA肿瘤生长。Figure 60: B16F10-OVA tumor growth after treatment with TPP-15285, anti-CTLA4 antibody, or both.
图61:用抗鼠CCR8抗体TPP-15285(1mg/kg)、抗鼠PD-1抗体(CDRs:atezolizumab,10mg/kg)或TPP-15285(1mg/kg)和抗鼠PD-1抗体(10mg/kg)的组合处理后的EMT-6肿瘤生长,(每周两次i.p.)。均值加标准差。Figure 61: EMT-6 tumor growth after treatment with anti-mouse CCR8 antibody TPP-15285 (1 mg/kg), anti-mouse PD-1 antibody (CDRs: atezolizumab, 10 mg/kg), or a combination of TPP-15285 (1 mg/kg) and anti-mouse PD-1 antibody (10 mg/kg) (twice weekly i.p.). Mean plus standard deviation.
图62:通过流式细胞术分析的EMT-6肿瘤中免疫细胞群的FACS分析,在第二次抗体处理后24小时取样。CD4+T细胞、Treg、CD8+T细胞、NK细胞、CD8+T细胞与Treg的比率。方框和晶须(whisker),最小值到最大值与中值(GraphPad)。Figure 62: FACS analysis of immune cell populations in EMT-6 tumors by flow cytometry, sampled 24 hours after the second antibody treatment. Ratios of CD4+ T cells, Tregs, CD8+ T cells, NK cells, and CD8+ T cells to Tregs. Boxes and whiskers, minimum to maximum and median values (GraphPad).
图63:用抗鼠CCR8抗体TPP-15285(5mg/kg)、抗鼠PD-1抗体(CDR:atezolizumab,5mg/kg)或TPP-15285(5mg/kg)和抗鼠PD-1抗体(5mg/kg)的组合处理后C38荷瘤小鼠的分析,(每周两次i.p.)。a.肿瘤体积。均值加标准差。b.存活图。Figure 63: Analysis of C38 tumor-bearing mice treated with anti-mouse CCR8 antibody TPP-15285 (5 mg/kg), anti-mouse PD-1 antibody (CDR: atezolizumab, 5 mg/kg), or a combination of TPP-15285 (5 mg/kg) and anti-mouse PD-1 antibody (5 mg/kg), (twice weekly i.p.). a. Tumor volume. Mean plus standard deviation. b. Survival plot.
图64:通过流式细胞术分析C38肿瘤中的肿瘤CD4+T细胞、Treg、CD8+T细胞、NK细胞或CD8+T细胞与Treg的比率(第二次抗体治疗后24小时取样)。Figure 64: Analysis of the ratio of tumor CD4+ T cells, Tregs, CD8+ T cells, NK cells, or CD8+ T cells to Tregs in C38 tumors by flow cytometry (sampled 24 hours after the second antibody treatment).
图65:单独使用抗CCR8抗体TPP-15285(10mg/kg)、单独使用抗PD-1抗体(aPD-1,CDRs:atezolizumab,10mg/kg)或TPP-1528(10mg/kg)和抗PD-1单抗(10mg/kg)的顺序组合治疗后的MB49肿瘤生长(均每周两次i.p.)。Figure 65: MB49 tumor growth after treatment with anti-CCR8 antibody TPP-15285 (10 mg/kg) alone, anti-PD-1 antibody (aPD-1, CDRs: atezolizumab, 10 mg/kg) alone, or TPP-1528 (10 mg/kg) and anti-PD-1 monoclonal antibody (10 mg/kg) in sequence (all twice weekly i.p.).
图66:通过流式细胞术分析MB49肿瘤中的CD45+细胞、Tregs、CD8+T细胞、NK细胞和CD8与Treg的比率(研究结束时取样)。Figure 66: Analysis of CD45+ cells, Tregs, CD8+ T cells, NK cells, and the ratio of CD8 to Treg in MB49 tumors by flow cytometry (samples taken at the end of the study).
图67:用抗CCR8抗体TPP-15285(5mg/kg,q3/4d i.p.)、奥沙利铂(5mg/kg、q4di.p..)、多柔比星(6mg/kg,i.v.SD)、多烯紫杉醇(10mg/kg,q2dx5,i.v.)或TPP-15285与奥沙利铂、多柔比星或多烯紫杉醇的组合治疗后的EMT-6肿瘤生长。Figure 67: EMT-6 tumor growth after treatment with anti-CCR8 antibody TPP-15285 (5 mg/kg, q3/4d i.p.), oxaliplatin (5 mg/kg, q4d i.p.), doxorubicin (6 mg/kg, i.v. SD), docetaxel (10 mg/kg, q2dx5, i.v.), or TPP-15285 in combination with oxaliplatin, doxorubicin, or docetaxel.
图68:用抗CCR8抗体TPP-15285、吉西他滨或TPP-15285与吉西他滨的组合治疗后的MB49肿瘤生长。Figure 68: MB49 tumor growth after treatment with anti-CCR8 antibody TPP-15285, gemcitabine, or a combination of TPP-15285 and gemcitabine.
图69:单独使用抗CCR8抗体TPP-15285(10mg/kg)、单独使用抗PD-1抗体(aPD-1,CDRs:atezolizumab,10mg/kg),单独使用抗PD-L1抗体(10mg/kg)、单独使用抗CTLA4抗体、TPP-15285(10mg/kg)和抗鼠PD-1抗体(10mg/kg)的组合或TPP-15285(10mg/kg)和抗PD-L1抗体的组合治疗后的Lewis肺肿瘤生长。Figure 69: Lewis lung tumor growth after treatment with anti-CCR8 antibody TPP-15285 (10 mg/kg) alone, anti-PD-1 antibody (aPD-1, CDRs: atezolizumab, 10 mg/kg) alone, anti-PD-L1 antibody (10 mg/kg) alone, anti-CTLA4 antibody alone, combination of TPP-15285 (10 mg/kg) and anti-mouse PD-1 antibody (10 mg/kg) alone, or combination of TPP-15285 (10 mg/kg) and anti-PD-L1 antibody alone.
图70:抗CCR8抗体TPP-15285(3mg/kg)或放疗(RT,3x2Gy)单独或联合治疗后的EMT-6肿瘤生长。显著性由1-Way ANOVA加上对数转换后Sidak的post-test确定。Figure 70: EMT-6 tumor growth after treatment with anti-CCR8 antibody TPP-15285 (3 mg/kg) or radiotherapy (RT, 3 x 2 Gy) alone or in combination. Significance was determined by 1-way ANOVA plus a log-transformed post-test of Sidak.
图71:用同种型对照(TPP-9809)或抗CCR8抗体(TPP-14099)处理的不同同基因肿瘤模型中不同免疫细胞标志物的mRNA表达水平。同种型治疗对照组中的中值表达设为零。通过RSEM算法估计,基因表达以百万分之一的转录物(TPM)测量。Treg标志物Foxp3。在用TPP-14099处理的CT26、H22、Hepa1-6和RM1模型中观察到明显更高的Foxp3水平,表明在施用至少三剂TPP-1409后Treg浸润增加。Figure 71: mRNA expression levels of different immune cell markers in different syngeneic tumor models treated with allotype control (TPP-9809) or anti-CCR8 antibody (TPP-14099). Median expression in the allotype-treated control group was set to zero. Gene expression was estimated as part of transcript (TPM) using RSEM algorithm. Treg marker Foxp3. Significantly higher Foxp3 levels were observed in the CT26, H22, Hepa1-6, and RM1 models treated with TPP-14099, indicating increased Treg infiltration after at least three doses of TPP-1409.
图72:炎症标志物lfng。在用TPP-14099处理的H22、CT26和RM1模型中观察到显著更高的lfng水平,表明TPP-1409诱导了强烈的促炎活性。Figure 72: Inflammatory marker lfng. Significantly higher lfng levels were observed in the H22, CT26, and RM1 models treated with TPP-14099, indicating that TPP-1409 induces strong pro-inflammatory activity.
图73:巨噬细胞标志物Ms4a7。在用TPP-14099处理的CT26、H22和Hepa1-6模型中观察到明显更高的Ms4a8水平,表明TPP-1409导致巨噬细胞浸润增加。Figure 73: Macrophage marker Ms4a7. Significantly higher Ms4a8 levels were observed in the CT26, H22, and Hepa1-6 models treated with TPP-14099, indicating that TPP-1409 leads to increased macrophage infiltration.
图74:细胞毒性T细胞标志物Cd8a和Cd8b1。在用TPP-14099处理的CT26、H22、RM1和Hepa1-6模型中观察到明显更高的细胞毒性T淋巴细胞水平,表明TPP-1409诱导细胞毒性T细胞浸润和/或增殖。Figure 74: Cytotoxic T cell markers Cd8a and Cd8b1. Significantly higher levels of cytotoxic T lymphocytes were observed in the CT26, H22, RM1, and Hepa1-6 models treated with TPP-14099, indicating that TPP-1409 induces cytotoxic T cell infiltration and/or proliferation.
图75:自然杀伤(NK)细胞标志物Ncrl。在用TPP-14099处理的CT26、H22和Hepa1-6模型中观察到明显更高的NK细胞水平。Figure 75: Natural killer (NK) cell marker Ncrl. Significantly higher NK cell levels were observed in the CT26, H22, and Hepa1-6 models treated with TPP-14099.
图76:Pan T细胞标志物Cd3e/d/g。在用TPP-14099处理的CT26、H22和Hepa1-6模型中观察到明显更高的T细胞水平。Figure 76: Pan T cell marker Cd3e/d/g. Significantly higher T cell levels were observed in the CT26, H22, and Hepa1-6 models treated with TPP-14099.
图77:激活的Treg标志物和抗体靶标Ccr8。在用TPP-14099处理的CT26、H22和Hepa1-6模型中观察到显著更高的Ccr8水平。Figure 77: Activated Treg markers and antibody target Ccr8. Significantly higher Ccr8 levels were observed in the CT26, H22, and Hepa1-6 models treated with TPP-14099.
图78:高度特异性促炎性M1巨噬细胞标志物Acod1(a)和高度特异性抗炎性M2巨噬细胞标志物Mrc1(b)。在用TPP-14099处理的CT26、4T1、H22、Hepa1-6和RM1模型中观察到明显更高的M1巨噬细胞水平,而在用TPP-14099处理的所有模型中没有观察到明显更高的M2巨噬细胞水平。Figure 78: Acod1 (a), a highly specific pro-inflammatory M1 macrophage marker, and Mrc1 (b), a highly specific anti-inflammatory M2 macrophage marker. Significantly higher M1 macrophage levels were observed in the CT26, 4T1, H22, Hepa1-6, and RM1 models treated with TPP-14099, while no significantly higher M2 macrophage levels were observed in any of the models treated with TPP-14099.
图79:高特异性促炎M1巨噬细胞标志物Acod1和高特异性抗炎M2巨噬细胞标志物Mrc1的比率。总之,多剂量的抗CCR8抗体TPP-14099增加了这些肿瘤模型中的M1/M2巨噬细胞比率。Figure 79: Ratio of highly specific pro-inflammatory M1 macrophage marker Acod1 to highly specific anti-inflammatory M2 macrophage marker Mrc1. In summary, multiple doses of the anti-CCR8 antibody TPP-14099 increased the M1/M2 macrophage ratio in these tumor models.
图80:B细胞标志物Cd19和Cd22。在用TPP-14099处理的CT26、H22、RM1和Hepa1-6模型中观察到明显更高的B细胞水平。抗CCR8抗体似乎将B细胞募集到肿瘤中。不受理论的束缚,B细胞的募集可能影响TPP-14099引发的抗肿瘤响应。Figure 80: B-cell markers Cd19 and Cd22. Significantly higher B-cell levels were observed in the CT26, H22, RM1, and Hepa1-6 models treated with TPP-14099. The anti-CCR8 antibody appears to recruit B cells to the tumor. Unbound by theory, B-cell recruitment may influence the anti-tumor response induced by TPP-14099.
图81:LTta/b以及Cxcr5及其配体Cxcl13的表达水平。这些标志物对于淋巴结和三级淋巴结构的发育至关重要(Cyster,Jason G.″Blown away:the unexpected role oflymphotoxin in lymphoid organ development.″The Journal of Immunology 192.5(2014):2007-2009.,and Cupedo,Tom,et al.″Induction of secondary and tertiarylymphoid structures in the skin.″Immunity 21.5(2004):655-667),这是人类抗肿瘤作用的关键驱动因素(参见Dieu-Nosjean,Marie-Caroline,et al.″Tertiary lymphoidstructures,drivers of the anti-tumor responses in human cancers.″Immunological reviews 271.1(2016):260-275)。所有三篇公开文献的全部内容均通过引用并入本文。Figure 81: Expression levels of LTta/b and Cxcr5 and its ligand Cxcl13. These markers are crucial for the development of lymph nodes and tertiary lymphoid structures (Cyster, Jason G. "Blown away: the unexpected role of lymphotoxin in lymphoid organ development." The Journal of Immunology 192.5 (2014): 2007-2009, and Cupedo, Tom, et al. "Induction of secondary and tertiary lymphoid tissue"). Tertiary lymphoid structures in the skin (Immunity 21.5 (2004): 655-667) are key drivers of antitumor responses in humans (see Dieu-Nosjean, Marie-Caroline, et al. "Tertiary lymphoid structures, drivers of the antitumor responses in human cancers." Immunological reviews 271.1 (2016): 260-275). The full contents of all three published articles are incorporated herein by reference.
图82:不同肿瘤模型的TPP-14099处理组(显示为三角形)和同种型对照处理组(显示为圆圈)随时间推移的肿瘤生长(以mm3为单位)的蛛网图。根据相应大量肿瘤样本中的Cd8a mRNA水平判断的研究结束时的T细胞浸润水平用灰色阴影表示(黑色和浅灰色分别对应于最高和最低的Cd8a水平)。在H22和CT26中,肿瘤大小与Cd8a水平呈极好的反相关性。Figure 82: Spider plot of tumor growth (in mm3) over time for the TPP-14099 treatment group (shown as triangles) and the isotype control group (shown as circles) in different tumor models. T cell infiltration levels at the end of the study, determined by Cd8a mRNA levels in a large number of tumor samples, are represented by gray shading (black and light gray correspond to the highest and lowest Cd8a levels, respectively). In H22 and CT26, tumor size showed a very strong inverse correlation with Cd8a levels.
图83:根据不同免疫细胞标志物的mRNA水平判断的不同免疫细胞群对肿瘤的浸润与肿瘤大小之间的相关性。TPP-14099处理的肿瘤显示为三角形,同种型处理的肿瘤显示为圆圈。肿瘤大小以mm3为单位测量。细胞毒性T细胞浸润(根据Cd8a+Cd8b1 mRNA水平判断)与CT26肿瘤大小之间呈强负相关。与对照组相比,TPP-14099处理的肿瘤体积更小,并且显示出更高的Cd8a+Cd8b1 T细胞浸润水平,表明TPP-14099处理后增加的T细胞浸润导致肿瘤生长减少。在TPP-14099治疗的肿瘤中,T细胞浸润(通过Cd3 mRNA水平测量)与CT26肿瘤大小之间存在强负相关。TPP-14099处理的肿瘤体积更小,T细胞浸润水平更高,即Cd3 mRNA水平越高,肿瘤越小。NK细胞浸润(通过NK标志物Ncr1表达判断)与CT26肿瘤大小呈负相关。TPP-14099处理的肿瘤体积更小并显示更高的NK细胞浸润。肿瘤大小与NK浸润呈强烈负相关,NK水平越高,肿瘤越小。在TPP-14099处理的肿瘤中,根据Lta/Ltb/Cxcr5和Cxcl13mRNA水平判断的假定诱导三级淋巴结构与CT26肿瘤大小之间的相关性。对于四种标志物中的每一种,TPP-14099处理后其水平均显著增加,并且肿瘤大小与表达水平呈强烈负相关,表明TPP-14099处理后三级淋巴结构的形成增加导致肿瘤生长减少。Figure 83: Correlation between tumor invasion and tumor size of different immune cell populations as determined by mRNA levels of different immune cell markers. Tumors treated with TPP-14099 are shown as triangles, and tumors treated with the same type are shown as circles. Tumor size is measured in mm3. Cytotoxic T cell infiltration (determined by Cd8a+Cd8b1 mRNA levels) was strongly negatively correlated with CT26 tumor size. Compared with the control group, TPP-14099-treated tumors were smaller and showed higher levels of Cd8a+Cd8b1 T cell infiltration, indicating that the increased T cell infiltration after TPP-14099 treatment led to reduced tumor growth. In TPP-14099-treated tumors, there was a strong negative correlation between T cell infiltration (measured by Cd3 mRNA levels) and CT26 tumor size. TPP-14099-treated tumors were smaller and had higher levels of T cell infiltration, i.e., higher Cd3 mRNA levels were associated with smaller tumors. NK cell infiltration (assessed by the expression of the NK marker Ncr1) was negatively correlated with CT26 tumor size. TPP-14099-treated tumors were smaller and showed higher NK cell infiltration. Tumor size was strongly negatively correlated with NK infiltration; higher NK levels were associated with smaller tumors. In TPP-14099-treated tumors, the correlation between the hypothetical induced tertiary lymphoid structures and CT26 tumor size was assessed based on Lta/Ltb/Cxcr5 and Cxcl13 mRNA levels. For each of the four markers, TPP-14099 treatment significantly increased their levels, and tumor size was strongly negatively correlated with expression levels, indicating that increased tertiary lymphoid structure formation after TPP-14099 treatment led to reduced tumor growth.
图84:通过Cd8a mRNA表达判断的Cd8a浸润水平与TPP-14099处理的肿瘤(显示为三角形)和同种型处理的对照组(显示为圆圈)中不同肿瘤模型的肿瘤大小之间的相关性。TPP-1409处理的肿瘤体积更小,Cd8a浸润水平更高。肿瘤大小与Cd8a浸润呈强烈负相关,Cd8a水平越高,肿瘤越小。Figure 84: Correlation between Cd8a infiltration level (as determined by Cd8a mRNA expression) and tumor size in different tumor models from TPP-14099-treated tumors (shown as triangles) and isotype-treated control groups (shown as circles). TPP-1409-treated tumors were smaller and had higher Cd8a infiltration levels. Tumor size was strongly negatively correlated with Cd8a infiltration; higher Cd8a levels were associated with smaller tumors.
图85:CCR8抗体TPP-15285在用四种不同处理方案处理的EMT6肿瘤小鼠中的功效:单次治疗、两次BIW治疗、三次BIW治疗或四次BIW治疗。每组用载剂对照或0.1mg/kg、1mg/kg或5mg/kg的TPP-15285治疗。Figure 85: Efficacy of CCR8 antibody TPP-15285 in EMT6 tumor mice treated with four different regimens: single treatment, two BIW treatments, three BIW treatments, or four BIW treatments. Each group was treated with either a load-controlled regimen or TPP-15285 at doses of 0.1 mg/kg, 1 mg/kg, or 5 mg/kg.
图86:如表12.6.9.1所示,在MBT2同基因肿瘤荷瘤小鼠中单独或组合测试的本发明抗CCR8抗体、抗PD-1抗体、抗PD-L1抗体或紫杉醇的治疗效果。Figure 86: As shown in Table 12.6.9.1, the therapeutic effects of the present invention's anti-CCR8 antibody, anti-PD-1 antibody, anti-PD-L1 antibody, or paclitaxel, tested alone or in combination, in MBT2 syngeneic tumor-bearing mice.
图87:在白喉毒素处理的DTR小鼠中CD8a+表达的定量耗竭后本发明的抗CCR8抗体的治疗功效。耗竭Cd8+T细胞消除TPP15825的抗肿瘤生长作用(参见02b组v.01b组)。Figure 87: The therapeutic efficacy of the anti-CCR8 antibody of the present invention after quantitative depletion of CD8a+ expression in diphtheria toxin-treated DTR mice. Depletion of Cd8+ T cells eliminates the anti-tumor growth effect of TPP15825 (see group 02b v. 01b).
图88:在白喉毒素处理的DTR小鼠中CD19+表达定量耗竭后本发明的抗CCR8抗体的治疗功效。耗竭Cd19+B细胞增强TPP15825的抗肿瘤生长作用(参见02b组v.0 1b组)。Figure 88: The therapeutic efficacy of the anti-CCR8 antibody of the present invention after quantitative depletion of CD19+ expression in diphtheria toxin-treated DTR mice. Depletion of Cd19+ B cells enhances the anti-tumor growth effect of TPP15825 (see group 02b v. 01b).
图89:HUVEC细胞中各种本发明的抗CCR8抗体的内化曲线。具有已知内化特征的抗CD71抗体用作阳性对照。相应数据见表10.5.2。用根据本发明的方法获得的抗体均未显示显著内化,这使得它们对基于ADCC/ADCP的方法特别有用。Figure 89: Internalization curves of various anti-CCR8 antibodies of the present invention in HUVEC cells. Anti-CD71 antibodies with known internalization characteristics were used as positive controls. Corresponding data are shown in Table 10.5.2. The antibodies obtained using the method according to the present invention did not show significant internalization, making them particularly useful for ADCC/ADCP-based methods.
SEQ ID的简要说明Brief description of SEQ ID
通过电子归档随申请提供的序列列表的全部内容包含在本文中。SEQ ID NO:1至SEQ ID NO:108和SEQ ID NO:157至SEQ ID NO:168涉及可用作抗原或用于脱靶筛选的分离多肽。SEQ ID NO:109至SEQ ID NO:156涉及来自不同物种的趋化因子受体蛋白。SEQ IDNO:201至SEQ ID NO:965涉及本发明的抗体。硫酸化一栏仅为方便而提供,并不旨在以任何方式限制各自的序列。The full contents of the sequence list provided with the application via electronic archiving are included herein. SEQ ID NO: 1 to SEQ ID NO: 108 and SEQ ID NO: 157 to SEQ ID NO: 168 relate to isolated polypeptides that can be used as antigens or for off-target screening. SEQ ID NO: 109 to SEQ ID NO: 156 relate to chemokine receptor proteins from different species. SEQ ID NO: 201 to SEQ ID NO: 965 relate to antibodies of the present invention. The sulfation column is provided for convenience only and is not intended to limit the respective sequences in any way.
定义definition
除非另有定义,说明书、附图和权利要求中使用的所有科学和技术术语具有本领域普通技术人员通常理解的普通含义。本文中提及的所有出版物、专利申请、专利和其他参考文献的全部内容通过引用并入本文。如有冲突,应以本说明书(包括定义)为准。如果通过引用并入的两个或多个文件包含相互冲突和/或不一致的公开,则以生效日期较晚的文件为准。如果参考了数据库,则有效数据应为适用于2021年5月26日的版本号,除非另有说明。材料、方法和实施例仅是说明性的,并非旨在限制。除非另有说明,本文件中使用的以下术语,包括说明书和权利要求书,具有以下定义。Unless otherwise defined, all scientific and technical terms used in the specification, drawings, and claims have their ordinary meanings as commonly understood by one of ordinary skill in the art. The entire contents of all publications, patent applications, patents, and other references mentioned herein are incorporated herein by reference. In case of conflict, this specification (including definitions) shall prevail. If two or more documents incorporated by reference contain conflicting and/or inconsistent disclosures, the document with the later effective date shall prevail. If databases are referenced, the valid data should be the version number applicable to May 26, 2021, unless otherwise stated. Materials, methods, and examples are illustrative only and are not intended to be limiting. Unless otherwise stated, the following terms used in this document, including those in the specification and claims, have the following definitions.
此处使用的表达式“约”或“~”是指本领域普通技术人员确定的特定值的可接受误差范围内的值,这将部分取决于如何测量或确定该值,即取决于测量系统的限制。例如,根据本领域的实践,“约”可以表示在1个或1个以上的标准偏差内。术语“约”也用于表示所讨论的量或值可以是指定的值或近似相同的其他值。该短语旨在传达类似的值促进如本文所述的等同结果或效果。在这种情况下,“约”可以指高于和/或低于至多10%的范围。无论何时为某一测定或实施方式指定术语“约”,该定义均适用于特定上下文。The expressions “about” or “~” used herein refer to a value within an acceptable range of error for a particular value as determined by one of ordinary skill in the art, which will depend in part on how the value is measured or determined, i.e., on the limitations of the measurement system. For example, according to practice in the art, “about” can mean within one or more standard deviations. The term “about” is also used to indicate that the quantity or value in question can be a specified value or other values that are approximately the same. The phrase is intended to convey that similar values promote equivalent results or effects as described herein. In this case, “about” can refer to a range higher and/or lower than by up to 10%. Whenever the term “about” is specified for a particular measurement or implementation method, this definition applies to the specific context.
术语“包括”、“包含”、“含有”、“具有”等应扩展或开放式地阅读。当在说明书中使用时,术语“包括”包括“由…组成”。The terms “comprising,” “including,” “containing,” “having,” etc., should be read in an expanded or open-ended manner. When used in a specification, the term “comprising” includes “consisting of.”
单数形式如“一个/一种(a/an)”或“所述/该(the)”包括复数引用,除非上下文另有明确说明。因此,例如,提及“单克隆抗体”包括单一单克隆抗体以及多种相同或不同的单克隆抗体。同样,“细胞”包括单一细胞和多种细胞。Singular forms such as "a/an" or "the" include plural references unless the context clearly indicates otherwise. Thus, for example, a reference to "monoclonal antibody" includes a single monoclonal antibody as well as multiple identical or different monoclonal antibodies. Similarly, "cell" includes a single cell as well as multiple cell types.
除非另有说明,否则一系列元素之前的术语“至少”应理解为指向该系列中的每个元素。术语“至少一种”和“至少其中一种”包括例如一种、两种、三种、四种、五种或更多种元素。Unless otherwise stated, the term "at least" preceding a series of elements should be understood to refer to each element in the series. The terms "at least one" and "at least one of" include, for example, one, two, three, four, five, or more elements.
还应理解,高于和低于规定范围的轻微变化可用于实现与该范围内的值基本相同的结果。此外,除非另有指示,否则范围的公开旨在作为包括最小值和最大值之间的每个值的连续范围。It should also be understood that slight variations above and below the specified range can be used to achieve substantially the same results as values within that range. Furthermore, unless otherwise indicated, the range is intended to be a continuous range including every value between the minimum and maximum values.
本文中使用的术语“氨基酸”或“氨基酸残基”通常指天然存在的氨基酸。这里使用一个字母的代码来指代相应的氨基酸。如本文所用,“带电氨基酸”是带负电或带正电的氨基酸。“带负电荷的氨基酸”是天冬氨酸(D)和谷氨酸(E)。“带正电荷的氨基酸”是精氨酸(R)、赖氨酸(K)和组氨酸(H)。“极性氨基酸”是所有作为供体或受体形成氢键的氨基酸。这些都是带电荷的氨基酸和天冬酰胺(N)、谷氨酰胺(Q)、丝氨酸(S)、苏氨酸(T)、酪氨酸(Y)和半胱氨酸(C)。“极性不带电氨基酸”是天冬酰胺(N)、谷氨酰胺(Q)、丝氨酸(S)、苏氨酸(T)、酪氨酸(Y)和半胱氨酸(C)。“两基氨基酸”是色氨酸(W)、酪氨酸(Y)和蛋氨酸(M)。“芳香氨基酸”是苯丙氨酸(F)、酪氨酸(Y)和色氨酸(W)。“疏水性氨基酸”是甘氨酸(G)、丙氨酸(A)、缬氨酸(V)、亮氨酸(L)、异亮氨酸(I)、脯氨酸(P)、苯丙氨酸(F)、蛋氨酸(M)和半胱氨酸。“小氨基酸”是甘氨酸(G)、丙氨酸(A)、丝氨酸(S)、脯氨酸(P)、苏氨酸(T)、天冬氨酸(D)和天冬酰胺(N)。The term "amino acid" or "amino acid residue" as used in this article generally refers to naturally occurring amino acids. One-letter codes are used to denote the corresponding amino acids. As used herein, "charged amino acids" are amino acids that are either negatively or positively charged. "Negatively charged amino acids" are aspartic acid (D) and glutamic acid (E). "Positively charged amino acids" are arginine (R), lysine (K), and histidine (H). "Polar amino acids" are all amino acids that form hydrogen bonds as donors or acceptors. These are charged amino acids and asparagine (N), glutamine (Q), serine (S), threonine (T), tyrosine (Y), and cysteine (C). "Polarly uncharged amino acids" are asparagine (N), glutamine (Q), serine (S), threonine (T), tyrosine (Y), and cysteine (C). "Dibasic amino acids" are tryptophan (W), tyrosine (Y), and methionine (M). "Aromatic amino acids" are phenylalanine (F), tyrosine (Y), and tryptophan (W). The "hydrophobic amino acids" are glycine (G), alanine (A), valine (V), leucine (L), isoleucine (I), proline (P), phenylalanine (F), methionine (M), and cysteine. The "small amino acids" are glycine (G), alanine (A), serine (S), proline (P), threonine (T), aspartic acid (D), and asparagine (N).
如本文所用,术语“肽”、“多肽”和“蛋白质”可互换使用,并指由肽键共价连接的氨基酸残基组成的化合物。一种蛋白质或肽必须至少包含两个氨基酸,并且对氨基酸的最大数量没有限制。多肽包括包含通过肽键彼此连接的两个或更多个氨基酸的任何肽或蛋白质。如本文所使用的,该术语既指短链(其在本领域中也通常被称为例如肽、寡肽和低聚物),又指长链,长链通常在本领域被称为蛋白质,具有多种类型。“多肽”包括,例如,生物活性片段、基本同源多肽、寡肽、同源二聚体、异二聚体,多肽变体、修饰多肽、衍生物、类似物、融合蛋白等。多肽包括天然肽、重组肽、合成肽或其组合。As used herein, the terms “peptide,” “polypeptide,” and “protein” are used interchangeably and refer to compounds composed of amino acid residues covalently linked by peptide bonds. A protein or peptide must contain at least two amino acids, and there is no limit to the maximum number of amino acids. Polypeptides include any peptide or protein containing two or more amino acids linked together by peptide bonds. As used herein, the term refers both to short chains (which are also commonly referred to in the art as, for example, peptides, oligopeptides, and oligomers) and long chains, which are commonly referred to in the art as proteins and come in many types. “Polypeptide” includes, for example, bioactive fragments, basic homologous peptides, oligopeptides, homodimers, heterodimers, peptide variants, modified peptides, derivatives, analogs, fusion proteins, etc. Polypeptides include natural peptides, recombinant peptides, synthetic peptides, or combinations thereof.
如果对某一物种(如小鼠)的基因或蛋白质进行了一般性引用,则除非另有说明或明显不兼容,否则同样应指人类的类似物。这尤其适用于生物标志物。When a gene or protein of a species (such as a mouse) is generally referenced, it should also refer to a human analogue unless otherwise stated or clearly incompatible. This is especially true for biomarkers.
当应用于核酸、多肽、蛋白质或抗体时,术语“分离的”表示该核酸、多肽或蛋白质或抗体基本上不含在自然状态下与其相关的其他细胞成分。它优选处于均匀状态。它可以是干溶液或水溶液。纯度和均一性通常使用聚丙烯酰胺凝胶电泳或高效液相色谱等分析化学技术来确定。作为制剂中存在的主要物质的蛋白质、多肽或抗体被实质上纯化。特别是,分离的基因与基因侧翼并编码感兴趣基因以外的蛋白质的开放阅读框分离。然而,分离的多肽可以例如通过合适的接头固定在珠或颗粒上。When applied to nucleic acids, peptides, proteins, or antibodies, the term "isolated" means that the nucleic acid, peptide, protein, or antibody is substantially free of other cellular components associated with it in their natural state. It is preferably in a homogeneous state. It can be a dry solution or an aqueous solution. Purity and homogeneity are typically determined using analytical chemistry techniques such as polyacrylamide gel electrophoresis or high-performance liquid chromatography. The protein, peptide, or antibody, as the main substance present in the formulation, is substantially purified. In particular, isolated genes are separated from open reading frames flanking the gene and encoding proteins other than the gene of interest. However, isolated peptides can be immobilized on beads or particles, for example, using suitable adapters.
术语“纯化”表示核酸或蛋白质在电泳凝胶中基本上产生一条带。特别地,这意味着核酸或蛋白质是至少85%纯度,更优选地至少95%纯度,最优选地至少99%纯度。The term "purification" means that nucleic acids or proteins essentially produce a single band in an electrophoresis gel. Specifically, this means that the nucleic acids or proteins are at least 85% pure, more preferably at least 95% pure, and most preferably at least 99% pure.
如本文所使用的,术语“合成”,例如合成核酸分子或合成基因或合成肽是指通过重组方法和/或化学合成方法产生的核酸分子或多肽分子。如本文所使用的,通过使用重组DNA方法的重组手段生产意味着使用众所周知的分子生物学方法来表达由克隆DNA编码的蛋白质。As used herein, the term "synthesis," such as synthetic nucleic acid molecules, synthetic genes, or synthetic peptides, refers to nucleic acid or polypeptide molecules produced through recombinant and/or chemical synthesis methods. As used herein, recombinant production using recombinant DNA methods means expressing proteins encoded by cloned DNA using well-known molecular biology methods.
“翻译后修饰”(PTM)是指肽或蛋白质的共价修饰,这些修饰是在自然条件下蛋白质生物合成后引入的。该术语包括但不限于糖基化、磷酸化、酰化、腺嘌呤化、法尼酰化、泛素化和硫酸化。翻译后修饰可能影响肽或蛋白质的活性。2004年,Gutiérrez等描述了小鼠CCR8趋化因子受体的硫酸化和糖基化状态,以及这些翻译后修饰影响CCR8活性的方式。他们认为,小鼠CCR8第14和15位的酪氨酸是硫酸化的氨基酸残基,而天冬酰胺8和苏氨酸10和12被糖基化的。此外,他们表明,硫酸化对CCR8的活性很重要(Gutiarrez,Julio,et al.″Analysis of post-translational CCR8 modifications and their influence onreceptor activity.″Journal of Biological Chemistry 279.15(2004):14726-14733)。Post-translational modifications (PTMs) refer to covalent modifications of peptides or proteins that are introduced after protein biosynthesis under natural conditions. This term includes, but is not limited to, glycosylation, phosphorylation, acylation, adenineization, farnesylation, ubiquitination, and sulfation. Post-translational modifications can affect the activity of peptides or proteins. In 2004, Gutiérrez et al. described the sulfation and glycosylation status of the mouse CCR8 chemokine receptor and how these post-translational modifications affect CCR8 activity. They suggested that tyrosine residues at positions 14 and 15 of mouse CCR8 are sulfated amino acid residues, while asparagine 8 and threonine residues at positions 10 and 12 are glycosylated. Furthermore, they showed that sulfation is important for the activity of CCR8 (Gutiarrez, Julio, et al. "Analysis of post-translational CCR8 modifications and their influence on receptor activity." Journal of Biological Chemistry 279.15 (2004): 14726-14733).
“硫酸化”是一种翻译后修饰,其中硫酸基团被添加到氨基酸中,如多肽或蛋白质的酪氨酸残基。酪氨酸硫酸化发生在所有多细胞生物中。在生理条件下,它由酪氨酸蛋白硫转移酶(TPSTs)1和2催化,这是将硫酸盐从辅因子PAPS(3′-磷酸腺苷5′-磷酸硫酸盐)转移到蛋白质底物中的环境依赖性酪氨酸的高尔基体驻留酶。酪氨酸的合成硫酸化可以用本领域已知的技术进行,例如Bunschoten,Anton,et al.″A general sequence independentsolid phase method for the site specific synthesis of multiple sulfated-tyrosine containing peptides.″Chemical Communications 21(2009):2999-3001所描述。硫酸化多肽是包含至少一种硫酸化的多肽。非硫酸化多肽是不含硫酸化的多肽。"Sulfation" is a post-translational modification in which a sulfate group is added to a tyrosine residue of an amino acid, such as a polypeptide or protein. Tyrosine sulfation occurs in all multicellular organisms. Under physiological conditions, it is catalyzed by tyrosine protein sulfur transferases (TPSTs) 1 and 2, which are Golgi-resident enzymes that transfer sulfate from the cofactor PAPS (3′-phosphoadenosine 5′-phosphate sulfate) to the protein substrate. Synthetic sulfation of tyrosine can be performed using techniques known in the art, such as those described in Bunschoten, Anton, et al. "A general sequence-dependent solid phase method for the site-specific synthesis of multiple sulfated-tyrosine containing peptides." Chemical Communications 21 (2009): 2999-3001. A sulfated polypeptide is a polypeptide containing at least one sulfate group. A non-sulfated polypeptide is a polypeptide that does not contain a sulfate group.
“富含酪氨酸的结构域”(TRD)是一个保守的结构域,它表征了七次跨膜蛋白,例如CXC和CC趋化因子受体。TRD通常位于趋化因子受体的N端,并且通常通过半胱氨酸连接到LID结构域,参见图2b。因此,如本文所用,术语TRD是指CXC或CC趋化因子的氨基酸或蛋白质序列,其位于从N端计数的第一个半胱氨酸的N端。TRD可以或可以不包括信号肽。TRD可以修改,也可以不修改。除酪氨酸外,TRD通常包含带负电的氨基酸残基,如天冬氨酸。TRD被认为是趋化因子受体与其内源性配体相互作用的重要结构。在生理条件下,TRD中的酪氨酸残基可以硫酸化、非硫酸化或部分硫酸化。表4.1中提供了相应趋化因子受体TRD的特定序列。然而,很明显,在TRD序列中可以引入突变,而不会改变整体电荷和相互作用模式。优选地,根据表4.1,TRD与至少一个TRD序列具有至少90%、95%或99%的序列同一性或序列相似性。The tyrosine-rich domain (TRD) is a conserved domain that characterizes seven-transmembrane proteins, such as CXC and CC chemokine receptors. The TRD is typically located at the N-terminus of the chemokine receptor and is usually linked to the LID domain via a cysteine residue (see Figure 2b). Therefore, as used herein, the term TRD refers to the amino acid or protein sequence of the CXC or CC chemokine located at the N-terminus of the first cysteine residue counted from the N-terminus. The TRD may or may not include a signal peptide. The TRD may be modified or left unmodified. In addition to tyrosine residues, the TRD typically contains negatively charged amino acid residues, such as aspartic acid. The TRD is considered an important structure for the interaction of chemokine receptors with their endogenous ligands. Under physiological conditions, the tyrosine residues in the TRD can be sulfated, unsulfated, or partially sulfated. Specific sequences of the corresponding chemokine receptor TRDs are provided in Table 4.1. However, it is clear that mutations can be introduced into the TRD sequence without altering the overall charge and interaction patterns. Preferably, according to Table 4.1, the TRD has at least 90%, 95%, or 99% sequence identity or sequence similarity with at least one TRD sequence.
本文所用的趋化因子受体的术语“N末端/N端”是指至少包含TRD的趋化因子受体的N端氨基酸。当多肽或蛋白质包含信号肽时,N端也可以指多肽或蛋白质的天然切割位点后面的N端序列。根据一些优选实施方式,N端包含趋化因子受体的LID结构域和TRD结构域,但不包含这两个结构域之间的天然半胱氨酸。相反,半胱氨酸可以被去除或被不同的氨基酸取代。As used herein, the term "N-terminus/N-terminus" for chemokine receptors refers to the N-terminal amino acid of a chemokine receptor that contains at least the TRD domain. When the peptide or protein contains a signal peptide, the N-terminus may also refer to the N-terminal sequence following the native cleavage site of the peptide or protein. According to some preferred embodiments, the N-terminus contains both the LID and TRD domains of the chemokine receptor, but excluding the native cysteine residue between these two domains. Instead, the cysteine residue may be removed or substituted with a different amino acid.
本文所用的趋化因子受体的“LID”结构域是指位于趋化因子受体TRD的C端的氨基酸序列。TRD和LID结构域通常由单个半胱氨酸分隔。The "LID" domain of the chemokine receptor used in this article refers to the amino acid sequence located at the C-terminus of the chemokine receptor TRD. The TRD and LID domains are usually separated by a single cysteine residue.
“序列同一性”或“百分比同一性”是一个数字,描述查询序列与目标序列的相似程度,更准确地说,每个序列中有多少字符在比对后是相同的。计算序列同一性的最流行的工具是BLAST(基本局部比对搜索工具,https://blast.ncbi.nlm.nih.gov/),其执行序列对之间的比较,搜索局部相似性区域。合适的比对方法是本领域已知的,例如用于全局比对的Needleman-Wunsch算法,其使用BLOSUM62矩阵,缺口开放惩罚为11,缺口扩展惩罚为1,可以对比对的相同残基对进行计数,然后除以比对的总长度(包括内部和外部的缺口),得出同一性百分比值。"Sequence identity" or "percentage identity" is a number describing the similarity between a query sequence and a target sequence; more precisely, it's how many characters in each sequence are identical after alignment. The most popular tool for calculating sequence identity is BLAST (Basic Local Alignment Search Tool, https://blast.ncbi.nlm.nih.gov/), which performs comparisons between sequence pairs, searching for locally similar regions. Suitable alignment methods are known in the art, such as the Needleman-Wunsch algorithm for global alignment, which uses a BLOSUM62 matrix with a gap opening penalty of 11 and a gap expansion penalty of 1. It counts identical residue pairs in the alignment and then divides by the total length of the alignment (including internal and external gaps) to obtain the identity percentage value.
对于“百分比相似性”或“序列相似性”值,可以使用与百分比同一性值相同的方法,除了计算的是具有非负值的BLOSUM62值的比对残基对,而不是相同残基对(即≥0)。For “percentage similarity” or “sequence similarity” values, the same method as for percentage identity values can be used, except that the aligned residue pairs are calculated with non-negative BLOSUM62 values, instead of identical residue pairs (i.e., ≥0).
“七次跨膜受体”(7-TM受体)是包含七次跨膜螺旋的完整膜蛋白。如本文所用,7-TM受体是G蛋白偶联受体。The "seven-transmembrane receptor" (7-TM receptor) is a complete membrane protein containing seven transmembrane helices. As used in this article, the 7-TM receptor is a G protein-coupled receptor.
“趋化因子受体”是七次跨膜受体。趋化因子受体家族在人类中包含24个成员,根据它们结合的趋化因子的种类,可以细分为四个亚家族:CX3CR、CXCR、CCR和XCR,它们都激活G蛋白,ACKR包含6个非典型受体,在配体结合时不能激活G蛋白。"Chemokine receptors" are seven-transmembrane receptors. The chemokine receptor family in humans contains 24 members, which can be further divided into four subfamilies based on the types of chemokines they bind: CX3CR, CXCR, CCR, and XCR. They all activate G proteins. ACKR contains six atypical receptors that do not activate G proteins upon ligand binding.
“CXC趋化因子受体”(CXCR)是一种特异性结合并响应CXC趋化因子家族的细胞因子的完整的膜蛋白。它们代表趋化因子受体的一个亚家族,因为跨越细胞膜七次被称为七次跨膜(7-TM)蛋白的G蛋白连接受体的大家族。目前,哺乳动物中已知有七种CXC趋化因子受体,分别命名为CXCR1、CXCR2、CXCR3、CXCR4、CXCR5和CXCR6。CXCR6在结构上与CC趋化因子受体比与其他CXC趋化因子受体更密切相关。CXC chemokine receptors (CXCRs) are intact membrane proteins that specifically bind to and respond to CXC chemokine family cytokines. They represent a subfamily of chemokine receptors because they cross the cell membrane seven times, forming a larger family of G protein-linked receptors known as seven-transmembrane (7-TM) proteins. Currently, seven CXC chemokine receptors are known in mammals, named CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, and CXCR6. CXCR6 is structurally more closely related to CC chemokine receptors than to other CXC chemokine receptors.
“CC趋化因子受体”(CCR,也称为β趋化因子受体)是一种特异性结合并响应CC趋化因子家族的细胞因子的完整的膜蛋白。它们代表趋化因子受体的一个亚家族,因为跨越细胞膜七次被称为七次跨膜(7-TM)蛋白的G蛋白连接受体的大家族。CC趋化因子受体的亚家族包括CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9和CCR1 0。"CC chemokine receptors" (CCRs, also known as β-chemokine receptors) are intact membrane proteins that specifically bind to and respond to cytokines of the CC chemokine family. They represent a subfamily of chemokine receptors because they are a large family of G protein receptors that cross the cell membrane seven times, and are called seven-transmembrane (7-TM) proteins. The CC chemokine receptor subfamily includes CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, and CCR10.
术语“CCR8”是指C-C趋化因子受体类型8。CCR8蛋白由基因CCR8(NCBI基因ID1237)编码。CCR8的同义词尤其是CC-CKR-8、CCR-8、CDw198、CKRL1、CMKBR8、CMKBRL2、GPRCY6、CY6、TER1。CCR8蛋白包括人、鼠、大鼠、恒河猴以及其他哺乳动物和非哺乳动物同源物。人类CCR8的序列可通过UniProt标识符P51685(CCR8_human)访问,例如人类同种型P51685-1或P51685-2(UniProt,2019年11月29日)。鼠CCR8的序列可通过UniProt标识符P56484(CCR8_MOUSE)访问。恒河猴CCR8的序列可通过UniProt标识符O97665(CCR8_MACMU)访问。不同物种可能存在不同的同种型和变体,并且都由术语CCR8组成。也包括成熟前后的CCR8分子,即独立于一个或多个前结构域的切割。此外,可以产生CCR8蛋白的合成变体,并被术语CCR8包含。此外,CCR8蛋白质可以进行各种修饰,例如,合成或天然发生的修饰,例如翻译后修饰。重组人CCR8可商购或可如本领域已知的那样制造。CCR8是趋化因子CCL1/SCJA1/I-309的受体。Barington等报道了细胞外环2(ECL-2)中保守的胞外二硫桥和芳香残基对于趋化因子受体CCR8中配体结合和激活的重要性(Barington,Line,et al.″Role ofconserved disulfide bridges and aromatic residues in extracellular loop 2 ofchemokine receptor CCR8 for chemokine and small molecule binding.″Journal ofBiological Chemistry 291.31(2016):16208-16220)。此外,他们发现ECL-2中的两个不同的芳香族残基,Tyr184(Cys+1)和Tyr187(Cys+4),分别对CC趋化因子CCL1(激动剂)和MC148(拮抗剂)的结合至关重要,但对小分子的结合不重要。The term "CCR8" refers to C-C chemokine receptor type 8. The CCR8 protein is encoded by the gene CCR8 (NCBI gene ID 1237). Synonyms for CCR8 include CC-CKR-8, CCR-8, CDw198, CKRL1, CMKBR8, CMKBRL2, GPRCY6, CY6, and TER1. CCR8 proteins include human, mouse, rat, rhesus monkey, and other mammalian and non-mammal homologs. The human CCR8 sequence is accessible via the UniProt identifier P51685 (CCR8_human), for example, human isotypes P51685-1 or P51685-2 (UniProt, November 29, 2019). The mouse CCR8 sequence is accessible via the UniProt identifier P56484 (CCR8_MOUSE). The rhesus monkey CCR8 sequence is accessible via the UniProt identifier O97665 (CCR8_MACMU). Different species may have different isotypes and variants, all of which are composed of the term CCR8. This also includes pre- and post-maturation CCR8 molecules, i.e., cleavage independent of one or more pre-domains. Furthermore, synthetic variants of the CCR8 protein can be generated and are included in the term CCR8. In addition, the CCR8 protein can undergo various modifications, such as synthetic or naturally occurring modifications, including post-translational modifications. Recombinant human CCR8 is commercially available or can be manufactured as is known in the art. CCR8 is a receptor for the chemokine CCL1/SCJA1/I-309. Barington et al. reported the importance of conserved extracellular disulfide bridges and aromatic residues in extracellular loop 2 (ECL-2) for ligand binding and activation in the chemokine receptor CCR8 (Barington, Line, et al. "Role of conserved disulfide bridges and aromatic residues in extracellular loop 2 of chemokine receptor CCR8 for chemokine and small molecule binding." Journal of Biological Chemistry 291.31(2016): 16208-16220). Furthermore, they found that two distinct aromatic residues in ECL-2, Tyr184 (Cys+1) and Tyr187 (Cys+4), are crucial for the binding of CC chemokines CCL1 (agonist) and MC148 (antagonist), respectively, but are not important for the binding of small molecules.
“程序性死亡-1(PD-1)”是指属于CD28家族的免疫抑制受体。PD-1主要在体内先前激活的T细胞上表达,并与两种配体PD-L1和PD-L2结合。本文中使用的术语“PD-1”包括但不限于人PD-1(hPD-1)、hPD-1的变体、同种型和物种同源物,以及与hPD-1具有至少一个共同表位的类似物。完整的hPD-1序列可在GenBank登录号U64863(2019年11月29日)中找到。Programmed death-1 (PD-1) refers to an immunosuppressive receptor belonging to the CD28 family. PD-1 is primarily expressed on previously activated T cells in vivo and binds to two ligands, PD-L1 and PD-L2. As used herein, the term "PD-1" includes, but is not limited to, human PD-1 (hPD-1), variants, isotypes, and species homologs of hPD-1, as well as analogs sharing at least one common epitope with hPD-1. The complete hPD-1 sequence is available in GenBank accession number U64863 (November 29, 2019).
“程序性死亡配体-1(PD-L1)”是PD-1的两种细胞表面糖蛋白配体之一(另一种是PD-L2),其在与PD-1结合时下调T细胞激活和细胞因子分泌。本文中使用的术语“PD-L1”包括但不限于人PD-L1(hPDL1)、hPD-L1的变体、同种型和物种同源物,以及与hPD-L1具有至少一个共同表位的类似物。完整的hPD-L1序列可以在GenBank登录号Q9NZQ7(2019年11月29日)中找到。Programmed death-ligand-1 (PD-L1) is one of two cell surface glycoprotein ligands of PD-1 (the other being PD-L2), which downregulates T cell activation and cytokine secretion upon binding to PD-1. As used herein, the term "PD-L1" includes, but is not limited to, human PD-L1 (hPD-L1), variants, isotypes, and species homologs of hPD-L1, as well as analogs sharing at least one common epitope with hPD-L1. The complete hPD-L1 sequence can be found in GenBank accession number Q9NZQ7 (November 29, 2019).
“肿瘤比例评分”(TPS)是在任何强度下显示部分或完全膜染色的活肿瘤细胞的百分比。例如,如果TPS≥1%,则应认为样本具有PD-L1表达;如果TPS≥50%,则应认为样本具有高PDL1表达。例如,NSCLC中的PD-L1蛋白表达通常通过使用肿瘤比例评分(TPS)来确定。Tumor proportion score (TPS) is the percentage of live tumor cells that show partial or complete membrane staining at any intensity. For example, if TPS ≥ 1%, the sample should be considered to have PD-L1 expression; if TPS ≥ 50%, the sample should be considered to have high PD-L1 expression. For example, PD-L1 protein expression in NSCLC is often determined using tumor proportion score (TPS).
“组合阳性分数”(CPS)是指染色细胞(肿瘤细胞、淋巴细胞、巨噬细胞)的数量除以活肿瘤细胞总数,乘以100。例如,如果CPS≥1,则样本应被视为具有PD-L1表达;如果CPS≥10,则样本应被视为具有高PD-L1表达。FDA已批准使用PD-L1 IHC 22C3pharmDx测定来确定患者的治疗性抗体pembrolizumab的适用性。The "combined positive score" (CPS) is calculated by dividing the number of stained cells (tumor cells, lymphocytes, macrophages) by the total number of viable tumor cells, multiplied by 100. For example, if CPS ≥ 1, the sample should be considered to have PD-L1 expression; if CPS ≥ 10, the sample should be considered to have high PD-L1 expression. The FDA has approved the use of the PD-L1 IHC 22C3pharmDx assay to determine the suitability of the therapeutic antibody pembrolizumab in patients.
“FOXP3”是一种50-55kD的转录因子,也称为Forkhead box蛋白P3、Scurfin、JM2或IPEX。与大多数细胞表面标志物相比,它被认为是调节性T细胞的主调节基因和更特异的标志物。FOXP3在CD4+/CD25-细胞中的转导表达已被证明可诱导GITR、CD103和CTLA4,并赋予调节性T细胞表型。Biolegend抗体克隆206D和259D识别氨基酸105-235区域中的人FOXP3表位。Poly6238识别人和小鼠FOXP3,并针对FOXP3的N端部分。FOXP3 is a 50-55 kDa transcription factor, also known as the Forkhead Box protein P3, Scurfin, JM2, or IPEX. Compared to most cell surface markers, it is considered a master regulatory gene and a more specific marker for regulatory T cells. Transduced expression of FOXP3 in CD4+/CD25- cells has been shown to induce GITR, CD103, and CTLA4, conferring a regulatory T cell phenotype. Biolegend antibody clones 206D and 259D recognize human FOXP3 epitopes in the amino acid 105-235 region. Poly6238 recognizes human and mouse FOXP3 and targets the N-terminal portion of FOXP3.
术语“调节”是指现有过程或行为的任何改变,如阻断(拮抗)和诱导(激动)。例如,G蛋白非依赖性信号传导的调节是指G蛋白非依赖性信号传导的任何显著改变。The term "regulation" refers to any alteration of an existing process or behavior, such as blocking (antagonism) and induction (excitation). For example, regulation of G protein-independent signaling refers to any significant change in G protein-independent signaling.
抗体、片段或缀合物的术语“内化”是指将抗体、片段和缀合物摄取到细胞中。优选地,确定具有内源性靶表达(例如本文别处所述的人或小鼠CCR8)的细胞系的内化。优选地,内化通过测量每个细胞的总内化荧光强度来确定,并相对于同种型对照进行量化,例如如实施例10.5所述。简而言之,用染料标记抗体、片段或偶联物和匹配的同种型对照,并且相对于同种型对照测定和定量抗体、片段或偶联物的内化荧光。“非内化抗体”定义为显示出与相应同种型对照基本相同的内化作用的抗体。“低内化抗体”定义为显示内化等于或低于同种型对照内化10倍,优选地低于同种型对照内化的9-、8-、7-、6-、5-、4-、3-、2-、1.5-、1.4-、1.3-、1.2-或1.1倍。“中等内化抗体”定义为显示等于或低于同种型对照内化的21倍并且高于同种型对照内化的10倍的内化的抗体。“高内化抗体”定义为高于同种型对照内化的21倍的内化的抗体。The term "internalization" for antibodies, fragments, or conjugates refers to the uptake of antibodies, fragments, and conjugates into cells. Preferably, internalization is determined in cell lines with endogenous target expression (e.g., human or mouse CCR8 as described elsewhere herein). Preferably, internalization is determined by measuring the total internalization fluorescence intensity per cell and quantifying it relative to an isotype control, for example as described in Example 10.5. In short, antibodies, fragments, or conjugates are labeled with a dye and a matched isotype control is used, and the internalization fluorescence of the antibody, fragment, or conjugate is measured and quantified relative to the isotype control. A "non-internalizing antibody" is defined as an antibody that exhibits substantially the same internalization as the corresponding isotype control. A "low-internalizing antibody" is defined as showing internalization equal to or less than 10-fold of the isotype control internalization, preferably 9, 8, 7, 6, 5, 4, 3, 2, 1.5, 1.4, 1.3, 1.2, or 1.1-fold less than the isotype control internalization. "Intermediate internalization antibody" is defined as an antibody that shows internalization equal to or less than 21 times that of the isotype control and more than 10 times that of the isotype control. "High internalization antibody" is defined as an antibody that shows internalization more than 21 times that of the isotype control.
在替代方式中,内化还可以基于t(1/2)进行量化,即直到抗体、片段或缀合物的一半量被内化的时间。优选地,根据本发明的抗体的特征在于直到抗体、片段或缀合物的一半量被内化的时间,该时间为>2小时,优选>4、>5、>6、>7、>8、>9、>10、>11、>12、>13、>14、>15、>16、>17、>18、>19、>20、>21、>22、>23、>24、>26、>28、>30或>48小时。最优选地,根据本发明的抗体根本不被内化,即在抗体、片段或缀合物的一半量被内化之前不能定义时间。In an alternative approach, internalization can also be quantified based on t(1/2), i.e., the time until half of the antibody, fragment, or conjugate is internalized. Preferably, the antibody according to the invention is characterized by a time until half of the antibody, fragment, or conjugate is internalized, which is >2 hours, preferably >4, >5, >6, >7, >8, >9, >10, >11, >12, >13, >14, >15, >16, >17, >18, >19, >20, >21, >22, >23, >24, >26, >28, >30, or >48 hours. Most preferably, the antibody according to the invention is not internalized at all, i.e., the time before half of the antibody, fragment, or conjugate is internalized cannot be defined.
“同种型对照”是一种抗体或片段,其不与靶标结合,但具有与识别靶标的参考抗体或片段相同的类别和类型。"Isotype control" is an antibody or fragment that does not bind to the target but has the same class and type as a reference antibody or fragment that recognizes the target.
如果抗体或片段结合来自两种或多种不同物种的抗原,例如KD值为10-7M或更低,更优选地小于10-8M,甚至更优选地在10-9M至10-11M的范围内,则抗体或片段被称为“交叉反应”或“交叉反应性”。If an antibody or fragment binds to antigens from two or more different species, for example, with a KD value of 10⁻⁷ M or less, more preferably less than 10⁻⁸ M, or even more preferably in the range of 10⁻⁹ M to 10⁻¹¹ M, then the antibody or fragment is referred to as “cross-reactive” or “cross-reactive”.
本文中所用的术语“特异性结合”是指识别特定抗原,但实质上不识别或结合样品中的其他分子的抗体:以实质性非特异性结合为特征的抗体将缺乏治疗适用性,因此这些实施方式被排除在外。然而,如本领域已知的,抗体或结合物的特异性结合不一定排除抗体或结合物与其他抗原/靶分子的结合。特异性结合来自一个物种的抗原的抗体也可以结合来自一个或多个其他物种的抗原。这种跨物种反应性本身不会改变抗体的特异性分类。As used herein, the term "specific binding" refers to an antibody that recognizes a specific antigen but does not substantially recognize or bind to other molecules in the sample: antibodies characterized by substantial nonspecific binding would lack therapeutic applicability, and therefore such implementations are excluded. However, as is known in the art, specific binding of an antibody or conjugate does not necessarily preclude binding to other antigens/target molecules. An antibody that specifically binds to an antigen from one species may also bind to antigens from one or more other species. This cross-species reactivity itself does not alter the antibody's specific classification.
在某些情况下,术语“特异性结合”或“特异性地结合”可用于指抗体、蛋白质或肽与第二种化学物质的相互作用,意味着相互作用取决于化学物质上特定结构(例如抗原决定簇或表位)的存在;例如,抗体识别并结合特定的蛋白质结构,而不是一般地结合蛋白质。如果抗体对表位“A”具有特异性,则在含有表位“A”和抗体的反应中,含有表位A的分子(或游离的、未标记的A)的存在将减少与抗体结合的标记A的量。In some contexts, the terms "specific binding" or "specifically binding" can be used to refer to the interaction of an antibody, protein, or peptide with a second chemical substance, meaning that the interaction depends on the presence of a specific structure on the chemical substance (e.g., an antigenic determinant or epitope); for example, the antibody recognizes and binds to a specific protein structure, rather than binding to the protein in general. If an antibody is specific for epitope "A," then in a reaction involving epitope "A" and an antibody, the presence of a molecule containing epitope A (or free, unlabeled A) will reduce the amount of labeled A that binds to the antibody.
在有疑问的情况下,抗体或结合物的特异性结合优选描述抗体、抗体片段或结合物以至少10-7M的亲和力(作为KD值;即优选KD值小于10-7M)与其抗原/靶标的结合,其中所述抗体或结合物对非特异性抗原具有至少两倍更低的亲和力,所述非特异性抗原不是预定的抗原/靶标分子或密切相关的抗原/靶标分子。In cases of doubt, the specific binding of an antibody or conjugate preferably describes the binding of the antibody, antibody fragment, or conjugate to its antigen/target with an affinity of at least 10⁻⁷ M (as a KD value; i.e., preferably a KD value less than 10⁻⁷ M), wherein the antibody or conjugate has at least twice the lower affinity for a nonspecific antigen that is not a predetermined antigen/target molecule or a closely related antigen/target molecule.
“多特异性”,也称为“多反应性”或“非特异性结合”,是指结合物或抗体结合一组确定的无关抗原的能力。如果抗体的(治疗)适用性受到损害,非特异性结合是实质性的。非蛋白质结构的多特异性,包括但不限于靶阴性细胞系或组织、杆状病毒颗粒(BVP)、胰岛素或DNA,可以如本领域已知的和本文所述进行评估。例如,可以例如通过使用模拟转染的CHO或HEK细胞的FACS分析来确定与靶阴性人细胞系的非特异性结合。在第二个实施例中,可以通过FACS分析衍生自相应组织的细胞系或细胞系组来分析与不同组织的非特异性结合。在第三个例子中,免疫细胞群体的非特异性结合可以在本领域已知的免疫细胞群体分类后通过FACS进行分析。在第四个例子中可以使用ELISA分析BVP、胰岛素或DNA的非特异性性结合,如IsidroIsidro,et al.″A strategy for risk mitigation ofantibodies with fast clearance.″MAbs.Vol.4.No.6.Taylor&Francis,2012.;Avery,Lindsay B.,et al.″Establishing in vitro in vivo correlations to screenmonoclonal antibodies forphysicochemical properties related to favorablehuman pharmacokinetics.″MAbs.Vol.10.No.2.Taylor&Francis,2018.,和Jain,Tushar,et al.″Biophysical properties of the clinical-stage antibody landscape.″Proceedings of the National Academy of Sciences 114.5(2017):944-949所述,其全部内容并入本文,特别是关于分析和量化非特异性结合所需的技术细节。没有实质上非特异性结合的抗体的特征优选地为非特异性结合低于参考抗体Gantenerumab(Roche)的非特异性结合并且最优选地低于参考抗体Remicade(Janssen Biotech)的非特性结合。"Multispecificity," also known as "multireactivity" or "nonspecific binding," refers to the ability of a conjugate or antibody to bind to a defined set of unrelated antigens. Nonspecific binding is substantial if the (therapeutic) suitability of the antibody is compromised. Multispecificity of non-protein structures, including but not limited to target-negative cell lines or tissues, baculovirus particles (BVP), insulin, or DNA, can be assessed as known in the art and described herein. For example, nonspecific binding to target-negative human cell lines can be determined, for instance, by using FACS analysis of simulated transfected CHO or HEK cells. In a second embodiment, nonspecific binding to different tissues can be analyzed by FACS analysis of cell lines or cell line groups derived from the respective tissues. In a third example, nonspecific binding to immune cell populations can be analyzed by FACS after classification of immune cell populations as known in the art. In the fourth example, ELISA can be used to analyze the non-specific binding of BVP, insulin, or DNA, as in Isidro, et al. "A strategy for risk mitigation of antibodies with fast clearance." MAbs. Vol. 4. No. 6. Taylor & Francis, 2012.; Avery, Lindsay B., et al. "Establishing in vivo correlations to screen monoclonal antibodies for physiological prophylaxis." The entire contents of the following are incorporated herein by reference, particularly regarding the technical details required for the analysis and quantification of nonspecific binding: "Properties related to favorable human pharmacokinetics." MAbs. Vol. 10. No. 2. Taylor & Francis, 2018., and Jain, Tushar, et al. "Biophysical properties of the clinical-stage antibody landscape." Proceedings of the National Academy of Sciences 114.5 (2017): 944-949. Antibodies that do not exhibit substantial nonspecific binding are preferably characterized by nonspecific binding lower than that of the reference antibody Gantenerumab (Roche) and most preferably lower than that of the reference antibody Remicade (Janssen Biotech).
术语“脱靶结合”是指抗体结合不同于预期靶标的单个蛋白的能力,例如靶标蛋白家族的蛋白。可使用本领域已知的商业测定(例如Retrogenix脱靶分析测定)来评估脱靶结合。简而言之,抗体是在含有单独表达数千种人膜蛋白和分泌蛋白的HEK293细胞的微阵列上测试的。抗体与潜在脱靶的结合必须使用过度表达潜在脱靶的细胞的FACS来确认。The term "off-target binding" refers to the ability of an antibody to bind to a single protein that is different from its intended target, such as a protein from a target protein family. Off-target binding can be assessed using commercially available assays known in the art, such as the Retrogenix Off-Target Assay. In short, the antibody is tested on a microarray containing HEK293 cells that individually express thousands of human membrane and secretory proteins. Binding of the antibody to a potential off-target must be confirmed using FACS on cells that overexpress the potential off-target.
术语“亲和性”是本领域的术语,并描述了结合物、抗体或抗体片段与靶标之间的结合强度。抗体及其片段对靶标的“亲和力”可以使用本领域公知或本文所述的技术来确定,例如通过ELISA、等温滴定量热法(ITC)、表面等离子共振(SPR)、流式细胞术或荧光偏振测定。优选地,亲和性以解离常数KD提供。The term "affinity" is a term used in the art and describes the binding strength between a conjugate, antibody, or antibody fragment and a target. The "affinity" of antibodies and their fragments to a target can be determined using techniques known in the art or described herein, such as by ELISA, isothermal titration (ITC), surface plasmon resonance (SPR), flow cytometry, or fluorescence polarization assay. Preferably, affinity is provided as a dissociation constant KD.
“解离常数”(KD)具有摩尔单位(M),并对应于一半靶标蛋白处于平衡状态时的结合物/抗体浓度。解离常数越小,结合物或抗体与其靶标之间的亲和力越高。The "dissociation constant" (KD) has molar units (M) and corresponds to the concentration of the conjugate/antibody when half of the target protein is in equilibrium. The smaller the dissociation constant, the higher the affinity between the conjugate or antibody and its target.
根据本发明,抗体优选具有至少10-7M(作为KD值)的靶标亲和力,更优选至少10-8M,甚至更优选在10-9M至10-11M的范围内。KD值可优选通过表面等离子体共振光谱法测定,例如本文别处所述。如果发现测定条件影响测定的KD,则应使用标准偏差最小的测定设置。According to the present invention, the antibody preferably has a target affinity of at least 10⁻⁷ M (as a KD value), more preferably at least 10⁻⁸ M, and even more preferably in the range of 10⁻⁹ M to 10⁻¹¹ M. The KD value can preferably be determined by surface plasmon resonance spectroscopy, as described elsewhere herein. If it is found that the assay conditions affect the measured KD, the assay settings with the smallest standard deviation should be used.
“半最大有效浓度”(EC50)是指在规定的培养时间后,诱导在基线和最大值之间的一半的应答的药物、抗体、片段、缀合物或分子的浓度。在抗体结合的情况下,EC50因此反映了最大结合的一半所需的抗体浓度。如果可以通过描述所应用药物、抗体、片段、缀合物或分子浓度与信号之间的关系的剂量-反应曲线的数学建模(例如,非线性回归)来确定拐点,则可以确定EC50。例如,如果剂量-反应曲线遵循S形曲线,则可以确定EC50。当反应是抑制时,EC50被称为半最大抑制浓度(IC50)。EC80可作必要的修改后确定。The "half-maximum effective concentration" (EC50) refers to the concentration of a drug, antibody, fragment, conjugate, or molecule that induces half of the response between baseline and maximum after a specified incubation time. In the case of antibody binding, EC50 thus reflects the antibody concentration required for half of the maximum binding. EC50 can be determined if the inflection point can be determined by mathematical modeling (e.g., nonlinear regression) of the dose-response curve describing the relationship between the concentration of the applied drug, antibody, fragment, conjugate, or molecule and the signal. For example, if the dose-response curve follows an sigmoid curve, EC50 can be determined. When the response is inhibitory, EC50 is called the half-maximum inhibitory concentration (IC50). EC80 can be determined with necessary modifications.
术语“抗体”(Ab)是指与抗原特异性结合或免疫反应的免疫球蛋白分子,例如但不限于人IgG1,IgG2,IgG3,IgG4,IgM,IgD,IgE,IgA1,IgA2,小鼠IgG1,IgG2a,IgG2b,IgG2c,IgG3,IgA,IgD,IgE或IgM,大鼠IgG1,IgG2a,IgG2b,IgG2c,IgA,IgD,IgE或IgM,兔IgA1,IgA2,IgA3,IgE,IgG,IgM,山羊IgA,IgE,IgG1,IgG2,IgE,IgM或鸡IgY。抗体或抗体片段在轻链和重链可变结构域中包含互补决定区(CDR),也称为高变区。可变结构域中高度保守的部分称为框架(FR)。如本领域所知,描绘抗体高变区的氨基酸位置/边界可以根据上下文和本领域已知的各种定义而变化。如本文所用,免疫球蛋白氨基酸残基的编号是根据Kabat等的免疫球蛋白核酸残基编号系统进行的。天然重链和轻链的可变结构域各包含四个FR区域。每个链中的三个CDR被FR区紧密地连接在一起,并且与来自另一条链的CDR一起,有助于抗体抗原结合位点的形成,参见Kabat,E.A.,et al.″Sequences of Proteins ofImmunological Interest(Natl.Inst.Health,Bethesda,MD),GPO Publ.″No165-462(1987)。本文使用的术语抗体也指抗体片段,除非另有明确说明。根据各自的上下文,术语抗体也可以指具有免疫球蛋白样功能的任何蛋白质结合分子。The term "antibody" (Ab) refers to an immunoglobulin molecule that specifically binds to an antigen or responds to an immune response, such as, but not limited to, human IgG1, IgG2, IgG3, IgG4, IgM, IgD, IgE, IgA1, IgA2; mouse IgG1, IgG2a, IgG2b, IgG2c, IgG3, IgA, IgD, IgE, or IgM; rat IgG1, IgG2a, IgG2b, IgG2c, IgA, IgD, IgE, or IgM; rabbit IgA1, IgA2, IgA3, IgE, IgG, IgM; goat IgA, IgE, IgG1, IgG2, IgE, IgM; or chicken IgY. Antibodies or antibody fragments contain complementarity-determining regions (CDRs), also known as hypervariable regions, within variable domains of the light and heavy chains. Highly conserved portions within the variable domains are called frames (FRs). As is known in the art, the amino acid positions/boundaries depicting the hypervariable regions of an antibody can vary depending on the context and various definitions known in the art. As used herein, the numbering of immunoglobulin amino acid residues follows the immunoglobulin nucleic acid residue numbering system of Kabat et al. The variable domains of both the natural heavy and light chains each contain four FR regions. The three CDRs in each chain are tightly linked together by the FR regions and, together with CDRs from the other chain, contribute to the formation of antibody-antigen binding sites; see Kabat, E.A., et al. "Sequences of Proteins of Immunological Interest" (Natl. Inst. Health, Bethesda, MD), GPO Publ. "No. 165-462 (1987). The term antibody as used herein also refers to antibody fragments unless otherwise explicitly stated. Depending on the context, the term antibody may also refer to any protein-binding molecule with immunoglobulin-like function.
术语“CDR”是指抗体的互补决定区。如本领域已知的,互补决定区(CDR)是抗体和T细胞受体中可变链的一部分。一组CDR构成一个副表位。CDR对抗原特异性的多样性至关重要。有三个CDR(CDR1、CDR2和CDR3),非连续地排列在抗原受体可变结构域的氨基酸序列上。由于抗原受体通常包含两个可变结构域(在两个不同的多肽链上,重链和轻链),因此每个抗原受体通常有六个CDR可以共同与抗原接触。轻链的CDR是LCDR1、LCDR2和LCDR3。重链的CDR被称为HCDR1、HCDR2和HCDR3。HCDR3是最可变的互补决定区(参见,例如,Chothia,Cyrus,and Arthur M.Lesk.″Canonical structures for the hypervariable regionsof immunoglobulins.″Journal of molecular biology 196.4(1987):901-917.;Kabat,E.A.,et al.″Sequences of proteins of immunological interest.Bethesda,MD:USDepartment of Health and Human Services.″Public Health Service,NationalInstitutes of Health(1991)∶103-511)。The term "CDR" refers to the complementarity-determining region (CDR) of an antibody. As is known in the art, a complementarity-determining region (CDR) is part of a variable chain in antibodies and T-cell receptors. A set of CDRs constitutes a paraepitope. CDRs are crucial for the diversity of antigen specificity. There are three CDRs (CDR1, CDR2, and CDR3), which are arranged discontinuously on the amino acid sequence of the variable domain of an antigen receptor. Since antigen receptors typically contain two variable domains (on two different polypeptide chains, a heavy chain and a light chain), each antigen receptor typically has six CDRs that can co-contact with the antigen. The CDRs of the light chain are LCDR1, LCDR2, and LCDR3. The CDRs of the heavy chain are referred to as HCDR1, HCDR2, and HCDR3. HCDR3 is the most variable complementarity-determining region (see, for example, Chothia, Cyrus, and Arthur M. Lesk. "Canonical structures for the hypervariable regions of immunoglobulins." Journal of Molecular Biology 196.4 (1987): 901-917.; Kabat, E.A., et al. "Sequences of proteins of immunological interest. Bethesda, MD: USDa department of health and human services." Public Health Service, National Institutes of Health (1991): 103-511).
“恒定区”是指赋予效应子功能的抗体分子部分。重链恒定区可以选自五种同种型中的任何一种:alpha(α),delta(δ),epsilon(ε),gamma(g),or mu(μ)。The "constant region" refers to the portion of an antibody molecule that confers the function of an effector. The heavy chain constant region can be selected from any of five isotypes: alpha (α), delta (δ), epsilon (ε), gamma (g), or mu (μ).
本文中使用的术语“Fc结构域”、“Fc区域”或“Fc部分”是指包含至少一部分恒定区的抗体重链的C端区域。该术语包括天然序列Fc区和变体Fc区。例如,人IgG重链Fc区可以从Cys226或Pro230延伸到重链的羧基末端。As used herein, the terms “Fc domain,” “Fc region,” or “Fc portion” refer to the C-terminal region of an antibody heavy chain that contains at least a portion of the constant region. This terminology includes native sequence Fc regions and variant Fc regions. For example, the human IgG heavy chain Fc region can extend from Cys226 or Pro230 to the carboxyl terminus of the heavy chain.
根据本发明的抗体或结合片段可以被修饰以改变至少一种恒定区介导的生物效应功能。例如,在一些实施方式中,抗体可以被修饰以相对于未修饰的抗体减少或增强至少一种恒定区介导的生物效应功能,例如减少或改善与Fc受体(FcγR)的结合。FcγR结合可能会降低,例如,通过突变抗体的免疫球蛋白恒定区片段中用于Fcγ受体相互作用的特定区域,(参见,例如,Canfield,Stephen M.,and Sherie L.Morrison.″The bindingaffinity of human IgG for its high affinity Fc receptor is determined bymultiple amino acids in the CH2 domain and is modulated by the hinge region.″The Journal of experimental medicine173.6(1991):1483-1491;and Lund,John,etal.″Human Fc gamma RI and Fc gamma RII interact with distinct but overlappingsites on human IgG.″The Journal of Immunology 147.8(1991):2657-2662)。FcγR结合可能会增强,例如通过非岩藻糖基化(afucosylation)。减少FcγR结合也可能减少依赖于Fcγ受体相互作用的其他效应功能,如调理、吞噬和抗原依赖性细胞毒性(“ADCC”)。The antibody or binding fragment according to the invention can be modified to alter the biological effector function mediated by at least one constant region. For example, in some embodiments, the antibody can be modified to reduce or enhance the biological effector function mediated by at least one constant region relative to an unmodified antibody, such as reducing or improving binding to the Fc receptor (FcγR). FcγR binding may be reduced, for example, by mutating a specific region in the immunoglobulin constant region fragment of the antibody that is used for Fcγ receptor interaction (see, for example, Canfield, Stephen M., and Sherie L. Morrison. "The binding affinity of human IgG for its high affinity Fc receptor is determined by multiple amino acids in the CH2 domain and is modulated b y the hinge region. "The Journal of Experimental Medicine 173.6 (1991): 1483-1491; and Lund, John, et al. "Human Fc gamma RI and Fc gamma RII interact with distinct but overlapping sites on human IgG." The Journal of Immunology 147.8 (1991): 2657-2662). FcγR binding may be enhanced, for example, through afucosylation. Reduced FcγR binding may also reduce other effector functions dependent on Fcγ receptor interactions, such as opsonization, phagocytosis, and antigen-dependent cytotoxicity (“ADCC”).
此外,解决Fc与FcRn的相互作用允许调节体内抗体的半衰期。通过例如引入突变H435A来消除相互作用导致极短的半衰期,因为抗体不再受到FcRn循环的溶酶体降解的保护。在根据所有方面的一些优选实施方式中,根据本发明的抗体包含突变H43 5A或以其他方式被工程化以减少半衰期。Furthermore, resolving the interaction between Fc and FcRn allows for the regulation of the antibody's half-life in vivo. Eliminating this interaction, for example, by introducing a mutant H435A, results in an extremely short half-life because the antibody is no longer protected against lysosomal degradation by the FcRn cycle. In some preferred embodiments according to all aspects, the antibody according to the invention comprises a mutant H435A or is otherwise engineered to reduce its half-life.
相反包含“YTE”突变(M252Y/S254T/T256E)和/或等同突变(如“LS”突变(M428L/N434S))的抗体已显示,通过从临床前物种和人类的内体中更有效地回收可显著延长半衰期(Dall’Acqua,William F.,et al.″Increasing the affinity of a human IgG1 forthe neonatal Fc receptor:biological consequences.″The Journal of Immunology169.9(2002):5171-5180.;Zalevsky,Jonathan,et al.″Enhanced antibody half-lifeimproves in vivo activity.″Nature biotechnology 28.2(2010):157-159)。在根据所有方面的一些优选实施方式中,根据本发明的抗体包含YTE突变(M252Y/S254T/T256E)和/或等同突变,例如LS(M428L/N434S),或以其他方式被工程化用于改善半衰期。Haraya,Kenta,Tatsuhiko Tachibana,and Tomoyuki Igawa.″Improvement of pharmacokineticproperties of therapeutic antibodies by antibody engineering.″Drug metabolismand pharmacokinetics 34.1(2019):25-41.,and/or Lee,Chang-Han,et al.″Anengineered human Fc domain that behaves like a pH-toggle switch for ultra-long circulation persistence.″Nature communications 10.1(2019):1-11可以找到延长半衰期的合适Fc工程化方法,均通过引用并入本文。Conversely, antibodies containing “YTE” mutations (M252Y/S254T/T256E) and/or equivalent mutations (such as “LS” mutations (M428L/N434S)) have been shown to significantly prolong half-life through more efficient recovery from preclinical species and human endosomes (Dall’Acqua, William F., et al. "Increasing the affinity of a human IgG1 for the neonatal Fc receptor: biological consequences." The Journal of Immunology 169.9 (2002): 5171-5180.; Zalevsky, Jonathan, et al. "Enhanced antibody half-life improves in vivo activity." Nature Biotechnology 28.2 (2010): 157-159). In some preferred embodiments according to all aspects, the antibody according to the invention comprises a YTE mutation (M252Y/S254T/T256E) and/or an equivalent mutation, such as LS (M428L/N434S), or is otherwise engineered to improve half-life. Haraya, Kenta, Tatsuhiko Tachibana, and Tomoyuki Igawa. "Improvement of pharmacokinetic properties of therapeutic antibodies by antibody engineering." Drug Metabolism and Pharmacokinetics 34.1 (2019): 25-41., and/or Lee, Chang-Han, et al. "An engineered human Fc domain that behaves like a pH-toggle switch for ultra-long circulation persistence." Nature Communications 10.1 (2019): 1-11. Suitable Fc engineering methods for extending half-life can be found, all of which are incorporated herein by reference.
“非岩藻糖基化”抗体是经过工程化的抗体,使得抗体Fc区的寡糖不具有任何岩藻糖单元。抗体的糖基化可以改变其功能。例如,如果IgG的CH2结构域中N297处的糖基化被完全消除,那么与FcγRs的结合就会丢失。然而,N297处特定碳水化合物组成的调节可具有相反的效果并增强抗体的ADCC活性。简而言之,抗体对激活FcγRs的亲和力取决于N297 N-连接寡糖的组成。有32种可能的低聚糖组合可出现在该位置。天然存在的人IgG和由杂交瘤或其他常见表达系统产生的人IgG通常包含N-乙酰氨基葡萄糖(GlcNAc)和形成核心碳水化合物的三个甘露糖残基。该核连接到两个额外的GlcNAc基团以形成双十分支。半乳糖在每个分支的添加以及唾液酸在这些半乳糖分子中的末端添加都可能发生。岩藻糖通常是核心GlcNAc的一部分。这种岩藻糖通过空间位阻阻碍抗体与FcγRIIIA的相互作用。因此,消除这种岩藻糖分子同时在该位点保持其他形式的糖基化增加了抗体与活化FcγRs的结合,增强其引发ADCC和/或ADCP的能力(Almagro,Juan C.,et al.″Progress and challenges inthe design and clinical development of antibodies for cancer therapy.″Frontiers in immunology 8(2018):1751)。制备无岩藻糖抗体的方法包括在大鼠骨髓瘤YB2/0细胞中生长(ATCC CRL 1662)。YB2/0细胞表达低水平的其编码α-1,6-岩藻糖基转移酶(这是多肽岩藻糖化所必需的酶)的FUT8 mRNA。非岩藻糖基化抗体对于本发明是优选的。"Unfucosylated" antibodies are engineered antibodies so that the oligosaccharide in the Fc region of the antibody does not contain any fucose units. Glycosylation of an antibody can alter its function. For example, if the glycosylation at N297 in the CH2 domain of IgG is completely removed, binding to FcγRs is lost. However, modulation of the specific carbohydrate composition at N297 can have the opposite effect and enhance the antibody's ADCC activity. In short, the antibody's affinity for activating FcγRs depends on the composition of the N297 N-linked oligosaccharide. There are 32 possible combinations of oligosaccharides that can appear at this position. Naturally occurring human IgG and human IgG produced by hybridomas or other common expression systems typically contain N-acetylglucosamine (GlcNAc) and three mannose residues forming the core carbohydrate. This core is linked to two additional GlcNAc groups to form a bibranch. The addition of galactose to each branch and the terminal addition of sialic acid to these galactose molecules can both occur. Fucose is typically part of the core GlcNAc. This fucose sterically hinders the interaction between the antibody and FcγRIIIA. Therefore, eliminating this fucose molecule while maintaining other forms of glycosylation at this site increases the binding of the antibody to activated FcγRs, enhancing its ability to induce ADCC and/or ADCP (Almagro, Juan C., et al. "Progress and challenges in the design and clinical development of antibodies for cancer therapy." Frontiers in Immunology 8 (2018): 1751). A method for preparing fucose-free antibodies involves growing the cells in rat myeloma YB2/0 cells (ATCC CRL 1662). YB2/0 cells express low levels of FUT8 mRNA encoding α-1,6-fucosyltransferase (an enzyme essential for peptide fucosylation). Non-fucosylated antibodies are preferred for this invention.
“抗体依赖性细胞毒性”(“ADCC”),也称为“抗体依赖性细胞介导的细胞毒性”,是一种细胞介导免疫防御机制,通过这种机制,免疫细胞主动裂解膜表面抗原已被特异性抗体结合的靶细胞。ADCC通过抗体或片段与FcγRIIIa的相互作用介导。在人类中,FcγRIII以两种不同的形式存在:FcγRIIIa(CD16a)和FcγRI IIb(CD16b)。虽然FcγRIIIa作为跨膜受体在单核细胞、中性粒细胞、肥大细胞、巨噬细胞和自然杀伤细胞上表达,但FcγRIIIb仅在中性粒细胞上表达。这些受体与IgG抗体的Fc部分结合,然后激活由人效应细胞介导的抗体依赖性细胞介导细胞毒性(ADCC)。Antibody-dependent cytotoxicity (ADCC), also known as antibody-dependent cell-mediated cytotoxicity, is a cell-mediated immune defense mechanism in which immune cells actively lyse target cells whose membrane surface antigens have been bound by specific antibodies. ADCC is mediated through the interaction of antibodies or fragments with FcγRIIIa. In humans, FcγRIII exists in two distinct forms: FcγRIIIa (CD16a) and FcγRIIb (CD16b). While FcγRIIIa is expressed as a transmembrane receptor on monocytes, neutrophils, mast cells, macrophages, and natural killer cells, FcγRIIIb is expressed only on neutrophils. These receptors bind to the Fc portion of IgG antibodies, thereby activating antibody-dependent cell-mediated cytotoxicity (ADCC) mediated by human effector cells.
文献中已经描述了用于确定人类受试者中ADCC诱导的不同测定系统,其适用于本文公开的主题的表征。例如,Yao Te Hsieh等人研究了不同的ADCC测定系统,即基于(i)来自人类供体的自然杀伤细胞(FcγRIIIA+初级NK)的测定,(ii)FcγRIIIA工程化NK-92细胞和(iii)FcβRIIIA/NFAT-RE/luc2工程化Jurkat T细胞(Hsieh,Yao-Te,et al.″Characterization of FcγRIIIA effector cells used in in vitro ADCC bioassay:comparison of primary NK cells with engineered NK-92 and Jurkat T cells.″Journal of Immunological Methods 441(2017):56-66,全部内容并入本文;特别是参考这些测定的方法描述)。简而言之,所有三种效应细胞系统都差异表达FcγRIIIA,并提供剂量依赖性ADCC途径活性,但只有原代NK细胞和工程化NK-92细胞能够诱导ADCC介导的细胞裂解。对于ADCC活性的功能评估,原代NK或NK-92(V-158)细胞因此更好地反映了生理上相关的ADCC作用机制。作为工程化细胞系,NK-92细胞可能比原代NK细胞表现得更具再现性,因此是确定人类受试者ADCC反应的优选测定系统,例如在怀疑的情况下。Different assay systems for determining ADCC induction in human subjects have been described in the literature and are applicable to the characterization of the subject matter disclosed herein. For example, Yao Te Hsieh et al. investigated different ADCC assay systems based on (i) natural killer cells (FcγRIIIA+ primary NK) from human donors, (ii) FcγRIIIA-engineered NK-92 cells, and (iii) FcβRIIIA/NFAT-RE/luc2-engineered Jurkat T cells (Hsieh, Yao-Te, et al. "Characterization of FcγRIIIA effector cells used in in vitro ADCC bioassay: comparison of primary NK cells with engineered NK-92 and Jurkat T cells." Journal of Immunological Methods 441 (2017): 56-66, the entire contents of which are incorporated herein by reference; in particular, the methodologies described for these assays are described). In summary, all three effector cell systems differentially express FcγRIIIA and provide dose-dependent ADCC pathway activity, but only primary NK cells and engineered NK-92 cells are able to induce ADCC-mediated cell lysis. For functional assessment of ADCC activity, primary NK or NK-92 (V-158) cells therefore better reflect the physiologically relevant mechanisms of ADCC action. As an engineered cell line, NK-92 cells may exhibit more reproducibility than primary NK cells and are therefore the preferred assay system for determining ADCC responses in human subjects, for example, in cases of suspicion.
诱导ADCC的抗体或抗原结合片段是在NK效应细胞存在下可引发靶细胞大量裂解的抗体。优选地,ADCC诱导导致至少2%、5%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或99%的靶细胞裂解。The antibody or antigen-binding fragment that induces ADCC is an antibody that can induce massive lysis of target cells in the presence of NK effector cells. Preferably, ADCC induction results in at least 2%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 99% lysis of target cells.
“抗体依赖性细胞吞噬作用”(“ADCP”)是指抗体调理的靶细胞激活巨噬细胞表面的FcγRs以诱导吞噬作用,从而导致靶细胞内化和降解的机制。对于ADCP,与作为效应细胞的巨噬细胞的结合通常通过抗体FC部分与巨噬细胞表达的FCγRIIa(CD32a)的相互作用发生。Antibody-dependent phagocytosis (ADCP) refers to the mechanism by which antibody-mediated target cells activate FcγRs on the surface of macrophages to induce phagocytosis, leading to the internalization and degradation of target cells. For ADCP, binding to macrophages, which are effector cells, usually occurs through the interaction of the antibody FC portion with FCγRIIa (CD32a) expressed by macrophages.
诱导ADCP的抗体或抗原结合片段是一种可在巨噬细胞存在下引发靶细胞的大量吞噬作用的抗体。优选地,ADCP诱导导致至少2%、5%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或99%的靶细胞的吞噬作用。The antibody or antigen-binding fragment that induces ADCP is an antibody that can trigger a large-scale phagocytosis of target cells in the presence of macrophages. Preferably, ADCP induction results in phagocytosis of at least 2%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 99% of the target cells.
“补体依赖性细胞毒性”(“CDC”)是IgG和IgM抗体的效应功能。当它们与靶细胞(例如细菌或病毒感染的细胞)上的表面抗原结合时,经典补体途径通过将蛋白C1q与这些抗体结合而触发,从而形成膜攻击复合物(MAC)和靶细胞裂解。补体系统被人IgG1、IgG3和IgM抗体有效激活,被IgG2抗体弱激活,不被IgG4抗体激活。这是治疗性抗体(也是根据本发明的抗体的特定实施方式)可以实现抗肿瘤作用的一种作用机制。存在几种实验室方法来确定CDC的效力,并且在本领域中是已知的。Complement-dependent cytotoxicity (“CDC”) is the effector function of IgG and IgM antibodies. When they bind to surface antigens on target cells (e.g., cells infected by bacteria or viruses), the classical complement pathway is triggered by the binding of protein C1q to these antibodies, leading to the formation of the membrane attack complex (MAC) and target cell lysis. The complement system is effectively activated by human IgG1, IgG3, and IgM antibodies, weakly activated by IgG2 antibodies, and not activated by IgG4 antibodies. This is one mechanism by which therapeutic antibodies (and specific embodiments of antibodies according to the invention) can achieve antitumor effects. Several laboratory methods exist to determine the potency of CDC and are known in the art.
诱导CDC的抗体或抗原结合片段是可引发大量膜攻击复合物形成和靶细胞裂解的抗体。优选地,CDC诱导导致至少2%、5%、10%、15%、20%、25%、30%、35%、40%、45%、50%、55%、60%、65%、70%、75%、80%、85%、90%、95%或99%的靶细胞裂解。The antibody or antigen-binding fragment that induces CDC is an antibody that can trigger the formation of a large number of membrane attack complexes and target cell lysis. Preferably, CDC induction results in at least 2%, 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 99% of target cells lysed.
包含Fc区的抗体可以或可以不包含促进Fc结构域的第一和第二亚基结合的修饰。Antibodies containing the Fc region may or may not contain modifications that promote the binding of the first and second subunits of the Fc domain.
“促进Fc结构域的第一和第二亚基结合的修饰”是对肽骨架的操纵或Fc结构亚基的翻译后修饰,其减少或阻止包含Fc结构区亚基的多肽与相同多肽的结合以形成同二聚体。包含Fc区的抗体可以或可以不包含促进Fc结构域的第一和第二亚基结合的修饰。本文所用的修饰促进结合特别包括对期望结合的两个Fc结构域亚基中的每一个(即Fc结构的第一和第二亚基)进行的单独修饰,其中所述修饰彼此互补,以促进两个Fc结构域亚单位的结合。例如,修饰促进结合可以改变一个或两个Fc结构域亚基的结构或电荷,从而使它们的结合在空间上或静电上有利。因此,(异源)二聚发生在这可能是不相同的包含第一Fc结构域亚基的多肽和包含第二Fc结构亚基的肽之间,例如在融合到每个亚基的其他成分(例如抗原结合部分)不相同的意义上。在一些实施方式中,修饰促进结合包括Fc结构域中的氨基酸突变,特别是氨基酸取代。在一个特定的实施方式中,修饰促进结合在Fc结构域的两个亚基中的每一个中包括单独的氨基酸突变,特别是氨基酸置换。"Modifications that promote the binding of the first and second subunits of the Fc domain" refer to manipulation of the peptide backbone or post-translational modifications of the Fc subunits that reduce or prevent the binding of a peptide containing an Fc subunit to the same peptide to form a homodimer. Antibodies containing the Fc region may or may not contain modifications that promote the binding of the first and second subunits of the Fc domain. Modifications promoting binding as used herein specifically include individual modifications to each of the two Fc domain subunits to which binding is desired (i.e., the first and second subunits of the Fc structure), wherein the modifications are complementary to each other to promote the binding of the two Fc domain subunits. For example, modification-promoted binding can alter the structure or charge of one or both Fc domain subunits, thereby making their binding spatially or electrostatically favorable. Thus, (hetero)dimerization occurs between peptides containing a first Fc domain subunit and peptides containing a second Fc subunit, which may be dissimilar, for example, in the sense that other components fused to each subunit (e.g., antigen-binding moieties) are different. In some embodiments, modification-promoted binding includes amino acid mutations in the Fc domain, particularly amino acid substitutions. In one particular implementation, the modification promotes binding in each of the two subunits of the Fc domain, including individual amino acid mutations, particularly amino acid substitutions.
本文所用抗体的“片段”需要基本上保持全长抗体的所需亲和力。因此,抗人CCR8抗体的合适片段将保持与靶趋化因子受体结合的能力,例如与人CCR8受体结合。抗体片段包含全长抗体的一部分,通常是其抗原结合区或可变区。抗体片段的实例包括但不限于Fab、Fab’、F(ab’)2和Fv片段、单链抗体分子、双抗体和域抗体,见Holt,Lucy J.,et al.″Domain antibodies:proteins for therapy.″Trends in biotechnology 21.11(2003):484-490。The “fragments” of antibodies used in this article need to retain the required affinity of the full-length antibody. Therefore, a suitable fragment of an anti-human CCR8 antibody will retain the ability to bind to target chemokine receptors, such as the human CCR8 receptor. An antibody fragment comprises a portion of the full-length antibody, typically its antigen-binding region or variable region. Examples of antibody fragments include, but are not limited to, Fab, Fab’, F(ab’)2, and Fv fragments, single-chain antibody molecules, biantibodies, and domain antibodies; see Holt, Lucy J., et al. “Domain antibodies: proteins for therapy.” Trends in biotechnology 21.11 (2003): 484-490.
“Fab片段”包含轻链的恒定结构域和重链的第一个恒定结构域(CH2)。The “Fab fragment” contains the constant domain of the light chain and the first constant domain (CH2) of the heavy chain.
“Fab′片段”与Fab片段的不同之处在于在重链CH2结构域的羧基末端添加了几个残基,包括来自抗体铰链区的一个或多个半胱氨酸。The “Fab′ fragment” differs from the Fab fragment in that it has several residues added to the carboxyl terminus of the heavy chain CH2 domain, including one or more cysteine residues from the antibody hinge region.
“F(ab′)片段”是通过F(ab’)2胃蛋白酶消化产物的铰链半胱氨酸处的二硫键断裂产生的。抗体片段的其他化学偶联是本领域普通技术人员已知的。Fab和F(ab′)2片段缺乏完整抗体的Fc片段,从动物的循环中更快地清除,并且可能具有比完整抗体更少的非特异性组织结合,参见例如Wahl,Richard L.,Charles W.Parker,and Gordon W.Philpott.″Improved radioimaging and tumor localization with monoclonal F(ab′)2.″Journalof nuclear medicine:official publication,Society of Nuclear Medicine 24.4(1983):316-325。The “F(ab′) fragment” is produced by the cleavage of the disulfide bond at the hinge cysteine residue of the F(ab′)2 pepsin digestion product. Other chemical conjugations of antibody fragments are known to those skilled in the art. The Fab and F(ab′)2 fragments lack the Fc fragment of the intact antibody, are cleared from the animal circulation more rapidly, and may have less nonspecific tissue binding than the intact antibody, see, for example, Wahl, Richard L., Charles W. Parker, and Gordon W. Philpott. “Improved radioimaging and tumor localization with monoclonal F(ab′)2.” Journal of nuclear medicine: official publication, Society of Nuclear Medicine 24.4 (1983): 316-325.
“Fv片段”是包含完整靶标识别和结合位点的抗体的最小片段。该区域由一个重链和一个轻链可变结构域的二聚体以紧密、非共价结合(VH-VL二聚体)而组成。正是在这种构型中,每个可变结构域的三个CDR相互作用以限定VH-VL二聚体表面上的抗原结合位点。通常,六个CDR赋予抗体抗原结合特异性。然而,在一些情况下,即使是单个可变结构域(或Fv的一半,其仅包含三个靶特异性CDR)也可能具有识别和结合抗原的能力,尽管其亲和力低于整个结合位点。The “Fv fragment” is the smallest fragment of an antibody containing both complete target recognition and binding sites. This region consists of a dimer of a heavy chain and a light chain variable domain bound together in a tight, non-covalent manner (VH-VL dimer). It is in this configuration that the three CDRs of each variable domain interact to define the antigen-binding site on the surface of the VH-VL dimer. Typically, six CDRs confer antigen-binding specificity to the antibody. However, in some cases, even a single variable domain (or half of the Fv fragment, which contains only three target-specific CDRs) may have the ability to recognize and bind antigens, although its affinity is lower than that of the entire binding site.
“单链Fv”或“scFv”抗体片段包含单个多肽链中抗体的VH和VL结构域。通常,Fv多肽还包括VH和VL结构域之间的多肽接头,其使scFv能够形成抗原结合所需的结构。A "single-chain Fv" or "scFv" antibody fragment contains the VH and VL domains of the antibody within a single polypeptide chain. Typically, Fv polypeptides also include a polypeptide linker between the VH and VL domains, which enables the scFv to form the structure required for antigen binding.
“单域抗体”包含对靶标表现出足够亲和力的单个VH或VL域。在特定实施方式中,单域抗体是骆驼化抗体,参见例如Riechmann,Lutz,and Serge Muyldermans.″Singledomain antibodies:comparison of camel VH and camelised human VH domains.″Journal of immunological methods 231.1-2(1999):25-38。A “single-domain antibody” contains a single VH or VL domain that exhibits sufficient affinity for the target. In certain embodiments, a single-domain antibody is a camelified antibody, see, for example, Riechmann, Lutz, and Serge Muyldermans. “Singledomain antibodies: comparison of camel VH and camelised human VH domains.” Journal of Immunological Methods 231.1-2 (1999): 25-38.
“双特异性抗体”是对相同或不同抗原上至少两个不同表位具有结合特异性的单克隆抗体。在本公开中,一种结合特异性可针对靶趋化因子受体如CCR8,另一种可针对任何其他抗原,例如但不限于细胞表面蛋白、受体、受体亚基、组织特异性抗原、病毒衍生蛋白、病毒编码的包膜蛋白、细菌衍生蛋白或细菌表面蛋白。根据本发明的双特异性抗体构建体还包括包含多个结合域/结合位点的多特异性抗体构建体,例如三特异性抗体构建体,其中所述构建体包含三个结合域。A "bispecific antibody" is a monoclonal antibody that has binding specificity to at least two different epitopes on the same or different antigens. In this disclosure, one binding specificity may target a chemokine receptor such as CCR8, and the other may target any other antigen, such as, but not limited to, cell surface proteins, receptors, receptor subunits, tissue-specific antigens, virus-derived proteins, virus-encoded envelope proteins, bacterial-derived proteins, or bacterial surface proteins. The bispecific antibody constructs according to the invention also include multispecific antibody constructs comprising multiple binding domains/binding sites, such as trispecific antibody constructs, wherein the construct comprises three binding domains.
“衍生抗体”通常通过糖基化、乙酰化、聚乙二醇化、磷酸化、硫酸化、酰胺化、已知保护/阻断基团的衍生化、蛋白水解裂解、与细胞配体或其他蛋白质的连接进行修饰。许多化学修饰中的任何一种可以通过已知技术进行,包括但不限于特定的化学裂解、乙酰化、甲酰化、衣霉素的代谢合成等。此外,该衍生物可以含有一种或多种非天然氨基酸,例如,使用Wolfson,Wendy.″Amber codon flashing ambrx augments proteins with unnaturalamino acids.″Chemistry&biology 13.10(2006):1011-1012。根据本发明的抗体可以衍生化,例如糖基化或硫酸化。“Derived antibodies” are typically modified via glycosylation, acetylation, polyethylene glycolation, phosphorylation, sulfation, amidation, derivatization with known protecting/blocking groups, proteolytic cleavage, or linking to cellular ligands or other proteins. Any of these chemical modifications can be performed using known techniques, including but not limited to specific chemical cleavage, acetylation, formylation, and the metabolic synthesis of tunicamycin. Furthermore, the derivative may contain one or more non-natural amino acids, for example, using Wolfson, Wendy. “Amber codon flashing ambrx augmentations proteins with unnatural amino acids.” Chemistry & Biology 13.10 (2006): 1011-1012. Antibodies according to the invention can be derivatized, for example, by glycosylation or sulfation.
“单克隆抗体”是结合特定抗原的抗体的基本同质群体。单克隆免疫球蛋白可通过本领域技术人员熟知的方法获得(例如,参见Georges,and Cesar Milstein.″Continuous cultures of fused cells secreting antibody of predefinedspecificity.″nature 256.5517(1975):495-497.,和美国专利号4,376,110)。具有特异结合亲和力的免疫球蛋白或免疫球蛋白片段可以从原核或真核生物中分离、富集或纯化。本领域技术人员已知的常规方法能够在原核和真核生物中产生免疫球蛋白或免疫球蛋白片段和具有免疫球蛋白样功能的蛋白质结合分子。根据本发明的抗体优选是单克隆的。"Monoclonal antibodies" are a basic homogeneous group of antibodies that bind to a specific antigen. Monoclonal immunoglobulins can be obtained by methods well known to those skilled in the art (e.g., see Georges, and Cesar Milstein. "Continuous cultures of fused cells secreting antibody of predefined specificity." Nature 256.5517 (1975): 495-497, and U.S. Patent No. 4,376,110). Immunoglobulins or immunoglobulin fragments with specific binding affinity can be isolated, enriched, or purified from prokaryotes or eukaryotes. Conventional methods known to those skilled in the art can produce immunoglobulins or immunoglobulin fragments and protein-binding molecules with immunoglobulin-like functions in prokaryotes and eukaryotes. The antibodies according to the invention are preferably monoclonal.
“人源化抗体”包含源自非人类物种(例如小鼠)的CDR区,这些CDR区与任何必要的框架反向突变一起植入人类序列衍生的V区。因此,在大多数情况下,人源化抗体是人免疫球蛋白(受体抗体)的受体的高变区的残基被具有所需特异性、亲和力和能力的来自非人物种(供体抗体)(例如小鼠、大鼠、或非人灵长类动物)的高变区域的残基取代。例如,参见美国专利号5,225,539;5,585,089;5,693,761;5,693,762;5,859,205,各自通过引用并入本文。在某些情况下,人免疫球蛋白的框架残基被相应的非人残基取代。此外,人源化抗体可包含受体抗体或供体抗体中未发现的残基。进行这些修饰以进一步改进抗体性能(例如,获得期望的亲和力)。通常,人源化抗体将包含基本上所有的至少一个,通常是两个可变结构域,其中所有或基本上所有高变区对应于非人免疫球蛋白的那些,并且所有或基本所有框架区是人免疫球蛋白序列的那些。人源化抗体任选地包含免疫球蛋白恒定区(Fc)的至少一部分,通常是人免疫球蛋白的恒定区。有关更多详细信息,请参见Jones,Peter T.,et al.″Replacing the complementarity-determining regions in a human antibody withthose from a mouse.″Nature 321.6069(1986):522-525.;Riechmann,Lutz,et al.″Reshaping human antibodies for therapy.″Nature 332.6162(1988):323-327.;andPresta,Leonard G.″Antibody engineering.″Current Opinion in Structural Biology2.4(1992):593-596,各自通过引用并入本文。"Humanized antibodies" contain CDR regions derived from non-human species (e.g., mice), which, along with any necessary framework inverse mutations, are inserted into a human sequence-derived V region. Therefore, in most cases, humanized antibodies are created by replacing residues of the hypervariable region of the receptor for a human immunoglobulin (receptor antibody) with residues of the hypervariable region from a non-human species (donor antibody) (e.g., mouse, rat, or non-human primate) that possess the desired specificity, affinity, and ability. See, for example, U.S. Patent Nos. 5,225,539; 5,585,089; 5,693,761; 5,693,762; and 5,859,205, each incorporated herein by reference. In some cases, framework residues of the human immunoglobulin are replaced with corresponding non-human residues. Furthermore, humanized antibodies may contain residues not found in the receptor antibody or donor antibody. These modifications are made to further improve antibody performance (e.g., to achieve the desired affinity). Typically, humanized antibodies will contain at least one, usually two, variable domains, wherein all or substantially all hypervariable regions correspond to those of non-human immunoglobulins, and all or substantially all frame regions are those of human immunoglobulin sequences. Humanized antibodies optionally contain at least a portion of the immunoglobulin constant region (Fc), typically the constant region of human immunoglobulins. For further details, see Jones, Peter T., et al. "Replacing the complementarity-determining regions in a human antibody with those from a mouse." Nature 321.6069 (1986): 522-525.; Riechmann, Lutz, et al. "Reshaping human antibodies for therapy." Nature 332.6162 (1988): 323-327.; and Presta, Leonard G. "Antibody engineering." Current Opinion in Structural Biology 2.4 (1992): 593-596, each incorporated herein by reference.
完全人抗体(人抗体)包括人源CDR,即人来源CDR。优选地,根据本发明的全人抗体是与最接近的人VH种系基因(例如从推荐列表中提取并在IMGT/Domain gap align中分析的序列)具有至少90%、91%、92%、93%、94%、95%、96%、97%、98%、99%、99.5%或100%序列同一性的抗体。Fully human antibodies (human antibodies) include human-derived CDRs, i.e., human-derived CDRs. Preferably, the fully human antibody according to the invention is an antibody having at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, 99.5%, or 100% sequence identity with the closest human VH germline gene (e.g., a sequence extracted from a recommended list and analyzed in IMGT/Domain gap align).
如2017年前有效的INN物种子系统等常用命名系统所接受的,与基于IMGT数据库确定的最接近的人类种系参考相比,全人类抗体可能包含少量种系偏差(http://www.imgt.org,2019年11月29日)。例如,与最接近的人类种系参考相比,根据本发明的全人类抗体可在CDR中包含多达1、2、3、4、5、6、7、8、9、10、12、13、14或15种种系偏差。通过克隆技术结合细胞富集或永生化步骤,可以从人源B细胞中开发出完全人抗体。然而,临床上使用的大多数完全人抗体要么是从针对人IgG基因座转基因的免疫小鼠中分离的,要么是通过噬菌体展示从复杂的组合文库中分离的(Brüggemann,Marianne,et al.″Human antibodyproduction in transgenic animals.″Archivum immunologiae et therapiaeexperimentalis 63.2(2015):101-108.;Carter,Paul J.″Potent antibodytherapeutics by design.″Nature reviews immunology 6.5(2006):343-357.;Frenzel,André,Thomas Schirrmann,and Michael Hust.″Phage display-derived humanantibodies in clinical development and therapy.″MAbs.Vol.8.No.7.Taylor&Francis,2016.;Nelson,Aaron L.,Eugen Dhimolea,and Janice M.Reichert.″Development trends for human monoclonal antibody therapeutics.″Nature reviewsdrug discovery 9.10(2010):767-774)。As accepted by commonly used nomenclature systems such as the INN species subsystem, which was valid before 2017, whole-human antibodies may contain a small amount of phylogenetic bias compared to the closest human germline reference determined based on the IMGT database (http://www.imgt.org, November 29, 2019). For example, whole-human antibodies according to the present invention may contain up to 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 12, 13, 14, or 15 phylogenetic biases in their CDRs compared to the closest human germline reference. Completely human antibodies can be developed from human B cells using cloning techniques combined with cell enrichment or immortalization steps. However, most fully human antibodies used clinically are either isolated from transgenic mice targeting the human IgG locus or from complex combinatorial libraries via phage display (Brüggemann, Marianne, et al. "Human antibody production in transgenic animals." Archivum immunologiae et therapiae experimentalis 63.2 (2015): 101-108.; Carter, Paul J. "Potent antibody therapy by design." Nature reviews immunology 6.5 (2006): 343-357.; Frenzel, A. ndré, Thomas Schirrmann, and Michael Hust. "Phage display-derived humanantibodies in clinical development and therapy." MAbs.Vol.8.No.7.Taylor&Francis, 2016.; Nelson , Aaron L., Eugen Dhimolea, and Janice M. Reichert. "Development trends for human monoclonal antibody therapeutics." Nature reviews drug discovery 9.10 (2010): 767-774).
有几种技术可用于产生完全人抗体或产生包含人源CDR的抗体(参见WO2008112640)。剑桥抗体技术公司(CAT)和Dyax已经从从免疫的人分离的外周B细胞中获得了抗体cDNA序列,并设计了噬菌体展示库用于鉴定具有特定特异性的人可变区序列。简言之,抗体可变区序列与M13噬菌体的基因III或基因VIII结构融合。这些抗体可变区序列在携带相应序列的噬菌体末端以Fab或单链Fv(scFv)结构表达。通过使用不同水平的抗原结合条件(严格性)的多轮筛选过程,可以选择和分离表达对感兴趣抗原特异的Fab或scFv结构的噬菌体。然后可以使用标准测序程序来阐明所选噬菌体的抗体可变区cDNA序列。然后,这些序列可用于使用已建立的抗体工程技术重建具有所需同种型的完整抗体。根据该方法构建的抗体被认为是完全人类抗体(包括CDR)。为了提高所选抗体的免疫反应性(抗原结合亲和力和特异性),可以引入体外成熟过程,包括不同重链和轻链的组合结合、重链和重链的CDR3处的缺失/添加/突变(以模拟V-J和V-D-J重组),和随机突变(模拟体细胞超突变)。这种方法产生的“全人”抗体的一个实例是抗肿瘤坏死因子α抗体Humira(阿达木单抗)。Several techniques exist for generating fully human antibodies or antibodies containing human CDRs (see WO2008112640). Cambridge Antibody Technologies (CAT) and Dyax have obtained antibody cDNA sequences from peripheral B cells isolated from immunized individuals and designed phage display libraries to identify human variable region sequences with specific specificity. In short, the antibody variable region sequence is fused to the structure of gene III or gene VIII of M13 phage. These antibody variable region sequences are expressed at the ends of phages carrying the corresponding sequences in either a Fab or single-stranded Fv (scFv) structure. Through a multi-round screening process using different levels of antigen-binding conditions (strictness), phages expressing Fab or scFv structures specific to the antigen of interest can be selected and isolated. The antibody variable region cDNA sequence of the selected phages can then be elucidated using standard sequencing procedures. These sequences can then be used to reconstruct a fully human antibody with the desired isotype using established antibody engineering techniques. Antibodies constructed according to this method are considered fully human antibodies (including CDRs). To enhance the immunoreactivity (antigen-binding affinity and specificity) of selected antibodies, in vitro maturation processes can be introduced, including combined binding of different heavy and light chains, deletion/addition/mutation at CDR3 of heavy chains (to mimic V-J and V-D-J recombination), and random mutation (to mimic somatic hypermutation). An example of a “fully human” antibody produced by this approach is the anti-tumor necrosis factor α antibody Humira (adalimumab).
术语“多核苷酸”是指重组或合成生产的聚合脱氧核糖核苷酸或其类似物,或修饰的多核苷酸。该术语包括双链和单链DNA或RNA。多核苷酸可以整合到例如小环、质粒、粘粒、小染色体或人工染色体中。多核苷酸可分离或整合在另一核酸分子中,例如在真核宿主细胞的表达载体或染色体中。The term "polynucleotide" refers to recombinant or synthetically produced polymeric deoxyribonucleotides or their analogues, or modified polynucleotides. This term includes double-stranded and single-stranded DNA or RNA. Polynucleotides can be integrated into, for example, small loops, plasmids, visceral particles, small chromosomes, or artificial chromosomes. Polynucleotides can also be isolated from or integrated into another nucleic acid molecule, such as in expression vectors or chromosomes of eukaryotic host cells.
本文中使用的术语“载体”是指能够传播与其连接的核酸分子的核酸分子。该术语还包括质粒(非病毒)和病毒载体。某些载体能够指导它们可操作连接的核酸或多核苷酸的表达。这种载体在本文中称为“表达载体”。可通过将编码至少一种感兴趣蛋白(POI)的多核苷酸序列插入合适的载体骨架来构建用于真核用途的表达载体。载体骨架可以包括必要的元件,以确保载体的维持,并且如果需要的话,在宿主内提供扩增。对于病毒载体,例如慢病毒或逆转录病毒载体,可能需要进一步的病毒特异性元件,例如结构元件或其他元件,这些元件在本领域中是众所周知的。这些元件可以例如以顺式(在同一质粒上)或反式(在单独的质粒上)提供。病毒载体可能需要辅助病毒或包装线进行大规模转染。载体可包含其他元件,例如增强子元件(例如,病毒、真核细胞)、内含子和用于在哺乳动物细胞中复制的质粒复制的病毒起源。根据本发明,表达载体通常具有驱动POI表达的启动子序列。POI和/或选择性标志物蛋白的表达可以是组成性的或调节性的(例如,通过添加或去除小分子诱导剂来诱导)。哺乳动物宿主细胞表达的优选调节序列包括指导哺乳动物细胞中POI高水平表达的病毒元件,例如源自巨细胞病毒(CMV)、猿猴病毒40(SV40)、腺病毒(例如腺病毒主要晚期启动子Ad-LP)或多瘤的调节元件、启动子和/或增强子。有关病毒调节元件及其序列的进一步描述,请参见例如U.S.5,168,062,U.S.4,510,245和U.S.4,968,615。As used herein, the term "vector" refers to a nucleic acid molecule capable of propagating a nucleic acid molecule linked thereto. The term also includes plasmids (non-viral) and viral vectors. Certain vectors are capable of directing the expression of the nucleic acids or polynucleotides to which they are operatively linked. Such vectors are referred to herein as "expression vectors." Expression vectors for eukaryotic use can be constructed by inserting a polynucleotide sequence encoding at least one protein of interest (POI) into a suitable vector backbone. The vector backbone may include necessary elements to ensure the maintenance of the vector and, if desired, to provide amplification within the host. For viral vectors, such as lentiviral or retroviral vectors, further virus-specific elements, such as structural elements or other elements well known in the art, may be required. These elements may be provided, for example, in cis (on the same plasmid) or trans (on separate plasmids). Viral vectors may require auxiliary viruses or packaging lines for large-scale transfection. Vectors may contain other elements, such as enhancer elements (e.g., viruses, eukaryotic cells), introns, and viral origins for plasmid replication in mammalian cells. According to the invention, expression vectors typically have a promoter sequence that drives POI expression. Expression of POIs and/or selective marker proteins can be constitutive or regulatory (e.g., induced by the addition or removal of small molecule inducers). Preferred regulatory sequences for expression in mammalian host cells include viral elements that direct high levels of POI expression in mammalian cells, such as regulatory elements, promoters, and/or enhancers derived from cytomegalovirus (CMV), simian virus 40 (SV40), adenoviruses (e.g., the adenovirus major late promoter Ad-LP), or polyomas. For further descriptions of viral regulatory elements and their sequences, see, for example, U.S. 5,168,062, U.S. 4,510,245, and U.S. 4,968,615.
本文中使用的术语“接头”或“间隔子”是指能够在两个部分之间实现直接拓扑连接的任何分子。部分尤其可以是多肽、蛋白质、抗体、抗体片段、细胞毒性部分、结合部分、用于检测的部分如荧光团、用于固定或回收的部分如珠或磁珠、反应部分或任何其他分子。这两个部分可以是相同类型或不同的。接头可能是缀合物的一部分,甚至可能有助于其功能。例如,对于包含多肽和生物素的缀合物,在生物素的羧基和肽的第一个大体积氨基酸之间存在约(约5个原子)的间隔子允许生物素到达(strept)亲和素结合袋。各种接头在本领域中是已知的,并且可以基于要连接的部分来选择。接头长度通常在4个原子和200个以上原子之间。长度超过60个原子的接头通常包括具有平均长度的化合物群。As used herein, the term "connector" or "spacer" refers to any molecule capable of achieving a direct topological connection between two parts. Parts can be, in particular, peptides, proteins, antibodies, antibody fragments, cytotoxic parts, binding parts, detection parts such as fluorophores, immobilization or recovery parts such as beads or magnetic beads, reactive parts, or any other molecule. The two parts can be of the same type or different. The connector may be part of a conjugate and may even contribute to its function. For example, in a conjugate containing a peptide and biotin, a spacer of about 5 atoms between the carboxyl group of biotin and the first bulky amino acid of the peptide allows biotin to reach (strept) the avidin binding bag. Various connectors are known in the art and can be selected based on the parts to be connected. Connector lengths are typically between 4 atoms and more than 200 atoms. Connectors longer than 60 atoms typically comprise groups of compounds with an average length.
“多肽接头”可以通过酰胺连接或任何其他功能残基连接。多肽的接头可以连接多肽的N端或C端,或者可以通过反应性官能团或氨基酸侧链连接。多肽可以例如与生物素、蛋白质如人血清白蛋白(HSA)、载体蛋白如keyhole limpet hemocyanin(KLH)、卵清蛋白(OVA)或牛血清白蛋白(BSA)、荧光染料、短氨基酸序列如Flag标签、HA标签、Myc标签或His标签、反应性标签如马来酰亚胺、碘乙酰胺、烷基卤化物、3-巯基丙基或4-叠氮丁酸,或连接到各种其它合适的部分。合适的接头的非限制性实例,例如用于多肽的偶联,包括β-丙氨酸、4-氨基丁酸(GABA)、(2-氨基乙氧基)乙酸(AEA)、5-氨基戊酸(Ava)、6-氨基己酸(Ahx)、PEG2间隔子(8-氨基-3,6-二氧杂辛酸)、PEG3间隔子(12-氨基-4,7,10-三氧杂十二烷酸)、PEG4间隔子(15-氨基-4,8,10,13-四氧杂五-癸酸),和Ttds(三恶十三烷琥珀酰胺酸)。在一些情况下,接头可衍生自反应性部分,例如马来酰亚胺、碘代乙酰胺、烷基卤化物、3-巯基丙基或4-叠氮丁酸。在一些情况下,接头可包括聚乙二醇(PEG)、聚丙二醇、聚氧化烯、或聚乙二醇或聚丙二醇的共聚物。"Peptide linkers" can be linked via amide linkages or any other functional residues. Peptide linkers can connect to the N-terminus or C-terminus of the peptide, or via reactive functional groups or amino acid side chains. Peptides can be linked to, for example, biotin, proteins such as human serum albumin (HSA), carrier proteins such as keyhole limpet hemocyanin (KLH), ovalbumin (OVA), or bovine serum albumin (BSA), fluorescent dyes, short amino acid sequences such as Flag tags, HA tags, Myc tags, or His tags, reactive tags such as maleimide, iodoacetamide, alkyl halides, 3-mercaptopropyl or 4-azidobutyric acid, or various other suitable moieties. Non-limiting examples of suitable linkers, such as those used for peptide coupling, include β-alanine, 4-aminobutyric acid (GABA), (2-aminoethoxy)acetic acid (AEA), 5-aminovaleric acid (Ava), 6-aminohexanoic acid (Ahx), PEG2 spacers (8-amino-3,6-dioxanoic acid), PEG3 spacers (12-amino-4,7,10-trioxadodecanoic acid), PEG4 spacers (15-amino-4,8,10,13-tetraoxapentadecanoic acid), and Ttds (trioxadecanosuccinic acid). In some cases, the linker may be derived from a reactive moiety, such as maleimide, iodoacetamide, alkyl halides, 3-mercaptopropyl, or 4-azidobutyric acid. In some cases, the linker may comprise polyethylene glycol (PEG), polypropylene glycol, polyoxyethylene, or copolymers of polyethylene glycol or polypropylene glycol.
“抗体接头”是指在不同抗体部分之间建立共价连接的接头,包括肽接头和非蛋白质聚合物,包括但不限于聚乙二醇(PEG)、聚丙二醇、聚氧化烯或聚乙二醇、聚丙醇的共聚物。"Antibody adapters" refer to adapters that establish covalent links between different antibody moieties, including peptide adapters and non-protein polymers, including but not limited to polyethylene glycol (PEG), polypropylene glycol, polyoxyethylene, or copolymers of polyethylene glycol and polypropylene alcohol.
“治疗”受试者的疾病或“治疗”患有疾病的受试者是指对受试者进行药物治疗,例如施用药物,以减少或防止疾病的至少一种症状恶化。"Treating" a subject's disease or "treating" a subject with a disease means administering medication to the subject, such as administering a drug to reduce or prevent the worsening of at least one symptom of the disease.
术语“预防(prevent/preventing/prevention)”等指的是减少受试者患疾病、障碍或病症的概率,所述受试者没有疾病、障碍或者病症,但有患疾病、病症或病症的风险或易患疾病、紊乱或者病症。The term “preventing” refers to reducing the probability of a subject having a disease, disorder, or symptom, even if the subject does not have a disease, disorder, or symptom but is at risk or susceptible to such a disease, disorder, or symptom.
术语“有效量”或“治疗有效量”在本文中可互换使用,指的是足以达到特定生物学结果或调节或改善受试者症状或症状发作时间的量,通常为至少约10%;通常至少约20%,优选至少约30%,或更优选至少约50%。可以基于肿瘤负荷的变化来评估抗体在癌症治疗中的使用效果。肿瘤收缩(客观反应)和疾病进展的时间都是癌症临床试验的重要终点。标准化应答标准,即RECIST(实体瘤应答评估标准)于2000年发布。2009年发布了更新(RECIST1.1)。RECIST标准通常用于以客观应答为主要研究终点的临床试验,以及评估稳定疾病、进行肿瘤进展或进展时间分析的试验,因为这些结果测量基于对解剖肿瘤负荷及其在试验过程中的变化的评估。特定受试者的有效剂量可能因治疗条件、受试者整体健康、施用方法、途径和剂量以及副作用严重程度等因素而异。当组合时,有效量与组分的组合成比例,并且效果不限于单独的组分。The terms “effective dose” or “therapeutic effective dose” are used interchangeably herein and refer to an amount sufficient to achieve a specific biological outcome or to modulate or improve symptoms or symptom onset time in a subject, typically at least about 10%; typically at least about 20%, preferably at least about 30%, or more preferably at least about 50%. The effectiveness of antibody use in cancer treatment can be assessed based on changes in tumor burden. Tumor shrinkage (objective response) and time to disease progression are important endpoints in cancer clinical trials. The standardized response criteria, RECIST (Responsiveness Evaluation Criteria for Solid Tumors), were published in 2000. An update (RECIST 1.1) was published in 2009. RECIST criteria are commonly used in clinical trials where objective response is the primary endpoint, as well as in trials assessing stable disease, tumor progression, or time to progression, because these outcome measurements are based on an assessment of anatomical tumor burden and its changes during the trial. The effective dose for a specific subject may vary depending on factors such as treatment conditions, the subject's overall health, method of administration, route and dose, and severity of side effects. When combined, the effective dose is proportional to the combination of components, and the effect is not limited to the individual components.
如果未另行定义,“完全缓解”(CR)定义为所有靶病变消失。任何病理性淋巴结(无论是目标淋巴结还是非目标淋巴结)必须在短轴上减少至<10mm。对于“部分缓解”(PR),必须达到目标病变直径之和的至少30%的减少,以基准总直径为参考。对于“进展性疾病”(PD),以研究中最小的总和作为参考,目标病变直径总和至少增加20%(如果研究中最小,则包括基线总和)。除了相对增加20%外,总和还必须显示出至少5mm的绝对增加。在“稳定疾病”(SD)中,没有观察到足够的收缩以符合PR的要求,也没有观察到充分的增加以符合PD的要求,将研究期间的最小总和直径作为参考。Unless otherwise defined, “complete remission” (CR) is defined as the disappearance of all target lesions. Any pathological lymph nodes (whether target or non-target) must be reduced to <10 mm on the short axis. For “partial remission” (PR), a reduction of at least 30% of the sum of the diameters of the target lesions must be achieved, with reference to the baseline total diameter. For “progressive disease” (PD), the sum of the diameters of the target lesions must increase by at least 20% (including the baseline sum if the smallest sum is observed in the study) with reference to the smallest sum in the study. In addition to a relative increase of 20%, the sum must also show an absolute increase of at least 5 mm. In “stable disease” (SD), no sufficient contraction is observed to meet the requirements for PR, nor is a sufficient increase observed to meet the requirements for PD, with reference to the smallest sum diameter during the study period.
可用于确定本文所述的本发明抗体的治疗益处的次要结果测量包括以下内容:“客观缓解率”(ORR)定义为实现完全缓解(CR)或部分缓解(PR)的受试者比例。“无进展生存期”(PFS)定义为从抗体的第一次给药日期到疾病进展或死亡的时间,以先发生者为准。“总生存期”(OS)是指从疾病诊断之日或开始治疗之日起,被诊断患有该疾病的患者仍然活着的时间长度。“总体缓解持续时间”(DOR)定义为从参与者的初始CR或PR到疾病进展的时间。“缓解深度”(DpR)定义为与基线肿瘤负荷相比,在最大反应点观察到的肿瘤收缩百分比。ORR和PFS的临床终点可根据上述RECIST 1.1标准确定。Secondary outcome measures that may be used to determine the therapeutic benefit of the antibodies of the present invention described herein include the following: "Objective Response Rate" (ORR) is defined as the proportion of subjects achieving a complete response (CR) or partial response (PR). "Progression-Free Survival" (PFS) is defined as the time from the date of first administration of the antibody to disease progression or death, whichever occurs first. "Overall Survival" (OS) is the length of time a patient diagnosed with the disease remains alive from the date of diagnosis or the start of treatment. "Duration of Overall Response" (DOR) is defined as the time from a participant's initial CR or PR to disease progression. "Depth of Response" (DpR) is defined as the percentage of tumor shrinkage observed at the point of maximum response compared to baseline tumor burden. The clinical endpoints of ORR and PFS can be determined according to the RECIST 1.1 criteria described above.
在分析非人受试者的情况下,必须如本文其他地方所讨论的那样调整用于确定治疗效果和益处的上述参数,参见实施例12ff。In the case of analyzing non-human subjects, the parameters described above used to determine therapeutic effects and benefits must be adjusted as discussed elsewhere in this document, see Example 12ff.
根据本发明的典型“受试者”包括人类和非人类受试者。受试者可以是哺乳动物,如小鼠、大鼠、猫、狗、灵长类动物和/或人类。Typical "subjects" according to the present invention include human and non-human subjects. Subjects can be mammals, such as mice, rats, cats, dogs, primates, and/or humans.
抗体、片段或缀合物的“药物组合物”(也称为“治疗制剂”)可通过将具有所需纯度的抗体与可选的生理学可接受的载体、赋形剂或稳定剂混合来制备,例如根据Remington′sPharmaceutical Sciences(18th ed.;Mack Pub.Co.:Eaton,Pa.,1990),例如以冻干制剂或水溶液的形式。可接受的载体、赋形剂或稳定剂在所用剂量和浓度下对受体无毒,包括缓冲液,如磷酸盐、柠檬酸盐和其他有机酸;抗氧化剂,包括抗坏血酸和蛋氨酸;防腐剂(如十八烷基二甲基苄基氯化铵;六甲基氯化铵;苯扎氯铵、苯扎氯胺;苯酚、丁醇或苄醇;对羟基苯甲酸酯烷基酯,如对羟基苯磺酸甲酯或丙酯;邻苯二酚;间苯二酚;环己醇;3-戊醇;间甲酚);低分子量(少于约10个残基)多肽;蛋白质,如血清白蛋白、明胶或免疫球蛋白;亲水聚合物如聚乙烯吡咯烷酮;氨基酸,如甘氨酸、谷氨酰胺、天冬酰胺、组氨酸、精氨酸或赖氨酸;单糖、二糖和其他碳水化合物,包括葡萄糖、甘露糖或糊精;螯合剂如EDTA;糖如蔗糖、甘露醇、海藻糖或山梨醇;形成盐的抗衡离子如钠;金属络合物(例如Zn蛋白络合物);和/或非离子表面活性剂如或聚乙二醇(PEG)。A “pharmaceutical composition” (also known as a “therapeutic formulation”) of an antibody, fragment, or conjugate can be prepared by mixing an antibody of desired purity with an optional physiologically acceptable carrier, excipient, or stabilizer, for example, according to Remington’s Pharmaceutical Sciences (18th ed.; Mack Pub. Co.: Eaton, Pa., 1990), in the form of a lyophilized formulation or an aqueous solution. Acceptable carriers, excipients, or stabilizers are non-toxic to the receptor at the dose and concentration used and include buffers such as phosphates, citrates, and other organic acids; antioxidants, including ascorbic acid and methionine; preservatives (such as octadecyl dimethyl benzyl ammonium chloride; hexamethyl ammonium chloride; benzalkonium chloride, benzalkonium chloride; phenol, butanol, or benzyl alcohol; alkyl esters of parabens, such as methyl or propyl paraben sulfonate; catechol; resorcinol; cyclohexanol; 3-pentanol; m-cresol); and low molecular weight (less than about 10 residues). Polypeptides; proteins, such as serum albumin, gelatin, or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids, such as glycine, glutamine, asparagine, histidine, arginine, or lysine; monosaccharides, disaccharides, and other carbohydrates, including glucose, mannose, or dextrin; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose, or sorbitol; counterions that form salts, such as sodium; metal complexes (e.g., Zn protein complexes); and/or nonionic surfactants such as polyethylene glycol (PEG).
“宿主细胞”是用来接收、维持、繁殖和扩增载体的细胞。宿主细胞也可用于表达多肽,例如由载体编码的抗体或其片段。当宿主细胞分裂时,载体中包含的核酸被复制,从而扩增核酸。优选的宿主细胞是哺乳动物细胞,例如CHO细胞或HEK细胞。进一步优选的宿主细胞是大鼠骨髓瘤YB2/0细胞。A “host cell” is a cell used to receive, maintain, reproduce, and amplify a vector. Host cells can also be used to express polypeptides, such as antibodies or fragments thereof encoded by the vector. When a host cell divides, the nucleic acids contained in the vector are replicated, thereby amplifying the nucleic acids. Preferred host cells are mammalian cells, such as CHO cells or HEK cells. Further preferred host cells are rat myeloma YB2/0 cells.
“具有内源性靶表达的细胞”是指在与生理或疾病情况相当的水平上表达靶蛋白的细胞。通常,经过过表达工程化改造的细胞表达的靶蛋白水平要高得多。"Cells with endogenous target expression" refers to cells that express target proteins at levels comparable to physiological or disease conditions. Typically, engineered cells that have been overexpressed express target proteins at much higher levels.
在细胞、结构、蛋白质、抗体或标志物的上下文中,术语“瘤内”、“瘤内的”、“肿瘤浸润的”或“肿瘤的”是指它们在肿瘤组织中的定位。In the context of cells, structures, proteins, antibodies, or markers, the terms “intratumoral,” “within tumor,” “tumor-infiltrating,” or “tumor-related” refer to their location within tumor tissue.
对某种标志物或蛋白质“阳性”或“+”的细胞是以该标志物或蛋白的大量表达为特征的细胞。标志物或蛋白质表达可以如本领域已知的那样测定和定量,例如定义不同的细胞群体。对于(免疫)细胞群的表征,标志物表达可以通过FACS或使用本文所述的任何其他技术来确定。Cells that are “positive” or “+” for a certain marker or protein are characterized by the high expression of that marker or protein. Marker or protein expression can be determined and quantified as is known in the art, for example, by defining different cell populations. For the characterization of (immune) cell populations, marker expression can be determined by FACS or using any other techniques described herein.
“白细胞”是表达CD45的免疫细胞。本文所用的“CD45+细胞”是指所有白细胞。CD45可作为区分免疫细胞和非免疫细胞的标志物。"White blood cells" are immune cells that express CD45. In this article, "CD45+ cells" refers to all white blood cells. CD45 can serve as a marker to distinguish between immune cells and non-immune cells.
术语“淋巴细胞”是指所有未成熟、成熟、未分化和分化的白淋巴细胞群体,包括组织特异性和特殊性品种。作为非限制性实例,它包括B细胞、T细胞、NKT细胞和NK细胞。在一些实施方式中,淋巴细胞包括所有B细胞谱系,包括前B细胞、祖B细胞、早期前-B细胞、晚期前-B细胞,大前-B细胞和小前-B细胞以及未成熟B细胞、成熟B细胞、血浆B细胞、记忆B细胞、B-1细胞、B-2细胞和无能AN1/T3细胞群。The term "lymphocyte" refers to all immature, mature, undifferentiated, and differentiated white lymphocyte populations, including tissue-specific and specialty varieties. As a non-limiting example, it includes B cells, T cells, NKT cells, and NK cells. In some embodiments, lymphocytes include all B cell lineages, including pre-B cells, progenitor B cells, early pre-B cells, late pre-B cells, large pre-B cells, and small pre-B cells, as well as immature B cells, mature B cells, plasma B cells, memory B cells, B-1 cells, B-2 cells, and apoptotic AN1/T3 cell populations.
“T细胞”是表达TCRαβ、CD3和CD8或CD4的免疫细胞。如本文所用,该术语包括幼稚T细胞、CD4+T细胞、CD8+T细胞,调节性T细胞、记忆T细胞、激活的T细胞、无能T细胞、耐受T细胞、嵌合B细胞和抗原特异性T细胞以及本领域已知的其他T细胞群体,细胞表面上T细胞受体(TCR)的存在将T细胞与其他淋巴细胞区分开来。"T cells" are immune cells that express TCRαβ, CD3, and CD8 or CD4. As used herein, the term includes naive T cells, CD4+ T cells, CD8+ T cells, regulatory T cells, memory T cells, activated T cells, apotent T cells, tolerant T cells, chimeric B cells, and antigen-specific T cells, as well as other T cell populations known in the art. The presence of T cell receptors (TCRs) on the cell surface distinguishes T cells from other lymphocytes.
“CD8+T细胞”(也称为“细胞毒性T细胞”、“TC”、“细胞毒性T淋巴细胞”、“CTL”、“T杀伤细胞”、“细胞溶解性T细胞”、”CD8+T淋巴细胞“或”杀伤性T细胞”)是表达CD3、CD45和CD8的T细胞。CD8+T可以杀死癌细胞、被感染的细胞(特别是被病毒感染的细胞)或其他受损细胞。CD8+ T cells (also known as cytotoxic T cells, TC, cytotoxic T lymphocytes, CTL, T killer cells, cytolytic T cells, CD8+ T lymphocytes, or killer T cells) are T cells that express CD3, CD45, and CD8. CD8+ T cells can kill cancer cells, infected cells (especially those infected by viruses), or other damaged cells.
“CD4+T细胞”(也称为“辅助性T细胞”、“Th细胞”)是表达CD3、CD4和CD45的免疫细胞。辅助性T细胞有几个亚群,例如但不限于Th1、Th2和Th17。CD4+T淋巴细胞有助于抑制或调节免疫反应。它们在B细胞抗体类别转换、细胞毒性T细胞的激活和生长以及最大化吞噬细胞(如巨噬细胞)的杀菌活性中至关重要。CD4+ T cells (also known as helper T cells or Th cells) are immune cells that express CD3, CD4, and CD45. Helper T cells have several subsets, including, but not limited to, Th1, Th2, and Th17. CD4+ T lymphocytes help suppress or regulate immune responses. They are crucial in B cell antibody class switching, the activation and growth of cytotoxic T cells, and maximizing the bactericidal activity of phagocytes such as macrophages.
如本文所用,术语“Treg细胞”(也称为“Tregs”、“调节性T细胞”、“T调节性细胞”、“抑制性T细胞”)是指表达CD3、CD4、CD45和FoxP3的免疫细胞,此外还表达高水平的CD25和低水平的CD127。Treg细胞的鉴定可如本文其他地方所述进行。Treg细胞通常也表达高水平的CTLA-4、GITR和LAG-3。在文献中,Treg还根据记忆标志物CD45RO进行了分类。As used herein, the term "Treg cell" (also known as "Tregs," "regulatory T cells," "T regulatory cells," or "suppressive T cells") refers to immune cells that express CD3, CD4, CD45, and FoxP3, in addition to high levels of CD25 and low levels of CD127. Identification of Treg cells can be performed as described elsewhere in this document. Treg cells also typically express high levels of CTLA-4, GITR, and LAG-3. In the literature, Tregs have also been classified based on the memory marker CD45RO.
在生理条件下,Treg细胞保持免疫耐受。在免疫应答过程中,Treg细胞停止T细胞介导的免疫,并抑制胸腺内逃脱阴性选择的自身反应性T细胞。Treg细胞还可以抑制其他类型的免疫细胞,如NK细胞和B细胞。适应性Treg细胞(称为Th3或Tr1细胞)被认为是在免疫应答期间产生的。Under physiological conditions, Treg cells maintain immune tolerance. During the immune response, Treg cells cease T cell-mediated immunity and suppress autoreactive T cells in the thymus that escape negative selection. Treg cells can also suppress other types of immune cells, such as NK cells and B cells. Adaptive Treg cells (called Th3 or Tr1 cells) are thought to be generated during the immune response.
Treg细胞还通过抑制抗肿瘤免疫在免疫逃逸中发挥重要作用,从而提供免疫耐受环境。识别癌细胞的T细胞通常在肿瘤中大量存在,但其细胞毒性功能被附近的免疫抑制细胞抑制。Tregs在许多不同的癌症中都很丰富,在肿瘤微环境中高度富集,并因其在肿瘤进展中的作用而广为人知。Treg cells also play a crucial role in immune escape by suppressing anti-tumor immunity, thereby providing an environment of immune tolerance. T cells that recognize cancer cells are typically abundant in tumors, but their cytotoxic function is suppressed by nearby immunosuppressive cells. Tregs are abundant in many different cancers, highly enriched in the tumor microenvironment, and are well-known for their role in tumor progression.
“激活的Treg细胞”表达CD4、CD45、FoxP3、CD69和CCR8,此外,CD25高表达,CD127低表达。CD69是T细胞激活标志物。Activated Treg cells express CD4, CD45, FoxP3, CD69, and CCR8. In addition, CD25 is highly expressed, while CD127 is poorly expressed. CD69 is a marker of T cell activation.
“CCR8阳性调节性T细胞”或“CCR8+调节性T淋巴细胞”是表达CCR8的Tregs。“CCR8-positive regulatory T cells” or “CCR8+ regulatory T lymphocytes” are Tregs that express CCR8.
“CD4conv细胞”是传统的CD4+、CD25-T细胞。"CD4conv cells" are traditional CD4+, CD25- T cells.
“γδT细胞”是在其表面表达独特的T细胞受体TCRγδ的T细胞。γδT细胞也表达CD3。"γδT cells" are T cells that express the unique T cell receptor TCRγδ on their surface. γδT cells also express CD3.
“B细胞”是表达CD19的免疫细胞,成熟的B细胞表达CD20和CD22。通过CD40激活后,B细胞发生分化,发生体细胞超突变和增强的免疫球蛋白类转换,形成成熟的B淋巴细胞或浆细胞(能够分泌Abs)。B细胞参与适应性免疫系统的体液免疫,是抗原呈递细胞。B cells are immune cells that express CD19, while mature B cells express CD20 and CD22. Upon activation by CD40, B cells differentiate, undergoing somatic hypermutation and enhanced immunoglobulin conversion, forming mature B lymphocytes or plasma cells (capable of secreting antibodies). B cells participate in humoral immunity within the adaptive immune system and are antigen-presenting cells.
“巨噬细胞”是表达低CD14、高CD16、CD11b、CD68、CD163和CD206的免疫细胞。巨噬细胞通过吞噬作用吞噬和消化细胞碎片、外来物质、微生物或癌细胞。除了吞噬作用,巨噬细胞在先天免疫中起着关键作用,并通过招募其他免疫细胞来帮助启动适应性免疫。例如,巨噬细胞作为T细胞的抗原呈递者很重要。促进炎症的巨噬细胞被称为M1巨噬细胞,而减少炎症并促进组织修复的巨噬细胞则被称为M2巨噬细胞。Macrophages are immune cells that express low levels of CD14 and high levels of CD16, CD11b, CD68, CD163, and CD206. Macrophages engulf and digest cellular debris, foreign substances, microorganisms, or cancer cells through phagocytosis. In addition to phagocytosis, macrophages play a crucial role in innate immunity and help initiate adaptive immunity by recruiting other immune cells. For example, macrophages are important as antigen presenters for T cells. Macrophages that promote inflammation are called M1 macrophages, while those that reduce inflammation and promote tissue repair are called M2 macrophages.
如本文所用,“M1巨噬细胞”是表达ACOD1的巨噬细胞的子集。M1巨噬细胞具有促炎、杀菌和吞噬功能。As used in this article, "M1 macrophages" are a subset of macrophages that express ACOD1. M1 macrophages have pro-inflammatory, bactericidal, and phagocytic functions.
如本文所用,“M2巨噬细胞”是表达MRC1(CD206)的巨噬细胞的子集。M2巨噬细胞分泌抗炎性白细胞介素,在伤口愈合中发挥作用,是血运重建和上皮细胞再分化所需的。肿瘤相关巨噬细胞主要具有M2表型,似乎积极促进肿瘤生长。As used in this article, “M2 macrophages” are a subset of macrophages that express MRC1 (CD206). M2 macrophages secrete anti-inflammatory interleukins, play a role in wound healing, and are required for revascularization and epithelial cell redifferentiation. Tumor-associated macrophages predominantly possess the M2 phenotype and appear to actively promote tumor growth.
“树突状细胞”(DC)是骨髓来源的白细胞,是最有效的抗原呈递细胞。树突状细胞专门用于捕获和处理抗原,将蛋白质转化为T细胞识别的主要组织相容性复合体(MHC)分子上的肽。如本文所定义,DC的特征在于CD1c、CD14、CD16、CD141、CD11c和CD123的表达。存在不同的树突状细胞亚群。在人类中,DC1是免疫原性的,而DC2细胞是耐受性的。成熟DC表达CD83,而浆细胞样DC表达CD123。Dendritic cells (DCs) are bone marrow-derived leukocytes and are the most efficient antigen-presenting cells. Dendritic cells are specialized for capturing and processing antigens, converting proteins into peptides on the major histocompatibility complex (MHC) molecule recognized by T cells. As defined herein, DCs are characterized by the expression of CD1c, CD14, CD16, CD141, CD11c, and CD123. Different dendritic cell subsets exist. In humans, DC1 is immunogenic, while DC2 cells are tolerant. Mature DCs express CD83, while plasmacytoid DCs express CD123.
“NK细胞”(也是自然杀伤细胞)是表达CD45、CD16、CD56、NKG2D但CD3阴性的免疫细胞。NK细胞不需要激活来杀死缺失MHC1类“自身”标志物的细胞。NCR1(也称为CD335或NKp46)在NK细胞和NKT细胞的子集上表达。NK cells (also known as natural killer cells) are immune cells that express CD45, CD16, CD56, and NKG2D but are CD3 negative. NK cells do not require activation to kill cells lacking the MHC1 class of "self" markers. NCR1 (also known as CD335 or NKp46) is expressed on a subset of NK cells and NKT cells.
“自然杀伤T(NKT)细胞”是一组具有T细胞和自然杀伤细胞特性的异质T细胞。Natural killer T (NKT) cells are a heterogeneous group of T cells that possess characteristics of both T cells and natural killer cells.
“iNKT细胞”(也称为“不变的自然杀伤T细胞”)表达不变的αβTCR(Vα24-Jα18,CD241o)、CD44hi、NK1.1(小鼠)和NKG2D。不变的TCR识别由非多态性MHCI类分子CD1d呈现的糖样蛋白抗原。这些细胞可以通过快速产生大量细胞因子(即IFNg)来影响免疫反应。"iNKT cells" (also known as "invariant natural killer T cells") express invariant αβTCR (Vα24-Jα18, CD241o), CD44hi, NK1.1 (mouse), and NKG2D. The invariant TCR recognizes glyco-like protein antigens presented by the non-polymorphic MHCI class molecule CD1d. These cells can influence immune responses by rapidly producing large amounts of cytokines (i.e., IFNg).
如本领域所知,“效应细胞”是在刺激后主动支持免疫反应的免疫细胞。如本文所用,效应细胞是指表达Fcγ受体的免疫细胞,因此能够介导ADCC或ADCP。效应细胞的非限制性实例是单核细胞、中性粒细胞、肥大细胞,优选巨噬细胞和自然杀伤细胞。As is known in the art, an "effect cell" is an immune cell that actively supports an immune response upon stimulation. As used herein, an effector cell refers to an immune cell that expresses the Fcγ receptor and is therefore capable of mediating ADCC or ADCP. Non-limiting examples of effector cells include monocytes, neutrophils, mast cells, preferably macrophages and natural killer cells.
“三级淋巴结构”是以LTta、LTtb、Cxcr5和Cxcl13表达增加为特征的肿瘤内结构。"Tertiary lymphoid structures" are intratumoral structures characterized by increased expression of LTta, LTtb, Cxcr5, and Cxcl13.
本文中使用的术语“嵌合抗原受体”或“CAR”是指人工T细胞表面受体,其被设计为在免疫效应细胞上表达并特异性结合抗原。CARs可作为过继细胞转移的治疗方法。从患者(血液、肿瘤或腹水)中取出单核细胞并进行修饰,使其表达特定形式抗原的受体。在一些实施方式中,CAR已经以对肿瘤相关抗原的特异性表达。CAR还可包含细胞内激活域、跨膜域和包含肿瘤相关抗原结合区的细胞外域。在一些方面,CAR包括单链可变片段(scFv)融合至CD3ζ跨膜和细胞内结构域。CAR设计的特异性可源自受体(例如肽)的配体。在一些实施方式中,CAR可以通过重定向表达肿瘤相关抗原特异性CAR的单核细胞/巨噬细胞来靶向癌症。As used herein, the term "chimeric antigen receptor" or "CAR" refers to an artificial T-cell surface receptor designed to be expressed on immune effector cells and specifically bind to antigens. CARs can be used as a therapeutic approach for adoptive cell transfer. Monocytes are taken from a patient (blood, tumor, or ascites) and modified to express a receptor for a specific form of antigen. In some embodiments, the CAR is already specifically expressed for tumor-associated antigens. CARs may also include an intracellular activation domain, a transmembrane domain, and an extracellular domain containing a tumor-associated antigen-binding region. In some aspects, CARs include a single-chain variable fragment (scFv) fused to both the CD3ζ transmembrane and intracellular domains. The specificity of the CAR design may be derived from a ligand of the receptor (e.g., a peptide). In some embodiments, CARs can target cancer by redirecting monocytes/macrophages expressing tumor-associated antigen-specific CARs.
剂量方案如本领域已知的那样缩写,例如每天(QD)、每2天(Q2D)或每3天(Q3D)。Dosing regimens are abbreviated as known in the art, such as daily (QD), every 2 days (Q2D), or every 3 days (Q3D).
实施方式Implementation
结合趋化因子受体的抗原和抗体Antigens and antibodies that bind to chemokine receptors
方面1-抗原Aspect 1 - Antigen
根据第一方面,提供了一种分离的硫酸化多肽,其包含七次跨膜受体的富含酪氨酸的结构域(TRD)。富含酪氨酸的结构域是保守的N端结构域,其特征为七次跨膜受体,例如CXC和CC趋化因子受体,参见实施例1。如本文所用,术语TRD指的是CXC或CC趋化蛋白受体位于从N末端计数的第一个半胱氨酸的N端的氨基酸或蛋白质序列。除了酪氨酸,TRD通常包括带负电的氨基酸残基,如天冬氨酸。所有CC和CXC趋化因子受体的TRD列于实施例4表4.1中,适用于小鼠、猴子和人类。According to a first aspect, an isolated sulfated polypeptide is provided comprising a tyrosine-rich domain (TRD) of a seven-transmembrane receptor. The tyrosine-rich domain is a conserved N-terminal domain characterized by a seven-transmembrane receptor, such as CXC and CC chemokine receptors, see Example 1. As used herein, the term TRD refers to the amino acid or protein sequence of the CXC or CC chemokine receptor located at the N-terminus of the first cysteine residue counted from the N-terminus. In addition to tyrosine, the TRD typically includes negatively charged amino acid residues, such as aspartic acid. The TRDs of all CC and CXC chemokine receptors are listed in Table 4.1 of Example 4, applicable to mice, monkeys, and humans.
酪氨酸硫酸化是一种普遍存在的翻译后蛋白质修饰,发生在所有多细胞生物中。它由酪氨酸蛋白硫转移酶(TPSTs)1和2催化,这两种高尔基体驻留酶将硫酸盐从辅因子PAPS(3′-磷酸腺苷5′-磷酸硫酸盐)转移到蛋白质底物中的环境依赖性酪氨酸。目前,只有一小部分硫酸化蛋白质是已知的,对生物硫酸化机制和特定修饰位置的理解仍在进行中,参见实施例4。虽然翻译后修饰,如糖基化、磷酸化、酰化、腺嘌呤化、法尼酰化、泛素化和硫酸化在活系统的蛋白质中很常见,抗体产生通常基于未修饰的靶序列进行。Tyrosine sulfation is a ubiquitous post-translational protein modification that occurs in all multicellular organisms. It is catalyzed by tyrosine protein sulfotransferases (TPSTs) 1 and 2, two Golgi-resident enzymes that transfer sulfate from the cofactor PAPS (3′-phosphoadenosine 5′-phosphate sulfate) to an environment-dependent tyrosine residue in the protein substrate. Currently, only a small fraction of sulfated proteins are known, and the understanding of biological sulfation mechanisms and specific modification sites is ongoing; see Example 4. While post-translational modifications such as glycosylation, phosphorylation, acylation, adenineization, farnesylation, ubiquitination, and sulfation are common in proteins of living systems, antibody production is typically based on unmodified target sequences.
本发明人开发了一种不寻常的抗体生成方法,并惊奇地发现,根据第一方面的合成硫酸化多肽可用于提高趋化因子受体本身的抗体生成成功率,以及具有治疗用途的优异功能性质的趋化因子抗体的成功率,如本文别处所讨论的。高度特异性趋化因子受体抗体的成功率增加尤其令人惊讶,因为设计用于作为翻译后修饰的硫酸化酪氨酸的序列独立检测的研究抗体很少。The inventors have developed an unusual method for antibody generation and surprisingly discovered that the synthesis of sulfated peptides according to the first aspect can improve the success rate of antibody generation for chemokine receptors themselves, as well as the success rate of chemokine antibodies with excellent functional properties for therapeutic use, as discussed elsewhere herein. The increased success rate of highly specific chemokine receptor antibodies is particularly surprising because research antibodies designed for independent detection of sulfated tyrosine residues as post-translational modifications are rare.
七次跨膜受体可以来自表达以TRD为特征的趋化因子受体的任何物种,例如人、猴子、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼。Seven-transmembrane receptors can come from any species that express chemokine receptors characterized by TRD, such as humans, monkeys, macaques (cynomolgus monkeys), rhesus monkeys, rodents, mice, rats, horses, cattle, pigs, dogs, cats, and camels.
根据第一方面的一些第一实施方式,提供了一种分离的多肽,其中所述分离的多肽包含七次跨膜受体的富含酪氨酸的结构域(TRD),其进一步的特征在于TRD的至少25%、至少50%或至少75%的TRD的酪氨酸残基被硫酸化。According to some first embodiments of the first aspect, an isolated polypeptide is provided, wherein the isolated polypeptide comprises a tyrosine-rich domain (TRD) of a seven-transmembrane receptor, further characterized in that at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated.
例如,在高度成功的抗体活动中,人或食蟹猴CCR8的TRD在位置Y3、Y15和Y17被硫酸化,而Y16被省略,即TRD中75%的酪氨酸被硫酸化(表6.1)。在另一个实例中,人CCR4的TRD在19和22位被硫酸化,并用于脱靶结合,即50%的酪氨酸被硫酸化(表8.1)。在另一种方法中,鼠CCR4的TRD在第22位被硫酸化并用于脱靶结合,即TRD中25%的酪氨酸被硫酸化(表6.1)。For example, in highly successful antibody campaigns, the TRD of human or cynomolgus monkey CCR8 was sulfated at positions Y3, Y15, and Y17, while Y16 was omitted, meaning 75% of the tyrosine residues in the TRD were sulfated (Table 6.1). In another example, the TRD of human CCR4 was sulfated at positions 19 and 22 for off-target binding, meaning 50% of the tyrosine residues in the TRD were sulfated (Table 8.1). In yet another approach, the TRD of mouse CCR4 was sulfated at position 22 for off-target binding, meaning 25% of the tyrosine residues in the TRD were sulfated (Table 6.1).
表4.1显示了硫酸化肽的列表,其包括酪氨酸硫酸化的优选位置。在不受理论束缚的情况下,本发明人认为,酪氨酸硫酸盐形式的额外电荷的引入使抗体能够识别特定的负电荷模式。这种识别似乎需要至少在抗体的HCDR3中增加酪氨酸和带正电荷氨基酸的百分比,即,根据本发明的分离的硫酸化多肽的使用也影响了抗体的结构组成,特别是HCDR3的氨基酸组成,参见实施例9。Table 4.1 shows a list of sulfated peptides, including preferred positions of tyrosine sulfate. Without being bound by theory, the inventors believe that the introduction of the additional charge in the form of tyrosine sulfate enables the antibody to recognize specific negatively charged patterns. This recognition appears to require at least an increase in the percentage of tyrosine and positively charged amino acids in the antibody's HCDR3; that is, the use of the isolated sulfated peptides according to the invention also affects the structural composition of the antibody, particularly the amino acid composition of HCDR3, see Example 9.
根据第一方面的一些第二实施方式,其可以与第一方面的第一实施方式相同或不同,提供了一种分离的多肽,其中所述七次跨膜受体是人、食蟹猴或小鼠。According to some second embodiments of the first aspect, which may be the same as or different from the first embodiment of the first aspect, a separate polypeptide is provided, wherein the seven-transmembrane receptor is human, cynomolgus monkey or mouse.
在这些第二实施方式中的一些中,七次跨膜受体是鼠的。在这些第二实施方式中的一些优选实施方式中,七次跨膜受体是人和/或食蟹猴。在这些第二实施方式中的一些优选实施方式中,七次跨膜受体是人的。在这些第二实施方式中的一些中,七次跨膜受体是食蟹猴。In some of these second embodiments, the seven-transmembrane receptor is mouse. In some preferred embodiments of these second embodiments, the seven-transmembrane receptor is human and/or cynomolgus monkey. In some preferred embodiments of these second embodiments, the seven-transmembrane receptor is human. In some of these second embodiments, the seven-transmembrane receptor is cynomolgus monkey.
根据第一方面的一些第三实施方式,其可以与第一方面的第一和/或第二实施方式相同或不同,提供了一种分离的多肽,其中所述七次跨膜受体是趋化因子受体,优选地According to some third embodiments of the first aspect, which may be the same as or different from the first and/or second embodiments of the first aspect, a separated polypeptide is provided, wherein the seven-transmembrane receptor is a chemokine receptor, preferably.
a)CC趋化因子受体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9或CCR10,a) CCR chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, or CCR10.
b)CXC趋化因子受体,例如CXCR1、CXCR2、CXCR3、CXCR4、CXCR5或CXCR6,或b) CXC chemokine receptors, such as CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, or CXCR6, or
c)CX3CR1或CXCR1。c) CX3CR1 or CXCR1.
在这些第三实施方式中的一些中,七次跨膜受体是CC趋化因子受体或CXC趋化因子受体。在这些第三实施方式中的一些实施方式中,七次跨膜受体是CC趋化因子受体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9或CCR10。在这些第三实施方式中的某些优选方式中,七次跨膜受体是CCR8或CCR4。在这些第三实施方式中的一些中,七次跨膜受体是CXC趋化因子受体,例如CXCR1、CXCR2、CXCR3、CXCR4、CXCR5或CXCR6。在这些第三实施方式中的一些中,七次跨膜受体是CX3CR1或CXCR1。In some of these third embodiments, the seven-transmembrane receptor is a CC chemokine receptor or a CXC chemokine receptor. In some embodiments of these third embodiments, the seven-transmembrane receptor is a CC chemokine receptor, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, or CCR10. In some preferred embodiments of these third embodiments, the seven-transmembrane receptor is CCR8 or CCR4. In some of these third embodiments, the seven-transmembrane receptor is a CXC chemokine receptor, such as CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, or CXCR6. In some of these third embodiments, the seven-transmembrane receptor is CX3CR1 or CXCR1.
在第一方面的一些优选实施方式中,提供了一种分离的多肽,其包含人或食蟹猴七次跨膜受体的TRD,其特征在于TRD的至少25%、至少50%或至少75%的TRD的酪氨酸残基被硫酸化,其中所述七次跨膜受体是是CC趋化因子受体或CXC趋化因子受体,并优选地,其中七次跨膜受体是CCR8或CCR4。In some preferred embodiments of the first aspect, an isolated polypeptide is provided comprising a human or cynomolgus monkey seven-transmembrane receptor TRD, characterized in that at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated, wherein the seven-transmembrane receptor is a CC chemokine receptor or a CXC chemokine receptor, and preferably, wherein the seven-transmembrane receptor is CCR8 or CCR4.
根据第一方面的第三实施方式的一些实施方式A,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments A of the third embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:1(CCR1_HUMAN_TRD),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 1 (CCR1_HUMAN_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:7(CCR2_HUMAN_TRD),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 7 (CCR2_HUMAN_TRD), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:13(CCR3_HUMAN_TRD),优选地其中Y16和/或Y17已被硫酸化,或c) SEQ ID NO: 13 (CCR3_HUMAN_TRD), preferably wherein Y16 and/or Y17 have been sulfated, or
d)SEQ ID NO:19(CCR4_HUMAN_TRD),优选地其中至少Y22已被硫酸化,并且优选地Y16、Y19和/或Y20已被硫酸化;或d) SEQ ID NO: 19 (CCR4_HUMAN_TRD), preferably wherein at least Y22 has been sulfated, and preferably Y16, Y19 and/or Y20 have been sulfated; or
e)SEQ ID NO:25(CCR5_HUMAN_TRD),优选地其中Y3、Y1 0、Y14和Y15中的两个、三个或全部已被硫酸化,或e) SEQ ID NO: 25 (CCR5_HUMAN_TRD), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f)SEQ ID NO:31(CCR6_HUMAN_TRD),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或f) SEQ ID NO: 31 (CCR6_HUMAN_TRD), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
g)SEQ ID NO:37(CCR7_HUMAN_TRD),优选地其中Y8和Y17中的一个或两个已被硫酸化,或g) SEQ ID NO: 37 (CCR7_HUMAN_TRD), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h)SEQ ID NO:43(CCR8_HUMAN_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 43 (CCR8_HUMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i)SEQ ID NO:61(CCR9_HUMAN_TRD),其中至少Y28和优选地Y17和/或Y37已被硫酸化,或i) SEQ ID NO: 61 (CCR9_HUMAN_TRD), wherein at least Y28 and preferably Y17 and/or Y37 have been sulfated, or
j)SEQ ID NO:67(CCR10_HUMAN_TRD),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j) SEQ ID NO: 67 (CCR10_HUMAN_TRD), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k)SEQ ID NO:73(CXCR1_HUMAN_TRD),优选地其中Y27已被硫酸化,或k)SEQ ID NO: 73(CXCR1_HUMAN_TRD), preferably wherein Y27 has been sulfated, or
1)SEQ ID NO:79(CXCR2_HUMAN_TRD),优选地其中Y23和/或Y25已被硫酸化,或1) SEQ ID NO: 79 (CXCR2_HUMAN_TRD), preferably wherein Y23 and/or Y25 have been sulfated, or
m)SEQ ID NO:85(CXCR3_HUMAN_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 85(CXCR3_HUMAN_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:91(CXCR4_HUMAN_TRD),优选地其中至少Y12和/或Y21已被硫酸化,或n)SEQ ID NO: 91 (CXCR4_HUMAN_TRD), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o)SEQ ID NO:97(CXCR5_HUMAN_TRD),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 97(CXCR5_HUMAN_TRD), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:103(CXCR6_HUMAN_TRD),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 103 (CXCR6_HUMAN_TRD), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
q)SEQ ID NO:157(CX3CR1_HUMAN_TRD),优选地其中至少Y14已被硫酸化,或q)SEQ ID NO: 157(CX3CR1_HUMAN_TRD), preferably wherein at least Y14 has been sulfated, or
r)SEQ ID NO:163(CXCR1_HUMAN_TRD),优选地其中至少Y27已被硫酸化。r)SEQ ID NO: 163(CXCR1_HUMAN_TRD), preferably wherein at least Y27 has been sulfated.
根据第一方面的第三实施方式的一些实施方式B,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments B of the third embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:3(CCR1_MOUSE_TRD),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 3 (CCR1_MOUSE_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:9(CCR2_MOUSE_TRD),优选地其中至少Y37和/或Y39已被硫酸化,或b) SEQ ID NO: 9 (CCR2_MOUSE_TRD), preferably wherein at least Y37 and/or Y39 has been sulfated, or
c)SEQ ID NO:15(CCR3_MOUSE_TRD),优选地其中Y20和/或Y22已被硫酸化,或c) SEQ ID NO: 15 (CCR3_MOUSE_TRD), preferably wherein Y20 and/or Y22 have been sulfated, or
d)SEQ ID NO:21(CCR4_MOUSE_TRD),优选地其中至少Y22已被硫酸化,并且优选地此外Y16、Y19和/或Y20已被硫酸化;或d) SEQ ID NO: 21 (CCR4_MOUSE_TRD), preferably wherein at least Y22 has been sulfated, and preferably in addition, Y16, Y19 and/or Y20 have been sulfated; or
e)SEQ ID NO:27(CCR5_MOUSE_TRD),优选地其中Y1 0、Y12和Y16中的两个或三个已被硫酸化,或e) SEQ ID NO: 27 (CCR5_MOUSE_TRD), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
f)SEQ ID NO:33(CCR6_MOUSE_TRD),优选地其中Y13、Y18和Y19中的两个或三个已被硫酸化,或f) SEQ ID NO: 33 (CCR6_MOUSE_TRD), preferably wherein two or three of Y13, Y18 and Y19 have been sulfated, or
g)SEQ ID NO:39(CCR7_MOUSE_TRD),优选地其中Y8和Y17中的一个或两个以及任选地Y20已被硫酸化,或g) SEQ ID NO: 39 (CCR7_MOUSE_TRD), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
h)SEQ ID NO:45(CCR8_MOUSE_TRD),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 45 (CCR8_MOUSE_TRD), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
i)SEQ ID NO:63(CCR9_MOUSE_TRD),优选地其中至少Y28已被硫酸化,且优选地Y19也已被硫酸化;或i) SEQ ID NO: 63 (CCR9_MOUSE_TRD), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated; or
j)SEQ ID NO:69(CCR1 0_MOUSE_TRD),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或j) SEQ ID NO: 69 (CCR1 0_MOUSE_TRD), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
k)SEQ ID NO:75(CXCR1_MOUSE_TRD),优选地其中至少Y6已被硫酸化,或k)SEQ ID NO: 75(CXCR1_MOUSE_TRD), preferably wherein at least Y6 has been sulfated, or
1)SEQ ID NO:81(CXCR2_MOUSE_TRD),优选地其中Y24已被硫酸化,或1) SEQ ID NO: 81 (CXCR2_MOUSE_TRD), preferably wherein Y24 has been sulfated, or
m)SEQ ID NO:87(CXCR3_MOUSE_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 87 (CXCR3_MOUSE_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:93(CXCR4_MOUSE_TRD),优选地其中至少Y23、Y13和/或Y14已被硫酸化,或n)SEQ ID NO: 93 (CXCR4_MOUSE_TRD), preferably wherein at least Y23, Y13 and/or Y14 have been sulfated, or
o)SEQ ID NO:99(CXCR5_MOUSE_TRD),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或o)SEQ ID NO: 99(CXCR5_MOUSE_TRD), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
p)SEQ ID NO:105(CXCR6_MOUSE_TRD),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 105(CXCR6_MOUSE_TRD), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
q)SEQ ID NO:159(CX3CR1_MOUSE_TRD),优选地其中至少Y15已被硫酸化,或q)SEQ ID NO: 159 (CX3CR1_MOUSE_TRD), preferably wherein at least Y15 has been sulfated, or
r)SEQ ID NO:165(CXCR1_MOUSE_TRD),优选地其中至少Y6已被硫酸化。r)SEQ ID NO: 165(CXCR1_MOUSE_TRD), preferably wherein at least Y6 has been sulfated.
根据第一方面的第三实施方式的一些实施方式C,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments C of the third embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:2(CCR1_MACFA_TRD),优选地其中至少Y1 0和/或Y18已被硫酸化,或a) SEQ ID NO: 2 (CCR1_MACFA_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:8(CCR2_MACMU_TRD),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 8 (CCR2_MACMU_TRD), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:14(CCR3_MACFA_TRD),优选地其中Y16已被硫酸化,或c) SEQ ID NO: 14 (CCR3_MACFA_TRD), preferably wherein Y16 has been sulfated, or
d)SEQ ID NO:20(CCR4_MACFA_TRD),优选地其中至少Y22已被硫酸化,并且优选地Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 20 (CCR4_MACFA_TRD), preferably wherein at least Y22 has been sulfated, and preferably Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:26(CCR5_MACMU_TRD),优选地其中Y3、Y1 0、Y14和Y15中的两个、三个或全部已被硫酸化,或e) SEQ ID NO: 26 (CCR5_MACMU_TRD), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f)SEQ ID NO:32(CCR6_MACFA_TRD),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或f) SEQ ID NO: 32 (CCR6_MACFA_TRD), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
g)SEQ ID NO:38(CCR7_MACFA_TRD),优选地其中Y8和Y17中的一个或两个已被硫酸化,或g) SEQ ID NO: 38 (CCR7_MACFA_TRD), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h)SEQ ID NO:44(CCR8_MACFA_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 44 (CCR8_MACFA_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i)SEQ ID NO:62(CCR9_MACFA_TRD),优选地其中至少Y28,优选地Y17和/或Y37也已被硫酸化,或i) SEQ ID NO: 62 (CCR9_MACFA_TRD), preferably wherein at least Y28, preferably Y17 and/or Y37 have also been sulfated, or
j)SEQ ID NO:68(CCR10_MACFA_TRD),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j) SEQ ID NO: 68 (CCR10_MACFA_TRD), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k)SEQ ID NO:74(CXCR1_MACFA_TRD),优选地其中Y14和Y28中的至少一个已被硫酸化,或k)SEQ ID NO: 74(CXCR1_MACFA_TRD), preferably wherein at least one of Y14 and Y28 has been sulfated, or
1)SEQ ID NO:80(CXCR2_MACFA_TRD),优选地其中Y20和/或Y22已被硫酸化,或1) SEQ ID NO: 80 (CXCR2_MACFA_TRD), preferably wherein Y20 and/or Y22 have been sulfated, or
m)SEQ ID NO:86(CXCR3_MACFA_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 86(CXCR3_MACFA_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:92(CXCR4_MACFA_TRD),优选地其中至少Y12和/或Y21已被硫酸化,或n)SEQ ID NO: 92 (CXCR4_MACFA_TRD), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o)SEQ ID NO:98(CXCR5_MACFA_TRD),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 98(CXCR5_MACFA_TRD), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:104(CXCR6_MACFA_TRD),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或p)SEQ ID NO: 104(CXCR6_MACFA_TRD), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
q)SEQ ID NO:158(CX3CR1_MACFA_TRD),优选地其中至少Y20已被硫酸化,或q)SEQ ID NO: 158 (CX3CR1_MACFA_TRD), preferably wherein at least Y20 has been sulfated, or
r)SEQ ID NO:164(CXCR1_MACMU_TRD),优选地其中至少Y14已被硫酸化。r)SEQ ID NO: 164(CXCR1_MACMU_TRD), preferably wherein at least Y14 has been sulfated.
在第一方面的一些第四实施方式中,其可以与根据第一方面的第一、第二和/或第三实施方式相同或不同,分离的多肽包含含有TRD和LID结构域的七次跨膜受体的N端,优选地,其中至少TRD和LID结构域之间的半胱氨酸已被去除或已被改变为不同的氨基酸。In some fourth embodiments of the first aspect, which may be the same as or different from the first, second and/or third embodiments of the first aspect, the isolated polypeptide comprises the N-terminus of a seven-transmembrane receptor containing TRD and LID domains, preferably wherein at least the cysteine between the TRD and LID domains has been removed or has been changed to a different amino acid.
趋化因子受体的细胞外结构域可分为四个区域:The extracellular domain of chemokine receptors can be divided into four regions:
(i)N端结构域,可细分为(i) The N-terminal structural domain can be further subdivided into
(a)膜远端富含酪氨酸的结构域(TRD),(a) The distal membrane domain rich in tyrosine (TRD),
(b)半胱氨酸,以及(b) Cysteine, and
(c)LID结构域,(c) LID structural domain,
(iii)细胞外结构域1(ECL1),(iii) Extracellular domain 1 (ECL1),
(iii)细胞外结构域2(ECL2),和(iii) Extracellular domain 2 (ECL2), and
(iv)胞外结构域3(ECL3)。(iv) Extracellular domain 3 (ECL3).
根据本发明的一些多肽难以处理,例如由于高聚集倾向。在不受理论束缚的情况下,发明人认为,高“粘性”是由于带电氨基酸和带电硫酸盐残基数量增加所致。对于包含趋化因子受体N端的多肽,可以通过去除TRD和LID结构域之间的半胱氨酸或氨基酸交换来改善聚集特性。通过将半胱氨酸改变为丝氨酸获得最佳结果(实施例5,表4.1)。Some peptides according to the present invention are difficult to process, for example, due to a high tendency to aggregate. Without being bound by theory, the inventors believe that the high “stickiness” is due to an increase in the number of charged amino acid and charged sulfate residues. For peptides containing the N-terminus of a chemokine receptor, aggregation properties can be improved by removing cysteine residues or amino acid exchanges between the TRD and LID domains. Optimal results were obtained by changing cysteine to serine (Example 5, Table 4.1).
在根据第一方面的一些第四实施方式中,可以省略半胱氨酸,并且TRD和LID直接连接。在根据第一方面的一些不同的第四实施方式中,半胱氨酸可以被不同的极性不带电氨基酸取代。在根据第一方面的一些优选的第四实施方式中,半胱氨酸被丝氨酸取代(参见表4.1)。在根据第一方面的一些第四实施方式中,半胱氨酸可以被至少一种不同的氨基酸取代。In some fourth embodiments according to the first aspect, cysteine may be omitted, and TRD and LID are directly linked. In some different fourth embodiments according to the first aspect, cysteine may be replaced by different polar, uncharged amino acids. In some preferred fourth embodiments according to the first aspect, cysteine is replaced by serine (see Table 4.1). In some fourth embodiments according to the first aspect, cysteine may be replaced by at least one different amino acid.
根据第一方面的第四实施方式的一些实施方式A,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments A of the fourth embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:4(CCR1_HUMAN_N term),其中至少Y10和/或Y18已被硫酸化,a) SEQ ID NO: 4 (CCR1_HUMAN_N term), wherein at least Y10 and/or Y18 has been sulfated.
b)SEQ ID NO:10(CCR2_HUMAN_N term),其中至少Y26已被硫酸化,b) SEQ ID NO: 10 (CCR2_HUMAN_N term), wherein at least Y26 has been sulfated.
c)SEQ ID NO:16(CCR3_HUMAN_N term),其中Y16和/或Y17已被硫酸化,c) SEQ ID NO: 16 (CCR3_HUMAN_N term), wherein Y16 and/or Y17 have been sulfated.
d)SEQ ID NO:22(CCR4_HUMAN_N term),其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,d) SEQ ID NO: 22 (CCR4_HUMAN_N term), wherein at least Y22 has been sulfated and preferably Y16, Y19 and/or Y20 have also been sulfated.
e)SEQ ID NO:28(CCR5_HUMAN_N term),其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,e) SEQ ID NO: 28 (CCR5_HUMAN_N term), wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated.
f)SEQ ID NO:34(CCR6_HUMAN_N term),其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,f) SEQ ID NO: 34 (CCR6_HUMAN_N term), wherein at least two or three of Y18, Y26 and Y27 have been sulfated.
g)SEQ ID NO:40(CCR7_HUMAN_N term),其中Y8和Y17中的一个或两个已被硫酸化,g) SEQ ID NO: 40 (CCR7_HUMAN_N term), wherein one or both of Y8 and Y17 have been sulfated.
h)SEQ ID NO:46(CCR8_HUMAN_N term),其中Y3、Y15和Y17的至少两个或全部已被硫酸化,h) SEQ ID NO: 46 (CCR8_HUMAN_N term), wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
i)SEQ ID NO:64(CCR9_HUMAN_N term),其中至少Y28,并且优选地Y17和/或Y37已被硫酸化,i) SEQ ID NO: 64 (CCR9_HUMAN_N term), wherein at least Y28, and preferably Y17 and/or Y37, has been sulfated.
j)SEQ ID NO:70(CCR10_HUMAN_N term),其中Y14和Y22中的至少一个或两个已被硫酸化,j) SEQ ID NO: 70 (CCR10_HUMAN_N term), wherein at least one or both of Y14 and Y22 have been sulfated.
k)SEQ ID NO:76(CXCR1_HUMAN_N term),其中Y27已被硫酸化,k)SEQ ID NO: 76 (CXCR1_HUMAN_N term), where Y27 has been sulfated.
1)SEQ ID NO:82(CXCR2_HUMAN_N term),其中Y23和/或Y25已被硫酸化,1) SEQ ID NO: 82 (CXCR2_HUMAN_N term), wherein Y23 and/or Y25 have been sulfated.
m)SEQ ID NO:88(CXCR3_HUMAN_N term),其中Y27和Y29中的至少一个或两个已被硫酸化,m)SEQ ID NO: 88 (CXCR3_HUMAN_N term), wherein at least one or both of Y27 and Y29 have been sulfated.
n)SEQ ID NO:94(CXCR4_HUMAN_N term),其中至少Y12和/或Y21已被硫酸化,n)SEQ ID NO: 94 (CXCR4_HUMAN_N term), wherein at least Y12 and/or Y21 have been sulfated.
o)SEQ ID NO:100(CXCR5_HUMAN_N term),其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 100(CXCR5_HUMAN_N term), wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:106(CXCR6_HUMAN_N term),其中Y6和Y10中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 106 (CXCR6_HUMAN_N term), wherein at least one or both of Y6 and Y10 have been sulfated, or
q)SEQ ID NO:160(CX3CR1_HUMAN_N term),优选地其中至少Y14已被硫酸化,或q)SEQ ID NO: 160 (CX3CR1_HUMAN_N term), preferably wherein at least Y14 has been sulfated, or
r)SEQ ID NO:166(CXCR1_HUMAN_N term),优选地其中至少Y27已被硫酸化。r)SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated.
根据第一方面的第四实施方式的一些实施方式B,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments B of the fourth embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:6(CCR1_MOUSE_N term),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 6 (CCR1_MOUSE_N term), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:12(CCR2_MOUSE_N term),优选地其中至少Y37和/或Y39已被硫酸化,或b) SEQ ID NO: 12 (CCR2_MOUSE_N term), preferably wherein at least Y37 and/or Y39 has been sulfated, or
c)SEQ ID NO:18(CCR3_MOUSE_N term),优选地其中Y20和/或Y22已被硫酸化,或c) SEQ ID NO: 18 (CCR3_MOUSE_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
d)SEQ ID NO:24(CCR4_MOUSE_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 24 (CCR4_MOUSE_N term), preferably wherein at least Y22 has been sulfated and preferably in addition, Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:30(CCR5_MOUSE_N term),优选地其中Y10、Y12和Y16中的两个或三个已被硫酸化,或e) SEQ ID NO: 30 (CCR5_MOUSE_N term), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
f)SEQ ID NO:36(CCR6_MOUSE_N term),优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,f) SEQ ID NO: 36 (CCR6_MOUSE_N term), preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated.
g)SEQ ID NO:42(CCR7_MOUSE_N term),优选地其中Y8和Y17中的一个或两个以及任选的Y20已被硫酸化,或g) SEQ ID NO: 42 (CCR7_MOUSE_N term), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
h)SEQ ID NO:48(CCR8_MOUSE_N term,C=X或S),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 48 (CCR8_MOUSE_N term, C = X or S), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
i)SEQ ID NO:66(CCR9_MOUSE_N term),优选地其中至少Y28已被硫酸化,并且优选地Y19也已被硫酸化,或i) SEQ ID NO: 66 (CCR9_MOUSE_N term), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated, or
j)SEQ ID NO:72(CCR10_MOUSE_N term),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或j) SEQ ID NO: 72 (CCR10_MOUSE_N term), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
k)SEQ ID NO:78(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化,或k)SEQ ID NO: 78 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated, or
1)SEQ ID NO:84(CXCR2_MOUSE_N term),优选地其中Y24已被硫酸化,或1) SEQ ID NO: 84 (CXCR2_MOUSE_N term), preferably wherein Y24 has been sulfated, or
m)SEQ ID NO:90(CXCR3_MOUSE_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 90 (CXCR3_MOUSE_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:96(CXCR4_MOUSE_N term),优选地其中至少Y23和/或Y14已被硫酸化,或n)SEQ ID NO: 96 (CXCR4_MOUSE_N term), preferably wherein at least Y23 and/or Y14 has been sulfated, or
o)SEQ ID NO:102(CXCR5_MOUSE_N term),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或o)SEQ ID NO: 102 (CXCR5_MOUSE_N term), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
p)SEQ ID NO:108(CXCR6_MOUSE_N term),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 108 (CXCR6_MOUSE_N term), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
q)SEQ ID NO:162(CX3CR1_MOUSE_N term),优选地其中至少Y15已被硫酸化,或q)SEQ ID NO: 162 (CX3CR1_MOUSE_N term), preferably wherein at least Y15 has been sulfated, or
r)SEQ ID NO:168(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化。r)SEQ ID NO: 168 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated.
根据第一方面的第四实施方式的一些实施方式C,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%、95%或98%序列同一性的序列According to some embodiments C of the fourth embodiment of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90%, 95%, or 98% sequence identity with the following sequence.
a)SEQ ID NO:5(CCR1_MACFA_N term),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 5 (CCR1_MACFA_N term), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:11(CCR2_MACMU_N term),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:17(CCR3_MACFA_N term),优选地其中Y16已被硫酸化,或c) SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y16 has been sulfated, or
d)SEQ ID NO:23(CCR4_MACFA_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 23 (CCR4_MACFA_N term), preferably wherein at least Y22 has been sulfated and preferably in addition, Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:29(CCR5_MACMU_N term),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,或e) SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f)SEQ ID NO:35(CCR6_MACFA_N term),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或f) SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
g)SEQ ID NO:41(CCR7_MACFA_N term),优选地其中Y8和Y17中地一个或两个已被硫酸化,或g) SEQ ID NO: 41 (CCR7_MACFA_N term), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h)SEQ ID NO:47(CCR8_MACFA_N term),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 47 (CCR8_MACFA_N term), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i)SEQ ID No:65(CCR9_MACFA_N term),优选地其中至少Y28,并且优选地Y17和/或Y37已被硫酸化,或i) SEQ ID No: 65 (CCR9_MACFA_N term), preferably wherein at least Y28, and preferably Y17 and/or Y37 have been sulfated, or
j)SEQ ID NO:71(CCR10_MACFA_N term),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j) SEQ ID NO: 71 (CCR10_MACFA_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k)SEQ ID NO:77(CXCR1_MACFA_N term),优选地其中Y14和Y28中的至少一个已被硫酸化,或k)SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein at least one of Y14 and Y28 has been sulfated, or
l)SEQ ID NO:83(CXCR2_MACFA_N term),优选地其中Y20和/或Y22已被硫酸化,或l) SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
m)SEQ ID NO:89(CXCR3_MACFA_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 89 (CXCR3_MACFA_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:95(CXCR4_MACFA_N term),优选地其中至少Y12和/或Y21已被硫酸化,或n)SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o)SEQ ID NO:101(CXCR5_MACFA_N term),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:107(CXCR6_MACFA_N term),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或p)SEQ ID NO: 107 (CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
q)SEQ ID NO:161(CX3CR1_MACFA_N term),优选地其中至少Y20或Y22已被硫酸化,或q)SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
r)SEQ ID NO:167(CXCR1_MACMU_N term),优选地其中至少Y14或Y28已被硫酸化。r)SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated.
在第一方面的一些第四实施方式中,分离的硫酸化多肽包含以下序列In some fourth embodiments of the first aspect, the isolated sulfated polypeptide comprises the following sequence
a)SEQ ID NO:4(CCR1_HUMAN_N term)、SEQ ID NO:5(CCR1_MACFA_N term,或SEQID NO:6(CCD1_MOUSE_Nterm),优选地其中至少Y1 0和/或Y18已被硫酸化,或a) SEQ ID NO: 4 (CCR1_HUMAN_N term), SEQ ID NO: 5 (CCR1_MACFA_N term), or SEQ ID NO: 6 (CCD1_MOUSE_N term), preferably wherein at least Y10 and/or Y18 have been sulfated, or
b)SEQ ID NO:10(CCR2_HUMAN_N term)或SEQ ID NO:11(CCR2_MACMU_N term),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 10 (CCR2_HUMAN_N term) or SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:12(CCR2_MOUSE_N term),优选地其中至少Y37和/或Y39已被硫酸化,或c) SEQ ID NO: 12 (CCR2_MOUSE_N term), preferably wherein at least Y37 and/or Y39 has been sulfated, or
d)SEQ ID NO:16(CCR3_HUMAN_N term),优选地其中Y16和/或Y17已被硫酸化,或d) SEQ ID NO: 16 (CCR3_HUMAN_N term), preferably wherein Y16 and/or Y17 have been sulfated, or
e)SEQ ID NO:17(CCR3_MACFA_N term),优选地其中Y16已被硫酸化,或e) SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y16 has been sulfated, or
f)SEQ ID NO:18(CCR3_MOUSE_N term),优选地其中Y20和/或Y22已被硫酸化,或f) SEQ ID NO: 18 (CCR3_MOUSE_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
g)SEQ ID NO:22(CCR4_HUMAN_N term)、SEQ ID NO:23(CCR4_MACFA_N term,或SEQ ID NO:24(CCR4_MOUSE_Nterm),优选地至少其中Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或g) SEQ ID NO: 22 (CCR4_HUMAN_N term), SEQ ID NO: 23 (CCR4_MACFA_N term), or SEQ ID NO: 24 (CCR4_MOUSE_N term), preferably wherein at least Y22 has been sulfated and preferably in addition Y16, Y19 and/or Y20 has been sulfated, or
h)SEQ ID NO:28(CCR5_HUMAN_N term)或SEQ ID NO:29(CCR5_MACMU_N term),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,或h) SEQ ID NO: 28 (CCR5_HUMAN_N term) or SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
i)SEQ ID NO:30(CCR5_MOUSE_N term),优选地其中Y10、Y12和Y16中的两个或三个已被硫酸化,或i) SEQ ID NO: 30 (CCR5_MOUSE_N term), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
j)SEQ ID NO:34(CCR6_HUMAN_N term),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或j) SEQ ID NO: 34 (CCR6_HUMAN_N term), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
k)SEQ ID NO:35(CCR6_MACFA_N term),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或k)SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
l)SEQ ID NO:36(CCR6_MOUSE_N term),优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,或l) SEQ ID NO: 36 (CCR6_MOUSE_N term), preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated, or
m)SEQ ID NO:40(CCR7_HUMAN_N term)或SEQ ID NO:41(CCR7_MACFA_N term),优选地其中Y8和Y17中的一个或两个已被硫酸化,或m) SEQ ID NO: 40 (CCR7_HUMAN_N term) or SEQ ID NO: 41 (CCR7_MACFA_N term), preferably wherein one or both of Y8 and Y17 have been sulfated, or
n)SEQ ID NO:42(CCR7_MOUSE_N term),优选地其中Y8和Y17中的一个或两个以及任选的Y20已被硫酸化,或n)SEQ ID NO: 42 (CCR7_MOUSE_N term), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
o)SEQ ID NO:46(CCR8_HUMAN_N term,C=X或S),或SEQ ID NO:47(CCR8_MACFA_Nterm,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或o) SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), or SEQ ID NO: 47 (CCR8_MACFA_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
p)SEQ ID NO:48(CCR8_MOUSE_N term,C=X或S),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或p)SEQ ID NO: 48 (CCR8_MOUSE_N term, C = X or S), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
q)SEQ ID NO:64(CCR9_HUMAN_N term)或SEQ ID NO:65(CCR9_MACFA_N term),优选地至少Y28,并且还优选地Y17和/或Y37已被硫酸化,或q) SEQ ID NO: 64 (CCR9_HUMAN_N term) or SEQ ID NO: 65 (CCR9_MACFA_N term), preferably at least Y28, and even more preferably Y17 and/or Y37 have been sulfated, or
r)SEQ ID NO:66(CCR9_MOUSE_N term),优选地其中至少Y28已硫酸化,并且还优选地Y19已被硫酸化;或r)SEQ ID NO: 66 (CCR9_MOUSE_N term), preferably wherein at least Y28 has been sulfated, and even more preferably Y19 has been sulfated; or
s)SEQ ID NO:70(CCR10_HUMAN_N term),或SEQ ID NO:71(CCR10_MACFA_Nterm),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或s) SEQ ID NO: 70 (CCR10_HUMAN_N term), or SEQ ID NO: 71 (CCR10_MACFA_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
t)SEQ ID NO:72(CCR10_MOUSE_N term),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或t)SEQ ID NO: 72 (CCR10_MOUSE_N term), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
u)SEQ ID NO:76(CXCR1_HUMAN_N term),优选地其中Y27已被硫酸化,或u)SEQ ID NO: 76 (CXCR1_HUMAN_N term), preferably wherein Y27 has been sulfated, or
v)SEQ ID NO:77(CXCR1_MACFA_N term),优选地其中Y14和Y28中的至少一个已被硫酸化,或v)SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein at least one of Y14 and Y28 has been sulfated, or
w)SEQ ID NO:78(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化,或w)SEQ ID NO: 78 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated, or
x)SEQ ID NO:82(CXCR2_HUMAN_N term),优选地其中Y23和/或Y25已被硫酸化,或x)SEQ ID NO: 82 (CXCR2_HUMAN_N term), preferably wherein Y23 and/or Y25 have been sulfated, or
y)SEQ ID NO:83(CXCR2_MACFA_N term),优选地其中Y20和/或Y22已被硫酸化,或y)SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
z)SEQ ID NO:84(CXCR2_MOUSE_N term),优选地其中Y24已被硫酸化,或z)SEQ ID NO: 84 (CXCR2_MOUSE_N term), preferably wherein Y24 has been sulfated, or
aa)SEQ ID NO:88(CXCR3_HUMAN_N term),SEQ ID NO:89(CXCR3_MACFA_N term),或SEQ ID NO:90(CXCR3_MOUSE_Nterm),优选地Y27和Y29中的至少一个或两个已被硫酸化,或aa) SEQ ID NO: 88 (CXCR3_HUMAN_N term), SEQ ID NO: 89 (CXCR3_MACFA_N term), or SEQ ID NO: 90 (CXCR3_MOUSE_N term), preferably at least one or both of Y27 and Y29 have been sulfated, or
bb)SEQ ID NO:94(CXCR4_HUMAN_N term),或SEQ ID NO:95(CXCR4_MACFA_Nterm),优选地其中至少Y12和/或Y21已被硫酸化,或bb)SEQ ID NO: 94 (CXCR4_HUMAN_N term), or SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 have been sulfated, or
cc)SEQ ID NO:96(CXCR4_MOUSE_N term),优选地其中至少Y23和/或Y14已被硫酸化,或cc)SEQ ID NO: 96 (CXCR4_MOUSE_N term), preferably wherein at least Y23 and/or Y14 has been sulfated, or
dd)SEQ ID NO:100(CXCR5_HUMAN_N term),或SEQ ID NO:101(CXCR5_MACFA_Nterm),优选地其中Y3和Y27中的至少一个已被硫酸化,或dd)SEQ ID NO: 100 (CXCR5_HUMAN_N term), or SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, or
ee)SEQ ID NO:102(CXCR5_MOUSE_N term),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或ee)SEQ ID NO: 102 (CXCR5_MOUSE_N term), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
ff)SEQ ID NO:106(CXCR6_HUMAN_N term),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或ff)SEQ ID NO: 106 (CXCR6_HUMAN_N term), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
gg)SEQ ID NO:107(CXCR6_MACFA_N term),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或gg)SEQ ID NO: 107(CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
hh)SEQ ID NO:108(CXCR6_MOUSE_N term),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或hh)SEQ ID NO: 108 (CXCR6_MOUSE_N term), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
ii)SEQ ID NO:160(CX3CR1_HUMAN_N term),优选地其中至少Y14已被硫酸化,或ii) SEQ ID NO: 160 (CX3CR1_HUMAN_N term), preferably wherein at least Y14 has been sulfated, or
jj)SEQ ID NO:161(CX3CR1_MACFA_N term),优选地其中至少Y20或Y22已被硫酸化,或jj)SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
kk)SEQ ID NO:162(CX3CR1_MOUSE_N term),优选地其中至少Y15已被硫酸化,或kk)SEQ ID NO: 162 (CX3CR1_MOUSE_N term), preferably wherein at least Y15 has been sulfated, or
ll)SEQ ID NO:166(CXCR1_HUMAN_N term),优选地其中至少Y27已被硫酸化,或ll)SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated, or
mm)SEQ ID NO:167(CXCR1_MACMU_N term),优选地其中至少Y14或Y28已被硫酸化,或mm)SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated, or
nn)SEQ ID NO:168(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化。nn)SEQ ID NO: 168(CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated.
在第一方面的一些第一、第二、第三或第四实施方式中,分离的硫酸化多肽包含以下序列或与以下序列具有至少90%序列同一性的序列In some first, second, third, or fourth embodiments of the first aspect, the isolated sulfated polypeptide comprises the following sequence or a sequence having at least 90% sequence identity with the following sequence.
a)SEQ ID NO:1(CCR1_HUMAN_TRD)、SEQ ID NO:4(CCR1_HUMAN_N term)、SEQ IDNO:2(CCR1_MACFA_TRD)、SEQ ID NO:5(CCR1_MACFA_Nterm)、SEQ ID NO:3(CCR1_MOUSE_TRD)或SEQ ID NO:6(CCR1_MOUSE_N term),优选地其中至少Y1 0和/或Y18已被硫酸化,或a) SEQ ID NO: 1 (CCR1_HUMAN_TRD), SEQ ID NO: 4 (CCR1_HUMAN_N term), SEQ ID NO: 2 (CCR1_MACFA_TRD), SEQ ID NO: 5 (CCR1_MACFA_N term), SEQ ID NO: 3 (CCR1_MOUSE_TRD) or SEQ ID NO: 6 (CCR1_MOUSE_N term), preferably wherein at least Y10 and/or Y18 have been sulfated, or
b)SEQ ID NO:7(CCR2_HUMAN_TRD)、SEQ ID NO:10(CCR2_HUMAN_N term)、SEQ IDNO:8(CCR2_MACMU_TRD)或SEQ ID NO:11(CCR2_MACMU_Nterm),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 7 (CCR2_HUMAN_TRD), SEQ ID NO: 10 (CCR2_HUMAN_N term), SEQ ID NO: 8 (CCR2_MACMU_TRD) or SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:9(CCR2_MOUSE_TRD)或SEQ ID NO:12(CCR2_MOUSE_N term),优选地其中至少Y37和/或Y39已被硫酸化,或c) SEQ ID NO: 9 (CCR2_MOUSE_TRD) or SEQ ID NO: 12 (CCR2_MOUSE_N term), preferably wherein at least Y37 and/or Y39 has been sulfated, or
d)SEQ ID NO:13(CCR3_HUMAN_TRD)或SEQ ID NO:16(CCR3_HUMAN_N term),优选地其中Y16和/或Y17已被硫酸化,或d) SEQ ID NO: 13 (CCR3_HUMAN_TRD) or SEQ ID NO: 16 (CCR3_HUMAN_N term), preferably wherein Y16 and/or Y17 have been sulfated, or
e)SEQ ID NO:14(CCR3_MACFA_TRD)或SEQ ID NO:17(CCR3_MACFA_N term),优选地其中Y16已被硫酸化,或e) SEQ ID NO: 14 (CCR3_MACFA_TRD) or SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y16 has been sulfated, or
f)SEQ ID NO:15(CCR3_MOUSE_TRD)或SEQ ID NO:18(CCR3_MOUSE_N term),优选地其中Y20和/或Y22已被硫酸化,或f) SEQ ID NO: 15 (CCR3_MOUSE_TRD) or SEQ ID NO: 18 (CCR3_MOUSE_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
g)SEQ ID NO:19(CCR4_HUMAN_TRD)、SEQ ID NO:22(CCR4_HUMAN_N term)、SEQ IDNO:20(CCR4_MACFA_TRD)、SEQ ID NO:23(CCR4_MACFA_N term)、SEQ ID NO:21(CCR4_MOUSE_TRD)或SEQ ID NO:24(CCR4_MOUSE_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或g) SEQ ID NO: 19 (CCR4_HUMAN_TRD), SEQ ID NO: 22 (CCR4_HUMAN_N term), SEQ ID NO: 20 (CCR4_MACFA_TRD), SEQ ID NO: 23 (CCR4_MACFA_N term), SEQ ID NO: 21 (CCR4_MOUSE_TRD) or SEQ ID NO: 24 (CCR4_MOUSE_N term), preferably wherein at least Y22 has been sulfated and preferably additionally Y16, Y19 and/or Y20 has been sulfated, or
h)SEQ ID NO:25(CCR5_HUMAN_TRD)、SEQ ID NO:28(CCR5_HUMAN_N term)、SEQ IDNO:26(CCR5_MACMU_TRD)或SEQ ID NO:29(CCR5_MACMU_N term),优选地其中Y3、Y10、Y14和Y15的两个、三个或全部已被硫酸化,或h) SEQ ID NO: 25 (CCR5_HUMAN_TRD), SEQ ID NO: 28 (CCR5_HUMAN_N term), SEQ ID NO: 26 (CCR5_MACMU_TRD) or SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
i)SEQ ID NO:27(CCR5_MOUSE_TRD)或SEQ ID NO:30(CCR5_MOUSE_N term),优选地其中Y1 0、Y12和Y16中的两个或三个已被硫酸化,或i) SEQ ID NO: 27 (CCR5_MOUSE_TRD) or SEQ ID NO: 30 (CCR5_MOUSE_N term), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
j)SEQ ID NO:31(CCR6_HUMAN_TRD)或SEQ ID NO:34(CCR6_HUMAN_N term),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或j) SEQ ID NO: 31 (CCR6_HUMAN_TRD) or SEQ ID NO: 34 (CCR6_HUMAN_N term), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
k)SEQ ID NO:32(CCR6_MACFA_TRD)或SEQ ID NO:35(CCR6_MACFA_N term),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或k) SEQ ID NO: 32 (CCR6_MACFA_TRD) or SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
l)SEQ ID NO:33(CCR6_MOUSE_TRD)或SEQ ID NO:36(CCR6_MOUSE_N term),优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,或l) SEQ ID NO: 33 (CCR6_MOUSE_TRD) or SEQ ID NO: 36 (CCR6_MOUSE_N term), preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated, or
m)SEQ ID NO:37(CCR7_HUMAN_TRD)、SEQ ID NO:40(CCR7_HUMAN_N term)、SEQ IDNO:38(CCR7_MACFA_TRD)或SEQ ID NO:41(CCR7_MACFA_N term),优选地Y8和Y17中的一个或两个被硫酸化,或m) SEQ ID NO: 37 (CCR7_HUMAN_TRD), SEQ ID NO: 40 (CCR7_HUMAN_N term), SEQ ID NO: 38 (CCR7_MACFA_TRD) or SEQ ID NO: 41 (CCR7_MACFA_N term), preferably one or both of Y8 and Y17 are sulfated, or
n)SEQ ID NO:39(CCR7_MOUSE_TRD)或SEQ ID NO:42(CCR7_MOUSE_N term),优选地其中Y8和Y17的一个或两个以及任选的Y20已被硫酸化,或n) SEQ ID NO: 39 (CCR7_MOUSE_TRD) or SEQ ID NO: 42 (CCR7_MOUSE_N term), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
o)SEQ ID NO:43(CCR8_HUMAN_TRD)、SEQ ID NO:44(CCR8_MACFA_TRD)、SEQ IDNO:46(CCR8_HUMAN_N term,C=X或S),或SEQ ID NO:47(CCR8_MACFA_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或o) SEQ ID NO: 43 (CCR8_HUMAN_TRD), SEQ ID NO: 44 (CCR8_MACFA_TRD), SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), or SEQ ID NO: 47 (CCR8_MACFA_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
p)SEQ ID NO:45(CCR8_MOUSE_TRD)或SEQ ID NO:48(CCR8_MOUSE_N term,C=X或S),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或p) SEQ ID NO: 45 (CCR8_MOUSE_TRD) or SEQ ID NO: 48 (CCR8_MOUSE_N term, C=X or S), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
q)SEQ ID NO:61(CCR9_HUMAN_TRD)、SEQ ID NO:64(CCR9_HUMAN_N term)、SEQ IDNO:62(CCR9_MACFA_TRD)或SEQ ID NO:65(CCR9_MACFA_N term),优选地至少Y28,并且还优选地Y17和/或Y37已被硫酸化,或q) SEQ ID NO: 61 (CCR9_HUMAN_TRD), SEQ ID NO: 64 (CCR9_HUMAN_N term), SEQ ID NO: 62 (CCR9_MACFA_TRD) or SEQ ID NO: 65 (CCR9_MACFA_N term), preferably at least Y28, and even more preferably Y17 and/or Y37 have been sulfated, or
r)SEQ ID NO:63(CCR9_MOUSE_TRD)或SEQ ID NO:66(CCR9_MOUSE_N term),优选地其中至少Y28已被硫酸化,并且优选地Y19也已被硫酸化,或r) SEQ ID NO: 63 (CCR9_MOUSE_TRD) or SEQ ID NO: 66 (CCR9_MOUSE_N term), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated, or
s)SEQ ID NO:67(CCR10_HUMAN_TRD)、SEQ ID NO:70(CCR 10_HUMAN_N term)、SEQID NO:68(CCR 10_MACFA_TRD)或SEQ ID NO:71(CCR10_MACFA_N term),优选Y14和Y22中的至少一个或两者已被硫酸化,或s) SEQ ID NO: 67 (CCR10_HUMAN_TRD), SEQ ID NO: 70 (CCR 10_HUMAN_N term), SEQ ID NO: 68 (CCR 10_MACFA_TRD) or SEQ ID NO: 71 (CCR10_MACFA_N term), preferably at least one or both of Y14 and Y22 have been sulfated, or
t)SEQ ID NO:69(CCR10_MOUSE_TRD)或SEQ ID NO:72(CCR1 0_MOUSE_N term),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或t) SEQ ID NO: 69 (CCR10_MOUSE_TRD) or SEQ ID NO: 72 (CCR10_MOUSE_N term), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
u)SEQ ID NO:73(CXCR1_HUMAN_TRD)或SEQ ID NO:76(CXCR1_HUMAN_N term),优选地其中Y27已被硫酸化,或u) SEQ ID NO: 73 (CXCR1_HUMAN_TRD) or SEQ ID NO: 76 (CXCR1_HUMAN_N term), preferably wherein Y27 has been sulfated, or
v)SEQ ID NO:74(CXCR1_MACFA_TRD)或SEQ ID NO:77(CXCR1_MACFA_N term),优选地其中Y14和Y28中的至少一个已被硫酸化,或v) SEQ ID NO: 74 (CXCR1_MACFA_TRD) or SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein at least one of Y14 and Y28 has been sulfated, or
w)SEQ ID NO:75(CXCR1_MOUSE_TRD)或SEQ ID NO:78(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化,或w) SEQ ID NO: 75 (CXCR1_MOUSE_TRD) or SEQ ID NO: 78 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated, or
x)SEQ ID NO:79(CXCR2_HUMAN_TRD)或SEQ ID NO:82(CXCR2_HUMAN_N term),优选地其中Y23和/或Y25已被硫酸化,或x) SEQ ID NO: 79 (CXCR2_HUMAN_TRD) or SEQ ID NO: 82 (CXCR2_HUMAN_N term), preferably wherein Y23 and/or Y25 have been sulfated, or
y)SEQ ID NO:80(CXCR2_MACFA_TRD)或SEQ ID NO:83(CXCR2_MACFA_N term),优选地其中Y20和/或Y22已被硫酸化,或y) SEQ ID NO: 80 (CXCR2_MACFA_TRD) or SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
z)SEQ ID NO:81(CXCR2_MOUSE_TRD)或SEQ ID NO:84(CXCR2_MOUSE_N term),优选地其中Y24已被硫酸化,或z) SEQ ID NO: 81 (CXCR2_MOUSE_TRD) or SEQ ID NO: 84 (CXCR2_MOUSE_N term), preferably wherein Y24 has been sulfated, or
aa)SEQ ID NO:85(CXCR3_HUMAN_TRD)、SEQ ID NO:88(CXCR3_HUMAN_N term)、SEQID NO:86(CXCR3_MACFA_TRD)、SEQ ID NO:89(CXCR3_MACFA_Nterm)、SEQ ID NO:87(CXCR3_MOUSE_TRD)或SEQ ID NO:90(CXCR3_MOUSE_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或aa) SEQ ID NO: 85 (CXCR3_HUMAN_TRD), SEQ ID NO: 88 (CXCR3_HUMAN_N term), SEQ ID NO: 86 (CXCR3_MACFA_TRD), SEQ ID NO: 89 (CXCR3_MACFA_N term), SEQ ID NO: 87 (CXCR3_MOUSE_TRD) or SEQ ID NO: 90 (CXCR3_MOUSE_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
bb)SEQ ID NO:91(CXCR4_HUMAN_TRD)、SEQ ID NO:94(CXCR4_HUMAN_N term)、SEQID NO:92(CXCR4_MACFA_TRD)或SEQ ID NO:95(CXCR4_MACFA_N term),优选地其中至少Y12和/或Y21已被硫酸化,或bb)SEQ ID NO: 91 (CXCR4_HUMAN_TRD), SEQ ID NO: 94 (CXCR4_HUMAN_N term), SEQ ID NO: 92 (CXCR4_MACFA_TRD) or SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 have been sulfated, or
cc)SEQ ID NO:93(CXCR4_MOUSE_TRD)或SEQ ID NO:96(CXCR4_MOUSE_N term),优选地其中至少Y23和/或Y14已被硫酸化,或cc) SEQ ID NO: 93 (CXCR4_MOUSE_TRD) or SEQ ID NO: 96 (CXCR4_MOUSE_N term), preferably wherein at least Y23 and/or Y14 has been sulfated, or
dd)SEQ ID NO:97(CXCR5_HUMAN_TRD)、SEQ ID NO:100(CXCR5_HUMAN_N term)、SEQ ID NO:98(CXCR5_MACFA_TRD)或SEQ ID NO:101(CXCR5_MACFA_N term),优选地Y3和Y27中的至少一个已被硫酸化,或dd) SEQ ID NO: 97 (CXCR5_HUMAN_TRD), SEQ ID NO: 100 (CXCR5_HUMAN_N term), SEQ ID NO: 98 (CXCR5_MACFA_TRD) or SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably at least one of Y3 and Y27 has been sulfated, or
ee)SEQ ID NO:99(CXCR5_MOUSE_TRD)或SEQ ID NO:102(CXCR5_MOUSE_N term),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或ee) SEQ ID NO: 99 (CXCR5_MOUSE_TRD) or SEQ ID NO: 102 (CXCR5_MOUSE_N term), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
ff)SEQ ID NO:103(CXCR6_HUMAN_TRD)或SEQ ID NO:106(CXCR6_HUMAN_N term),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或ff)SEQ ID NO: 103 (CXCR6_HUMAN_TRD) or SEQ ID NO: 106 (CXCR6_HUMAN_N term), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
gg)SEQ ID NO:104(CXCR6_MACFA_TRD)或SEQ ID NO:107(CXCR6_MACFA_N term),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或gg)SEQ ID NO: 104 (CXCR6_MACFA_TRD) or SEQ ID NO: 107 (CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
hh)SEQ ID NO:105(CXCR6_MOUSE_TRD)或SEQ ID NO:108(CXCR6_MOUSE_N term),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或hh)SEQ ID NO: 105 (CXCR6_MOUSE_TRD) or SEQ ID NO: 108 (CXCR6_MOUSE_N term), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
ii)SEQ ID NO:157(CX3CR1_HUMAN_TRD)或SEQ ID NO:160(CX3CR1_HUMAN_Nterm),优选地其中至少Y14已被硫酸化,或ii) SEQ ID NO: 157 (CX3CR1_HUMAN_TRD) or SEQ ID NO: 160 (CX3CR1_HUMAN_Nterm), preferably wherein at least Y14 has been sulfated, or
jj)SEQ ID NO:158(CX3CR1_MACFA_TRD),优选地其中至少Y20已被硫酸化,或jj)SEQ ID NO: 158(CX3CR1_MACFA_TRD), preferably wherein at least Y20 has been sulfated, or
kk)SEQ ID NO:161(CX3CR1_MACFA_N term),优选地其中至少Y20或Y22已被硫酸化,或kk)SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
ll)SEQ ID NO:159(CX3CR1_MOUSE_TRD)或SEQ ID NO:162(CX3CR1_MOUSE_Nterm),优选地其中至少Y15已被硫酸化,或ll) SEQ ID NO: 159 (CX3CR1_MOUSE_TRD) or SEQ ID NO: 162 (CX3CR1_MOUSE_Nterm), preferably wherein at least Y15 has been sulfated, or
mm)SEQ ID NO:163(CXCR1_HUMAN_TRD)或SEQ ID NO:166(CXCR1_HUMAN_N term),优选地其中至少Y27已被硫酸化,或mm) SEQ ID NO: 163 (CXCR1_HUMAN_TRD) or SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated, or
nn)SEQ ID NO:164(CXCR1_MACMU_TRD),优选地其中至少Y14已被硫酸化,或nn)SEQ ID NO: 164(CXCR1_MACMU_TRD), preferably wherein at least Y14 has been sulfated, or
oo)SEQ ID NO:167(CXCR1_MACMU_N term),优选地其中至少Y14或Y28已被硫酸化,或oo)SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated, or
pp)SEQ ID NO:165(CXCR1_MOUSE_TRD)或SEQ ID NO:168(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化。pp) SEQ ID NO: 165 (CXCR1_MOUSE_TRD) or SEQ ID NO: 168 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated.
优选地,根据当前方面的分离的多肽被固定,例如通过接头。固定可以在不限于合适的珠子、颗粒、蛋白或固体支持物的情况下发生。Preferably, the isolated peptides, according to the present aspect, are immobilized, for example, via a linker. Immobilization can occur, without limitation, suitable beads, particles, proteins, or solid supports.
方面2-包含分离多肽的缀合物Aspect 2 - Contains conjugates of isolated peptides
根据本发明的第二方面,提供了包含根据第一方面的分离的硫酸化多肽的缀合物。According to a second aspect of the invention, a conjugate comprising the sulfated polypeptide isolated according to the first aspect is provided.
例如,缀合物可包含根据第一方面的第一实施方式的多肽。例如,缀合物可包含根据第一方面的第二实施方式的多肽。例如,缀合物可包含根据第一方面的第三实施方式的多肽。例如,缀合物可包含根据第一方面的第三实施方式的一些实施方式A、B、C的多肽。例如,缀合物可包含根据第一方面的第四实施方式的多肽。例如,缀合物可包含根据第一方面的第四实施方式的一些实施方式A、B、C的多肽。For example, the conjugate may contain a polypeptide according to a first embodiment of the first aspect. For example, the conjugate may contain a polypeptide according to a second embodiment of the first aspect. For example, the conjugate may contain a polypeptide according to a third embodiment of the first aspect. For example, the conjugate may contain polypeptides of some embodiments A, B, and C of the third embodiment of the first aspect. For example, the conjugate may contain a polypeptide according to a fourth embodiment of the first aspect. For example, the conjugate may contain polypeptides of some embodiments A, B, and C of the fourth embodiment of the first aspect.
例如,分离的硫酸化多肽可以附着到标签或接头上用于固定或回收。合适的标签选自本领域已知的标签,例如小有机分子如生物素(其与链霉亲和素强烈且非共价结合)、其衍生物或短肽序列如Flag标签、HA标签、Myc标签或His标签(参见表4.1或实施例10.1.2)。对于某些应用,标签可以是蛋白质,例如人血清白蛋白(参见表4.1或实施例10.1.2),或载体蛋白,例如KLH、OVA或BSA,或更大的结构,例如珠子或磁性粒子。优选地,标签可以通过TRD的C端或N端或趋化因子受体的N端连接,但也可以通过反应性残基或氨基酸侧链连接,例如TRD内的赖氨酸。在一些实施方式下,标签通过接头连接,接头可以是本领域已知的任何接头。合适的接头包括三氧杂十三聚糖-琥珀酰胺酸(Ttds)接头(参见表4.1)、β-丙氨酸、GABA、AEA、Ava、Ahx、PEG2间隔子、PEG3间隔子、PEG4间隔子、O1Pen、O2Oc或O1Pen-O1。For example, isolated sulfated polypeptides can be attached to tags or adapters for immobilization or recovery. Suitable tags are selected from those known in the art, such as small organic molecules like biotin (which binds strongly and non-covalently to streptavidin), their derivatives, or short peptide sequences such as Flag tags, HA tags, Myc tags, or His tags (see Table 4.1 or Example 10.1.2). For some applications, the tag can be a protein, such as human serum albumin (see Table 4.1 or Example 10.1.2), or a carrier protein, such as KLH, OVA, or BSA, or a larger structure, such as beads or magnetic particles. Preferably, the tag can be attached via the C-terminus or N-terminus of the TRD or the N-terminus of the chemokine receptor, but it can also be attached via reactive residues or amino acid side chains, such as lysine residues within the TRD. In some embodiments, the tag is attached via an adapter, which can be any adapter known in the art. Suitable linkers include trioxane-tetrasmosuccinic acid (Ttds) linkers (see Table 4.1), β-alanine, GABA, AEA, Ava, Ahx, PEG2 spacers, PEG3 spacers, PEG4 spacers, O1Pen, O2Oc, or O1Pen-O1.
方面3-抗原生产方法Aspect 3 - Antigen Production Methods
硫酸化肽可能难以合成,例如因为硫酸盐在酸性条件下是不稳定的(Houben-Weyl,Methods of Organic Chemistry Vol.E 22b,Synthesis of Peptides andPeptidomimetics,4th Edition,section 6.6.1.2Synthesis of Sulfated TyrosinePeptides with Tyrosine O-Sulfate Synthons,p.440 ff.in:Felix,Arthur et al.:2004)。Sulfated peptides may be difficult to synthesize, for example because sulfates are unstable under acidic conditions (Houben-Weyl, Methods of Organic Chemistry Vol. E 22b, Synthesis of Peptides and Peptidomimetics, 4th Edition, section 6.6.1.2 Synthesis of Sulfated Tyrosine Peptides with Tyrosine O-Sulfate Synthons, p. 440 ff.in: Felix, Arthur et al.: 2004).
根据第三方面,提供了一种生产根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物的方法,其中所述方法包括合成分离的多肽和硫酸化相应的酪氨酸残基。According to a third aspect, a method is provided for producing a sulfated polypeptide isolated according to a first aspect or a conjugate according to a second aspect, wherein the method comprises synthesizing the isolated polypeptide and sulfated the corresponding tyrosine residues.
根据第一方面的分离多肽的合成和相应酪氨酸残基的硫酸化可以如实施例5所述进行,或者可以根据本领域已知的任何其他方法进行。In 6.6.1章“Methods of OrganicChemistry Vol.E 22b,Synthesis of Peptides and Peptidomimetics”,Houben-Weyl描述了合成硫酸化酪氨酸肽的各种化学方法。本章,特别是这些方法,通过引用全部并入本文。The synthesis of the isolated peptides according to the first aspect and the sulfation of the corresponding tyrosine residues can be carried out as described in Example 5, or according to any other method known in the art. In Chapter 6.6.1, “Methods of Organic Chemistry Vol. E 22b, Synthesis of Peptides and Peptidomimetics,” Houben-Weyl describes various chemical methods for synthesizing sulfated tyrosine peptides. This chapter, and in particular these methods, are incorporated herein by reference in their entirety.
例如,可以使用Bunschoten等(Bunschoten,Anton,et al.″A general sequenceindependent solid phase method for the site specific synthesis of multiplesulfated-tyrosine containing peptides.″Chemical communications 21(2009):2999-3001)先前描述的序列非依赖性固相方法进行合成,其全部内容通过引用并入本文。简而言之,根据Fmoc tBu策略合成肽,然后选择性地去保护待硫酸化的酪氨酸残基并引入受保护的硫酸基团。在硫酸化肽的合成完成后,通过酸解将其从树脂上裂解,除去硫酸盐保护基以外的保护基,从而防止在该步骤期间不期望的酸诱导的硫酸盐基的除去。最后,可以在微酸还原步骤中除去硫酸盐保护基团,使硫酸盐基团不受影响。For example, the sequence-independent solid-phase method previously described by Bunschoten et al. (Bunschoten, Anton, et al. "A general sequence-independent solid-phase method for the site-specific synthesis of multiple sulfated-tyrosine containing peptides." Chemical communications 21 (2009): 2999-3001), the entire contents of which are incorporated herein by reference. In short, the peptide is synthesized according to the Fmoc tBu strategy, and then the tyrosine residues to be sulfated are selectively deprotected and a protected sulfate group is introduced. After the synthesis of the sulfated peptide is complete, it is cleaved from the resin by acid hydrolysis to remove the protecting groups other than the sulfate protecting groups, thereby preventing undesirable acid-induced removal of sulfate groups during this step. Finally, the sulfate protecting groups can be removed in a micro-acid reduction step, leaving the sulfate groups unaffected.
Chen等报道了一种获得含sY肽的短而有效的一步路线,其中通过基于Fmoc的固相合成策略将Fmoc保护的氟硫酸化酪氨酸(Y(OSO2F))结合到感兴趣的肽中(参见Chen,Wentao,et al.″Synthesis of Sulfotyrosine-Containing Peptides by IncorporatingFluorosulfated Tyrosine Using an Fmoc-Based Solid-Phase Strategy.″AngewandteChemie 128.5(2016):1867-1870),其全部内容通过引用并入本文。标准的同时肽树脂裂解和去除酸不稳定侧链保护基团产生含氟硫酸化酪氨酸的粗肽。碱性乙二醇作为溶剂和反应物,以高产率将氟硫酸化酪氨酸肽转化为磺基酪氨酸肽。Chen et al. reported a short and efficient one-step route for obtaining sY-containing peptides, in which Fmoc-protected fluorosulfated tyrosine (Y(OSO2F)) is incorporated into the peptide of interest via a Fmoc-based solid-phase synthesis strategy (see Chen, Wentao, et al. "Synthesis of Sulfotyrosine-Containing Peptides by Incorporating Fluorosulfated Tyrosine Using an Fmoc-Based Solid-Phase Strategy." Angewandte Chemie 128.5 (2016): 1867-1870), the entire contents of which are incorporated herein by reference. Standard simultaneous peptide resin cleavage and removal of acid-labile side-chain protecting groups yield crude peptides containing fluorosulfated tyrosine. Basic ethylene glycol is used as both solvent and reactant to convert the fluorosulfated tyrosine peptides to sulfotyrosine peptides in high yield.
多肽的全局硫酸化也是可能的,例如使用三氧化硫吡啶。根据本发明,如果所有酪氨酸都必须硫酸化,或者如果部分硫酸化多肽的“粗”混合物用于进一步步骤,则可以使用该路线。此外,硫酸化可以以酶的方式发生,例如在使用天然硫酸化酶或其工程化版本的生物转化反应中。优选地,相应酪氨酸的硫酸化可以化学或酶法进行。优选地,使用Fmoc-tBu策略合成分离的多肽。Global sulfation of the peptide is also possible, for example, using pyridine trioxide. According to the invention, this route can be used if all tyrosines must be sulfated, or if a "crude" mixture of partially sulfated peptides is used for further steps. Furthermore, sulfation can occur enzymatically, for example in biotransformation reactions using natural sulfatases or engineered versions thereof. Preferably, the sulfation of the corresponding tyrosines can be carried out chemically or enzymatically. Preferably, the isolated peptide is synthesized using the Fmoc-tBu strategy.
根据第三方面的一些实施方式,该方法包括纯化所获得的多肽。纯化可以例如通过HPLC进行,例如使用C18柱。根据第三方面的一些实施方式,该方法包括多肽的分析表征。无限制地,可以使用光谱法或质谱法进行分析表征。According to some embodiments of the third aspect, the method includes purifying the obtained peptide. Purification can be performed, for example, by HPLC, using a C18 column. According to some embodiments of the third aspect, the method includes analytical characterization of the peptide. Analytical characterization can be performed using spectroscopic or mass spectrometric methods without limitation.
方面4-抗原的用途/方法包括抗原的用途Aspect 4 - Uses/Methods of Antigens, including the uses of antigens.
根据第四方面,提供了根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物用于抗体产生、作为抗原或用于脱靶筛选和/或用于抗体表征的用途。例如,根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物可用于产生全人抗体或其片段。例如,根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物可用于产生交叉反应性抗体。According to the fourth aspect, the sulfated polypeptide isolated according to the first aspect or the conjugate according to the second aspect is provided for use in antibody production, as an antigen, or for off-target screening and/or for antibody characterization. For example, the sulfated polypeptide isolated according to the first aspect or the conjugate according to the second aspect can be used to generate fully human antibodies or fragments thereof. For example, the sulfated polypeptide isolated according to the first aspect or the conjugate according to the second aspect can be used to generate cross-reactive antibodies.
根据第四方面的一些第一实施方式,提供了根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物用于抗体产生的用途。特别地,如本文别处所述,根据第一方面的分离的硫酸化多肽可用于促进特异性识别趋化因子受体的抗体的产生。According to some first embodiments of the fourth aspect, the use of the sulfated polypeptide isolated according to the first aspect or the conjugate according to the second aspect for antibody production is provided. In particular, as described elsewhere herein, the sulfated polypeptide isolated according to the first aspect can be used to promote the production of antibodies that specifically recognize chemokine receptors.
根据根据第四方面的一些第二实施方式,其可以与根据第四方面的第一实施方式相同或不同,根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物用作抗原,例如选择特异性结合趋化因子受体的抗体、抗体片段或分子,参见实施例6和8。According to some second embodiments of the fourth aspect, which may be the same as or different from the first embodiment of the fourth aspect, the isolated sulfated polypeptide of the first aspect or the conjugate of the second aspect may be used as an antigen, for example, an antibody, antibody fragment or molecule that specifically binds to a chemokine receptor, see Examples 6 and 8.
根据根据第四方面的一些第三实施方式,其可以与根据第四方面的第一和/或第二实施方式相同或不同,根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物用于脱靶筛选,以选择不结合特定七次跨膜受体的抗体,例如趋化因子受体(脱靶受体),参见实施例6和8。According to some third embodiments of the fourth aspect, which may be the same as or different from the first and/or second embodiments of the fourth aspect, the isolated sulfated peptides according to the first aspect or the conjugates according to the second aspect are used for off-target screening to select antibodies that do not bind to specific seven-transmembrane receptors, such as chemokine receptors (off-target receptors), see Examples 6 and 8.
根据一些第四实施方式,根据第四方面的方法包括使用根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物来表征抗体。优选地,所述抗体是根据本发明的抗体。例如,抗体的表征可包括使用ELISA、表面等离子体共振、质谱、竞争测定、染色、IHC、FACS或本领域已知的各种其他测定。According to some fourth embodiments, the method according to the fourth aspect includes characterizing the antibody using a sulfated polypeptide isolated according to the first aspect or a conjugate according to the second aspect. Preferably, the antibody is an antibody according to the invention. For example, antibody characterization may include using ELISA, surface plasmon resonance, mass spectrometry, competitive assay, staining, IHC, FACS, or various other assays known in the art.
方面5-抗体产生方法Aspect 5 - Antibody Production Methods
根据第五方面,提供了一种获得抗体或结合物的方法,该方法包括使用根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物。According to a fifth aspect, a method for obtaining an antibody or conjugate is provided, the method comprising using a sulfated polypeptide isolated according to a first aspect or a conjugate according to a second aspect.
根据一些第一实施方式,根据第五方面的方法包括使用根据第一方面的分离的硫酸化多肽或根据第二方面的缀合物作为抗原。According to some first embodiments, the method according to the fifth aspect includes using a sulfated polypeptide isolated according to the first aspect or a conjugate according to the second aspect as an antigen.
根据第五方面的一些优选的第一实施方式,所述方法包括使用至少一种另外分离的多肽或其缀合物,其中所述至少一种另外分离的多肽包含以下的TRDAccording to some preferred first embodiments of the fifth aspect, the method includes using at least one additionally isolated polypeptide or a conjugate thereof, wherein the at least one additionally isolated polypeptide comprises the following TRD
a)不同于第一七次跨膜受体的七次跨膜受体,或a) Seven-transmembrane receptors that are different from the first seven-transmembrane receptor, or
b)在源自不同物种的第一七次跨膜受体中,b) Among the first seven transmembrane receptors derived from different species
优选地,其中所述至少一种另外分离的多肽是根据第一方面的分离的多肽。Preferably, the at least one additionally separated polypeptide is a polypeptide separated according to the first aspect.
根据第五方面的第一实施方式的一些实施方式A,该方法包括使用至少一种另外分离的多肽或缀合物,优选地根据第一或第二方面,优选地作为抗原或用于脱靶选择。对于这些实施方式,第一分离的硫酸化多肽包含第一七次跨膜受体(例如趋化因子受体)的TRD,并且另外分离的多肽或缀合物包含不同于第一七次跨膜受体的七次跨膜受体的TRD。当另外分离的多肽或缀合物用作抗原时,该方法是用于产生识别至少两种不同的七次跨膜受体,例如两种不同趋化因子受体家族成员的抗体或结合物的方法。According to some embodiments A of the first embodiment of the fifth aspect, the method includes using at least one additionally isolated polypeptide or conjugate, preferably as an antigen or for off-target selection, according to the first or second aspect. In these embodiments, the first isolated sulfated polypeptide comprises a TRD of a first seven-transmembrane receptor (e.g., a chemokine receptor), and the additionally isolated polypeptide or conjugate comprises a TRD of a seven-transmembrane receptor different from the first seven-transmembrane receptor. When the additionally isolated polypeptide or conjugate is used as an antigen, the method is a method for generating antibodies or conjugates that recognize at least two different seven-transmembrane receptors, such as two different members of the chemokine receptor family.
当另外分离的多肽或缀合物用于脱靶筛选时,该方法是用于产生仅识别特定的七次跨膜受体的抗体或结合物的方法,例如,以避免与另外趋化因子受体家族成员脱靶结合。When additionally isolated peptides or conjugates are used for off-target screening, this method is used to generate antibodies or conjugates that recognize only specific seven-transmembrane receptors, for example, to avoid off-target binding with other members of the chemokine receptor family.
根据第五方面的第一实施方式的一些实施方式B,该方法包括使用至少一种另外分离的多肽或缀合物,优选地根据第一或第二方面,作为抗原或用于脱靶选择。对于这些实施方式,第一分离的多肽包含第一物种的第一七次跨膜受体(例如人类趋化因子受体)的TRD,并且另外分离的多肽包括衍生自不同物种的相同七次跨膜受体(例如食蟹猴趋化因子受体)的TRD。例如,第一多肽可包含人趋化因子受体的TRD,第二多肽可包含食蟹猴趋化因子受体的TRD。According to some embodiments B of the first embodiment of the fifth aspect, the method includes using at least one additionally isolated polypeptide or conjugate, preferably according to the first or second aspect, as an antigen or for off-target selection. In these embodiments, the first isolated polypeptide comprises a TRD of a first seven-transmembrane receptor of a first species (e.g., a human chemokine receptor), and the additionally isolated polypeptide comprises a TRD of the same seven-transmembrane receptor derived from a different species (e.g., a cynomolgus monkey chemokine receptor). For example, the first polypeptide may comprise a TRD of a human chemokine receptor, and the second polypeptide may comprise a TRD of a cynomolgus monkey chemokine receptor.
这些实施方式B具有特别的优点,因为对于趋化因子受体,特别是对于CCR8,对人和合适的模型物种都具有交叉反应性的趋化因子抗体或结合物的产生是困难的。虽然跨膜结构域之间的总体一致性相对较高,但趋化因子受体的胞外结构域在不同趋化因子受体家族成员之间以及特定趋化因子受体的物种之间的一致性较低(图1、图2a)。然而,根据本发明,现在发现TRD内包含基序的小硫酸化酪氨酸对于特定的趋化因子受体来说足够保守以用于获得大量交叉反应性抗体。实施例6描述了针对人和食蟹猴的交叉反应抗体的产生,和实施例10.1.1显示了根据本发明的各种抗体在两个物种中的优异亲和力。与啮齿动物和小鼠相比,食蟹猴是首选的模型系统,因为小鼠模型未能预测免疫副作用。These implementations B have particular advantages because the generation of cross-reactive chemokine antibodies or conjugates against both humans and suitable model species is difficult for chemokine receptors, particularly CCR8. While the overall concordance between transmembrane domains is relatively high, the concordance of extracellular domains of chemokine receptors is low between different chemokine receptor family members and between species of specific chemokine receptors (Figs. 1, 2a). However, according to the invention, it is now found that small sulfated tyrosine residues containing motifs within the TRD are sufficiently conserved for specific chemokine receptors to yield a large number of cross-reactive antibodies. Example 6 describes the generation of cross-reactive antibodies against humans and cynomolgus monkeys, and Example 10.1.1 demonstrates the excellent affinity of various antibodies according to the invention in both species. Cynomolgus monkeys are the preferred model system compared to rodents and mice because mouse models fail to predict immune side effects.
根据第五方面的方法可以是本领域已知的用于产生抗体的任何方法。例如,该方法可以是常规免疫方法,例如,其中根据第一方面的多肽与KLH缀合,并施用给合适的动物用于免疫。The method according to the fifth aspect can be any method known in the art for generating antibodies. For example, the method can be a conventional immunization method, such as in which the peptide according to the first aspect is conjugated with KLH and administered to a suitable animal for immunization.
例如,免疫后,免疫动物的脾细胞可用于产生产生动物抗体的杂交瘤细胞,第二步可通过本领域已知的方法筛选与抗原特异性结合的抗体,例如ELISA以及结合脱靶(如果适用)。或者,可以在基于液滴的微流体系统或细胞培养测定中直接筛选脾细胞以产生与抗原结合的抗体。之后仅将选定的脾细胞直接应用于测序以获得抗体或杂交瘤生成的序列。另一种方法可以包括使用抗原与抗体库一起淘选,该抗体库例如可以是噬菌体展示库,例如不受其他地方描述的限制,或者哺乳动物图库。在筛选抗原上的文库后,可通过本领域已知的方法(例如ELISA或SPR)筛选富集的抗体以特异性结合抗原,如本文更详细描述的。For example, following immunization, spleen cells from an immunized animal can be used to generate hybridoma cells that produce animal antibodies. A second step involves screening for antibodies that specifically bind to the antigen using methods known in the art, such as ELISA, and for binding off-target (if applicable). Alternatively, spleen cells can be directly screened to produce antibodies that bind to the antigen in a droplet-based microfluidic system or cell culture assay. Only the selected spleen cells are then directly used for sequencing to obtain the antibody or hybridoma-generated sequence. Another approach may include panning the antigen with an antibody library, which could be, for example, a phage display library, as described elsewhere, or a mammalian library. After screening the library on the antigen, enriched antibodies can be screened using methods known in the art (e.g., ELISA or SPR) to specifically bind to the antigen, as described in more detail herein.
根据第五方面的一些第二实施方式,其可以与第五方面第一实施方式相同或不同,根据第五个方面的用于获得抗体的方法是一种方法,该方法包括使用噬菌体展示文库、转基因动物或本领域可获得的用于产生包含人CDR的抗体的任何其他技术。According to some second embodiments of the fifth aspect, which may be the same as or different from the first embodiment of the fifth aspect, the method for obtaining an antibody according to the fifth aspect is a method comprising using a phage display library, a transgenic animal, or any other technique available in the art for producing an antibody containing a human CDR.
在第五方面的第二实施方式的一些实施方式A中,该方法包括使用人噬菌体展示库,参见实施例6和实施例8。例如,噬菌体展示库可以是完全人抗体噬菌体展示库(例如BioInvent n-CoDeR Fab入库)。在一些优选实施方式中,噬菌体展示文库富含酪氨酸和/或组氨酸含量。在第一步骤中,包含在其外部显示抗体或抗体片段的噬菌体的噬菌体展示文库可与根据第一方面的固定化分离多肽或根据第二方面的缀合物结合,以允许与分离的多肽或缀合物相结合。In some embodiments A of the second embodiment of the fifth aspect, the method includes using a human phage display library, see Examples 6 and 8. For example, the phage display library may be a fully human antibody phage display library (e.g., BioInvent n-CoDeR Fab library). In some preferred embodiments, the phage display library is rich in tyrosine and/or histidine. In the first step, the phage display library containing phages displaying antibodies or antibody fragments externally may be bound to an immobilized isolated peptide according to the first aspect or a conjugate according to the second aspect to allow binding to the isolated peptide or conjugate.
在可在第一步骤之前或之后进行的任选的第二耗尽步骤中,包含在其外部显示抗体或抗体片段的噬菌体的噬菌体展示文库可与不同于第一步骤的分离多肽的的根据第一方面的固定化分离多肽或缀合物组合,以耗尽脱靶结合物。In an optional second depletion step, which may be performed before or after the first step, a phage display library containing a phage displaying an antibody or antibody fragment on its exterior may be combined with an immobilized isolated polypeptide or conjugate according to the first aspect, different from the isolated polypeptide of the first step, to deplete the off-target conjugate.
在可在第一步骤之前或之后或可在第二步骤之前或之后进行的任选的第三步骤中,包含在其外部展示抗体或抗体片段的噬菌体的噬菌体展示文库可与不同于第一步骤的分离多肽和任选的第二步骤的分离多肽的根据第一方面的固定化分离多肽或根据第二方面的缀合物组合,以获得交叉反应性结合物。In an optional third step, which may be performed before or after the first step or before or after the second step, a phage display library containing an antibody or antibody fragment externally may be combined with an immobilized separation peptide according to the first aspect or a conjugate according to the second aspect, different from the separation peptide of the first step and optionally the separation peptide of the second step, to obtain a cross-reactive conjugate.
每个步骤都可以重复多次,例如一、二、三、四、五、六、七、八、九、十次或更多次。可以回收结合抗体或片段用于通过感染合适的细菌宿主进行扩增,并且可以如本领域已知的那样对DNA进行测序以获得七次跨膜受体抗体或片段的序列。Each step can be repeated multiple times, for example, one, two, three, four, five, six, seven, eight, nine, ten, or more times. The bound antibody or fragment can be recovered for amplification by infecting a suitable bacterial host, and the DNA can be sequenced as known in the art to obtain the sequence of the seven-transmembrane receptor antibody or fragment.
在第五方面的第二实施方式的一些实施方式B中,根据第五方面获得抗体的方法是一种方法,该方法包括使用由Lonberg(Lonberg,Nils.″Human antibodies fromtransgenic animals.″Nature biotechnology 23.9(2005):1117-1125)所描述的转基因动物,其全部内容通过引用并入本文。例如转基因动物可以为XenoMouse(Abgenix Inc.,Fremont,CA,e.g.U.S.Patent No.5,939,598),HuMAb小鼠(GenPharm-Medarex,San Jose,CA),RenMab小鼠(Biocytogen),或本领域已知的用于产生全人抗体的任何其他动物。In some embodiments B of the second embodiment of the fifth aspect, the method for obtaining antibodies according to the fifth aspect is a method comprising using a transgenic animal described by Lonberg (Lonberg, Nils. "Human antibodies from transgenic animals." Nature biotechnology 23.9 (2005): 1117-1125), the entire contents of which are incorporated herein by reference. For example, the transgenic animal may be a XenoMouse (Abgenix Inc., Fremont, CA, e.g. U.S. Patent No. 5,939,598), a HuMAb mouse (GenPharm-Medarex, San Jose, CA), a RenMab mouse (Biocytogen), or any other animal known in the art for producing fully human antibodies.
在第5方面的第二实施方式的一些实施方式C中,获得根据第5方面的抗体的方法是包括使用体外激活的B细胞的方法(U.S.Pat.Nos.5,567,610和5,229,275,其各自的全部内容都通过引用并入本文)。In some embodiments C of the second embodiment of aspect 5, the method of obtaining the antibody according to aspect 5 includes the use of in vitro activated B cells (U.S. Pat. Nos. 5,567,610 and 5,229,275, the entire contents of which are incorporated herein by reference).
根据第五个方面的第三实施方式,提供了一种获得抗体或抗体片段或结合物的方法,其特异性结合人和/或食蟹猴和/或鼠CC或CXC趋化因子受体,该方法包括According to the third embodiment of the fifth aspect, a method for obtaining an antibody or antibody fragment or conjugate that specifically binds to human and/or cynomolgus monkey and/or mouse CC or CXC chemokine receptors is provided, the method comprising:
a)(合成地)硫酸化包含富含酪氨酸的结构域(TRD)的多肽和a) Synthetically sulfated peptides containing tyrosine-rich domains (TRDs) and
b)选择识别硫酸化多肽的抗体、抗体片段或结合物,和b) Select antibodies, antibody fragments, or conjugates that recognize sulfated peptides, and
c)任选地产生抗体、抗体片段或结合物。c) Optionally generate antibodies, antibody fragments, or conjugates.
在一些实施方式中,根据第四方面的用途或根据第五方面的方法是获得具有如别处所述的有利特性的抗体的用途/方法,优选地其中抗体In some embodiments, the use/method of obtaining an antibody having the advantageous properties as described elsewhere is according to the fourth aspect or the fifth aspect, preferably wherein the antibody
a)包含人源CDR,和/或a) Includes human-derived CDRs, and/or
b)是人、大鼠或鼠IgG抗体,优选地人IgG1抗体或鼠IgG2a抗体,和/或b) is a human, rat, or mouse IgG antibody, preferably a human IgG1 antibody or a mouse IgG2a antibody, and/or
c)对两种不同的七次跨膜受体具有交叉反应性,和/或c) exhibits cross-reactivity to two different seven-transmembrane receptors, and/or
d)对人和食蟹猴七次跨膜受体具有交叉反应性,和/或d) Cross-reactivity with seven-transmembrane receptors in humans and cynomolgus monkeys, and/or
e)特征在于HCDR3区包含10%至34%的酪氨酸和/或2%至20%的组氨酸,优选地7%至20%的组氨酸和/或e) Characterized in that the HCDR3 region contains 10% to 34% tyrosine and/or 2% to 20% histidine, preferably 7% to 20% histidine and/or
f)不调节趋化因子受体的G蛋白非依赖性信号,和/或f) G protein-independent signaling that does not regulate chemokine receptors, and/or
g)是一种非内化抗体,或特征在于以低于同种型对照的内化的1.5、2、3、4、5、6、7或10倍内化进入具有内源靶标表达的细胞。g) is a non-internalizing antibody, or characterized by internalization into cells expressing an endogenous target at a rate of 1.5, 2, 3, 4, 5, 6, 7 or 10 times lower than that of the isotype control.
根据当前方面的方法可用于获得大量结合趋化因子受体的抗体。有趣的是,相当多的这些抗体的特征在于它们与使用其他地方描述的常规方法获得的已知抗体不同的特性。The methods described above can be used to obtain a large number of antibodies that bind to chemokine receptors. Interestingly, many of these antibodies are characterized by properties that differ from those of known antibodies obtained using conventional methods described elsewhere.
方面6-抗原定义的抗体Aspect 6 - Antigen Definition of Antibodies
根据本发明,提供了一种分离的抗体或其抗原结合片段或通过根据先前方面的方法或用途获得的结合物。According to the present invention, an isolated antibody or an antigen-binding fragment thereof, or a conjugate obtained by means or use according to the prior aspects, is provided.
如技术人员所理解的,抗体和/或结合片段本质上是“模块”的。在整个公开中,描述了包含抗体和/或结合片段的各种“模块”的各种具体方面和实施方式。作为具体的非限制性实例,描述了VH CDR、VH链、VL CDR和VL链或功能特征的各种具体实施方式。意图是所有特定实施方式可以彼此组合,如同每个特定组合被单独地明确描述一样。作为具体的非限制性实例,描述了各种特定的功能实施方式。意图是所有特定实施方式可以彼此组合,如同每个特定组合被单独地明确描述一样。As understood by those skilled in the art, antibodies and/or binding fragments are inherently "modules." Throughout this disclosure, various specific aspects and embodiments of various "modules" comprising antibodies and/or binding fragments are described. Various specific embodiments of VH CDRs, VH chains, VL CDRs, and VL chains, or functional features, are described as specific, non-limiting examples. It is intended that all specific embodiments can be combined with each other as if each specific combination were individually and explicitly described. Various specific functional embodiments are described as specific, non-limiting examples. It is intended that all specific embodiments can be combined with each other as if each specific combination were individually and explicitly described.
根据第六方面,提供了一种分离的抗体或其抗原结合片段,(具体地)结合到第一分离的硫酸化多肽,该多肽包含七次跨膜受体的富含酪氨酸结构域(TRD),其中TRD的至少25%、至少50%或至少75%的酪氨酸残基被硫酸化。优选地,第一分离的硫酸化多肽还包含七次跨膜受体的LID结构域。优选地,TRD和LID结构域之间的半胱氨酸已被移除或已被交换成不同的氨基酸。According to a sixth aspect, a separated antibody or antigen-binding fragment thereof is provided, which binds (specifically) to a first separated sulfated polypeptide comprising a tyrosine-rich domain (TRD) of a seven-transmembrane receptor, wherein at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated. Preferably, the first separated sulfated polypeptide further comprises a LID domain of the seven-transmembrane receptor. Preferably, the cysteine residue between the TRD and LID domains has been removed or exchanged for a different amino acid.
优选地,第一分离的硫酸化多肽包含七次跨膜受体的N端,其包含其富含酪氨酸的结构域(TRD)并任选地包括其LID结构域,甚至更优选地,TRD的至少25%、至少50%或至少75%的酪氨酸残基被硫酸化。Preferably, the first isolated sulfated polypeptide comprises the N-terminus of a seven-transmembrane receptor, which includes its tyrosine-rich domain (TRD) and optionally includes its LID domain; even more preferably, at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated.
在优选地实施方式中,分离的抗体或其抗原结合片段以如下KD值结合其靶标:5E-8M,<4E-8M,<3E_8M,<2E-8M,<1E_8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,或<9E-11M。例如,本发明的抗体可以以<8E-9M和>4E-10M之间的KD值结合其靶标。当分离的抗体或其抗原结合片段结合不止一个靶标时,最优选地其以相同数量级的亲和力结合其靶标。In a preferred embodiment, the isolated antibody or its antigen-binding fragment binds to its target with the following KD values: 5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, <1.5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, or <9E-11M. For example, the antibodies of the present invention can bind to their targets with KD values between <8E-9M and >4E-10M. When the isolated antibody or its antigen-binding fragment binds to more than one target, it is most preferably bound to its targets with the same order of magnitude of affinity.
根据一些优选的实施方式,分离的抗体或其抗原结合片段According to some preferred embodiments, the isolated antibody or its antigen-binding fragment...
a)包括人源CDR,和/或a) Including human CDRs, and/or
b)对人和食蟹猴具有交叉反应性,和/或b) Cross-reactivity with humans and cynomolgus monkeys, and/or
c)其特征在于HCDR3区包含10至34%的酪氨酸和/或7至20%的组氨酸,和/或c) Characterized by the HCDR3 region comprising 10 to 34% tyrosine and/or 7 to 20% histidine, and/or
d)不调节七次跨膜受体的G蛋白非依赖性信号传导,和/或d) G protein-independent signaling that does not regulate seven-transmembrane receptors, and/or
e)是非内化抗体或其特征在于以低于同种型对照的内化的1.5、2、3、4、5、6、7或10倍的内化进入具有内源靶标表达的细胞,和/或e) is a non-internalizing antibody or is characterized by internalization into cells expressing an endogenous target at a rate of 1.5, 2, 3, 4, 5, 6, 7, or 10 times lower than that of the isotype control, and/or
f)诱导ADCC和/或ADCP和/或f) Inducing ADCC and/or ADCP and/or
g)是人、大鼠或鼠IgG抗体,优选地人IgG1抗体或鼠IgG2a抗体,和/或g) is a human, rat, or mouse IgG antibody, preferably a human IgG1 antibody or a mouse IgG2a antibody, and/or
h)是scFv、Fab、Fab’或F(ab’)2片段。h) is a fragment of scFv, Fab, Fab’ or F(ab’)2.
根据第六方面的一些第一实施方式,七次跨膜受体是趋化因子受体。在这些第一实施方式中的一些中,七次跨膜受体是CC趋化因子受体或CXC趋化因子受体。在这些第一实施方式中的一些中,七次跨膜受体是CC趋化因子受体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9或CCR10。在这些第一实施方式中的一些优选实施方式中,七次跨膜受体是CCR8或CCR4。在这些第一实施方式的一些最优选的实施方式中,七次跨膜受体为CCR8。在一些第一实施方式中,七次跨膜受体是CXC趋化因子受体,例如CXCR1、CXCR2、CXCR3、CXCR4、CXCR5或CXCR6。在一些第一实施方式中,七次跨膜受体是CX3CR1或CXCR1。According to some first embodiments of the sixth aspect, the seven-transmembrane receptor is a chemokine receptor. In some of these first embodiments, the seven-transmembrane receptor is a CC chemokine receptor or a CXC chemokine receptor. In some of these first embodiments, the seven-transmembrane receptor is a CC chemokine receptor, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, or CCR10. In some preferred embodiments of these first embodiments, the seven-transmembrane receptor is CCR8 or CCR4. In some most preferred embodiments of these first embodiments, the seven-transmembrane receptor is CCR8. In some first embodiments, the seven-transmembrane receptor is a CXC chemokine receptor, such as CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, or CXCR6. In some first embodiments, the seven-transmembrane receptor is CX3CR1 or CXCR1.
根据第六方面的一些第二实施方式,其可以与第六方面第一实施方式相同或不同,七次跨膜受体可以来自表达以TRD为特征的趋化因子受体的任何物种,例如人、猴、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼。在第六方面的这些第二实施方式中的一些中,七次跨膜受体是鼠的。在第六方面的这些第二实施方式中的一些最优选的实施方式中,七次跨膜受体是人。在第六方面的这些第二实施方式中的一些中,七次跨膜受体是食蟹猴。在这些实施方式中的一些优选实施方式中,七次跨膜受体是人、食蟹猴或小鼠。在第六方面的这些优选的第二实施方式中的一些中,七次跨膜受体是人或食蟹猴。According to some second embodiments of the sixth aspect, which may be the same as or different from the first embodiment of the sixth aspect, the seven-transmembrane receptor may be derived from any species expressing a chemokine receptor characterized by TRD, such as humans, monkeys, macaques (cynomolgus monkeys), rhesus monkeys, rodents, mice, rats, horses, cattle, pigs, dogs, cats, and camels. In some of these second embodiments of the sixth aspect, the seven-transmembrane receptor is mouse. In some of the most preferred embodiments of these second embodiments of the sixth aspect, the seven-transmembrane receptor is human. In some of these second embodiments of the sixth aspect, the seven-transmembrane receptor is cynomolgus monkey. In some preferred embodiments of these embodiments, the seven-transmembrane receptor is human, cynomolgus monkey, or mouse. In some of these preferred second embodiments of the sixth aspect, the seven-transmembrane receptor is human or cynomolgus monkey.
在一些优选的实施方式中,所述七次跨膜受体是人、食蟹猴或小鼠的七次跨膜受体,并且所述七次跨膜受体为In some preferred embodiments, the seven-transmembrane receptor is a seven-transmembrane receptor from humans, cynomolgus monkeys, or mice, and the seven-transmembrane receptor is...
a)CC趋化因子受体,优选地CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9或CCR1 0,a) CCR chemokine receptors, preferably CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9 or CCR10.
b)CXC趋化因子受体,优选地CXCR1、CXCR2、CXCR3、CXCR4、CXCR5或CXCR6,或b) CXC chemokine receptors, preferably CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, or CXCR6, or
c)CX3CR1或CXCR1。c) CX3CR1 or CXCR1.
根据第6方面的一些第三实施方式,其可以与第6方面第一和/或第二实施方式相同或不同,(第一)分离的硫酸化多肽包含以下序列或与以下序列组成:According to some third embodiments of the sixth aspect, which may be the same as or different from the first and/or second embodiments of the sixth aspect, (first) the isolated sulfated polypeptide comprises or consists of the following sequences:
a)SEQ ID NO:1(CCR1_HUMAN_TRD)、SEQ ID NO:4(CCR1_HUMAN_N term)、SEQ IDNO:2(CCR1_MACFA_TRD)、SEQ ID NO:5(CCR1_MACFA_Nterm)、SEQ ID NO:3(CCR1_MOUSE_TRD)或SEQ ID NO:6(CCR1_MOUSE_N term),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 1 (CCR1_HUMAN_TRD), SEQ ID NO: 4 (CCR1_HUMAN_N term), SEQ ID NO: 2 (CCR1_MACFA_TRD), SEQ ID NO: 5 (CCR1_MACFA_N term), SEQ ID NO: 3 (CCR1_MOUSE_TRD) or SEQ ID NO: 6 (CCR1_MOUSE_N term), preferably wherein at least Y10 and/or Y18 have been sulfated, or
b)SEQ ID NO:7(CCR2_HUMAN_TRD)、SEQ ID NO:10(CCR2_HUMAN_N term)、SEQ IDNO:8(CCR2_MACMU_TRD)或SEQ ID NO:11(CCR2_MACMU_N term),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 7 (CCR2_HUMAN_TRD), SEQ ID NO: 10 (CCR2_HUMAN_N term), SEQ ID NO: 8 (CCR2_MACMU_TRD) or SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:9(CCR2_MOUSE_TRD)或SEQ ID NO:12(CCR2_MOUSE_N term),优选地其中至少Y37和/或Y39已被硫酸化,或c) SEQ ID NO: 9 (CCR2_MOUSE_TRD) or SEQ ID NO: 12 (CCR2_MOUSE_N term), preferably wherein at least Y37 and/or Y39 has been sulfated, or
d)SEQ ID NO:13(CCR3_HUMAN_TRD)或SEQ ID NO:16(CCR3_HUMAN_N term),优选地其中Y16和/或Y17已被硫酸化,或d) SEQ ID NO: 13 (CCR3_HUMAN_TRD) or SEQ ID NO: 16 (CCR3_HUMAN_N term), preferably wherein Y16 and/or Y17 have been sulfated, or
e)SEQ ID NO:14(CCR3_MACFA_TRD)或SEQ ID NO:17(CCR3_MACFA_N term),优选地其中Y16已被硫酸化,或e) SEQ ID NO: 14 (CCR3_MACFA_TRD) or SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y16 has been sulfated, or
f)SEQ ID NO:15(CCR3_MOUSE_TRD)或SEQ ID NOO:18(CCR3_MOUSE_N term),优选地其中Y20和/或Y22已被硫酸化,或f) SEQ ID NO: 15 (CCR3_MOUSE_TRD) or SEQ ID NO: 18 (CCR3_MOUSE_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
g)SEQ ID NO:19(CCR4_HUMAN_TRD)、SEQ ID NO:22(CCR4_HUMAN_N term)、SEQ IDNO:20(CCR4_MACFA_TRD)、SEQ ID NO:23(CCR4_MACFA_N term)、SEQ ID NO:21(CCR4_MOUSE_TRD)或SEQ ID NO:24(CCR4_MOUSE_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或g) SEQ ID NO: 19 (CCR4_HUMAN_TRD), SEQ ID NO: 22 (CCR4_HUMAN_N term), SEQ ID NO: 20 (CCR4_MACFA_TRD), SEQ ID NO: 23 (CCR4_MACFA_N term), SEQ ID NO: 21 (CCR4_MOUSE_TRD) or SEQ ID NO: 24 (CCR4_MOUSE_N term), preferably wherein at least Y22 has been sulfated and preferably additionally Y16, Y19 and/or Y20 has been sulfated, or
h)SEQ ID NO:25(CCR5_HUMAN_TRD)、SEQ ID NO:28(CCR5_HUMAN_N term)、SEQ IDNO:26(CCR5_MACMU_TRD)或SEQ ID NO:29(CCR5_MACMU_N term),优选地其中Y3、Y10、Y14和Y15的两个、三个或全部已被硫酸化,或h) SEQ ID NO: 25 (CCR5_HUMAN_TRD), SEQ ID NO: 28 (CCR5_HUMAN_N term), SEQ ID NO: 26 (CCR5_MACMU_TRD) or SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
i)SEQ ID NO:27(CCR5_MOUSE_TRD)或SEQ ID NO:30(CCR5_MOUSE_N term),优选地其中Y10、Y12和Y16中的两个或三个已被硫酸化,或i) SEQ ID NO: 27 (CCR5_MOUSE_TRD) or SEQ ID NO: 30 (CCR5_MOUSE_N term), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
j)SEQ ID NO:31(CCR6_HUMAN_TRD)或SEQ ID NO:34(CCR6_HUMAN_N term),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或j) SEQ ID NO: 31 (CCR6_HUMAN_TRD) or SEQ ID NO: 34 (CCR6_HUMAN_N term), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
k)SEQ ID NO:32(CCR6_MACFA_TRD)或SEQ ID NO:35(CCR6_MACFA_N term),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或k) SEQ ID NO: 32 (CCR6_MACFA_TRD) or SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
1)SEQ ID NO:33(CCR6_MOUSE_TRD)或SEQ ID NO:36(CCR6_MOUSE_N term),优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,或1) SEQ ID NO: 33 (CCR6_MOUSE_TRD) or SEQ ID NO: 36 (CCR6_MOUSE_N term), preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated, or
m)SEQ ID NO:37(CCR7_HUMAN_TRD)、SEQ ID NO:40(CCR7_HUMAN_N term)、SEQ IDNO:38(CCR7_MACFA_TRD)或SEQ ID NO:41(CCR7_MACFA_N term),优选地Y8和Y17中的一个或两个被硫酸化,或m) SEQ ID NO: 37 (CCR7_HUMAN_TRD), SEQ ID NO: 40 (CCR7_HUMAN_N term), SEQ ID NO: 38 (CCR7_MACFA_TRD) or SEQ ID NO: 41 (CCR7_MACFA_N term), preferably one or both of Y8 and Y17 are sulfated, or
n)SEQ ID NO:39(CCR7_MOUSE_TRD)或SEQ ID NO:42(CCR7_MOUSE_N term),优选地其中Y8和Y17的一个或两个以及任选的Y20已被硫酸化,或n) SEQ ID NO: 39 (CCR7_MOUSE_TRD) or SEQ ID NO: 42 (CCR7_MOUSE_N term), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
o)SEQ ID NO:43(CCR8_HUMAN_TRD)、SEQ ID NO:44(CCR8_MACFA_TRD)、SEQ IDNO:46(CCR8_HUMAN_N term,C=X或S),或SEQ ID NO:47(CCR8_MACFA_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或o) SEQ ID NO: 43 (CCR8_HUMAN_TRD), SEQ ID NO: 44 (CCR8_MACFA_TRD), SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), or SEQ ID NO: 47 (CCR8_MACFA_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
p)SEQ ID NO:45(CCR8_MOUSE_TRD)或SEQ ID NO:48(CCR8_MOUSE_N term,C=X或S),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或p) SEQ ID NO: 45 (CCR8_MOUSE_TRD) or SEQ ID NO: 48 (CCR8_MOUSE_N term, C=X or S), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
q)SEQ ID NO:61(CCR9_HUMAN_TRD)、SEQ ID NO:64(CCR9_HUMAN_N term)、SEQ IDNO:62(CCR9_MACFA_TRD)或SEQ ID NO:65(CCR9_MACFA_N term),优选地至少Y28,并且还优选地Y17和/或Y37已被硫酸化,或q) SEQ ID NO: 61 (CCR9_HUMAN_TRD), SEQ ID NO: 64 (CCR9_HUMAN_N term), SEQ ID NO: 62 (CCR9_MACFA_TRD) or SEQ ID NO: 65 (CCR9_MACFA_N term), preferably at least Y28, and even more preferably Y17 and/or Y37 have been sulfated, or
r)SEQ ID NO:63(CCR9_MOUSE_TRD)或SEQ ID NO:66(CCR9_MOUSE_N term),优选地其中至少Y28已被硫酸化,并且优选地Y19也已被硫酸化,或r) SEQ ID NO: 63 (CCR9_MOUSE_TRD) or SEQ ID NO: 66 (CCR9_MOUSE_N term), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated, or
s)SEQ ID NO:67(CCR10_HUMAN_TRD)、SEQ ID NO:70(CCR10_HUMAN_N term)、SEQID NO:68(CCR10_MACFA_TRD)或SEQ ID NO:71(CCR10_MACFA_N term),优选Y14和Y22中的至少一个或两者已被硫酸化,或s) SEQ ID NO: 67 (CCR10_HUMAN_TRD), SEQ ID NO: 70 (CCR10_HUMAN_N term), SEQ ID NO: 68 (CCR10_MACFA_TRD) or SEQ ID NO: 71 (CCR10_MACFA_N term), preferably at least one or both of Y14 and Y22 have been sulfated, or
t)SEQ ID NO:69(CCR10_MOUSE_TRD)或SEQ ID NO:72(CCR1 0_MOUSE_N term),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或t) SEQ ID NO: 69 (CCR10_MOUSE_TRD) or SEQ ID NO: 72 (CCR10_MOUSE_N term), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
u)SEQ ID NO:73(CXCR1_HUMAN_TRD)或SEQ ID NO:76(CXCR1_HUMAN_N term),优选地其中Y27已被硫酸化,或u) SEQ ID NO: 73 (CXCR1_HUMAN_TRD) or SEQ ID NO: 76 (CXCR1_HUMAN_N term), preferably wherein Y27 has been sulfated, or
v)SEQ ID NO:74(CXCR1_MACFA_TRD)或SEQ ID NO:77(CXCR1_MACFA_N term),优选地其中Y14和Y28中的至少一个已被硫酸化,或v) SEQ ID NO: 74 (CXCR1_MACFA_TRD) or SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein at least one of Y14 and Y28 has been sulfated, or
w)SEQ ID NO:75(CXCR1_MOUSE_TRD)或SEQ ID NO:78(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化,或w) SEQ ID NO: 75 (CXCR1_MOUSE_TRD) or SEQ ID NO: 78 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated, or
x)SEQ ID NO:79(CXCR2_HUMAN_TRD)或SEQ ID NO:82(CXCR2_HUMAN_N term),优选地其中Y23和/或Y25已被硫酸化,或x) SEQ ID NO: 79 (CXCR2_HUMAN_TRD) or SEQ ID NO: 82 (CXCR2_HUMAN_N term), preferably wherein Y23 and/or Y25 have been sulfated, or
y)SEQ ID NO:80(CXCR2_MACFA_TRD)或SEQ ID NO:83(CXCR2_MACFA_N term),优选地其中Y20和/或Y22已被硫酸化,或y) SEQ ID NO: 80 (CXCR2_MACFA_TRD) or SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
z)SEQ ID NO:81(CXCR2_MOUSE_TRD)或SEQ ID NO:84(CXCR2_MOUSE_N term),优选地其中Y24已被硫酸化,或z) SEQ ID NO: 81 (CXCR2_MOUSE_TRD) or SEQ ID NO: 84 (CXCR2_MOUSE_N term), preferably wherein Y24 has been sulfated, or
aa)SEQ ID NO:85(CXCR3_HUMAN_TRD)、SEQ ID NO:88(CXCR3_HUMAN_N term)、SEQID NO:86(CXCR3_MACFA_TRD)、SEQ ID NO:89(CXCR3_MACFA_N term)、SEQ ID NO:87(CXCR3_MOUSE_TRD)或SEQ ID NO:90(CXCR3_MOUSE_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或aa) SEQ ID NO: 85 (CXCR3_HUMAN_TRD), SEQ ID NO: 88 (CXCR3_HUMAN_N term), SEQ ID NO: 86 (CXCR3_MACFA_TRD), SEQ ID NO: 89 (CXCR3_MACFA_N term), SEQ ID NO: 87 (CXCR3_MOUSE_TRD) or SEQ ID NO: 90 (CXCR3_MOUSE_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
bb)SEQ ID NO:91(CXCR4_HUMAN_TRD)、SEQ ID NO:94(CXCR4_HUMAN_N term)、SEQID NO:92(CXCR4_MACFA_TRD)或SEQ ID NO:95(CXCR4_MACFA_N term),优选地其中至少Y12和/或Y21已被硫酸化,或bb)SEQ ID NO: 91 (CXCR4_HUMAN_TRD), SEQ ID NO: 94 (CXCR4_HUMAN_N term), SEQ ID NO: 92 (CXCR4_MACFA_TRD) or SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 have been sulfated, or
cc)SEQ ID NO:93(CXCR4_MOUSE_TRD)或SEQ ID NO:96(CXCR4_MOUSE_N term),优选地其中至少Y23和/或Y14已被硫酸化,或cc) SEQ ID NO: 93 (CXCR4_MOUSE_TRD) or SEQ ID NO: 96 (CXCR4_MOUSE_N term), preferably wherein at least Y23 and/or Y14 has been sulfated, or
dd)SEQ ID NO:97(CXCR5_HUMAN_TRD)、SEQ ID NO:100(CXCR5_HUMAN_N term)、SEQ ID NO:98(CXCR5_MACFA_TRD)或SEQ ID NO:101(CXCR5_MACFA_N term),优选地Y3和Y27中的至少一个已被硫酸化,或dd) SEQ ID NO: 97 (CXCR5_HUMAN_TRD), SEQ ID NO: 100 (CXCR5_HUMAN_N term), SEQ ID NO: 98 (CXCR5_MACFA_TRD) or SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably at least one of Y3 and Y27 has been sulfated, or
ee)SEQ ID NO:99(CXCR5_MOUSE_TRD)或SEQ ID NO:102(CXCR5_MOUSE_N term),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或ee) SEQ ID NO: 99 (CXCR5_MOUSE_TRD) or SEQ ID NO: 102 (CXCR5_MOUSE_N term), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
ff)SEQ ID NO:103(CXCR6_HUMAN_TRD)或SEQ ID NO:106(CXCR6_HUMAN_N term),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或ff)SEQ ID NO: 103 (CXCR6_HUMAN_TRD) or SEQ ID NO: 106 (CXCR6_HUMAN_N term), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
gg)SEQ ID No:104(CXCR6_MACFA_TRD)或SEQ ID NO:107(CXCR6_MACFA_N term),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或gg)SEQ ID No: 104 (CXCR6_MACFA_TRD) or SEQ ID No: 107 (CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
hh)SEQ ID NO:105(CXCR6_MOUSE_TRD)或SEQ ID NO:108(CXCR6_MOUSE_N term),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或hh)SEQ ID NO: 105 (CXCR6_MOUSE_TRD) or SEQ ID NO: 108 (CXCR6_MOUSE_N term), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
ii)SEQ ID NO:157(CX3CR1_HUMAN_TRD)或SEQ ID NO:160(CX3CR1_HUMAN_Nterm),优选地其中至少Y14已被硫酸化,或ii) SEQ ID NO: 157 (CX3CR1_HUMAN_TRD) or SEQ ID NO: 160 (CX3CR1_HUMAN_Nterm), preferably wherein at least Y14 has been sulfated, or
jj)SEQ ID NO:158(CX3CR1_MACFA_TRD),优选地其中至少Y20已被硫酸化,或jj)SEQ ID NO: 158(CX3CR1_MACFA_TRD), preferably wherein at least Y20 has been sulfated, or
kk)SEQ ID NO:161(CX3CR1_MACFA_N term),优选地其中至少Y20或Y22已被硫酸化,或kk)SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
1l)SEQ ID NO:159(CX3CR1_MOUSE_TRD)或SEQ ID NO:162(CX3CR1_MOUSE_Nterm),优选地其中至少Y15已被硫酸化,或1l) SEQ ID NO: 159 (CX3CR1_MOUSE_TRD) or SEQ ID NO: 162 (CX3CR1_MOUSE_Nterm), preferably wherein at least Y15 has been sulfated, or
mm)SEQ ID NO:163(CXCR1_HUMAN_TRD)或SEQ ID NO:166(CXCR1_HUMAN_N term),优选地其中至少Y27已被硫酸化,或mm) SEQ ID NO: 163 (CXCR1_HUMAN_TRD) or SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated, or
nn)SEQ ID NO:164(CXCR1_MACMU_TRD),优选地其中至少Y14已被硫酸化,或nn)SEQ ID NO: 164(CXCR1_MACMU_TRD), preferably wherein at least Y14 has been sulfated, or
oo)SEQ ID NO:167(CXCR1_MACMU_N term),优选地其中至少Y14或Y28已被硫酸化,或oo)SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated, or
pp)SEQ ID NO:165(CXCR1_MOUSE_TRD)或SEQ ID NO:168(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化。pp) SEQ ID NO: 165 (CXCR1_MOUSE_TRD) or SEQ ID NO: 168 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated.
根据第六方面的第三实施方式的一些实施方式A,(第一)分离的硫酸化多肽包含或由以下序列组成:According to some embodiments A of the third embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or consists of the following sequences:
a.SEQ ID NO:1(CCR1_HUMAN_TRD),优选地其中至少Y10和/或Y18已被硫酸化,或a. SEQ ID NO: 1 (CCR1_HUMAN_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b.SEQ ID NO:7(CCR2_HUMAN_TRD),优选地其中至少Y26已被硫酸化,或b. SEQ ID NO: 7 (CCR2_HUMAN_TRD), preferably wherein at least Y26 has been sulfated, or
c.SEQ ID NO:13(CCR3_HUMAN_TRD),优选地其中Y16和/或Y17已被硫酸化,或c. SEQ ID NO: 13 (CCR3_HUMAN_TRD), preferably wherein Y16 and/or Y17 have been sulfated, or
d.SEQ ID NO:19(CCR4_HUMAN_TRD),优选地其中至少Y22已被硫酸化,并且优选地Y16、Y19和/或Y20已被硫酸化;或d. SEQ ID NO: 19 (CCR4_HUMAN_TRD), preferably wherein at least Y22 has been sulfated, and preferably Y16, Y19 and/or Y20 have been sulfated; or
e.SEQ ID NO:25(CCR5_HUMAN_TRD),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,或e.SEQ ID NO: 25 (CCR5_HUMAN_TRD), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f.SEQ ID NO:31(CCR6_HUMAN_TRD),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或f. SEQ ID NO: 31 (CCR6_HUMAN_TRD), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
g.SEQ ID NO:37(CCR7_HUMAN_TRD),优选地其中Y8和Y17中的一个或两个已被硫酸化,或g. SEQ ID NO: 37 (CCR7_HUMAN_TRD), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h.SEQ ID NO:43(CCR8_HUMAN_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h.SEQ ID NO: 43 (CCR8_HUMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i.SEQ ID NO:61(CCR9_HUMAN_TRD),优选地Y17和/或Y37也已被硫酸化,或i. SEQ ID NO: 61 (CCR9_HUMAN_TRD), preferably Y17 and/or Y37 have also been sulfated, or
j.SEQ ID NO:67(CCR10_HUMAN_TRD),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j.SEQ ID NO: 67 (CCR10_HUMAN_TRD), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k.SEQ ID NO:73(CXCR1_HUMAN_TRD),优选地其中Y27已被硫酸化,或k.SEQ ID NO: 73 (CXCR1_HUMAN_TRD), preferably wherein Y27 has been sulfated, or
l.SEQ ID NO:79(CXCR2_HUMAN_TRD),优选地其中Y23和/或Y25已被硫酸化,或l.SEQ ID NO: 79 (CXCR2_HUMAN_TRD), preferably wherein Y23 and/or Y25 have been sulfated, or
m.SEQ ID NO:85(CXCR3_HUMAN_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m.SEQ ID NO: 85(CXCR3_HUMAN_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n.SEQ ID NO:91(CXCR4_HUMAN_TRD),优选地其中至少Y12和/或Y21已被硫酸化,或n.SEQ ID NO: 91(CXCR4_HUMAN_TRD), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o.SEQ ID NO:97(CXCR5_HUMAN_TRD),优选地其中Y3和Y27中的至少一个已被硫酸化,或o.SEQ ID NO: 97 (CXCR5_HUMAN_TRD), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p.SEQ ID NO:103(CXCR6_HUMAN_TRD),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或p.SEQ ID NO: 103 (CXCR6_HUMAN_TRD), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
q.SEQ ID NO:157(CX3CR1_HUMAN_TRD),优选地其中至少Y14已被硫酸化,或q.SEQ ID NO: 157(CX3CR1_HUMAN_TRD), preferably wherein at least Y14 has been sulfated, or
r.SEQ ID NO:163(CXCR1_HUMAN_TRD),优选地其中至少Y27已被硫酸化。r.SEQ ID NO: 163(CXCR1_HUMAN_TRD), preferably wherein at least Y27 has been sulfated.
根据第六方面的第三实施方式的一些实施方式B,(第一)分离的硫酸化多肽包含以下序列或由以下序列组成:According to some embodiments B of the third embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or is composed of the following sequences:
a)SEQ ID NO:3(CCR1_MOUSE_TRD),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 3 (CCR1_MOUSE_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:9(CCR2_MOUSE_TRD),优选地其中至少Y37和/或Y39已被硫酸化,或b) SEQ ID NO: 9 (CCR2_MOUSE_TRD), preferably wherein at least Y37 and/or Y39 has been sulfated, or
c)SEQ ID NO:15(CCR3_MOUSE_TRD),优选地其中Y20和/或Y22已被硫酸化,或c) SEQ ID NO: 15 (CCR3_MOUSE_TRD), preferably wherein Y20 and/or Y22 have been sulfated, or
d)SEQ ID NO:21(CCR4_MOUSE_TRD),优选地其中至少Y22已被硫酸化,并且优选地此外Y16、Y19和/或Y20已被硫酸化;或d) SEQ ID NO: 21 (CCR4_MOUSE_TRD), preferably wherein at least Y22 has been sulfated, and preferably in addition, Y16, Y19 and/or Y20 have been sulfated; or
e)SEQ ID NO:27(CCR5_MOUSE_TRD),优选地其中Y1 0、Y12和Y16中的两个或三个已被硫酸化,或e) SEQ ID NO: 27 (CCR5_MOUSE_TRD), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
f)SEQ ID NO:33(CCR6_MOUSE_TRD),优选地其中Y13、Y18和Y19中的两个或三个已被硫酸化,或f) SEQ ID NO: 33 (CCR6_MOUSE_TRD), preferably wherein two or three of Y13, Y18 and Y19 have been sulfated, or
g)SEQ ID NO:39(CCR7_MOUSE_TRD),优选地其中Y8和Y17中的一个或两个以及任选地Y20已被硫酸化,或g) SEQ ID NO: 39 (CCR7_MOUSE_TRD), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
h)SEQ ID NO:45(CCR8_MOUSE_TRD),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 45 (CCR8_MOUSE_TRD), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
i)SEQ ID NO:63(CCR9_MOUSE_TRD),优选地其中至少Y28已被硫酸化,且优选地Y19也已被硫酸化;或i) SEQ ID NO: 63 (CCR9_MOUSE_TRD), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated; or
j)SEQ ID NO:69(CCR1 0_MOUSE_TRD),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或j) SEQ ID NO: 69 (CCR1 0_MOUSE_TRD), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
k)SEQ ID NO:75(CXCR1_MOUSE_TRD),优选地其中至少Y6已被硫酸化,或k)SEQ ID NO: 75(CXCR1_MOUSE_TRD), preferably wherein at least Y6 has been sulfated, or
1)SEQ ID NO:81(CXCR2_MOUSE_TRD),优选地其中Y24已被硫酸化,或1) SEQ ID NO: 81 (CXCR2_MOUSE_TRD), preferably wherein Y24 has been sulfated, or
m)SEQ ID NO:87(CXCR3_MOUSE_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 87(CXCR3_MOUSE_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:93(CXCR4_MOUSE_TRD),优选地其中至少Y23和/或Y14已被硫酸化,或n)SEQ ID NO: 93 (CXCR4_MOUSE_TRD), preferably wherein at least Y23 and/or Y14 has been sulfated, or
o)SEQ ID NO:99(CXCR5_MOUSE_TRD),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或o)SEQ ID NO: 99(CXCR5_MOUSE_TRD), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
p)SEQ ID NO:105(CXCR6_MOUSE_TRD),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 105(CXCR6_MOUSE_TRD), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
q)SEQ ID NO:159(CX3CR1_MOUSE_TRD),优选地其中至少Y15已被硫酸化,或q)SEQ ID NO: 159 (CX3CR1_MOUSE_TRD), preferably wherein at least Y15 has been sulfated, or
r)SEQ ID NO:165(CXCR1_MOUSE_TRD),优选地其中至少Y6已被硫酸化。r)SEQ ID NO: 165(CXCR1_MOUSE_TRD), preferably wherein at least Y6 has been sulfated.
根据第六方面的第三实施方式的一些实施方式C,(第一)分离的硫酸化多肽包含以下序列或由以下序列组成:According to some embodiments C of the third embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or is composed of the following sequences:
a)SEQ ID NO:2(CCR1_MACFA_TRD),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 2 (CCR1_MACFA_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:8(CCR2_MACMU_TRD),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 8 (CCR2_MACMU_TRD), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:14(CCR3_MACFA_TRD),优选地其中Y16已被硫酸化,或c) SEQ ID NO: 14 (CCR3_MACFA_TRD), preferably wherein Y16 has been sulfated, or
d)SEQ ID NO:20(CCR4_MACFA_TRD),优选地其中至少Y22已被硫酸化,并且优选地Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 20 (CCR4_MACFA_TRD), preferably wherein at least Y22 has been sulfated, and preferably Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:26(CCR5_MACMU_TRD),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,或e) SEQ ID NO: 26 (CCR5_MACMU_TRD), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f)SEQ ID NO:32(CCR6_MACFA_TRD),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或f) SEQ ID NO: 32 (CCR6_MACFA_TRD), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
g)SEQ ID NO:38(CCR7_MACFA_TRD),优选地其中Y8和Y17中的一个或两个已被硫酸化,或g) SEQ ID NO: 38 (CCR7_MACFA_TRD), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h)SEQ ID NO:44(CCR8_MACFA_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 44 (CCR8_MACFA_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i)SEQ ID NO:62(CCR9_MACFA_TRD),优选地其中至少Y28,优选地Y17和/或Y37也已被硫酸化,或i) SEQ ID NO: 62 (CCR9_MACFA_TRD), preferably wherein at least Y28, preferably Y17 and/or Y37 have also been sulfated, or
j)SEQ ID NO:68(CCR10_MACFA_TRD),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j) SEQ ID NO: 68 (CCR10_MACFA_TRD), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k)SEQ ID NO:74(CXCR1_MACFA_TRD),优选地其中Y14和Y28中的至少一个已被硫酸化,或k)SEQ ID NO: 74(CXCR1_MACFA_TRD), preferably wherein at least one of Y14 and Y28 has been sulfated, or
l)SEQ ID NO:80(CXCR2_MACFA_TRD),优选地其中Y20和/或Y22已被硫酸化,或l) SEQ ID NO: 80 (CXCR2_MACFA_TRD), preferably wherein Y20 and/or Y22 have been sulfated, or
m)SEQ ID NO:86(CXCR3_MACFA_TRD),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 86(CXCR3_MACFA_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:92(CXCR4_MACFA_TRD),优选地其中至少Y12和/或Y21已被硫酸化,或n)SEQ ID NO: 92 (CXCR4_MACFA_TRD), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o)SEQ ID NO:98(CXCR5_MACFA_TRD),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 98(CXCR5_MACFA_TRD), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:104(CXCR6_MACFA_TRD),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或p)SEQ ID NO: 104(CXCR6_MACFA_TRD), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
q)SEQ ID NO:158(CX3C R1_MACFA_TRD),优选地其中至少Y20已被硫酸化,或q)SEQ ID NO: 158 (CX3C R1_MACFA_TRD), preferably wherein at least Y20 has been sulfated, or
r)SEQ ID NO:164(CXCR1_MACMU_TRD),优选地其中至少Y14已被硫酸化。r)SEQ ID NO: 164(CXCR1_MACMU_TRD), preferably wherein at least Y14 has been sulfated.
根据第六方面的一些第四实施方式,其可以与第六方面第一、第二和/或第三实施方式相同或不相同,第一分离的硫酸化多肽包含含有富含酪氨酸的结构域(TRD)和优选LID结构域的七次跨膜受体的N端,并且TRD的至少25%、至少50%或至少75%的酪氨酸残基被硫酸化,优选其中至少一个/位于TRD和LID结构域之间的半胱氨酸被移除或被交换成不同的氨基酸。According to some fourth embodiments of the sixth aspect, which may be the same as or different from the first, second and/or third embodiments of the sixth aspect, the first isolated sulfated polypeptide comprises an N-terminus of a seven-transmembrane receptor containing a tyrosine-rich domain (TRD) and preferably a LID domain, and at least 25%, at least 50% or at least 75% of the tyrosine residues of the TRD are sulfated, preferably at least one cysteine located between the TRD and LID domains is removed or exchanged for a different amino acid.
根据第六方面的第四实施方式的一些实施方式A,(第一)分离的硫酸化多肽包含以下序列或由以下序列组成:According to some embodiments A of the fourth embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or is composed of the following sequences:
a)SEQ ID NO:4(CCR1_HUMAN_N term),优选地其中至少Y10和/或Y18已被硫酸化,a) SEQ ID NO: 4 (CCR1_HUMAN_N term), preferably wherein at least Y10 and/or Y18 has been sulfated.
b)SEQ ID NO:10(CCR2_HUMAN_N term),优选地其中至少Y26已被硫酸化,b) SEQ ID NO: 10 (CCR2_HUMAN_N term), preferably wherein at least Y26 has been sulfated.
c)SEQ ID NO:16(CCR3_HUMAN_N term),优选地其中Y16和/或Y17已被硫酸化,c) SEQ ID NO: 16 (CCR3_HUMAN_N term), preferably wherein Y16 and/or Y17 have been sulfated.
d)SEQ ID NO:22(CCR4_HUMAN_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,d) SEQ ID NO: 22 (CCR4_HUMAN_N term), preferably wherein at least Y22 has been sulfated and preferably in addition, Y16, Y19 and/or Y20 have been sulfated.
e)SEQ ID NO:28(CCR5_HUMAN_N term),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,e) SEQ ID NO: 28 (CCR5_HUMAN_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated.
f)SEQ ID NO:34(CCR6_HUMAN_N term),优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,f) SEQ ID NO: 34 (CCR6_HUMAN_N term), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated.
g)SEQ ID NO:40(CCR7_HUMAN_N term),优选地其中Y8和Y17中的一个或两个已被硫酸化,g) SEQ ID NO: 40 (CCR7_HUMAN_N term), preferably wherein one or both of Y8 and Y17 have been sulfated.
h)SEQ ID NO:46(CCR8_HUMAN_N term),优选地其中Y3、Y15和Y17的至少两个或全部已被硫酸化,h) SEQ ID NO: 46 (CCR8_HUMAN_N term), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
i)SEQ ID NO:64(CCR9_HUMAN_N term),优选地其中至少Y28,并且优选地Y17和/或Y37已被硫酸化,i) SEQ ID NO: 64 (CCR9_HUMAN_N term), preferably wherein at least Y28, and preferably Y17 and/or Y37, has been sulfated.
j)SEQ ID NO:70(CCR10_HUMAN_N term),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,j) SEQ ID NO: 70 (CCR10_HUMAN_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated.
k)SEQ ID NO:76(CXCR1_HUMAN_N term),优选地其中Y27已被硫酸化,k)SEQ ID NO: 76 (CXCR1_HUMAN_N term), preferably wherein Y27 has been sulfated.
l)SEQ ID NO:82(CXCR2_HUMAN_N term),优选地其中Y23和/或Y25已被硫酸化,l) SEQ ID NO: 82 (CXCR2_HUMAN_N term), preferably wherein Y23 and/or Y25 have been sulfated.
m)SEQ ID NO:88(CXCR3_HUMAN_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,m)SEQ ID NO: 88 (CXCR3_HUMAN_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated.
n)SEQ ID NO:94(CXCR4_HUMAN_N term),优选地其中至少Y12和/或Y21已被硫酸化,n)SEQ ID NO: 94 (CXCR4_HUMAN_N term), preferably wherein at least Y12 and/or Y21 has been sulfated,
o)SEQ ID NO:100(CXCR5_HUMAN_N term),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 100 (CXCR5_HUMAN_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:106(CXCR6_HUMAN_N term),优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 106 (CXCR6_HUMAN_N term), preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
q)SEQ ID NO:160(CX3CR1_HUMAN_N term),优选地其中至少Y14已被硫酸化,或q)SEQ ID NO: 160 (CX3CR1_HUMAN_N term), preferably wherein at least Y14 has been sulfated, or
r)SEQ ID NO:166(CXCR1_HUMAN_N term),优选地其中至少Y27已被硫酸化。r)SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated.
根据第六方面的第四实施方式的一些实施方式B,(第一)分离的硫酸化多肽包含以下序列或由以下序列组成:According to some embodiments B of the fourth embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or is composed of the following sequences:
a)SEQ ID NO:6(CCR1_MOUSE_N term),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 6 (CCR1_MOUSE_N term), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:12(CCR2_MOUSE_N term),优选地其中至少Y37和/或Y39已被硫酸化,或b) SEQ ID NO: 12 (CCR2_MOUSE_N term), preferably wherein at least Y37 and/or Y39 has been sulfated, or
c)SEQ ID NO:18(CCR3_MOUSE_N term),优选地其中Y20和/或Y22已被硫酸化,或c) SEQ ID NO: 18 (CCR3_MOUSE_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
d)SEQ ID NO:24(CCR4_MOUSE_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 24 (CCR4_MOUSE_N term), preferably wherein at least Y22 has been sulfated and preferably in addition, Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:30(CCR5_MOUSE_N term),优选地其中Y10、Y12和Y16中的两个或三个已被硫酸化,或e) SEQ ID NO: 30 (CCR5_MOUSE_N term), preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
f)SEQ ID NO:36(CCR6_MOUSE_N term),优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,f) SEQ ID NO: 36 (CCR6_MOUSE_N term), preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated.
g)SEQ ID NO:42(CCR7_MOUSE_N term),优选地其中Y8和Y17中的一个或两个以及任选的Y20已被硫酸化,或g) SEQ ID NO: 42 (CCR7_MOUSE_N term), preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
h)SEQ ID NO:48(CCR8_MOUSE_N term,C=X或S),优选地h) SEQ ID NO: 48 (CCR8_MOUSE_N term, C = X or S), preferably
其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或Of which at least two or all of Y3, Y14 and Y15 have been sulfated, or
i)SEQ ID NO:66(CCR9_MOUSE_N term),优选地其中至少Y28已被硫酸化,并且优选地Y19也已被硫酸化,或i) SEQ ID NO: 66 (CCR9_MOUSE_N term), preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated, or
j)SEQ ID NO:72(CCR10_MOUSE_N term),优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或j) SEQ ID NO: 72 (CCR10_MOUSE_N term), preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
k)SEQ ID NO:78(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化,或k)SEQ ID NO: 78 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated, or
l)SEQ ID NO:84(CXCR2_MOUSE_N term),优选地其中Y24已被硫酸化,或l) SEQ ID NO: 84 (CXCR2_MOUSE_N term), preferably wherein Y24 has been sulfated, or
m)SEQ ID NO:90(CXCR3_MOUSE_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 90 (CXCR3_MOUSE_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:96(CXCR4_MOUSE_N term),优选地其中至少Y13和/或Y14已被硫酸化,或n)SEQ ID NO: 96 (CXCR4_MOUSE_N term), preferably wherein at least Y13 and/or Y14 has been sulfated, or
o)SEQ ID NO:102(CXCR5_MOUSE_N term),优选地其中至少Y3和/或Y14和/或Y20和/或Y26已被硫酸化,或o)SEQ ID NO: 102 (CXCR5_MOUSE_N term), preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y26 have been sulfated, or
p)SEQ ID NO:108(CXCR6_MOUSE_N term),优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或p)SEQ ID NO: 108 (CXCR6_MOUSE_N term), preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
q)SEQ ID NO:162(CX3CR1_MOUSE_N term),优选地其中至少Y15已被硫酸化,或q)SEQ ID NO: 162 (CX3CR1_MOUSE_N term), preferably wherein at least Y15 has been sulfated, or
r)SEQ ID NO:168(CXCR1_MOUSE_N term),优选地其中至少Y6已被硫酸化。r)SEQ ID NO: 168 (CXCR1_MOUSE_N term), preferably wherein at least Y6 has been sulfated.
根据第六方面的第四实施方式的一些实施方式C,(第一)分离的硫酸化多肽包含以下序列或由以下序列组成:According to some embodiments C of the fourth embodiment of the sixth aspect, (first) the isolated sulfated polypeptide comprises or is composed of the following sequences:
a)SEQ ID NO:5(CCR1_MACFA_N term),优选地其中至少Y10和/或Y18已被硫酸化,或a) SEQ ID NO: 5 (CCR1_MACFA_N term), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)SEQ ID NO:11(CCR2_MACMU_N term),优选地其中至少Y26已被硫酸化,或b) SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated, or
c)SEQ ID NO:17(CCR3_MACFA_N term),优选地其中Y1 6已被硫酸化,或c) SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y1 6 has been sulfated, or
d)SEQ ID NO:23(CCR4_MACFA_N term),优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,或d) SEQ ID NO: 23 (CCR4_MACFA_N term), preferably wherein at least Y22 has been sulfated and preferably in addition, Y16, Y19 and/or Y20 have been sulfated, or
e)SEQ ID NO:29(CCR5_MACMU_N term),优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,或e) SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, or
f)SEQ ID NO:35(CCR6_MACFA_N term),优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或f) SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
g)SEQ ID NO:41(CCR7_MACFA_N term),优选地其中Y8和Y17中地一个或两个已被硫酸化,或g) SEQ ID NO: 41 (CCR7_MACFA_N term), preferably wherein one or both of Y8 and Y17 have been sulfated, or
h)SEQ ID NO:47(CCR8_MACFA_N term),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或h) SEQ ID NO: 47 (CCR8_MACFA_N term), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
i)SEQ ID NO:65(CCR9_MACFA_N term),优选地其中至少Y28,并且优选地Y17和/或Y37已被硫酸化,或i) SEQ ID NO: 65 (CCR9_MACFA_N term), preferably wherein at least Y28, and preferably Y17 and/or Y37 have been sulfated, or
j)SEQ ID NO:71(CCR10_MACFA_N term),优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或j) SEQ ID NO: 71 (CCR10_MACFA_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
k)SEQ ID NO:77(CXCR1_MACFA_N term),优选地其中Y14和Y28中的至少一个已被硫酸化,或k)SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein at least one of Y14 and Y28 has been sulfated, or
1)SEQ ID NO:83(CXCR2_MACFA_N term),优选地其中Y20和/或Y22已被硫酸化,或1) SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated, or
m)SEQ ID NO:89(CXCR3_MACFA_N term),优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或m)SEQ ID NO: 89 (CXCR3_MACFA_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
n)SEQ ID NO:95(CXCR4_MACFA_N term),优选地其中至少Y12和/或Y21已被硫酸化,或n)SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 has been sulfated, or
o)SEQ ID NO:101(CXCR5_MACFA_N term),优选地其中Y3和Y27中的至少一个已被硫酸化,或o)SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)SEQ ID NO:107(CXCR6_MACFA_N term),优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或p)SEQ ID NO: 107 (CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
q)SEQ ID NO:161(CX3CR1_MACFA_N term),优选地其中至少Y20或Y22已被硫酸化,或q)SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
r)SEQ ID NO:167(CXCR1_MACMU_N term),优选地其中至少Y14或Y28已被硫酸化。r)SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated.
根据第六方面的一些第五实施方式,其可以与第六方面中的第一、第二、第三和/或第四实施方式相同或不同,分离的抗体或其抗原结合片段(具体地)与包含七次跨膜受体的富含酪氨酸结构域(TRD)的第二分离的硫酸化多肽结合。According to some fifth embodiments of the sixth aspect, which may be the same as or different from the first, second, third and/or fourth embodiments of the sixth aspect, the isolated antibody or its antigen-binding fragment (specifically) binds to a second isolated sulfated polypeptide containing a tyrosine-rich domain (TRD) of a seven-transmembrane receptor.
优选地,第二分离的硫酸化多肽包含的TRD的七次跨膜受体Preferably, the second isolated sulfated polypeptide contains a seven-transmembrane receptor for TRD.
a)不同于第一分离的硫酸化多肽所包含的TRD的七次跨膜受体,或a) A seven-transmembrane receptor for TRD, unlike the first isolated sulfated polypeptide.
b)第一分离的硫酸化多肽包含的TRD的相应的七次跨膜受体,但来自不同的物种。b) The first isolated sulfated polypeptide contained the corresponding seven transmembrane receptors for TRD, but from different species.
根据一些优选实施方式,包含七次跨膜受体的富含酪氨酸结构域(TRD)的第二分离的硫酸化多肽不同于包含七次跨膜受体的富含酪氨酸结构区(TRD)的第一分离的硫酸化多肽,并且是具有根据第六方面的第三和/或第四实施方式的实施方式A、B或C中任一项的序列的第一分离多肽。例如,第一分离的硫酸化多肽可包含第一物种的七次跨膜受体的TRD,第二分离的硫酸化多肽可包含第二物种的七次跨膜受体的TRD,优选地其中所述物种是人和食蟹猴,或人和小鼠,或人与大鼠。According to some preferred embodiments, a second isolated sulfated polypeptide comprising a tyrosine-rich domain (TRD) of a seven-transmembrane receptor differs from a first isolated sulfated polypeptide comprising a tyrosine-rich domain (TRD) of a seven-transmembrane receptor, and is a first isolated polypeptide having a sequence of any one of embodiments A, B, or C according to the third and/or fourth embodiments of the sixth aspect. For example, the first isolated sulfated polypeptide may comprise a TRD of a seven-transmembrane receptor of a first species, and the second isolated sulfated polypeptide may comprise a TRD of a seven-transmembrane receptor of a second species, preferably wherein said species is human and cynomolgus monkey, or human and mouse, or human and rat.
根据第六方面的第五实施方式的一些实施方式A,抗体或片段特异性结合According to some embodiments A of the fifth embodiment of the sixth aspect, antibody or fragment specific binding
a)包含SEQ ID NO:1(CCR1_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y10和/或Y18已被硫酸化,和包含SEQ ID Nv:2(CCR1_MACFA TRD)的第二分离的硫酸化多肽,优选地其中至少Y1 0和/或Y18已被硫酸化,或a) A first isolated sulfated polypeptide comprising SEQ ID NO: 1 (CCR1_HUMAN_TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID Nv: 2 (CCR1_MACFA TRD), preferably wherein at least Y10 and/or Y18 has been sulfated, or
b)包含SEQ ID NO:7(CCR2_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y26已被硫酸化,和包含SEQ ID NO:8(CCL2_MACMU_TRD)的第二分离的硫酸化多肽,优选地其中至少Y26已被硫酸化,或b) A first isolated sulfated polypeptide comprising SEQ ID NO: 7 (CCR2_HUMAN_TRD), preferably wherein at least Y26 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 8 (CCL2_MACMU_TRD), preferably wherein at least Y26 has been sulfated, or
c)包含SEQ ID NO:13(CCR3_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y16和/或Y17已被硫酸化,和包含SEQ ID NO:14(CCR3_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y16已被硫酸化;或c) A first isolated sulfated polypeptide comprising SEQ ID NO: 13 (CCR3_HUMAN_TRD), preferably wherein Y16 and/or Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 14 (CCR3_MACFA_TRD), preferably wherein Y16 has been sulfated; or
d)包含SEQ ID NO:19(CCR4_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y22已被硫酸化,并且优选地Y16、Y19和/或Y20已被硫酸化,和包含SEQ ID NO:20(CCR4_MACFA_TRD)的第二分离的硫酸化多肽,优选地至少Y22已被硫酸化,优选地此外Y16、Y19和/或Y20已被硫酸化,或d) A first isolated sulfated polypeptide comprising SEQ ID NO: 19 (CCR4_HUMAN_TRD), preferably wherein at least Y22 has been sulfated, and preferably Y16, Y19 and/or Y20 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 20 (CCR4_MACFA_TRD), preferably wherein at least Y22 has been sulfated, and preferably further preferably Y16, Y19 and/or Y20 has been sulfated, or
e)包含SEQ ID NO:25(CCR5_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,和包含SEQ ID NO:26(CCR5_MACMU_TRD)的第二分离的硫酸化多肽,优选地Y3、Y20、Y15和Y15中的两个、三个或全部已被硫酸化;或e) A first isolated sulfated polypeptide comprising SEQ ID NO: 25 (CCR5_HUMAN_TRD), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 26 (CCR5_MACMU_TRD), preferably wherein two, three, or all of Y3, Y20, Y15, and Y15 have been sulfated; or
f)包含SEQ ID NO:31(CCR6_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,和包含SEQ ID NO:32(CCR6_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y23、Y31和Y32中的至少二个或三个已被硫酸化,或f) A first isolated sulfated polypeptide comprising SEQ ID NO: 31 (CCR6_HUMAN_TRD), preferably wherein at least two or three of Y18, Y26, and Y27 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 32 (CCR6_MACFA_TRD), preferably wherein at least two or three of Y23, Y31, and Y32 have been sulfated, or
g)包含SEQ ID NO:37(CCR7_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y8和Y17中的一个或两个已被硫酸化,和包含SEQ ID NO:38(CCR7_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y18和Y17中的一个或两个已被硫酸化,或g) A first isolated sulfated polypeptide comprising SEQ ID NO: 37 (CCR7_HUMAN_TRD), preferably wherein one or both of Y8 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 38 (CCR7_MACFA_TRD), preferably wherein one or both of Y18 and Y17 have been sulfated, or
h)包含SEQ ID NO:43(CCR8_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和包含SEQ ID NO:44(CCR8_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y13、Y17和Y15中的至少两个或全部已被硫酸化,或h) A first isolated sulfated polypeptide comprising SEQ ID NO: 43 (CCR8_HUMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 44 (CCR8_MACFA_TRD), preferably wherein at least two or all of Y13, Y17 and Y15 have been sulfated, or
i)包含SEQ ID NO:61(CCR9_HUMAN_TRD)的第一分离的硫酸化多肽,优选地Y17和/或Y37已被硫酸化,和包含SEQ ID NO:62(CCR9_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中至少Y28,且优选地Y17和/或Y37也已被硫酸化,或i) a first isolated sulfated polypeptide comprising SEQ ID NO: 61 (CCR9_HUMAN_TRD), preferably Y17 and/or Y37 having been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 62 (CCR9_MACFA_TRD), preferably wherein at least Y28, and preferably Y17 and/or Y37 having also been sulfated, or
j)包含SEQ ID NO:67(CCR10_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y14和Y22中的至少一个或两个已被硫酸化,和包含SEQ ID NO:68(CCR10_MACFA_TRD)的第二分离的硫酸化多肽,优选地Y14和Y12中的至少一个或两个已被硫酸化;或j) A first isolated sulfated polypeptide comprising SEQ ID NO: 67 (CCR10_HUMAN_TRD), preferably wherein at least one or both of Y14 and Y22 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 68 (CCR10_MACFA_TRD), preferably wherein at least one or both of Y14 and Y12 have been sulfated; or
k)包含SEQ ID NO:73(CXCR1_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y27已被硫酸化,和包含SEQ ID NO:74(CXCR1_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y14和Y28中的至少一个已被硫酸化,或k) A first isolated sulfated polypeptide comprising SEQ ID NO: 73 (CXCR1_HUMAN_TRD), preferably wherein Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 74 (CXCR1_MACFA_TRD), preferably wherein at least one of Y14 and Y28 has been sulfated, or
1)包含SEQ ID NO:79(CXCR2_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y23和/或Y25已被硫酸化,和包含SEQ ID NO:80(CXCR2_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y20和/或Y22已被硫酸化,或1) A first isolated sulfated polypeptide comprising SEQ ID NO: 79 (CXCR2_HUMAN_TRD), preferably wherein Y23 and/or Y25 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 80 (CXCR2_MACFA_TRD), preferably wherein Y20 and/or Y22 have been sulfated, or
m)包含SEQ ID NO:85(CXCR3_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y27和Y29中的至少一个或两个已被硫酸化,以及包含SEQ ID NO:86(CXCR3_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y2和Y29的至少一个或两个已被硫酸化,或m) a first isolated sulfated polypeptide comprising SEQ ID NO: 85 (CXCR3_HUMAN_TRD), preferably wherein at least one or both of Y27 and Y29 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 86 (CXCR3_MACFA_TRD), preferably wherein at least one or both of Y2 and Y29 have been sulfated, or
n)包含SEQ ID NO:91(CXCR4_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y12和/或Y21已被硫酸化,和包含SEQ ID NO:92(CXCR4_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中至少Y22和/或者Y21已被硫酸化,或n) A first isolated sulfated polypeptide comprising SEQ ID NO: 91 (CXCR4_HUMAN_TRD), preferably wherein at least Y12 and/or Y21 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 92 (CXCR4_MACFA_TRD), preferably wherein at least Y22 and/or Y21 has been sulfated, or
o)包含SEQ ID NO:97(CXCR5_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y3和Y27中的至少一个已被硫酸化,和包含SEQ ID NO:98(CXCR5_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y23和Y2中的至少一个已被硫酸化,或o) a first isolated sulfated polypeptide comprising SEQ ID NO: 97 (CXCR5_HUMAN_TRD), preferably wherein at least one of Y3 and Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 98 (CXCR5_MACFA_TRD), preferably wherein at least one of Y23 and Y2 has been sulfated, or
p)包含SEQ ID NO:103(CXCR6_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y6和Y10中的至少一个或两个已被硫酸化,和包含SEQ ID NO:104(CXCR6_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,p) A first isolated sulfated polypeptide comprising SEQ ID NO: 103 (CXCR6_HUMAN_TRD), preferably wherein at least one or both of Y6 and Y10 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 104 (CXCR6_MACFA_TRD), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated.
q)包含SEQ ID NO:157(CX3CR1_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y14已被硫酸化,和包含SEQ ID NO:158(CX3CR1_MACFA_TRD)的第二分离的硫酸化多肽,优选地其中至少Y20已被硫酸化,或q) A first isolated sulfated polypeptide comprising SEQ ID NO: 157 (CX3CR1_HUMAN_TRD), preferably wherein at least Y14 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 158 (CX3CR1_MACFA_TRD), preferably wherein at least Y20 has been sulfated, or
r)包含SEQ ID NO:163(CXCR1_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中至少Y27已被硫酸化,和包含SEQ ID NO:164(CXCR1_MACMU_TRD)的第二分离的硫酸化多肽,优选地其中至少Y14已被硫酸化。r) a first isolated sulfated polypeptide comprising SEQ ID NO: 163 (CXCR1_HUMAN_TRD), preferably wherein at least Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 164 (CXCR1_MACMU_TRD), preferably wherein at least Y14 has been sulfated.
根据第六方面的第五实施方式的一些实施方式B,抗体或片段特异性结合According to some embodiments B of the fifth embodiment of the sixth aspect, antibody or fragment specific binding
a)包含SEQ ID NO:4(CCR1_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y10和/或Y18已被硫酸化,和包含SEQ ID NO:5(CCR1_MACFA_N term)的第二分离的硫酸化多肽,优选地其中至少Y10和/或Y18已被硫酸化,a) A first isolated sulfated polypeptide comprising SEQ ID NO: 4 (CCR1_HUMAN_N term), preferably wherein at least Y10 and/or Y18 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 5 (CCR1_MACFA_N term), preferably wherein at least Y10 and/or Y18 has been sulfated.
b)包含SEQ ID NO:10(CCR2_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y26已被硫酸化,和包含SEQ ID NO:11(CCR2_MACMU_N term)的第二分离的硫酸化多肽,优选地其中至少Y26已被硫酸化,b) A first isolated sulfated polypeptide comprising SEQ ID NO: 10 (CCR2_HUMAN_N term), preferably wherein at least Y26 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 11 (CCR2_MACMU_N term), preferably wherein at least Y26 has been sulfated.
c)包含SEQ ID NO:16(CCR3_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y16和/或Y17已被硫酸化,和包含SEQ ID NO:17(CCR3_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y16已被硫酸化,c) A first isolated sulfated polypeptide comprising SEQ ID NO: 16 (CCR3_HUMAN_N term), preferably wherein Y16 and/or Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 17 (CCR3_MACFA_N term), preferably wherein Y16 has been sulfated.
d)包含SEQ ID NO:22(CCR4_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,和包含SEQ ID NO:23(CCR4_MACFA_N term)的第二分离的硫酸化多肽,优选地其中至少Y22已被硫酸化并且优选地此外Y16、Y19和/或Y20已被硫酸化,d) A first isolated sulfated polypeptide comprising SEQ ID NO: 22 (CCR4_HUMAN_N term), preferably wherein at least Y22 has been sulfated and preferably additionally Y16, Y19 and/or Y20 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 23 (CCR4_MACFA_N term), preferably wherein at least Y22 has been sulfated and preferably additionally Y16, Y19 and/or Y20 has been sulfated.
e)包含SEQ ID NO:28(CCR5_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,和包含SEQ ID NO:29(CCR5_MACMU_N term)的第二分离的硫酸化多肽,优选地其中Y3、Y10、Y14和Y15中的两个、三个或全部已被硫酸化,e) a first isolated sulfated polypeptide comprising SEQ ID NO: 28 (CCR5_HUMAN_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 29 (CCR5_MACMU_N term), preferably wherein two, three, or all of Y3, Y10, Y14, and Y15 have been sulfated.
f)包含SEQ ID NO:34(CCR6_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,和包含SEQ ID NO:35(CCR6_MACFA_Nterm)的第二分离的硫酸化多肽,优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,f) A first isolated sulfated polypeptide comprising SEQ ID NO: 34 (CCR6_HUMAN_N term), preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 35 (CCR6_MACFA_N term), preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated.
g)包含SEQ ID NO:40(CCR7_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y8和Y17中的一个或两者已被硫酸化,和包含SEQ ID NO:41(CCR7_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y8和Y17中的一个或两个已被硫酸化,g) A first isolated sulfated polypeptide comprising SEQ ID NO: 40 (CCR7_HUMAN_N term), preferably wherein one or both of Y8 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 41 (CCR7_MACFA_N term), preferably wherein one or both of Y8 and Y17 have been sulfated.
h)包含SEQ ID NO:46(CCR8_HUMAN_N term,C=X或S)的第一分离的硫酸化多肽,优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和包含SEQ ID NO:47(CCR8_MACFA_N term,C=X或S)的第二分离的硫酸化多肽,优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,h) A first isolated sulfated polypeptide comprising SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 47 (CCR8_MACFA_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
i)包含SEQ ID NO:64(CCR9_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y28,并且还优选Y17和/或Y37已被硫酸化,和包含SEQ ID NO:65(CCR9_MACFA_Nterm)的第二分离的硫酸化多肽,优选地其中至少Y28,并且还优选Y17和/或Y37已被硫酸化,i) a first isolated sulfated polypeptide comprising SEQ ID NO: 64 (CCR9_HUMAN_N term), preferably wherein at least Y28, and even more preferably Y17 and/or Y37, has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 65 (CCR9_MACFA_N term), preferably wherein at least Y28, and even more preferably Y17 and/or Y37, has been sulfated.
j)包含SEQ ID NO:70(CCR10_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y14和Y22中的至少一个或两个已被硫酸化,和包含SEQ ID NO:71(CCR10_MACFA_N term)的第二个分离的硫酸化多肽,优选地Y14和Y22中的至少一个或两个已被硫酸化,j) A first isolated sulfated polypeptide comprising SEQ ID NO: 70 (CCR10_HUMAN_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 71 (CCR10_MACFA_N term), preferably wherein at least one or both of Y14 and Y22 have been sulfated.
k)包含SEQ ID NO:76(CXCR1_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y27已被硫酸化,和包含SEQ ID NO:77(CXCR1_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y14和Y28已被硫酸化,k) A first isolated sulfated polypeptide comprising SEQ ID NO: 76 (CXCR1_HUMAN_N term), preferably wherein Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 77 (CXCR1_MACFA_N term), preferably wherein Y14 and Y28 have been sulfated.
1)包含SEQ ID NO:82(CXCR2_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y23和/或Y25已被硫酸化,以及包含SEQ ID NO:83(CXCR2_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y20和/或Y22已被硫酸化,1) A first isolated sulfated polypeptide comprising SEQ ID NO: 82 (CXCR2_HUMAN_N term), preferably wherein Y23 and/or Y25 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 83 (CXCR2_MACFA_N term), preferably wherein Y20 and/or Y22 have been sulfated.
m)包含SEQ ID NO:88(CXCR3_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y27和Y29中的至少一个或两个已被硫酸化,和包含SEQ ID NO:89(CXCR3_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y27和Y29中的至少一个或两个已被硫酸化,m) a first isolated sulfated polypeptide comprising SEQ ID NO: 88 (CXCR3_HUMAN_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 89 (CXCR3_MACFA_N term), preferably wherein at least one or both of Y27 and Y29 have been sulfated.
n)包含SEQ ID NO:94(CXCR4_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y12和/或Y21已被硫酸化,和包含SEQ ID NO:95(CXCR4_MACFA_N term)的第二分离的硫酸化多肽,优选地其中至少Y12和/或Y21已被硫酸化,n) a first isolated sulfated polypeptide comprising SEQ ID NO: 94 (CXCR4_HUMAN_N term), preferably wherein at least Y12 and/or Y21 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 95 (CXCR4_MACFA_N term), preferably wherein at least Y12 and/or Y21 has been sulfated.
o)包含SEQ ID NO:100(CXCR5_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y3和Y27中的至少一个已被硫酸化,和包含SEQ ID NO:101(CXCR5_MACFA_N term)的第二分离的硫酸化多肽,优选地其中Y3和Y27中的至少一个已被硫酸化,或o) a first isolated sulfated polypeptide comprising SEQ ID NO: 100 (CXCR5_HUMAN_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 101 (CXCR5_MACFA_N term), preferably wherein at least one of Y3 and Y27 has been sulfated, or
p)包含SEQ ID NO:106(CXCR6_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中Y6和Y10中的至少一个或两个已被硫酸化,和包含SEQ ID NO:107(CXCR6_MACFA_Nterm)的第二分离的硫酸化多肽,优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或p) A first isolated sulfated polypeptide comprising SEQ ID NO: 106 (CXCR6_HUMAN_N term), preferably wherein at least one or both of Y6 and Y10 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 107 (CXCR6_MACFA_N term), preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
q)包含SEQ ID NO:160(CX3CR1_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y14已被硫酸化,和包含SEQ ID NO:161(CX3CR1_MACFA_N term)的第二分离的硫酸化多肽,优选地其中至少Y20或Y22已被硫酸化,或q) A first isolated sulfated polypeptide comprising SEQ ID NO: 160 (CX3CR1_HUMAN_N term), preferably wherein at least Y14 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 161 (CX3CR1_MACFA_N term), preferably wherein at least Y20 or Y22 has been sulfated, or
r)包含SEQ ID NO:166(CXCR1_HUMAN_N term)的第一分离的硫酸化多肽,优选地其中至少Y27已被硫酸化,和包含SEQ ID NO:167(CXCR1_MACMU_N term)的第二分离的硫酸化多肽,优选地其中至少Y14或Y28已被硫酸化。r) a first isolated sulfated polypeptide comprising SEQ ID NO: 166 (CXCR1_HUMAN_N term), preferably wherein at least Y27 has been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 167 (CXCR1_MACMU_N term), preferably wherein at least Y14 or Y28 has been sulfated.
根据第六方面的第五实施方式的一些实施方式C1,所述抗体或片段特异性结合包含根据第六方面的第三实施方式的一些实施方式A的序列的第一分离的硫酸化多肽和结合根据第六方面的第三实施方式的一些实施方式B或C的序列的第二分离的硫酸化多肽,其中优选地,所述第一和第二多肽包含相同受体但来自不同物种的TRD。According to some embodiments C1 of the fifth embodiment of the sixth aspect, the antibody or fragment specifically binds to a first isolated sulfated polypeptide comprising a sequence of some embodiments A of the third embodiment of the sixth aspect and a second isolated sulfated polypeptide comprising a sequence of some embodiments B or C of the third embodiment of the sixth aspect, wherein preferably, the first and second polypeptides comprise the same receptor but TRDs from different species.
根据第六方面的第五实施方式的一些实施方式C2,所述抗体或片段特异性结合包含根据第六方面的第四实施方式的一些实施方式A的序列的第一分离的硫酸化多肽和结合根据第六方面的第四实施方式的一些实施方式B或C的序列的第二分离的硫酸化多肽,其中优选地,所述第一和第二多肽包含相同受体但来自不同物种的TRD。According to some embodiments C2 of the fifth embodiment of the sixth aspect, the antibody or fragment specifically binds to a first isolated sulfated polypeptide comprising a sequence of some embodiments A of the fourth embodiment of the sixth aspect and a second isolated sulfated polypeptide comprising a sequence of some embodiments B or C of the fourth embodiment of the sixth aspect, wherein preferably, the first and second polypeptides comprise the same receptor but TRDs from different species.
根据第六方面的一些第六实施方式,其可以与第六方面的第一、第二、第三、第四和/或第五实施方式相同或不同,用于结合第一分离的硫酸化多肽和/或用于结合所述七次跨膜受体的抗体或抗原结合片段的解离常数或EC50低于200nM、150nM、100nM,10nM、5nM、2.5nM、1nM、0.5nM或0.25nM。According to some sixth embodiments of the sixth aspect, which may be the same as or different from the first, second, third, fourth and/or fifth embodiments of the sixth aspect, the dissociation constant or EC50 for binding the first isolated sulfated polypeptide and/or for binding the antibody or antigen-binding fragment of the seven-transmembrane receptor is less than 200 nM, 150 nM, 100 nM, 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM.
根据第六方面的第六实施方式的一些实施方式A,用于结合第一分离的硫酸化多肽和/或用于结合所述七次跨膜受体的抗体或抗原结合片段的解离常数或EC50低于200nM,199nM,198nM,197nM,196nM,195nM,194nM,193nM,192nM,191nM,190nM,189nM,188nM,187nM,186nM,185nM,184nM,183nM,182nM,181nM,180nM,179nM,178nM,177nM,176nM,175nM,174nM,173nM,172nM,171nM,170nM,169nM,168nM,167nM,166nM,165nM,164nM,163nM,162nM,161nM,160nM,159nM,158nM,157nM,156nM,155nM,154nM,153nM,152nM,151nM,150nM,149nM,148nM,147nM,146nM,145nM,144nM,143nM,142nM,141nM,140nM,139nM,138nM,137nM,136nM,135nM,134nM,133nM,132nM,131nM,130nM,129nM,128nM,127nM,126nM,125nM,124nM,123nM,122nM,121nM,120nM,119nM,118nM,117nM,116nM,115nM,114nM,113nM,112nM,111nM,110nM,109nM,108nM,107nM,106nM,105nM,104nM,103nM,102nM,101nM,100nM,99nM,98nM,97nM,96nM,95nM,94nM,93nM,92nM,91nM,90nM,89nM,88nM,87nM,86nM,85nM,84nM,83nM,82nM,81nM,80nM,79nM,78nM,77nM,76nM,75nM,74nM,73nM,72nM,71nM,70nM,69nM,68nM,67nM,66nM,65nM,64nM,63nM,62nM,61nM,60nM,59nM,58nM,57nM,56nM,55nM,54nM,53nM,52nM,51nM,50nM,49nM,48nM,47nM,46nM,45nM,44nM,43nM,42nM,41nM,40nM,39nM,38nM,37nM,36nM,35nM,34nM,33nM,32nM,31nM,30nM,29nM,28nM,27nM,26nM,25nM,24nM,23nM,22nM,21nM,20nM,19nM,18nM,17nM,16nM,15nM,14nM,13nM,12nM,11nM,10nM,9nM,8nM,7nM,6nM,5nM,4nM,3nM,2nM,1nM,0.9nM,0.8nM,0.7nM,0.6nM,0.5nM,0.4nM,0.3nM,0.25nM,0.2nM,0.15nM,或0.1nM。According to some embodiments A of the sixth embodiment of the sixth aspect, the dissociation constant or EC50 of the antibody or antigen-binding fragment used to bind the first isolated sulfated polypeptide and/or the antibody or antigen-binding fragment used to bind the seven-transmembrane receptor is less than 200 nM, 199 nM, 198 nM, 197 nM, 196 nM, 195 nM, 194 nM, 193 nM, 192 nM, 191 nM, 190 nM, 189 nM, 188 nM, 187 nM, etc. nM, 186nM, 185nM, 184nM, 183nM, 182nM, 181nM, 180nM, 179nM, 178nM, 177nM, 176nM, 175nM, 17 4nM, 173nM, 172nM, 171nM, 170nM, 169nM, 168nM, 167nM, 166nM, 165nM, 164nM, 163nM, 162nM, 1 61nM, 160nM, 159nM, 158nM, 157nM, 156nM, 155nM, 154nM, 153nM, 152nM, 151nM, 150nM, 149nM, 148nM, 147nM, 146nM, 145nM, 144nM, 143nM, 142nM, 141nM, 140nM, 139nM, 138nM, 137nM, 136nM , 135nM, 134nM, 133nM, 132nM, 131nM, 130nM, 129nM, 128nM, 127nM, 126nM, 125nM, 124nM, 123n M, 122nM, 121nM, 120nM, 119nM, 118nM, 117nM, 116nM, 115nM, 114nM, 113nM, 112nM, 111nM, 110n M, 109nM, 108nM, 107nM, 106nM, 105nM, 104nM, 103nM, 102nM, 101nM, 100nM, 99nM, 98nM, 97nM, 96nM, 95nM, 94nM, 93nM, 92nM, 91nM, 90nM, 89nM, 88nM, 87nM, 86nM, 85nM, 84nM, 83nM, 82nM, 81 nM, 80nM, 79nM, 78nM, 77nM, 76nM, 75nM, 74nM, 73nM, 72nM, 71nM, 70nM, 69nM, 68nM, 67nM, 66nM , 65nM, 64nM, 63nM, 62nM, 61nM, 60nM, 59nM, 58nM, 57nM, 56nM, 55nM, 54nM, 53nM, 52nM, 51nM, 5 0nM, 49nM, 48nM, 47nM, 46nM, 45nM, 44nM, 43nM, 42nM, 41nM, 40nM, 39nM, 38nM, 37nM, 36nM, 35n M, 34nM, 33nM, 32nM, 31nM, 30nM, 29nM, 28nM, 27nM, 26nM, 25nM, 24nM, 23nM, 22nM, 21nM, 20nM, 19nM, 18nM, 17nM, 16nM, 15nM, 14nM, 13nM, 12nM, 11nM, 10nM, 9nM, 8nM, 7nM, 6nM, 5nM, 4nM, 3nM, 2nM, 1nM, 0.9nM, 0.8nM, 0.7nM, 0.6nM, 0.5nM, 0.4nM, 0.3nM, 0.25nM, 0.2nM, 0.15nM, or 0.1nM.
优选地,用于结合第一分离的硫酸化多肽和/或所述七次跨膜受体的抗体或抗原结合片段的解离常数或EC50低于10nM、5nM、2.5nM、1nM、0.5nM、0.25nM、0.2nM、0.15nM或0.1nM。Preferably, the dissociation constant or EC50 of the antibody or antigen-binding fragment used to bind the first isolated sulfated polypeptide and/or the seven-transmembrane receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM, 0.25 nM, 0.2 nM, 0.15 nM or 0.1 nM.
优选地,EC50可以在过表达靶标的CHO细胞中测定。如例如实施例10.1.1中所公开的,用本文所公开的方法获得的抗体对其各自的靶标具有优异的亲和力。例如,TPP-21181、TPP-17578、TPP-19546、TPP-18206、TPP-21360和TPP-23411在工程化以表达CCR8的CHO细胞中以4.8nM、1.7nM、0.8nM、0.6nM、~0.9nM或1.7nM的EC50结合人CCR8。此外,TPP-21281、TPP-17578、TPP-19546、TPP-18206、TPP-21360和TPP-23411以1.8nM、1nM、0.5nM、0.7nM、~0.55nM或0.9nM的EC50结合食蟹猴CCR8。此外,TPP-17578、TPP-19546、TPP-18206和TPP-21360以25nM、15nM、23nM或10nM的EC50与人调节性T细胞结合。此外,抗鼠CCR8抗体TPP-14099以3nM的EC50结合表达鼠CCR8的CHO细胞,和以13.2nM的EC50结合鼠iTregs,参见表10.1.1.5。Preferably, EC50 can be measured in CHO cells overexpressing the target. As disclosed, for example, in Example 10.1.1, antibodies obtained using the methods disclosed herein have excellent affinity for their respective targets. For example, TPP-21181, TPP-17578, TPP-19546, TPP-18206, TPP-21360, and TPP-23411 bind to human CCR8 in CHO cells engineered to express CCR8 at EC50 levels of 4.8 nM, 1.7 nM, 0.8 nM, 0.6 nM, ~0.9 nM, or 1.7 nM. In addition, TPP-21281, TPP-17578, TPP-19546, TPP-18206, TPP-21360, and TPP-23411 bound to cynomolgus monkey CCR8 at EC50 values of 1.8 nM, 1 nM, 0.5 nM, 0.7 nM, ~0.55 nM, or 0.9 nM. Furthermore, TPP-17578, TPP-19546, TPP-18206, and TPP-21360 bound to human regulatory T cells at EC50 values of 25 nM, 15 nM, 23 nM, or 10 nM. Additionally, the anti-mouse CCR8 antibody TPP-14099 bound to CHO cells expressing mouse CCR8 at an EC50 value of 3 nM and to mouse iTregs at an EC50 value of 13.2 nM (see Table 10.1.1.5).
根据第六方面的第六实施方式的一些实施方式B,其可以与第六方面第六实施方式的实施方式A相同或不同,用于结合第二分离的硫酸化多肽和/或用于结合第二七次跨膜受体的抗体或抗原结合片段的解离常数或EC50低于200nM,199nM,198nM,197nM,196nM,195nM,194nM,193nM,192nM,191nM,190nM,189nM,188nM,187nM,186nM,185nM,184nM,183nM,182nM,181nM,180nM,179nM,178nM,177nM,176nM,175nM,174nM,173nM,172nM,171nM,170nM,169nM,168nM,167nM,166nM,165nM,164nM,163nM,162nM,161nM,160nM,159nM,158nM,157nM,156nM,155nM,154nM,153nM,152nM,151nM,150nM,149nM,148nM,147nM,146nM,145nM,144nM,143nM,142nM,141nM,140nM,139nM,138nM,137nM,136nM,135nM,134nM,133nM,132nM,131nM,130nM,129nM,128nM,127nM,126nM,125nM,124nM,123nM,122nM,121nM,120nM,119nM,118nM,117nM,116nM,115nM,114nM,113nM,112nM,111nM,110nM,109nM,108nM,107nM,106nM,105nM,104nM,103nM,102nM,101nM,100nM,99nM,98nM,97nM,96nM,95nM,94nM,93nM,92nM,91nM,90nM,89nM,88nM,87nM,86nM,85nM,84nM,83nM,82nM,81nM,80nM,79nM,78nM,77nM,76nM,75nM,74nM,73nM,72nM,71nM,70nM,69nM,68nM,67nM,66nM,65nM,64nM,63nM,62nM,61nM,60nM,59nM,58nM,57nM,56nM,55nM,54nM,53nM,52nM,51nM,50nM,49nM,48nM,47nM,46nM,45nM,44nM,43nM,42nM,41nM,40nM,39nM,38nM,37nM,36nM,35nM,34nM,33nM,32nM,31nM,30nM,29nM,28nM,27nM,26nM,25nM,24nM,23nM,22nM,21nM,20nM,19nM,18nM,17nM,16nM,15nM,14nM,13nM,12nM,11nM,10nM,9nM,8nM,7nM,6nM,5nM,4nM,3nM,2nM,1nM,0.9nM,0.8nM,0.7nM,0.6nM,0.5nM,0.4nM,0.3nM,0.25nM,0.2nM,0.15nM,或0.1nM。According to some embodiments B of the sixth embodiment of the sixth aspect, which may be the same as or different from embodiment A of the sixth embodiment of the sixth aspect, the dissociation constant or EC50 of the antibody or antigen-binding fragment used to bind the second isolated sulfated polypeptide and/or the antibody or antigen-binding fragment used to bind the second seventh transmembrane receptor is less than 200 nM, 199 nM, 198 nM, 197 nM, 196 nM, 195 nM, 194 nM, 193 nM, 192 nM, 191 nM, etc. M, 190nM, 189nM, 188nM, 187nM, 186nM, 185nM, 184nM, 183nM, 182nM, 181nM, 180nM, 179nM, 178nM , 177nM, 176nM, 175nM, 174nM, 173nM, 172nM, 171nM, 170nM, 169nM, 168nM, 167nM, 166nM, 165nM, 164nM, 163nM, 162nM, 161nM, 160nM, 159nM, 158nM, 157nM, 156nM, 155nM, 154nM, 153nM, 152nM, 151nM, 150nM, 149nM, 148nM, 147nM, 146nM, 145nM, 144nM, 143nM, 142nM, 141nM, 140nM, 139nM, 1 38nM, 137nM, 136nM, 135nM, 134nM, 133nM, 132nM, 131nM, 130nM, 129nM, 128nM, 127nM, 126nM, 12 5nM, 124nM, 123nM, 122nM, 121nM, 120nM, 119nM, 118nM, 117nM, 116nM, 115nM, 114nM, 113nM, 112 nM, 111nM, 110nM, 109nM, 108nM, 107nM, 106nM, 105nM, 104nM, 103nM, 102nM, 101nM, 100nM, 99n M, 98nM, 97nM, 96nM, 95nM, 94nM, 93nM, 92nM, 91nM, 90nM, 89nM, 88nM, 87nM, 86nM, 85nM, 84nM, 83 nM, 82nM, 81nM, 80nM, 79nM, 78nM, 77nM, 76nM, 75nM, 74nM, 73nM, 72nM, 71nM, 70nM, 69nM, 68nM, 6 7nM, 66nM, 65nM, 64nM, 63nM, 62nM, 61nM, 60nM, 59nM, 58nM, 57nM, 56nM, 55nM, 54nM, 53nM, 52nM, 51nM, 50nM, 49nM, 48nM, 47nM, 46nM, 45nM, 44nM, 43nM, 42nM, 41nM, 40nM, 39nM, 38nM, 37nM, 36n M, 35nM, 34nM, 33nM, 32nM, 31nM, 30nM, 29nM, 28nM, 27nM, 26nM, 25nM, 24nM, 23nM, 22nM, 21nM, 20 nM, 19nM, 18nM, 17nM, 16nM, 15nM, 14nM, 13nM, 12nM, 11nM, 10nM, 9nM, 8nM, 7nM, 6nM, 5nM, 4nM, 3n M, 2nM, 1nM, 0.9nM, 0.8nM, 0.7nM, 0.6nM, 0.5nM, 0.4nM, 0.3nM, 0.25nM, 0.2nM, 0.15nM, or 0.1nM.
优选地,用于结合第二分离的硫酸化多肽和/或用于结合第二七次跨膜受体的抗体或抗原结合片段的解离常数(KD)或EC50低于10nM、5nM、2.5nM、1nM、0.5或0.25nM。Preferably, the dissociation constant (KD) or EC50 of the sulfated polypeptide used to bind the second isolated peptide and/or the antibody or antigen-binding fragment used to bind the second seventh transmembrane receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 or 0.25 nM.
根据第六方面的第六实施方式的一些实施方式AB,用于结合第一分离的硫酸化多肽和/或第一七次跨膜受体的抗体或抗原结合片段的解离常数(KD)或EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,并且用于结合第二分离的硫酸化多肽和/或第二七次跨膜受体的抗体或抗原结合片段的解离常数(KD)或EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM。According to some embodiments AB of the sixth embodiment of the sixth aspect, the dissociation constant (KD) or EC50 of the antibody or antigen-binding fragment used to bind the first isolated sulfated polypeptide and/or the first seven-transmembrane receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM, and the dissociation constant (KD) or EC50 of the antibody or antigen-binding fragment used to bind the second isolated sulfated polypeptide and/or the second seven-transmembrane receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM.
根据第六方面的一些第七实施方式,其可以与根据第六方面的第一、第二、第三、第四、第五和/或第六实施方式相同或不同,用于结合第一分离的硫酸化多肽的抗体的解离常数(KD)低于用于结合与第一分离的硫酸化多肽具有相同序列的第一分离的非硫酸化多肽的抗体的解离常量(KD)。优选地,所述抗体基本上不结合与第一分离的硫酸化多肽具有相同序列的第一分离的非硫酸化多肽。According to some seventh embodiments of the sixth aspect, which may be the same as or different from the first, second, third, fourth, fifth and/or sixth embodiments of the sixth aspect, the dissociation constant (KD) of the antibody for binding the first isolated sulfated polypeptide is lower than the dissociation constant (KD) of the antibody for binding the first isolated non-sulfated polypeptide having the same sequence as the first isolated sulfated polypeptide. Preferably, the antibody substantially does not bind the first isolated non-sulfated polypeptide having the same sequence as the first isolated sulfated polypeptide.
根据第六方面的第七实施方式的一些实施方式A,用于结合第一分离的非硫酸化多肽的抗体的解离常数或EC50高于100nM,150nM,200nM,250nM,300nM,350nM,400nM,450nM,500nM,600nM,700nM,800nM,900nM,1μM,1.25μM,1.5μM,1.75μM,2μM,2.25μM,2.5μM,2.75μM,或3μM,或不可检测。优选地,用于结合第一分离的非硫酸化多肽的抗体的解离常数或EC50高于100nM、250nM、500nM、1μM、2μM或3μM,或不可检测。According to some embodiments A of the seventh embodiment of the sixth aspect, the dissociation constant or EC50 of the antibody used to bind the first isolated non-sulfated polypeptide is higher than 100 nM, 150 nM, 200 nM, 250 nM, 300 nM, 350 nM, 400 nM, 450 nM, 500 nM, 600 nM, 700 nM, 800 nM, 900 nM, 1 μM, 1.25 μM, 1.5 μM, 1.75 μM, 2 μM, 2.25 μM, 2.5 μM, 2.75 μM, or 3 μM, or is undetectable. Preferably, the dissociation constant or EC50 of the antibody used to bind the first isolated non-sulfated polypeptide is higher than 100 nM, 250 nM, 500 nM, 1 μM, 2 μM, or 3 μM, or is undetectable.
根据第六方面第七实施方式的一些实施方式B,其可以与第六方面的第七实施方式的实施方式A相同,用于结合第一分离的硫酸化多肽的抗体或片段的解离常数或EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,并且用于结合第一分离的非硫酸化多肽的抗体或片段的解离常数或EC50高于10nM、25nM、50nM、100nM、250nM或500nM,或不可检测。According to some embodiments B of the seventh embodiment of the sixth aspect, which may be the same as embodiment A of the seventh embodiment of the sixth aspect, the dissociation constant or EC50 of the antibody or fragment used to bind the first isolated sulfated polypeptide is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM, and the dissociation constant or EC50 of the antibody or fragment used to bind the first isolated non-sulfated polypeptide is greater than 10 nM, 25 nM, 50 nM, 100 nM, 250 nM or 500 nM, or is undetectable.
根据第6方面的抗体可包含源自人、猴、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼的CDR。优选地,根据第6方面的抗体包含人、大鼠或小鼠衍生的CDR。The antibody according to aspect 6 may comprise a CDR derived from humans, monkeys, macaques (cynomolgus monkeys), rhesus monkeys, rodents, mice, rats, horses, cattle, pigs, dogs, cats, and camels. Preferably, the antibody according to aspect 6 comprises a CDR derived from humans, rats, or mice.
根据第6方面的一些第8实施方式,其可以并且建议与第六方面的第一、第二、第三、第四、第五、第六和/或第七实施方式组合,分离的抗体或抗原结合片段包含人源CDR。根据一些高度优选的实施方式,人源CDR与最近的人类生殖系的偏差不超过或小于1、2、3、4、5、6、7、8、9、10、11、12、13、14或15。最接近的人类生殖系可以如本领域已知的那样确定,例如使用IgBLAST(Ye,Jian,et al.″IgBLAST:an immunoglobulin variable domainsequence analysis tool.″Nucleic acids research 41.W1(2013):W34-W40.)用从IMGT人类生殖系数据库检索的数据。根据这些第8实施方式的抗体可如例如实施例6或8中所述或如本文别处所述获得。According to some eighth embodiments of the sixth aspect, which may and are suggested to be combined with the first, second, third, fourth, fifth, sixth and/or seventh embodiments of the sixth aspect, the isolated antibody or antigen-binding fragment comprises a human CDR. According to some highly preferred embodiments, the deviation of the human CDR from the nearest human germline is no more than or less than 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15. The nearest human germline can be determined as is known in the art, for example using IgBLAST (Ye, Jian, et al. "IgBLAST: an immunoglobulin variable domain sequence analysis tool." Nucleic acids research 41. W1 (2013): W34-W40.) with data retrieved from the IMGT human germline database. The antibodies according to these eighth embodiments can be obtained as described, for example, in Examples 6 or 8 or elsewhere herein.
根据第6方面的一些第9实施方式,其可以并且建议与第6方面第一、第二、第三、第四、第五、第六、第七或第八实施方式组合,分离的抗体或抗原结合片段对人和食蟹猴是交叉反应的,参见实施例10.1.1。优选地,用于结合人趋化因子受体的抗体或抗原结合片段的解离常数(KD)或EC50低于200nM、150nM、100nM、10nM、5nM、2.5nM、1nM、0.5或0.25nM,例如低于10nM,5nM,2.5nM,1nM,0.5或0.25nm。优选地,用于结合食蟹猴趋化因子受体的抗体或抗原结合片段的解离常数(KD)或EC50低于10nM、5nM、2.5nM、1nM、0.5或0.25nM。According to some ninth embodiments of aspect 6, which can and are suggested to be combined with the first, second, third, fourth, fifth, sixth, seventh, or eighth embodiments of aspect 6, the isolated antibody or antigen-binding fragment is cross-reactive to humans and cynomolgus monkeys, see Example 10.1.1. Preferably, the dissociation constant (KD) or EC50 of the antibody or antigen-binding fragment used to bind to the human chemokine receptor is less than 200 nM, 150 nM, 100 nM, 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM, for example less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. Preferably, the dissociation constant (KD) or EC50 of the antibody or antigen-binding fragment used to bind to the cynomolgus monkey chemokine receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM.
根据第6方面的一些第10实施方式,其可以并且建议与第6方面第一、第二、第三、第四、第五、第六、第七、第八和/或第九实施方式组合,分离的抗体或抗原结合片段的特征在于HCDR3区的组成偏离平均HCDR3区。优选地,分离的抗体或抗原结合片段的特征在于HCDR3区,其包含10至34%的酪氨酸和/或至少一种组氨酸,优选地2至20%的组氨酸,最优选地7至20%的组氨酸。According to some tenth embodiments of aspect 6, which may and are suggested to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth and/or ninth embodiments of aspect 6, the isolated antibody or antigen-binding fragment is characterized in that the composition of the HCDR3 region deviates from the average HCDR3 region. Preferably, the isolated antibody or antigen-binding fragment is characterized in that the HCDR3 region contains 10 to 34% tyrosine and/or at least one histidine, preferably 2 to 20% histidine, and most preferably 7 to 20% histidine.
在第6方面的第10实施方式的一些实施方式A中,分离的抗体或抗原结合片段包含HCDR3,其含有In some embodiments A of the tenth embodiment of aspect 6, the isolated antibody or antigen-binding fragment comprises HCDR3, which contains
a)>0和<35%、>8和<34%,≥10和≤34%,或>15和<11%酪氨酸(Y)残基,和/或a) >0 and <35%, >8 and <34%, ≥10 and ≤34%, or >15 and <11% tyrosine (Y) residues, and/or
b)>0和≤16%,≥2和≤20%或≥7和≤20%组氨酸(H)残基,以及b) >0 and ≤16%, ≥2 and ≤20% or ≥7 and ≤20% histidine (H) residues, and
c)优选地大于0≤18%,≥7和≤10%或≥0和≤7%精氨酸(R)残基,和/或c) Preferably greater than 0 ≤ 18%, ≥ 7 and ≤ 10% or ≥ 0 and ≤ 7% arginine (R) residues, and/or
d)优选地大于0≤25%,≥7和≤16%或≥7和≤13%天冬氨酸(D)残基,和/或d) Preferably greater than 0 ≤ 25%, ≥ 7 and ≤ 16% or ≥ 7 and ≤ 13% aspartic acid (D) residues, and/or
e)优选地不含赖氨酸(K)残基和/或e) Preferably free of lysine (K) residues and/or
f)优选地不含谷氨酸(E)残基。f) Preferably, it does not contain glutamic acid (E) residues.
在第6方面的第10实施方式的一些实施方式B中,其可以与实施方式A相同或不同,分离的抗体或抗原结合片段包含HCDR3,其含有In some embodiments B of the tenth embodiment of aspect 6, which may be the same as or different from embodiment A, the isolated antibody or antigen-binding fragment contains HCDR3, which contains
a)>0和<47%,>22和<50%,>10和<34%,或>15和<47%带电氨基酸,和/或a) >0 and <47%, >22 and <50%, >10 and <34%, or >15 and <47% charged amino acids, and/or
b)>0且<32%,>8且<30%,或>10且<37%的带正电氨基酸,和/或b) Positively charged amino acids >0 and <32%, >8 and <30%, or >10 and <37%, and/or
c)>0和<26%,≥7和<16%、或>7和<14%带负电荷的氨基酸。c) >0 and <26%, ≥7 and <16%, or >7 and <14% of negatively charged amino acids.
在第6方面的第10实施方式的一些实施方式C中,其可以与实施方式A和/或B相同或不同,分离的抗体或抗原结合片段包含HCDR3,其总共含有>0和≤42%,≥10和≤42%或≥36和≤43%的组氨酸和酪氨酸残基。In some embodiments C of the tenth embodiment of aspect 6, which may be the same as or different from embodiments A and/or B, the isolated antibody or antigen-binding fragment comprises HCDR3, which contains a total of >0 and ≤42%, ≥10 and ≤42%, or ≥36 and ≤43% histidine and tyrosine residues.
本文公开了根据方面10的CCR8的每个实施方式和描述,例如具有必要的改变的一般的趋化因子受体抗体。本发明人认为,硫酸化的TRD基序而不是特定的CCR8序列促进酪氨酸和/或组氨酸的频率增加。This document discloses each embodiment and description of CCR8 according to aspect 10, such as a general chemokine receptor antibody with necessary modifications. The inventors believe that the sulfated TRD motif, rather than a specific CCR8 sequence, promotes an increase in the frequency of tyrosine and/or histidine residues.
根据第6方面的一些第11实施方式,其可以并且建议与第6方面第一、第二、第三、第四、第五、第六、第七、第八、第九和/或第十实施方式组合,分离的抗体或抗原结合片段至少部分地调节CCR8信号传导。According to some eleventh embodiments of the sixth aspect, it can and is recommended to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth, ninth and/or tenth embodiments of the sixth aspect, wherein the isolated antibody or antigen-binding fragment at least partially modulates CCR8 signaling.
例如,根据本发明的抗体可以For example, the antibody according to the present invention can
a)阻断G蛋白非依赖性信号传导,和/或a) Blocking G protein-independent signal transduction, and/or
b)阻断G蛋白依赖性信号传导,和/或b) Blocking G protein-dependent signaling, and/or
c)阻断G蛋白依赖性和G蛋白非依赖性信号传导,和/或c) Blocking G protein-dependent and G protein-independent signal transduction, and/or
d)增加G蛋白非依赖性信号传导,和/或d) Increase G protein-independent signaling, and/or
e)增加G蛋白依赖性信号传导,和/或e) Increase G protein-dependent signaling, and/or
f)增加G蛋白依赖性和G蛋白非依赖性信号传导。f) Increase both G protein-dependent and G protein-independent signaling.
在特定情境下,调节指的是阻断配体诱导的G蛋白非依赖性信号传导和诱导G蛋白非依赖性信号传导。In a specific context, regulation refers to both blocking ligand-induced G protein-independent signal transduction and inducing G protein-independent signal transduction.
根据一些优选实施方式,抗体或片段不调节七次跨膜受体的G蛋白非依赖性信号传导。根据一些优选实施方式,抗体或片段不阻断配体诱导的靶蛋白的G蛋白非依赖性信号传导。根据一些优选实施方式,抗体或片段不诱导G蛋白非依赖性信号传导。According to some preferred embodiments, the antibody or fragment does not regulate G protein-independent signaling of the seven-transmembrane receptor. According to some preferred embodiments, the antibody or fragment does not block ligand-induced G protein-independent signaling of the target protein. According to some preferred embodiments, the antibody or fragment does not induce G protein-independent signaling.
根据一些优选实施方式,抗体或片段阻断G蛋白依赖性信号传导。G蛋白依赖性信号传导可通过趋化性测定或优选地通过钙通量测定进行分析,如本文别处所述。According to some preferred embodiments, antibodies or fragments block G protein-dependent signaling. G protein-dependent signaling can be analyzed by chemotaxis assays or, preferably, by calcium flux assays, as described elsewhere herein.
根据一些优选的实施方式,抗体或片段阻断趋化因子受体的G蛋白依赖性信号传导,但不阻断趋化因子受体的G蛋白质非依赖性信号传递,参见实施例10.4。趋化因子受体的G蛋白非依赖性信号传导是任何非G蛋白依赖性信号传导的信号传导活性。According to some preferred embodiments, antibodies or fragments block G protein-dependent signaling of chemokine receptors, but do not block G protein-independent signaling of chemokine receptors, see Example 10.4. G protein-independent signaling of chemokine receptors is any signaling activity that is not G protein-dependent.
根据第六方面的一些第十二实施方式,其可以并且建议与第六方面的第一、第二、第三、第四、第五、第六、第七、第八、第九、第十和第十一实施方式组合,分离的抗体或抗原结合片段是低内化或非内化的抗体或抗体结合片段。According to some twelfth embodiments of the sixth aspect, which may and are recommended to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth, ninth, tenth and eleventh embodiments of the sixth aspect, the isolated antibody or antigen-binding fragment is a low-internalized or non-internalized antibody or antibody-binding fragment.
由于过度表达可能影响内化行为,并且不太适合在治疗环境中模拟内化,因此优选使用具有靶趋化因子受体内源性表达的模型细胞系来确定内化,参见实施例10.5。例如,可以在一个时间范围内或针对特定时间点确定内化。优选地,可以在内源性表达靶标的细胞中在15分钟、30分钟、1小时、2小时、3小时、6小时、12小时、24小时或48小时后测定内化。Because overexpression can affect internalization behavior and is not well-suited for simulating internalization in a therapeutic setting, it is preferable to use model cell lines with endogenous expression of the target chemokine receptor to determine internalization, see Example 10.5. For example, internalization can be determined over a time span or at specific time points. Preferably, internalization can be measured in cells with endogenous target expression at 15 minutes, 30 minutes, 1 hour, 2 hours, 3 hours, 6 hours, 12 hours, 24 hours, or 48 hours.
根据第6方面的第12实施方式的一些实施方式A,抗体或抗原结合片段具有与同种型对照的内化速率相同数量级的内化速率。According to some embodiments A of the 12th embodiment of aspect 6, the antibody or antigen-binding fragment has an internalization rate of the same order of magnitude as that of the isotype control.
根据第6方面的第12实施方式的一些实施方式B,抗体或抗原结合片段的特征在于以低于同种型对照内化的1.5、2、3、4、5、6、7或10倍的内化进入具有内源性靶表达的细胞。抗体的同种型对照可以如本领域已知的那样选择,以尽可能接近地匹配抗体的同种型,但不与靶标结合。According to some embodiments B of the 12th embodiment of aspect 6, the antibody or antigen-binding fragment is characterized by internalization into cells with endogenous target expression at a rate of 1.5, 2, 3, 4, 5, 6, 7, or 10 times lower than that of the isotype control internalized. The isotype control of the antibody can be selected as is known in the art to match the antibody isotype as closely as possible, but without binding to the target.
根据第6方面的第12实施方式的一些实施方式C,抗体或抗原结合片段的特征在于以低于同种型对照内化的150%、175%、200%、300%、400%或500%的内化进入具有内源性靶表达的细胞,例如在15分钟、30分钟、1h、2h、3h、6h、12h、24h或48h后。According to some embodiments C of the 12th embodiment of aspect 6, the antibody or antigen-binding fragment is characterized by entering cells with endogenous target expression at an internalization rate of 150%, 175%, 200%, 300%, 400%, or 500% lower than that of the isotype control, for example, after 15 minutes, 30 minutes, 1 hour, 2 hours, 3 hours, 6 hours, 12 hours, 24 hours, or 48 hours.
根据第六方面的一些第十三实施方式,其可以并且建议与第六方面第一、第二、第三、第四、第五、第六、第七、第八、第九、第十、第十一和/或第十二实施方式组合,分离的抗体或抗原结合片段诱导表达抗体的靶受体的细胞的ADCC和/或ADCP。According to some thirteenth embodiments of the sixth aspect, it can and is suggested to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth, ninth, tenth, eleventh and/or twelfth embodiments of the sixth aspect, wherein isolated antibodies or antigen-binding fragments induce ADCC and/or ADCP in cells expressing antibody target receptors.
在第6方面的第13个实施方式的一些优选实施方式中,抗体或抗原结合片段是非糖基化的。In some preferred embodiments of the 13th embodiment of aspect 6, the antibody or antigen-binding fragment is non-glycosylated.
在第6方面的第13实施方式的一些实施方式A1中,抗体或抗原结合片段以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a)。优选地,KD可以使用表面等离子体共振来确定。In some embodiments A1 of the 13th embodiment of aspect 6, the antibody or antigen-binding fragment binds to the human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) of less than 530 nM, 500 nM, 450 nM, 400 nM, 300 nM, or 200 nM. Preferably, the KD can be determined using surface plasmon resonance.
在第6方面的第13实施方式的一些实施方式B1中,其可以与实施方式A1相同或不同,抗体或抗原结合片段在经由人效应细胞(例如人NK细胞)在表达靶受体的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC)。ADCC诱导可以用本领域已知的测定进行分析,例如根据实施例10.3.3ff或本文其他地方所述。优选地,用Treg细胞进行测定,其中至少80%或85%的Treg细胞表达CCR8。In some embodiments B1 of the 13th embodiment of aspect 6, which may be the same as or different from embodiment A1, an antibody or antigen-binding fragment induces antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing the target receptor via human effector cells (e.g., human NK cells). ADCC induction can be analyzed using assays known in the art, such as those described in Example 10.3.3ff or elsewhere herein. Preferably, the assay is performed using Treg cells, wherein at least 80% or 85% of the Treg cells express CCR8.
在第六方面的第十三实施方式的一些实施方式C1中,其可以与实施方式A1或B1相同或不同,表达靶受体的细胞的ADCC诱导的最大耗竭为至少30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%、98%或99%。In some embodiments C1 of the thirteenth embodiment of the sixth aspect, which may be the same as or different from embodiments A1 or B1, the maximum exhaustion induced by ADCC in cells expressing the target receptor is at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%.
在第六方面的第十三实施方式的一些实施方式D1中,其可以与实施方式A1、B1或C1相同或不同,靶标表达细胞的ADCC诱导的耗竭的EC50低于500pM、400pM、300pM、200pM、100 pM、50pM、25pM、20pM、12.5pM、10pM、5pM或2.5pM。In some embodiments D1 of the thirteenth embodiment of the sixth aspect, which may be the same as or different from embodiments A1, B1 or C1, the depleted EC50 induced by ADCC of the target expression cells is less than 500 pM, 400 pM, 300 pM, 200 pM, 100 pM, 50 pM, 25 pM, 20 pM, 12.5 pM, 10 pM, 5 pM or 2.5 pM.
在第6方面的第13实施方式的一些实施方式A2中,其可以与实施方式A1、B1、C1和/或D1相同或不同,抗体或抗原结合片段以低于30μM、20μM、10μM、5μM或1μM的解离常数(KD)与人FcγRIIA(CD32a)结合。In some embodiments A2 of the 13th embodiment of aspect 6, which may be the same as or different from embodiments A1, B1, C1 and/or D1, the antibody or antigen-binding fragment binds to human FcγRIIA (CD32a) with a dissociation constant (KD) of less than 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
在第六方面的第十三实施方式的一些实施方式B2中,其可以与实施方式A1、B1、C1和/或D1相同,并且可以与实施方式A2相同,抗体或抗原结合片段通过人效应细胞(例如人巨噬细胞)在表达靶受体的细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP)。例如,人巨噬细胞可以是M2或M1巨噬细胞。In some embodiments B2 of the thirteenth embodiment of the sixth aspect, which may be identical to embodiments A1, B1, C1 and/or D1, and may be identical to embodiment A2, the antibody or antigen-binding fragment induces antibody-dependent cell-mediated phagocytosis (ADCP) in cells expressing the target receptor via human effector cells (e.g., human macrophages). For example, the human macrophages may be M2 or M1 macrophages.
在第六方面的第十三实施方式的一些实施方式C2中,其可以与实施方式A1、B1、C1和/或D1相同,并且可以与实施方式A2和/或B2相同,ADCP诱导的表达靶受体的细胞的最大耗竭为至少5、10、15、20、25、30、40或50%。In some embodiments C2 of the thirteenth embodiment of the sixth aspect, which may be the same as embodiments A1, B1, C1 and/or D1, and may be the same as embodiments A2 and/or B2, the maximum depletion of ADCP-induced cells expressing the target receptor is at least 5, 10, 15, 20, 25, 30, 40 or 50%.
在第六方面的第十三实施方式的一些实施方式D2中,其可以与实施方式A1、B1、C1和/或D1相同,并且可以与实施方式A2、B2和/或C2相同,ADCP诱导的激活的人调节性T细胞的耗竭的EC50低于1500pM、1000pM、500pM、250pM、200pM、150pM、100pM、75pM、50pM、25pM或10pM。In some embodiments D2 of the thirteenth embodiment of the sixth aspect, which may be the same as embodiments A1, B1, C1 and/or D1, and may be the same as embodiments A2, B2 and/or C2, the depletion EC50 of ADCP-induced activated human regulatory T cells is less than 1500 pM, 1000 pM, 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM, 25 pM or 10 pM.
在第6方面的第13个实施方式中的一些优选实施方式中,提供了一种特异性结合趋化因子受体的分离的抗体或其抗原结合片段,其中所述抗体或抗原结合片段In some preferred embodiments of the 13th embodiment of aspect 6, an isolated antibody or antigen-binding fragment thereof that specifically binds to a chemokine receptor is provided, wherein said antibody or antigen-binding fragment
a)以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a),和/或a) Binding to human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) below 530 nM, 500 nM, 450 nM, 400 nM, 300 nM, or 200 nM, and/or
b)以低于30μM、20μM、10μM、5μM或1μM的解离常数(KD)与人FcγRIIA(CD32a)结合。b) Binds to human FcγRIIA (CD32a) with dissociation constants (KD) below 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
在第6方面的第13个实施方式中的一些优选实施方式中,提供了一种特异性结合趋化因子受体的分离的抗体或其抗原结合片段,其中所述抗体或抗原结合片段In some preferred embodiments of the 13th embodiment of aspect 6, an isolated antibody or antigen-binding fragment thereof that specifically binds to a chemokine receptor is provided, wherein said antibody or antigen-binding fragment
a)通过人效应细胞(例如人NK细胞)在表达人趋化因子受体的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和/或a) Inducing antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human chemokine receptors using human effector cells (e.g., human NK cells), and/or
b)通过人效应细胞(例如人巨噬细胞)在表达人趋化因子受体的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP)。b) Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human chemokine receptors via human effector cells (e.g., human macrophages).
在第6方面的第13个实施方式中的一些优选实施方式中,提供了一种特异性结合趋化因子受体的分离的抗体或其抗原结合片段,其中In some preferred embodiments of the 13th embodiment of aspect 6, an isolated antibody or antigen-binding fragment thereof that specifically binds to a chemokine receptor is provided, wherein
a)表达人趋化因子受体的靶细胞中ADCC诱导的最大耗竭为至少25%、30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%、98%或99%,和/或a) The maximum exhaustion induced by ADCC in target cells expressing human chemokine receptors is at least 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%, and/or
b)表达人趋化因子受体的靶细胞中ADCP诱导的最大耗竭为至少5%、10%、15%、20%、25%、30%、40%或50%,和/或b) The maximum ADCP-induced exhaustion in target cells expressing human chemokine receptors is at least 5%, 10%, 15%, 20%, 25%, 30%, 40%, or 50%, and/or
c)表达人趋化因子受体的靶细胞的最大耗竭为至少30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%或99%。c) The maximum depletion of target cells expressing human chemokine receptors is at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99%.
在第6方面的第13个实施方式中的一些优选实施方式中,提供了一种特异性结合趋化因子受体的分离的抗体或其抗原结合片段,其中In some preferred embodiments of the 13th embodiment of aspect 6, an isolated antibody or antigen-binding fragment thereof that specifically binds to a chemokine receptor is provided, wherein
a)ADCC诱导的表达人趋化因子受体的靶细胞耗竭的EC50低于200pM、100pM、50pM、25pM、12.5pM、10pM或5pM和/或a) ADCC-induced depletion of EC50 in target cells expressing human chemokine receptors below 200 pM, 100 pM, 50 pM, 25 pM, 12.5 pM, 10 pM, or 5 pM and/or
b)ADCP诱导的表达人趋化因子受体的靶细胞耗竭的EC50低于500pM、250pM、200pM、150pM、100pM、75pM、50pM或25pM。b) ADCP-induced depletion of EC50 in target cells expressing human chemokine receptors below 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM, or 25 pM.
根据第6方面的一些第14实施方式,其可以并且建议与第6方面第一、第二、第三、第四、第五、第六、第七、第八、第九、第十、第十一、第十二和/或第十三实施方式组合,分离的抗体或抗原结合片段包含人、大鼠或鼠IgG抗体,优选地人IgG1抗体或鼠IgG2a抗体,参见实施例6和8。According to some of the 14th embodiments of aspect 6, which can and are recommended to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth, ninth, tenth, eleventh, twelfth and/or thirteenth embodiments of aspect 6, the isolated antibody or antigen-binding fragment comprises human, rat or mouse IgG antibody, preferably human IgG1 antibody or mouse IgG2a antibody, see Examples 6 and 8.
根据第6方面的一些第15实施方式,其可以并且建议与第6方面第一、第二、第三、第四、第五、第六、第七、第八、第九、第十、第十一、第十二、第十三和/或第十四实施方式组合,分离的抗体或抗原结合片段是scFv、Fab、Fab′或F(ab′)2片段,参见实施例6。According to some of the 15th embodiments of aspect 6, which may and are suggested to be combined with the first, second, third, fourth, fifth, sixth, seventh, eighth, ninth, tenth, eleventh, twelfth, thirteenth and/or fourteenth embodiments of aspect 6, the isolated antibody or antigen-binding fragment is scFv, Fab, Fab′ or F(ab′)2 fragment, see Example 6.
根据当前方面的抗体可以是缀合的,例如本文别处所讨论的。根据当前方面的抗体可用于治疗以表达七次跨膜受体的细胞参与为特征的肿瘤或疾病,例如本文别处所述。根据当前方面的抗体可在体内或体外用作诊断剂,例如本文别处所述。此外,提供了一种试剂盒,其包含根据当前方面的抗体以及使用说明书。Antibodies according to the present invention may be conjugated, as discussed elsewhere herein. Antibodies according to the present invention may be used to treat tumors or diseases characterized by the expression of seven-transmembrane receptors, as described elsewhere herein. Antibodies according to the present invention may be used as diagnostic agents in vivo or in vitro, as described elsewhere herein. Furthermore, a kit is provided comprising an antibody according to the present invention and instructions for use.
根据第六方面的优选组合According to the preferred combination in the sixth aspect
以下实施方式公开了第六方面的优选组合,从而强调了本发明的模块性质。根据优选实施方式I,提供了一种分离的抗体或其抗原结合片段,其特异性结合第一分离的硫酸化多肽,该多肽包含七次跨膜受体的富含酪氨酸的结构域(TRD)和任选的其LID结构域,其中TRD的酪氨酸残基的至少25%、至少50%或至少75%被硫酸化。根据优选的实施方式II,提供了根据优选的实施方式I的分离的抗体或抗原结合片段,其中TRD和LID结构域之间的半胱氨酸已被移除或已被交换成不同的氨基酸。根据优选的实施方式III,提供根据优选实施方式I或II的分离的抗体或抗原结合片段,其中所述七次跨膜受体是人、食蟹猴或小鼠七次跨膜受体。根据优选实施方式IV,提供根据优选的实施方式I、II或III中任一项的分离的抗体或抗原结合片段,其中所述七次跨膜受体是a)CC趋化因子受体,优选地CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9或CCR10,b)CXC趋化因子受体,优选地CXCR1、CXCR2、CXCR3、CXCR4、CXCR5或CXCR6,或c)CX3CR1或CXCR1。根据优选的实施方式V,提供根据优选的实施方式I、II、III或IV中任一项的分离的抗体或抗原结合片段,所述第一分离的硫酸化多肽包含以下序列或由以下序列组成:The following embodiments disclose preferred combinations of the sixth aspect, thereby emphasizing the modular nature of the invention. According to preferred embodiment I, an isolated antibody or antigen-binding fragment thereof is provided that specifically binds to a first isolated sulfated polypeptide comprising a tyrosine-rich domain (TRD) of a seven-transmembrane receptor and optionally its LID domain, wherein at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated. According to preferred embodiment II, an isolated antibody or antigen-binding fragment according to preferred embodiment I is provided, wherein the cysteine residue between the TRD and LID domains has been removed or exchanged for a different amino acid. According to preferred embodiment III, an isolated antibody or antigen-binding fragment according to preferred embodiment I or II is provided, wherein the seven-transmembrane receptor is a human, cynomolgus monkey, or mouse seven-transmembrane receptor. According to preferred embodiment IV, an isolated antibody or antigen-binding fragment according to any one of preferred embodiments I, II, or III is provided, wherein the seven-transmembrane receptor is a) a C<sub>C</sub> chemokine receptor, preferably CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, or CCR10; b) a CX<sub>C</sub> chemokine receptor, preferably CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, or CXCR6; or c) CX<sub>3</sub>CR1 or CXCR1. According to preferred embodiment V, an isolated antibody or antigen-binding fragment according to any one of preferred embodiments I, II, III, or IV is provided, wherein the first isolated sulfated polypeptide comprises or is composed of the following sequences:
a.SEQ ID NO:1、SEQ ID NO:4、SEQ ID NO:2、SEQ ID NO:5,、SEQ ID NO:3或SEQID NO:6,优选地其中至少Y10和/或Y18已被硫酸化,或a. SEQ ID NO: 1, SEQ ID NO: 4, SEQ ID NO: 2, SEQ ID NO: 5, SEQ ID NO: 3 or SEQ ID NO: 6, preferably wherein at least Y10 and/or Y18 has been sulfated, or
b.SEQ ID NO:7、SEQ ID NO:10、SEQ ID NO:8或SEQ ID NO:11,优选地其中至少Y26已被硫酸化,或b. SEQ ID NO: 7, SEQ ID NO: 10, SEQ ID NO: 8 or SEQ ID NO: 11, preferably wherein at least Y26 has been sulfated, or
c.SEQ ID NO:9或SEQ ID NO:12,优选地其中至少Y37和/或Y39已被硫酸化,或c. SEQ ID NO: 9 or SEQ ID NO: 12, preferably wherein at least Y37 and/or Y39 has been sulfated, or
d.SEQ ID NO:13或SEQ ID NO:16,优选地其中Y16和/或Y17已被硫酸化,或d. SEQ ID NO: 13 or SEQ ID NO: 16, preferably wherein Y16 and/or Y17 have been sulfated, or
e.SEQ ID NO:14或SEQ ID NO:17,优选地其中Y16已被硫酸化,或e. SEQ ID NO: 14 or SEQ ID NO: 17, preferably wherein Y16 has been sulfated, or
f.SEQ ID NO:15或SEQ ID NO:18,优选地其中Y20和/或Y22已被硫酸化,或f. SEQ ID NO: 15 or SEQ ID NO: 18, preferably wherein Y20 and/or Y22 have been sulfated, or
g.SEQ ID NO:19、SEQ ID NO:22、SEQ ID NO:20、SEQ ID NO:23、SEQ ID NO:21或SEQ ID NO:24,优选地其中至少Y22已被硫酸化,且优选地此外Y16、Y19和/或Y20已被硫酸化;或g. SEQ ID NO: 19, SEQ ID NO: 22, SEQ ID NO: 20, SEQ ID NO: 23, SEQ ID NO: 21 or SEQ ID NO: 24, preferably wherein at least Y22 has been sulfated, and preferably in addition, Y16, Y19 and/or Y20 have been sulfated; or
h.SEQ ID NO:25、SEQ ID NO:28、SEQ ID NO:26或SEQ ID NO:29,优选地其中Y3、Y1O、Y14和Y15中的两个、三个或全部已被硫酸化,或h. SEQ ID NO: 25, SEQ ID NO: 28, SEQ ID NO: 26 or SEQ ID NO: 29, preferably wherein two, three or all of Y3, Y10, Y14 and Y15 have been sulfated, or
i.SEQ ID NO:27或SEQ ID NO:30,优选地其中Y10、Y12和Y16中的两个或三个已被硫酸化,或i. SEQ ID NO: 27 or SEQ ID NO: 30, preferably wherein two or three of Y10, Y12 and Y16 have been sulfated, or
j.SEQ ID NO:31或SEQ ID NO:34,优选地其中Y18、Y26和Y27中的至少两个或三个已被硫酸化,或j. SEQ ID NO: 31 or SEQ ID NO: 34, preferably wherein at least two or three of Y18, Y26 and Y27 have been sulfated, or
k.SEQ ID NO:32或SEQ ID NO:35,优选地其中Y23、Y31和Y32中的至少两个或三个已被硫酸化,或k. SEQ ID NO: 32 or SEQ ID NO: 35, preferably wherein at least two or three of Y23, Y31 and Y32 have been sulfated, or
1.SEQ ID NO:33或SEQ ID NO:36,优选地其中Y13、Y18和Y19中的至少两个或三个已被硫酸化,或1. SEQ ID NO: 33 or SEQ ID NO: 36, preferably wherein at least two or three of Y13, Y18 and Y19 have been sulfated, or
m.SEQ ID NO:37、SEQ ID NO:40、SEQ ID NO:38或SEQ ID NO:41,优选地其中Y8和Y17中的一个或两个已被硫酸化,或m. SEQ ID NO: 37, SEQ ID NO: 40, SEQ ID NO: 38 or SEQ ID NO: 41, preferably wherein one or both of Y8 and Y17 have been sulfated, or
n.SEQ ID NO:39或SEQ ID NO:42,优选地其中Y8和Y17中的一个或两个以及任选的Y20已被硫酸化,或n. SEQ ID NO: 39 or SEQ ID NO: 42, preferably wherein one or both of Y8 and Y17 and optionally Y20 have been sulfated, or
o.SEQ ID NO:43、SEQ ID NO:44、SEQ ID NO:46或SEQ ID NO:47,优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,或o. SEQ ID NO: 43, SEQ ID NO: 44, SEQ ID NO: 46 or SEQ ID NO: 47, preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, or
p.SEQ ID NO:45或SEQ ID NO:48,优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,或p. SEQ ID NO: 45 or SEQ ID NO: 48, preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated, or
q.SEQ ID NO:61、SEQ ID NO:64、SEQ ID NO:62或SEQ ID NO:65,优选地其中至少Y28,优选地Y17和/或Y37也已被硫酸化,或q. SEQ ID NO: 61, SEQ ID NO: 64, SEQ ID NO: 62 or SEQ ID NO: 65, preferably wherein at least Y28, preferably Y17 and/or Y37 have also been sulfated, or
r.SEQ ID NO:63或SEQ ID NO:66,优选地其中至少Y28已被硫酸化,且优选地Y19也已被硫酸化;或r. SEQ ID NO: 63 or SEQ ID NO: 66, preferably wherein at least Y28 has been sulfated, and preferably Y19 has also been sulfated; or
s.SEQ ID NO:67、SEQ ID NO:70、SEQ ID NO:68或SEQ ID NO:71,优选地其中Y14和Y22中的至少一个或两个已被硫酸化,或s. SEQ ID NO: 67, SEQ ID NO: 70, SEQ ID NO: 68 or SEQ ID NO: 71, preferably wherein at least one or both of Y14 and Y22 have been sulfated, or
t.SEQ ID NO:69或SEQ ID NO:72,优选地其中Y14、Y17和Y22中的至少一个、两个或全部已被硫酸化,或t. SEQ ID NO: 69 or SEQ ID NO: 72, preferably wherein at least one, two, or all of Y14, Y17, and Y22 have been sulfated, or
u.SEQ ID NO:73或SEQ ID NO:76,优选地其中Y27已被硫酸化,或u. SEQ ID NO: 73 or SEQ ID NO: 76, preferably wherein Y27 has been sulfated, or
v.SEQ ID NO:74或SEQ ID NO:77,优选地其中Y14和Y28中的至少一个已被硫酸化,或v. SEQ ID NO: 74 or SEQ ID NO: 77, preferably wherein at least one of Y14 and Y28 has been sulfated, or
w.SEQ ID NO:75或SEQ ID NO:78,优选地其中至少Y6已被硫酸化,或w. SEQ ID NO: 75 or SEQ ID NO: 78, preferably wherein at least Y6 has been sulfated, or
x.SEQ ID NO:79或SEQ ID NO:82,优选地其中Y23和/或Y25已被硫酸化,或x. SEQ ID NO: 79 or SEQ ID NO: 82, preferably wherein Y23 and/or Y25 have been sulfated, or
y.SEQ ID NO:80或SEQ ID NO:83,优选地其中Y20和/或Y22已被硫酸化,或y. SEQ ID NO: 80 or SEQ ID NO: 83, preferably wherein Y20 and/or Y22 have been sulfated, or
z.SEQ ID NO:81或SEQ ID NO:84,优选地其中Y24已被硫酸化,或z. SEQ ID NO: 81 or SEQ ID NO: 84, preferably wherein Y24 has been sulfated, or
aa.SEQ ID NO:85,SEQ ID NO:88,SEQ ID NO:86,SEQ ID NO:89,SEQ ID NO:87或SEQ ID NO:90,优选地其中Y27和Y29中的至少一个或两个已被硫酸化,或aa. SEQ ID NO: 85, SEQ ID NO: 88, SEQ ID NO: 86, SEQ ID NO: 89, SEQ ID NO: 87 or SEQ ID NO: 90, preferably wherein at least one or both of Y27 and Y29 have been sulfated, or
bb.SEQ ID NO:91,SEQ ID NO:94,SEQ ID NO:92或SEQ ID NO:95,优选地其中至少Y12和/或Y21已被硫酸化,或bb. SEQ ID NO: 91, SEQ ID NO: 94, SEQ ID NO: 92 or SEQ ID NO: 95, preferably wherein at least Y12 and/or Y21 has been sulfated, or
cc.SEQ ID NO:93或SEQ ID NO:96,优选地其中至少Y23和/或Y14已被硫酸化,或cc. SEQ ID NO: 93 or SEQ ID NO: 96, preferably wherein at least Y23 and/or Y14 has been sulfated, or
dd.SEQ ID NO:97、SEQ ID NO:100、SEQ ID NO:98或SEQ ID NO:101,优选地其中Y3和Y27中的至少一个已被硫酸化,或dd. SEQ ID NO: 97, SEQ ID NO: 100, SEQ ID NO: 98 or SEQ ID NO: 101, preferably wherein at least one of Y3 and Y27 has been sulfated, or
ee.SEQ ID NO:99或SEQ ID NO:102,优选地其中至少Y3和/或Y14和/或Y20和/或Y6已被硫酸化,或ee.SEQ ID NO: 99 or SEQ ID NO: 102, preferably wherein at least Y3 and/or Y14 and/or Y20 and/or Y6 have been sulfated, or
ff.SEQ ID NO:103或SEQ ID NO:106,优选地其中Y6和Y10中的至少一个或两个已被硫酸化,或ff. SEQ ID NO: 103 or SEQ ID NO: 106, preferably wherein at least one or both of Y6 and Y10 have been sulfated, or
gg.SEQ ID NO:104或SEQ ID NO:107,优选地其中Y4、Y7和Y39中的至少两个或全部已被硫酸化,或gg. SEQ ID NO: 104 or SEQ ID NO: 107, preferably wherein at least two or all of Y4, Y7 and Y39 have been sulfated, or
hh.SEQ ID NO:105或SEQ ID NO:108,优选地其中Y11和Y15中的至少一个或两个已被硫酸化,或hh.SEQ ID NO: 105 or SEQ ID NO: 108, preferably wherein at least one or both of Y11 and Y15 have been sulfated, or
ii.SEQ ID NO:157或SEQ ID NO:160,优选地其中至少Y14已被硫酸化,或ii. SEQ ID NO: 157 or SEQ ID NO: 160, preferably wherein at least Y14 has been sulfated, or
jj.SEQ ID NO:158,优选地其中至少Y20已被硫酸化,或jj.SEQ ID NO: 158, preferably wherein at least Y20 has been sulfated, or
kk.SEQ ID NO:161,优选地其中至少Y20或Y22已被硫酸化,或kk.SEQ ID NO: 161, preferably wherein at least Y20 or Y22 has been sulfated, or
ll.SEQ ID NO:159或SEQ ID NO:162,优选地其中至少Y15已被硫酸化,或11. SEQ ID NO: 159 or SEQ ID NO: 162, preferably wherein at least Y15 has been sulfated, or
mm.SEQ ID NO:163或SEQ ID NO:166,优选地其中至少Y27已被硫酸化,或mm. SEQ ID NO: 163 or SEQ ID NO: 166, preferably wherein at least Y27 has been sulfated, or
nn.SEQ ID NO:164,优选地其中至少Y14已被硫酸化或nn.SEQ ID NO: 164, preferably wherein at least Y14 has been sulfated or
oo.SEQ ID NO:167,优选地其中至少Y14或Y28已被硫酸化,或oo.SEQ ID NO: 167, preferably wherein at least Y14 or Y28 has been sulfated, or
pp.SEQ ID NO:165或SEQ ID NO:168,优选地其中至少Y6已被硫酸化。pp. SEQ ID NO: 165 or SEQ ID NO: 168, preferably wherein at least Y6 has been sulfated.
根据优选的实施方式VI,提供根据优选实施方式I、II、III、IV或V中任一项的分离的抗体或抗原结合片段,其中用于结合第一分离的硫酸化多肽和/或所述七次跨膜受体的抗体的解离常数或EC50低于150nM、100nM、10nM、5nM、2.5nM、1nM、0.5或0.25nM。根据优选实施方式VII提供了根据优选实施方式I至VI中任一项的分离的抗体或抗原结合片段,其中分离的抗体或抗原结合片段特异性结合第二分离的硫酸化多肽,其包含七次跨膜受体的TRD,优选地其中第二分离的硫酸化多肽包含TRD的七次跨膜受体According to preferred embodiment VI, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I, II, III, IV, or V is provided, wherein the dissociation constant or EC50 of the antibody for binding the first separated sulfated polypeptide and/or the seven-transmembrane receptor is less than 150 nM, 100 nM, 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. According to preferred embodiment VII, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to VI is provided, wherein the separated antibody or antigen-binding fragment specifically binds a second separated sulfated polypeptide containing a seven-transmembrane receptor TRD, preferably wherein the second separated sulfated polypeptide contains a seven-transmembrane receptor of the TRD.
a.与第一分离的硫酸化多肽包含的TRD的七次跨膜受体不同,或a. Unlike the seven-transmembrane receptor of TRD contained in the first isolated sulfated polypeptide, or
b.是第一分离的硫酸化多肽包含的TRD的相应的七次跨膜受体,但来自不同的物种。b. is the first isolated sulfated polypeptide containing the corresponding seven-transmembrane receptor of TRD, but from a different species.
根据优选的实施方式VIII,提供了根据优选实施方式VII的分离的抗体或抗原结合片段,其中用于结合第二分离的硫酸化多肽和/或用于结合第二七次跨膜受体的抗体的解离常数或EC50低于10nM、5nM、2.5nM、1nM、0.5或0.25nM。根据优选的实施方式IX,提供根据优选实施方式I至VIII中任一项的分离的抗体或抗原结合片段,其中用于结合所述第一分离的硫酸化多肽的抗体的解离常数(KD)低于用于结合具有与所述第一分离的硫酸化的多肽相同的序列的第一分离的非硫酸化的肽的抗体的解离常量(KD)。根据优选的实施方式X,提供了根据优选的实施方式IX的分离的抗体或抗原结合片段,其中用于结合第一分离的非硫酸化多肽的抗体的解离常数和/或EC50高于150nM、250nM、500nM、1μM、2μM或3μM,或不可检测。根据优选的实施方式XI,提供了根据任何优选实施方式IX或X的分离的抗体或抗原结合片段,其中用于结合第一分离硫酸化多肽的抗体或片段的解离常数或EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,并且其中用于结合第一分离的非硫酸化多肽的抗体或片段的解离常数高于10nM、25nM、50nM、100nM、250nM或500nM,或者不可检测。根据优选的实施方式XII,提供了根据任何优选实施方式I至XI的分离的抗体或抗原结合片段,其中抗体包含人、大鼠或小鼠衍生的CDR。根据优选的实施方式XIII,提供了根据优选实施方式I至XII中任一项的分离的抗体或抗原结合片段,其中所述抗体According to preferred embodiment VIII, a separated antibody or antigen-binding fragment according to preferred embodiment VII is provided, wherein the dissociation constant or EC50 of the antibody for binding the second separated sulfated polypeptide and/or the antibody for binding the second seventh transmembrane receptor is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. According to preferred embodiment IX, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to VIII is provided, wherein the dissociation constant (KD) of the antibody for binding the first separated sulfated polypeptide is less than the dissociation constant (KD) of the antibody for binding a first separated non-sulfated peptide having the same sequence as the first separated sulfated polypeptide. According to preferred embodiment X, a separated antibody or antigen-binding fragment according to preferred embodiment IX is provided, wherein the dissociation constant and/or EC50 of the antibody for binding the first separated non-sulfated polypeptide is greater than 150 nM, 250 nM, 500 nM, 1 μM, 2 μM, or 3 μM, or is undetectable. According to preferred embodiment XI, a separated antibody or antigen-binding fragment according to any preferred embodiment IX or X is provided, wherein the dissociation constant or EC50 of the antibody or fragment for binding the first separated sulfated polypeptide is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM, or 0.25 nM, and wherein the dissociation constant of the antibody or fragment for binding the first separated non-sulfated polypeptide is greater than 10 nM, 25 nM, 50 nM, 100 nM, 250 nM, or 500 nM, or is undetectable. According to preferred embodiment XII, a separated antibody or antigen-binding fragment according to any preferred embodiment I to XI is provided, wherein the antibody comprises a human, rat, or mouse-derived CDR. According to preferred embodiment XIII, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to XII is provided, wherein the antibody...
a、包括人源CDR,和/或a. Including human-derived CDRs, and/or
b、对人和食蟹猴具有交叉反应性,和/或b. Cross-reactivity with humans and cynomolgus monkeys, and/or
c、其特征在于HCDR3区包含10至34%的酪氨酸和/或2至20%的组氨酸,和/或c. Characterized by the HCDR3 region comprising 10 to 34% tyrosine and/or 2 to 20% histidine, and/or
d、不调节七次跨膜受体的G蛋白非依赖性信号传导,和/或d. G protein-independent signaling that does not regulate seven-transmembrane receptors, and/or
e、是非内化抗体或其特征在于以低于同种型对照内化的1.5、2、3、4、5、6、7或10倍内化进入含有内源性靶表达的细胞,和/或e. It is a non-internalizing antibody or is characterized by internalization into cells containing endogenous target expression at a rate of 1.5, 2, 3, 4, 5, 6, 7, or 10 times lower than that of the isotype control, and/or
f、诱导ADCC和/或ADCPf. Inducing ADCC and/or ADCP
g、是人、大鼠或鼠IgG抗体,优选地人IgG 1抗体或鼠IgG2a抗体,和/或g, is a human, rat, or mouse IgG antibody, preferably a human IgG1 antibody or a mouse IgG2a antibody, and/or
h、是scFv、Fab、Fab’或F(ab’)2片段。h is a fragment of scFv, Fab, Fab’, or F(ab’)2.
根据优选的实施方式XIV,提供包含根据优选的实施方式I至XIII中任一项的抗体或抗原结合片段的缀合物,优选其中所述缀合物包含According to preferred embodiment XIV, a conjugate comprising an antibody or antigen-binding fragment according to any one of preferred embodiments I to XIII is provided, preferably wherein the conjugate comprises
a、放射性元素,a. Radioactive elements
b、细胞毒性剂,例如auristatin、maytansinoid、驱动蛋白纺锤体蛋白抑制剂、烟酰胺磷酸核糖基转移酶抑制剂或吡咯并苯二氮杂平衍生物,b. Cytotoxic agents, such as auristatin, maytansinoid, kinin spindle protein inhibitors, nicotinamide phosphoribosyltransferase inhibitors, or pyrrolobenzodiazepine derivatives.
c、另一抗体或抗原结合片段,或c. Another antibody or antigen-binding fragment, or
d、嵌合抗原受体。d. Chimeric antigen receptor.
根据优选的实施方式XV,提供了根据优选的实施方式I至XIII中任一项的抗体或抗原结合片段或根据优选实施方式XIV的缀合物用于治疗特征在于涉及表达七次跨膜蛋白的细胞的肿瘤或疾病,任选地与靶向检查点抑制剂的抗体组合。根据优选的实施方式XVI,提供了根据优选实施方式I至XIII任一项的抗体或抗原结合片段或根据优选实施方案XIV的缀合物用作体内或体外诊断剂。根据优选的实施方式XVII,提供了试剂盒,其包含根据优选实施方式I至XIII中任一项的抗体或抗原结合片段或根据优选实施方式XIV的缀合物以及使用说明书。According to preferred embodiment XV, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XIII, or a conjugate according to preferred embodiment XIV, is provided for treating tumors or diseases characterized by cells expressing a seven-transmembrane protein, optionally in combination with an antibody targeting a checkpoint inhibitor. According to preferred embodiment XVI, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XIII, or a conjugate according to preferred embodiment XIV, is provided for use as an in vivo or in vitro diagnostic agent. According to preferred embodiment XVII, a kit is provided comprising an antibody or antigen-binding fragment according to any one of preferred embodiments I to XIII, or a conjugate according to preferred embodiment XIV, and instructions for use.
结合CCR8的抗体Antibodies that bind to CCR8
以下方面7、8、9、10、11、12、13、14、15、16、17和18涉及特异性结合CCR8的抗体。虽然对每个方面进行了单独描述,但不同的结构或功能方面可以组合并建议彼此组合,除非明显不兼容。此外,除了明显不兼容的情况外,每个方面中的每个实施方式可以与相同或不同方面中的各个实施方式组合。The following aspects 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, and 18 relate to antibodies that specifically bind to CCR8. While each aspect is described individually, different structural or functional aspects may be combined and are suggested to be combined with each other, unless obviously incompatible. Furthermore, except in cases of obvious incompatibility, each embodiment in each aspect may be combined with embodiments in the same or different aspects.
如果没有明确说明,CCR8可以来自任何物种,例如人、猴、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼CCR8。结合来自至少两个物种(其中一个物种是人)的CCR8的抗体是高度优选的,并且建议与针对这些方面公开的每个实施方式组合。具有源自人的CDR的抗体是高度优选的并且建议与针对这些方面公开的每个实施方式组合。根据目前的方面,具有以至少21%的酪氨酸残基和/或至少2%、7%或10%的组氨酸的频率为特征的HCDR3结构域的抗体是高度优选的并且建议与针对以下方面的每个实施方式组合。根据目前的方面,高度优选同时诱导ADCC和ADCP的抗体,例如非岩藻糖基化抗体,并且建议与针对这些方面公开的每个实施方式组合。根据当前方面,低内化或非内化抗体或片段是高度优选的,并且建议与针对这些方面公开的每个实施方式组合。适用于所描述的每个方面的一些高度优选的特征在“根据‘所有方面’的优选组合”一节中描述。Unless otherwise specified, CCR8 can be derived from any species, such as human, monkey, macaque (cynomolgus monkey), rhesus monkey, rodent, mouse, rat, horse, cattle, pig, dog, cat, and camel CCR8. Antibodies conjugating CCR8 from at least two species (one of which is human) are highly preferred and are recommended for combination with each embodiment disclosed for these aspects. Antibodies having human-derived CDRs are highly preferred and are recommended for combination with each embodiment disclosed for these aspects. According to the present aspects, antibodies having an HCDR3 domain characterized by a frequency of at least 21% tyrosine residues and/or at least 2%, 7%, or 10% histidine residues are highly preferred and are recommended for combination with each embodiment for the following aspects. According to the present aspects, antibodies that simultaneously induce ADCC and ADCP, such as non-fucosylated antibodies, are highly preferred and are recommended for combination with each embodiment disclosed for these aspects. According to the present aspects, low-internalization or non-internalization antibodies or fragments are highly preferred and are recommended for combination with each embodiment disclosed for these aspects. Some highly preferred features applicable to each of the described aspects are described in the section “Preferred combinations according to ‘all aspects’”.
方面7-CCR8抗体结合硫酸化TRD7-CCR8 antibody binding to sulfated TRD
人CCR8的细胞外结构域可以被分为四个区域:The extracellular domain of human CCR8 can be divided into four regions:
(i)N端结构域,可细分为(i) The N-terminal structural domain can be further subdivided into
a)由氨基酸1至24形成的膜远端富含酪氨酸结构域(TRD)(SEQ ID NO:43)a) The distal end of the membrane formed by amino acids 1 to 24 is rich in tyrosine domains (TRD) (SEQ ID NO: 43)
b)氨基酸位置25处的半胱氨酸,以及b) Cysteine at amino acid position 25, and
c)LID结构域,由氨基酸26至35形成(SEQ ID NO:49)c) The LID domain, formed by amino acids 26 to 35 (SEQ ID NO: 49)
(iii)根据SEQ ID NO:52的胞外结构域1(ECL1),(iii) Based on extracellular domain 1 (ECL1) of SEQ ID NO: 52,
(iii)根据SEQ ID NO:55的胞外结构域2(ECL2),和(iii) Based on the extracellular domain 2 (ECL2) of SEQ ID NO: 55, and
(iv)根据SEQ ID NO:58的胞外结构域3(ECL3)。(iv) Extracellular domain 3 (ECL3) according to SEQ ID NO: 58.
根据第七方面,其可以与第六方面相同或不同,提供了一种分离的抗体或其抗原结合片段,其特异性结合CCR8的硫酸化酪氨酸富集结构域。According to the seventh aspect, which may be the same as or different from the sixth aspect, a separate antibody or its antigen-binding fragment specifically binds to the sulfated tyrosine enrichment domain of CCR8.
例如,抗体或抗原结合片段与第一分离的硫酸化多肽结合,所述多肽包括For example, an antibody or antigen-binding fragment binds to a first isolated sulfated polypeptide, said polypeptide comprising...
a)CCR8的富含酪氨酸结构域(TRD)或a) The tyrosine-rich domain (TRD) of CCR8 or
b)包含TRD的CCR8的N端,b) The N-terminus of CCR8 containing TRD,
任选地,其中至少TRD和LID结构域之间的半胱氨酸已被移除或已被交换成不同的氨基酸。根据当前方面的硫酸化多肽是其中优选至少25%、至少50%或至少75%的TRD的酪氨酸残基被硫酸化的多肽。当多肽包含含有TRD的CCR8的N端时,优选地TRD和LID结构域之间的半胱氨酸已被交换成丝氨酸或已被去除。Optionally, at least the cysteine residue between the TRD and LID domains has been removed or replaced with a different amino acid. A sulfated polypeptide according to the present aspect is a polypeptide in which preferably at least 25%, at least 50%, or at least 75% of the tyrosine residues of the TRD are sulfated. When the polypeptide contains the N-terminus of a CCR8 containing the TRD, preferably the cysteine residue between the TRD and LID domains has been replaced with a serine residue or has been removed.
在不受理论束缚的情况下,所提供的CCR8硫酸化模式的特异性识别似乎影响了抗体是否与CCL1(CCR8的天然配体)竞争,以及抗体是否以及如何激动或拮抗CCR8信号传导,例如根据第11方面所述。Without being bound by theory, the specific recognition of the provided CCR8 sulfation pattern appears to influence whether the antibody competes with CCL1 (the natural ligand of CCR8) and whether and how the antibody stimulates or antagonizes CCR8 signaling, as described in aspect 11.
在根据当前方面的一些优选实施方式中,本发明抗体结合人和/或食蟹猴CCR8的硫酸化TRD,KD值为<5E-8M,<4E-8M,<3E-8M,<2E-8M,<1E-8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,或<9E-11M。例如,本发明抗体以<8E-9M和>4E-10M之间的KD值结合人和/或食蟹猴CCR8的硫酸化TRD。例如,本发明的抗体可以结合人和/或食蟹猴CCR8的硫酸化TRD,KD值在<8E-9M和>5.5E-10M之间。在这些实施方式的的一些进一步优选的实施方式,本发明的抗体结合以基本相同KD值结合人和/或食蟹猴CCR8的N端(即包含上述硫酸化TRD)。在这些实施方式的一些最优选实施方式中,本发明的抗体基本上不结合人和/或食蟹猴CCR8的非硫酸化TRD。In some preferred embodiments according to the present aspect, the antibody of the present invention binds to sulfated TRD of human and/or cynomolgus monkey CCR8 with a KD value of <5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, <1.5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, or <9E-11M. For example, the antibodies of the present invention bind to sulfated TRDs of human and/or cynomolgus monkey CCR8 with KD values between <8E-9M and >4E-10M. For example, the antibodies of the present invention can bind to sulfated TRDs of human and/or cynomolgus monkey CCR8 with KD values between <8E-9M and >5.5E-10M. In some further preferred embodiments of these embodiments, the antibodies of the present invention bind to the N-terminus of human and/or cynomolgus monkey CCR8 (i.e., containing the aforementioned sulfated TRD) with substantially the same KD value. In some most preferred embodiments of these embodiments, the antibodies of the present invention substantially do not bind to non-sulfated TRDs of human and/or cynomolgus monkey CCR8.
在根据当前方面的一些优选实施方式中,本发明抗体结合人和/或食蟹猴CCR8的硫酸化N端,KD值为<5E-8M,<4E-8M,<3E-8M,<2E-8M,<1E-8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,<9E-11M,<8E-11M,<7E-11M,<6E-11M,或<5E-11M。例如,本发明抗体可以<8E-9M和>8E-11M之间的KD值结合人和/或食蟹猴CCR8的硫酸化N端。在这些实施方式中的一些进一步优选的实施方式中,本发明抗体以基本相同的KD值或相同数量级内的KD值结合人和/或食蟹猴CCR8的硫酸化TRD(即,上述硫酸化N端的子序列)。在这些实施方式中的一些最优选的实施方式中,本发明抗体基本上不结合人和/或食蟹猴CCR8的非硫酸化TRD。In some preferred embodiments according to the present aspect, the antibody of the present invention binds to the sulfated N-terminus of human and/or cynomolgus monkey CCR8 with a KD value of <5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, < 1.5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, <9E-11M, <8E-11M, <7E-11M, <6E-11M, or <5E-11M. For example, the antibody of the present invention can bind to the sulfated N-terminus of human and/or cynomolgus monkey CCR8 at KD values between <8E-9M and >8E-11M. In some further preferred embodiments of these embodiments, the antibody of the present invention binds to the sulfated TRD (i.e., the subsequence of the sulfated N-terminus described above) of human and/or cynomolgus monkey CCR8 at substantially the same KD value or within the same order of magnitude. In some of the most preferred embodiments of these implementations, the antibody of the present invention is substantially non-sulfated TRD of human and/or cynomolgus monkey CCR8.
根据第7方面的一些第一实施方式,第一分离的硫酸化多肽包括According to some first embodiments of aspect 7, the first isolated sulfated polypeptide includes
a)SEQ ID NO:43(CCR8_HUMAN_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,a) SEQ ID NO: 43 (CCR8_HUMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
b)SEQ ID NO:44(CCR8_MACFA_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) SEQ ID NO: 44 (CCR8_MACFA_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)SEQ ID NO:45(CCR8_MOUSE_TRD),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。c) SEQ ID NO: 45 (CCR8_MOUSE_TRD), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
根据第7方面的一些第二实施方式,第一分离的硫酸化多肽包括According to some second embodiments of aspect 7, the first isolated sulfated polypeptide includes
a)SEQ ID NO:46(CCR8_HUMAN_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,a) SEQ ID NO: 46 (CCR8_HUMAN_N term, C = X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
b)SEQ ID NO:47(CCR8_MACFA_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) SEQ ID NO: 47 (CCR8_MACFA_N term, C = X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)SEQ ID NO:48(CCR8_MOUSE_N term,c=X或S),优选地其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。c) SEQ ID NO: 48 (CCR8_MOUSE_N term, c = X or S), preferably wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
根据第七方面的一些第三实施方式,其可以与第一和/或第二实施方式相同或不同,抗体或抗原结合片段以<15nM、<10nM、<5nM、<1nM或<0.6nM的解离常数或EC50特异性结合第一分离的硫酸化多肽。According to some third embodiments of the seventh aspect, which may be the same as or different from the first and/or second embodiments, the antibody or antigen-binding fragment binds to the first isolated sulfated polypeptide with a dissociation constant or EC50 of <15nM, <10nM, <5nM, <1nM or <0.6nM.
根据这些实施方式中的一些优选实施方式,分离的抗体或其抗原结合片段以<15nM、<10nM、<5nM、<1nM或<0.6nM的解离常数或EC50特异性结合According to some preferred embodiments of these embodiments, the isolated antibody or its antigen-binding fragment binds specifically with a dissociation constant or EC50 of <15 nM, <10 nM, <5 nM, <1 nM, or <0.6 nM.
a)人CCR8或根据SEQ ID NO:46的分离多肽,其中Y3、Y15和Y17中至少两个或全部已被硫酸化,a) Human CCR8 or the isolated polypeptide according to SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated.
b)食蟹猴CCR8或根据SEQ ID NO:47的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) Cynomolgus monkey CCR8 or the polypeptide isolated according to SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)鼠CCR8或根据SEQ ID NO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。c) Mouse CCR8 or a polypeptide isolated according to SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
根据第七方面的一些第四实施方式,其可以并且建议与第七方面第一、第二和/或第三实施方式组合,用于结合第一分离的硫酸化多肽的抗体的解离常数(KD)低于用于结合与第一分离的硫酸盐化多肽具有相同序列的分离的非硫酸化多肽抗体的解离常数(KD)。According to some fourth embodiments of the seventh aspect, it may and is suggested to be combined with the first, second and/or third embodiments of the seventh aspect, wherein the dissociation constant (KD) of the antibody for binding the first isolated sulfated polypeptide is lower than the dissociation constant (KD) of the antibody for binding the isolated non-sulfated polypeptide having the same sequence as the first isolated sulfated polypeptide.
根据这些第四实施方式的一些实施方式A,用于结合分离的非硫酸化多肽的抗体的解离常数或EC50高于1pM,10nM,25nM,50nM,100nM,150nM,200nM,250nM,300nM,350nM,400nM,450nM,500nM,600nM,700nM,800nM,900nM,1μM,1.25μM,1.5μM,1.75μM,2μM,2.25μM,2.5μM,2.75μM,or 3μM,5μM或无法检测。优选地,用于结合分离的非硫酸化多肽的抗体的解离常数或EC50高于100nM、250nM、500nM、1μM、2μM或3μM,或不可检测。According to some embodiments A of these fourth embodiments, the dissociation constant or EC50 of the antibody used to bind the isolated non-sulfated peptide is higher than 1 pM, 10 nM, 25 nM, 50 nM, 100 nM, 150 nM, 200 nM, 250 nM, 300 nM, 350 nM, 400 nM, 450 nM, 500 nM, 600 nM, 700 nM, 800 nM, 900 nM, 1 μM, 1.25 μM, 1.5 μM, 1.75 μM, 2 μM, 2.25 μM, 2.5 μM, 2.75 μM, or 3 μM, or is undetectable. Preferably, the dissociation constant or EC50 of the antibody used to bind the isolated non-sulfated peptide is higher than 100 nM, 250 nM, 500 nM, 1 μM, 2 μM, or 3 μM, or is undetectable.
根据这些第四实施方式的一些实施方式B,其可以与这些第二实施方式的实施方式A相同,用于结合第一分离的硫酸化多肽的抗体的解离常数或EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,并且用于结合分离的非硫酸化多肽的抗体的解离常数或EC50高于10nM、25nM、50nM、100nM、250nM或500nM,或者不可检测。According to some embodiments B of these fourth embodiments, which may be the same as embodiments A of these second embodiments, the dissociation constant or EC50 of the antibody used to bind the first isolated sulfated polypeptide is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM, and the dissociation constant or EC50 of the antibody used to bind the isolated non-sulfated polypeptide is greater than 10 nM, 25 nM, 50 nM, 100 nM, 250 nM or 500 nM, or is undetectable.
方面8-包含人CDR的CCR8抗体Aspect 8 - CCR8 antibody containing human CDR
根据第8方面,其可与第6或第7方面相同或不同,提供了一种(特别地)结合CCR8分离的抗体或其抗原结合片段,其中所述抗体包含人源CDR。最优选地,抗体或其抗原结合片段(特别地)结合CCR8的硫酸化TRD。根据一些优选实施方式,单个CDR与最近的人类生殖系的偏差少于1、2、3、4、5或6。根据一些高度优选的实施方式,人源CDR与最近的人类生殖系的偏差不超过或小于1、2、3、4、5、6、7、8、9、10、11、12、13、14或15。最接近的人类生殖系可以如本领域已知的那样确定,例如使用IgBLAST用从IMGT人类生殖系数据库检索的数据,如本文其他地方所讨论的。According to aspect 8, which may be the same as or different from aspect 6 or 7, an antibody or antigen-binding fragment thereof that binds to CCR8 isolates is provided (particularly) wherein the antibody comprises a human CDR. Most preferably, the antibody or antigen-binding fragment thereof binds (particularly) a sulfated TRD of CCR8. According to some preferred embodiments, the deviation of a single CDR from the nearest human germline is less than 1, 2, 3, 4, 5, or 6. According to some highly preferred embodiments, the deviation of the human CDR from the nearest human germline is no more than or less than 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, or 15. The nearest human germline can be determined as is known in the art, for example using IgBLAST with data retrieved from the IMGT human germline database, as discussed elsewhere herein.
虽然抗体与非人类CDR的人源化可以提高免疫原性,但残留免疫原性存在于CDR区(Harding,Fiona A.,et al.″The immunogenicity of humanized and fully humanantibodies:residual immunogenicity resides in the CDR regions.″MAbs.Vol.2.No.3.Taylor&Francis,2010)。因此,认为根据当前方面的包含人源CDR和少量种系偏差的抗体具有作为治疗剂的优越适用性。Although humanization of antibodies with non-human CDRs can enhance immunogenicity, residual immunogenicity remains in the CDR regions (Harding, Fiona A., et al. "The immunogenicity of humanized and fully human antibodies: residual immunogenicity resides in the CDR regions." MAbs. Vol. 2. No. 3. Taylor & Francis, 2010). Therefore, antibodies containing human CDRs and minimal germline bias are considered to have superior suitability as therapeutic agents according to current understanding.
包含人源性CDR的抗体可如本文所述获得,例如通过使用实施例4和6中所述的人噬菌体展示文库。在替代方案中,具有人CDR的抗体也可使用不能表达功能性内源性免疫球蛋白但能表达人免疫球蛋白基因的转基因小鼠产生。此外,还可通过使用体外激活的B细胞生成包含人类CDR的抗体(参见U.S.Pat.Nos.5,567,610和5,229,275,各自的全部内容通过引用并入本文)。Antibodies containing human CDRs can be obtained as described herein, for example, by using human phage display libraries as described in Examples 4 and 6. Alternatively, antibodies containing human CDRs can also be produced using transgenic mice that do not express functional endogenous immunoglobulins but do express human immunoglobulin genes. Furthermore, antibodies containing human CDRs can also be generated using in vitro activated B cells (see U.S. Pat. Nos. 5,567,610 and 5,229,275, the entire contents of which are incorporated herein by reference).
所提供的包含人源CDR的分离抗体或抗原结合片段优选也是根据方面9、10、11、12、13、14、15、16、17或18中任一项的抗体或其组合。The provided isolated antibody or antigen-binding fragment containing a human CDR is preferably an antibody or combination thereof according to any one of aspects 9, 10, 11, 12, 13, 14, 15, 16, 17 or 18.
方面9-交叉反应性CCR8抗体Aspect 9 - Cross-reactive CCR8 antibody
根据第九方面,其可以与第六、第七和/或第八方面相同或不同,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中所述抗体或抗原结合片段对来自至少两种物种的CCR8具有交叉反应性,优选地选自人、猴、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼,甚至更优选选自人、食蟹猴和小鼠。根据一些最优选的实施方式,抗体或抗原结合片段对人和食蟹猴CCR8是交叉反应的。According to the ninth aspect, which may be the same as or different from the sixth, seventh, and/or eighth aspects, a separated antibody or antigen-binding fragment thereof specifically binding to CCR8 is provided, wherein the antibody or antigen-binding fragment is cross-reactive to CCR8 from at least two species, preferably selected from humans, monkeys, macaques (cynomolgus monkeys), rhesus monkeys, rodents, mice, rats, horses, cattle, pigs, dogs, cats, and camels, and even more preferably selected from humans, cynomolgus monkeys, and mice. According to some of the most preferred embodiments, the antibody or antigen-binding fragment is cross-reactive to human and cynomolgus monkey CCR8.
在优选实施方式中,所述抗体或抗原结合片段以第一解离常数KD结合来自第一物种的CCR8,并以第二解离常数KD与来自第二物种的CCR8结合,其中所述第一解离常数和所述第二解离常量处于相同的数量级。如本领域技术人员所理解的,两个值之间的数量级差是10倍。In a preferred embodiment, the antibody or antigen-binding fragment binds to CCR8 from a first species with a first dissociation constant KD and to CCR8 from a second species with a second dissociation constant KD, wherein the first and second dissociation constants are on the same order of magnitude. As those skilled in the art will understand, the order of magnitude difference between the two values is 10-fold.
交叉反应性抗CCR8抗体有利于治疗性抗体的开发,因为它们可用于非人类动物模型,以便在将抗体施用于人类之前,在药理学数据和安全性方面表征治疗剂。然而,在两个物种中具有相似结合行为的交叉反应抗体很难产生,因为CCR8中可用于抗体识别的部分在物种之间的同源性较低(见实施例2)。根据本发明,CCR8的交叉反应抗体可以通过使用包含物种之间具有更高保守性的基序的小硫酸化酪氨酸产生,使得以相同数量级亲和力结合来自两个或更多物种的CCR8的交叉反应抗体可以以简单方便的方式获得。更详细地说,抗体特异性结合硫酸化TRD基序,并且可以获得交叉反应抗体,因为这些硫酸化TRD基序在物种之间是保守的。Cross-reactive anti-CCR8 antibodies are advantageous for the development of therapeutic antibodies because they can be used in non-human animal models to characterize therapeutic agents in terms of pharmacological data and safety before administration to humans. However, cross-reactive antibodies with similar binding behavior in two species are difficult to generate because the portions of CCR8 available for antibody recognition have low homology between species (see Example 2). According to the invention, cross-reactive antibodies against CCR8 can be generated by using small sulfated tyrosine residues containing motifs that are more conserved between species, making it easy and convenient to obtain cross-reactive antibodies that bind to CCR8 from two or more species with the same order of magnitude affinity. More specifically, antibodies specifically bind sulfated TRD motifs, and cross-reactive antibodies can be obtained because these sulfated TRD motifs are conserved between species.
在根据当前方面的一些优选实施方式中,本发明抗体结合人和食蟹猴CCR8的硫酸化TRD,KD值为<5E-8M,<4E-8M,<3E-8M,<2E-8M,<1E-8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,或<9E-11M。例如,本发明抗体可以<8E-9M和>4E-10M之间的KD值结合人和食蟹猴CCR8的硫酸化TRD。例如,本发明的抗体可以<8E-9M和>5.5E-10M之间的KD值结合人和食蟹猴CCR8的硫酸化TRD。在这些实施方式的一些进一步优选的实施方式中,本发明的抗体以基本相同的KD值或在一个数量级的KD结合人和食蟹猴CCD8的硫酸化N端(即包含前述的硫酸化TRD)。在这些实施方式的最优选实施方式中,本发明的抗体基本上不结合人和食蟹猴CCR8的非硫酸化TRD。In some preferred embodiments according to the present aspect, the antibody of the present invention binds to the sulfated TRD of human and cynomolgus monkey CCR8 with a KD value of <5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, <1.5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, or <9E-11M. For example, the antibody of the present invention can bind to the sulfated TRD of human and cynomolgus monkey CCR8 with a KD value between <8E-9M and >4E-10M. For example, the antibody of the present invention can bind to the sulfated TRD of human and cynomolgus monkey CCR8 with a KD value between <8E-9M and >5.5E-10M. In some further preferred embodiments of these embodiments, the antibody of the present invention binds to the sulfated N-terminus of human and cynomolgus monkey CCD8 (i.e., containing the aforementioned sulfated TRD) with substantially the same KD value or an order of magnitude higher. In the most preferred embodiment of these embodiments, the antibody of the present invention substantially does not bind to the non-sulfated TRD of human and cynomolgus monkey CCR8.
在根据当前方面的一些优选实施方式中,本发明抗体结合人和食蟹猴CCR8的硫酸化N端,KD值为<5E-8M,<4E-8M,<3E-8M,<2E-8M,<1E-8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,<9E-11M,<8E-11M,<7E-11M,<6E-11M,或<5E-11M。例如,本发明抗体可以<8E-9M和>8E-11M之间的KD值结合人和食蟹猴CCR8的硫酸化N端。在这些实施方式中的一些进一步优选的实施方式中,本发明抗体以基本相同的KD值或相同数量级的值结合人和食蟹猴CCR8的硫酸化TRD(即上述硫酸化N端的子序列)。在这些实施方式中的一些最优选的实施方式中,本发明抗体基本上不结合人和食蟹猴CCR8的非硫酸化TRD。In some preferred embodiments according to the present aspect, the antibody of the present invention binds to the sulfated N-terminus of human and cynomolgus monkey CCR8 with a KD value of <5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, <1 <5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, <9E-11M, <8E-11M, <7E-11M, <6E-11M, or <5E-11M. For example, the antibody of the present invention can bind to the sulfated N-terminus of human and cynomolgus monkey CCR8 at KD values between <8E-9M and >8E-11M. In some further preferred embodiments of these embodiments, the antibody of the present invention binds to the sulfated TRD (i.e., the subsequence of the sulfated N-terminus described above) of human and cynomolgus monkey CCR8 at substantially the same KD value or the same order of magnitude. In some of the most preferred embodiments of these implementations, the antibody of the present invention is substantially non-sulfated TRD of human and cynomolgus monkey CCR8.
根据第9方面的一些第一实施方式,抗体特异性结合According to some first embodiments of aspect 9, antibody-specific binding
a)第一分离的硫酸化多肽,其包含SEQ ID NO:46(CCR8_HUMAN_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和第二分离的硫酸多肽,其包含SEQ ID NO:47(CCR8_MACFA_N term,C=X或者S),优选地Y3、Y5和Y17中的至少两个或全部已被硫酸化;或a) A first isolated sulfated polypeptide comprising SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated; and a second isolated sulfated polypeptide comprising SEQ ID NO: 47 (CCR8_MACFA_N term, C=X or S), preferably wherein at least two or all of Y3, Y5 and Y17 have been sulfated; or
b)包含SEQ ID NO:43(CCR8_HUMAN_TRD)的第一分离的硫酸化多肽,优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和包含SEQ ID NO:44(CCR8_MACFA_TRD)的第二分离的硫酸多肽,优选地Y3、Y5和Y17中的至少两个或全部已被硫酸化。b) A first isolated sulfated polypeptide comprising SEQ ID NO: 43 (CCR8_HUMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 44 (CCR8_MACFA_TRD), preferably wherein at least two or all of Y3, Y5 and Y17 have been sulfated.
优选地,用于结合人CCR8或用于结合第一分离的硫酸化多肽的抗体或抗原结合片段的EC50低于200nM、150nM、100nM、10nM、5nM、2.5nM、1nM、0.5或0.25nM,例如低于10nM,5nM,2.5nM,1nM,0.5或0.25nM。优选地,用于结合食蟹猴CCR8或用于结合第二分离的硫酸化多肽的抗体或抗原结合片段的EC50低于10nM、5nM、2.5nM、1nM、0.5或0.25nM。在一些优选的实施方式中,抗体以基本相同的亲和力结合第一分离的硫酸化多肽和第二分离的硫酸多肽。Preferably, the EC50 of the antibody or antigen-binding fragment used to bind human CCR8 or to bind the first isolated sulfated polypeptide is less than 200 nM, 150 nM, 100 nM, 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM, for example less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. Preferably, the EC50 of the antibody or antigen-binding fragment used to bind cynomolgus monkey CCR8 or to bind the second isolated sulfated polypeptide is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. In some preferred embodiments, the antibodies bind the first isolated sulfated polypeptide and the second isolated sulfated polypeptide with substantially the same affinity.
根据第9方面的一些第二实施方式,抗体特异性结合According to some second embodiments of aspect 9, antibody-specific binding
a)第一分离的硫酸化多肽,其包含SEQ ID NO:46(CCR8_HUMAN_N term,C=X或S),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和第二分离的硫酸多肽,其包含SEQ ID NO:48(CCR8_MOUSE_N term,C=X和S),优选地Y3、Y4和Y15中的至少两个或全部已被硫酸化;或a) A first isolated sulfated polypeptide comprising SEQ ID NO: 46 (CCR8_HUMAN_N term, C=X or S), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 48 (CCR8_MOUSE_N term, C=X and S), preferably wherein at least two or all of Y3, Y4 and Y15 have been sulfated; or
b)第一分离的硫酸化多肽,其包含SEQ ID NO:43(CCR8_UMAN_TRD),优选地其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和第二分离的硫酸多肽,其包含SEQ ID NO:45(CCR8_MOUSE_TRD),优选地其中Y13、Y14和Y15中的至少两个或全部已被硫酸化。b) A first isolated sulfated polypeptide comprising SEQ ID NO: 43 (CCR8_UMAN_TRD), preferably wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and a second isolated sulfated polypeptide comprising SEQ ID NO: 45 (CCR8_MOUSE_TRD), preferably wherein at least two or all of Y13, Y14 and Y15 have been sulfated.
优选地,用于结合人CCR8或用于结合第一分离的硫酸化多肽的抗体或抗原结合片段的EC50低于200nM、150nM、100nM、10nM、5nM、2.5nM、1nM、0.5或0.25nM,例如低于10nM,5nM,2.5nM,1nM,0.5或0.25nM。优选地,用于结合鼠CCR8或用于结合第二分离的硫酸化多肽的抗体或抗原结合片段的EC50低于10nM、5nM、2.5nM、1nM、0.5或0.25nM。在一些优选实施方式中,抗体以基本相同的亲和力结合第一分离的硫酸化多肽和第二分离的硫酸多肽。Preferably, the EC50 of the antibody or antigen-binding fragment used to bind human CCR8 or to bind the first isolated sulfated polypeptide is less than 200 nM, 150 nM, 100 nM, 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM, for example less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. Preferably, the EC50 of the antibody or antigen-binding fragment used to bind mouse CCR8 or to bind the second isolated sulfated polypeptide is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5, or 0.25 nM. In some preferred embodiments, the antibodies bind the first isolated sulfated polypeptide and the second isolated sulfated polypeptide with substantially the same affinity.
所提供的分离的抗体或抗原结合片段优选也是根据方面7、8、10、11、12、13、14、15、16、17或18中任一方面的抗体或其组合。The provided isolated antibody or antigen-binding fragment is preferably also an antibody or combination thereof according to any one of aspects 7, 8, 10, 11, 12, 13, 14, 15, 16, 17 or 18.
方面10-由HCDR3结构定义的CCR8抗体Aspect 10 - CCR8 antibody defined by HCDR3 structure
根据第十方面,其可以与第六、第七、第八和/或第九方面相同或不同,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中所述抗体或抗原结合片段的特征在于具有增加的组氨酸和/或酪氨酸频率的HCDR3区。如本领域技术人员所理解的,尽管单独讨论了每个氨基酸的频率,但是各个频率是相互关联的,并且建议将其组合,除非技术人员立即认识到它们的不相容性。对于CDR区的测定,本文使用Kabat的免疫球蛋白氨基酸残基编号系统,如有疑问,应为决定性的。According to aspect ten, which may be identical or different from aspects six, seven, eight, and/or nine, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein said antibody or antigen-binding fragment is characterized by an HCDR3 region having increased histidine and/or tyrosine frequencies. As will be understood by those skilled in the art, although the frequencies of each amino acid are discussed individually, the frequencies are interrelated and are suggested to be combined unless their incompatibility is immediately apparent to those skilled in the art. For the determination of the CDR region, the Kabat immunoglobulin amino acid residue numbering system is used herein, and should be definitive in case of doubt.
令人惊讶地发现,根据本发明的CCR8抗体的特征在于HCDR3的酪氨酸残基频率显著高于具有匹配长度的随机全人类HCDR3(约10%,参见Zemlin,Michael,et al.″Expressed murine and human CDR-H3 intervals of equal length exhibit distinctrepertoires that differ in their amino acid composition and predicted rangeof structures.″Journal of molecular biology 334.4(2003):733-749)。平均而言,本发明抗体的初始组包含约20.6%的酪氨酸残基,而优化的特异性人CCR8结合抗体的组包含HCDR3中平均21%的酪氨酸残基。Surprisingly, the CCR8 antibody according to the invention is characterized by a significantly higher frequency of tyrosine residues in HCDR3 than that in random whole-human HCDR3 of matched length (approximately 10%, see Zemlin, Michael, et al. "Expressed murine and human CDR-H3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures." Journal of molecular biology 334.4 (2003): 733-749). On average, the initial set of antibodies of the invention contains approximately 20.6% tyrosine residues, while the optimized set of specific human CCR8 binding antibodies contains an average of 21% tyrosine residues in HCDR3.
此外,带正电荷的氨基酸的数量,特别是组氨酸残基的数量高于预期,特别是在具有改进的治疗特征的优化抗体组中,参见实施例9。平均而言,当总结时,组氨酸残基和酪氨酸残基占优化组的CCR8结合抗体的HCDR3中所有氨基酸的31%。Furthermore, the number of positively charged amino acids, particularly histidine residues, was higher than expected, especially in the optimized antibody group with improved therapeutic characteristics (see Example 9). On average, when summarized, histidine and tyrosine residues accounted for 31% of all amino acids in HCDR3 of the CCR8-binding antibody in the optimized group.
有趣的是,包含硫酸化TRD的所用抗原的特征在于酪氨酸残基和特别高数量的负电荷,其通过硫酸化进一步增加。在不受理论束缚的情况下,本发明人认为本发明抗体的CDRH3中对高酪氨酸和组氨酸含量的偏好是由抗原的特定硫酸化基序引起的,并且HCDR3中高酪氨酸/组氨酸含量促进抗原的特异性识别。在不受理论束缚的情况下,本发明人进一步相信,这种特异性识别影响所获得的抗体作为CCR8的调节剂的特性,例如如方面11中所讨论的。Interestingly, the antigens used containing sulfated TRDs are characterized by tyrosine residues and a particularly high number of negative charges, which are further increased by sulfation. Without being bound by theory, the inventors believe that the preference for high tyrosine and histidine content in the CDRH3 of the antibodies of the present invention is caused by specific sulfated motifs of the antigen, and that the high tyrosine/histidine content in HCDR3 promotes specific antigen recognition. Without being bound by theory, the inventors further believe that this specific recognition affects the properties of the obtained antibodies as regulators of CCR8, as discussed, for example, in aspect 11.
在第十方面的一些高度优选的实施方式中,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中所述抗体或片段的特征在于HCDR3区,其包含10%至34%的酪氨酸和/或2%至20%的组氨酸。In some highly preferred embodiments of the tenth aspect, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or fragment is characterized in the HCDR3 region, which contains 10% to 34% tyrosine and/or 2% to 20% histidine.
所提供的分离的抗体或抗原结合片段优选地也是根据方面7、8、9、11、12、13、14、15、16、17或18中任一方面的抗体或其组合。The provided isolated antibody or antigen-binding fragment is preferably also an antibody or combination thereof according to any one of aspects 7, 8, 9, 11, 12, 13, 14, 15, 16, 17 or 18.
在第十方面的一些第一实施方式,分离的抗体或抗原结合片段包含含有如下的HCDR3In some first embodiments of the tenth aspect, the isolated antibody or antigen-binding fragment contains HCDR3 as follows.
a)>0且<35%、>8且<34%、≥10且≤34%,或>15且<31%的酪氨酸(Y)残基,和/或a) >0 and <35%, >8 and <34%, ≥10 and ≤34%, or >15 and <31% of tyrosine (Y) residues, and/or
b)>0且≤16%、≥2且≤20%或≥7且≤20%组氨酸(H)残基,和b) >0 and ≤16%, ≥2 and ≤20%, or ≥7 and ≤20% of histidine (H) residues, and
c)优选地≥0且≤18%、≥7且≤10%或≥0且≤7%精氨酸(R)残基,和/或c) Preferably ≥0 and ≤18%, ≥7 and ≤10%, or ≥0 and ≤7% arginine (R) residues, and/or
d)优选地≥0且≤25%、≥7且≤16%或≥7且≤13%的天冬氨酸(D)残基,和/或d) Preferably, ≥0 and ≤25%, ≥7 and ≤16%, or ≥7 and ≤13% of aspartic acid (D) residues, and/or
e)优选地没有赖氨酸(K)残基,和/或e) Preferably, there are no lysine (K) residues, and/or
f)优选地没有谷氨酸(E)残基。f) Preferably, there are no glutamic acid (E) residues.
在第十方面的某些第二实施方式中,其可以与第一实施方式相同或不同,分离的抗体或抗原结合片段包含具有以下的HCDR3In some second embodiments of the tenth aspect, which may be the same as or different from the first embodiment, the isolated antibody or antigen-binding fragment contains HCDR3 having the following...
a)>0且<47%、>22且<50%、>10且<34%,或>15且<47%带电氨基酸,和/或a) >0 and <47%, >22 and <50%, >10 and <34%, or >15 and <47% charged amino acids, and/or
b)>0且<32%,>8且<30%,或>10且<37%带正电荷的氨基酸,和/或b) >0 and <32%, >8 and <30%, or >10 and <37% of positively charged amino acids, and/or
c)>0且<26%,≥7且<16%,或>7且<14%带负电荷的氨基酸。c) >0 and <26%, ≥7 and <16%, or >7 and <14% of negatively charged amino acids.
在第十方面的某些第三实施方式中,其可与第一和/或第二实施方式相同或不同,分离的抗体或抗原结合片段包含具有>0且≤42%、≥10且≤42%或≥36且≤43%组氨酸和酪氨酸残基总数的HCDR3。In certain third embodiments of the tenth aspect, which may be the same as or different from the first and/or second embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having a total histidine and tyrosine residues of >0 and ≤42%, ≥10 and ≤42%, or ≥36 and ≤43%.
酪氨酸(Y)Tyrosine (Y)
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有33%、31%、25%、23%、21%、20%、18%、15%、10%、9%、8%或0%的酪氨酸的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且<35%、(b)>8且<34%、(c)>10且<34%、或(d)>15和<31%酪氨酸的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 33%, 31%, 25%, 23%, 21%, 20%, 18%, 15%, 10%, 9%, 8%, or 0% tyrosine residues. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and <35%, (b) >8 and <34%, (c) >10 and <34%, or (d) >15 and <31% tyrosine residues.
在一些实施方式中,分离的抗体或抗原结合片段包含具有>8,>9,>10,>11,>12,>13,>14,>15,>16,>17,>18,>19,>20,>21,>22,>23,>24,>25,>26,>27,>28,>29,>30,>31,>32,>33%酪氨酸残基的HCDR3。在一些实施方式中,分离的抗体或抗原结合片段包含具有<35,<34,<33,<32,<31,<30,<29,<28,<27,<26,<25,<24,<23,<22,<21,<20,<19,<18,<17,<16,<15,<14<13,<12,<11,<10,<9或<8%酪氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having >8, >9, >10, >11, >12, >13, >14, >15, >16, >17, >18, >19, >20, >21, >22, >23, >24, >25, >26, >27, >28, >29, >30, >31, >32, >33% of tyrosine residues. In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having <35, <34, <33, <32, <31, <30, <29, <28, <27, <26, <25, <24, <23, <22, <21, <20, <19, <18, <17, <16, <15, <14, <13, <12, <11, <10, <9, or <8% of tyrosine residues.
在一些实施方式中,分离的抗体或抗原结合片段包含具有>0且<34%,>1且<34%,>2且<34%,>3且<34%,>4且<34%,>5且<34%,>6且<34%,>7且<34%,>8且<34%,>9且<34%,>10且<34%,>11且<34%,>12且<34%,>13且<34%,>14且<34%,>15且<34%,>16且<34%,>17且<34%,>18且<34%,>19且<34%,>20且<34%,>21且<34%,>22且<34%,>23且<34%,>24且<34%,>25且<34%,>26且<34%,>27且<34%,>28且<34%,>29且<34%or>30且<34%酪氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises fragments having the following characteristics: >0 and <34%, >1 and <34%, >2 and <34%, >3 and <34%, >4 and <34%, >5 and <34%, >6 and <34%, >7 and <34%, >8 and <34%, >9 and <34%, >10 and <34%, >11 and <34%, >12 and <34%, >13 and <34%, >14 and <34%, >15... HCDR3 with tyrosine residues <34%, >16 and <34%, >17 and <34%, >18 and <34%, >19 and <34%, >20 and <34%, >21 and <34%, >22 and <34%, >23 and <34%, >24 and <34%, >25 and <34%, >26 and <34%, >27 and <34%, >28 and <34%, >29 and <34% or >30 and <34%.
在一些实施方式中,分离的抗体或抗原结合片段包含具有>0且<36%,>0且<35%,>0且<34%,>0且<33%,>0且<32%,>0且<31%,>0且<30%,>0且<29%,>0且<28%,>0且<27%,>0且<26%,>0且<25%,>0且<24%,>0且<23%,>0且<22%,>0且<21%,>0且<20%,>0且<19%,>0且<18%,>0且<17%,>0且<16%,or>0且<15%,>0且<14%,>0且<13%,>0且<12%,>0且<11%,>0且<10%,>0且<9%,>0且<8%,>0且<7%,,>0且<6%,>0且<5%酪氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having >0 and <36%, >0 and <35%, >0 and <34%, >0 and <33%, >0 and <32%, >0 and <31%, >0 and <30%, >0 and <29%, >0 and <28%, >0 and <27%, >0 and <26%, >0 and <25%, >0 and <24%, >0 and <23%, >0 and <22%, >0 and <21%, >0 and <20%, >0 and <19%, >0 and <18%, >0 and <17%, >0 and <16%, or >0 and <15%, >0 and <14%, >0 and <13%, >0 and <12%, >0 and <11%, >0 and <10%, >0 and <9%, >0 and <8%, >0 and <7%, >0 and <6%, >0 and <5% tyrosine residues.
带电荷aaCharged aa
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有47%、39%、31%、28%、27%、25%、23%、20%、18%、17%、16%、15%、9%或0%带电氨基酸的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且<47%、(b)>22且<50%、(c)>10且<34%、或(d)>15且<47%带电氨基酸的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 47%, 39%, 31%, 28%, 27%, 25%, 23%, 20%, 18%, 17%, 16%, 15%, 9%, or 0% charged amino acids. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and <47%, (b) >22 and <50%, (c) >10 and <34%, or (d) >15 and <47% charged amino acids.
正电荷aapositive charge aa
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有31%、23%、18%、15%、10%、8%、7%或0%带正电荷的氨基酸的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且<32%、(b)>8且<30%、或(c)>10且<37%带正电荷氨基酸的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 31%, 23%, 18%, 15%, 10%, 8%, 7%, or 0% of positively charged amino acids. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and <32%, (b) >8 and <30%, or (c) >10 and <37% of positively charged amino acids.
负电荷aanegative charge aa
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有25%、17%、15%、11%、10%、9%、8%、7%或0%带负电荷的氨基酸的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且<26%,(b)≥7且<16%,或(c)>7且<14%的带负电荷氨基酸的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 25%, 17%, 15%, 11%, 10%, 9%, 8%, 7%, or 0% of negatively charged amino acids. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and <26%, (b) ≥7 and <16%, or (c) >7 and <14% of negatively charged amino acids.
组氨酸(H)Histidine (H)
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有0%、3%、7%、8%、10%或15%组氨酸残基的HCDR3。优选地,分离的抗体或抗原结合片段包含具有至少一个组氨酸残基的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且≤16%、(b)≥2且≤20%或(c)≥7且≤20%组氨酸残基的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 0%, 3%, 7%, 8%, 10%, or 15% histidine residues. Preferably, the isolated antibody or antigen-binding fragment comprises HCDR3 having at least one histidine residue. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and ≤16%, (b) ≥2 and ≤20%, or (c) ≥7 and ≤20% histidine residues.
在一些实施方式中,分离的抗体或抗原结合片段包含具有≥0,>0,>1,>2,>3,>4,>5,>6,>7,>8,>9,>10,>11,>12,>13,>14,>15,>16,>17,>18,>19,>20%组氨酸残基的HCDR3。在一些实施方式中,分离的抗体或抗原结合片段包含具有<20,<19,<18,<17,<16,<15,<14<13,<12,<11,<10,<9,<8,<7,<6,<5,<4,<3,<2或<1%组氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having ≥0, >0, >1, >2, >3, >4, >5, >6, >7, >8, >9, >10, >11, >12, >13, >14, >15, >16, >17, >18, >19, >20% histidine residues. In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having <20, <19, <18, <17, <16, <15, <14<13, <12, <11, <10, <9, <8, <7, <6, <5, <4, <3, <2, or <1% histidine residues.
在一些实施方式中,分离的抗体或抗原结合片段包含具有>0且<24%,>1且<24%,>2且<24%,>3且<24%,>4且<24%,>5且<24%,>6且<24%,>7且<24%,>8且<24%,>9且<24%,>10且<24%,>11且<24%,>12且<24%,>13且<24%,>14且<24%,>15且<24%,>16且<24%,>17且<24%,>18且<24%,>19且<24%,>20且<24%,>21且<24%,>22且<24%or>23且<24%组氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having >0 and <24%, >1 and <24%, >2 and <24%, >3 and <24%, >4 and <24%, >5 and <24%, >6 and <24%, >7 and <24%, >8 and <24%, >9 and <24%, >10 and <24%, >11 and <24%, >12 and <24%, >13 and <24%, >14 and <24%, >15 and <24%, >16 and <24%, >17 and <24%, >18 and <24%, >19 and <24%, >20 and <24%, >21 and <24%, >22 and <24% or >23 and <24% histidine residues.
在一些实施方式中,分离的抗体或抗原结合片段包含具>0且<24%,>0且<23%,>0且<22%,>0且<21%,>0且<20%,>0且<19%,>0且<18%,>0且<17%,>0且<16%,or>0且<15%,>0且<14%,>0且<13%,>0且<12%,>0且<11%,>0且<10%,>0且<9%,>0且<8%,>0且<7%,>0且<6%,>0且<5%,>0且<4%,>0且<3%,>0且<2%or>0且<1%组氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment contains HCDR3 having >0 and <24%, >0 and <23%, >0 and <22%, >0 and <21%, >0 and <20%, >0 and <19%, >0 and <18%, >0 and <17%, >0 and <16%, or >0 and <15%, >0 and <14%, >0 and <13%, >0 and <12%, >0 and <11%, >0 and <10%, >0 and <9%, >0 and <8%, >0 and <7%, >0 and <6%, >0 and <5%, >0 and <4%, >0 and <3%, >0 and <2% or >0 and <1% histidine residues.
组氨酸+酪氨酸Histidine + Tyrosine
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有42%、38%、33%、31%、30%、24%、23%、18%、15%、10%、9%或0%组氨酸和酪氨酸残基总数的HCDR3。优选地,分离的抗体或抗原结合片段包含具有至少一个组氨酸残基的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>v且≤42%、(b)≥10且≤42%或(c)≥36且≤43%的组氨酸和酪氨酸残基总数的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having a total histidine and tyrosine residue content of 42%, 38%, 33%, 31%, 30%, 24%, 23%, 18%, 15%, 10%, 9%, or 0%. Preferably, the isolated antibody or antigen-binding fragment comprises HCDR3 having at least one histidine residue. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having a total histidine and tyrosine residue content of (a) > 42%, (b) ≥ 10% and ≤ 42%, or (c) ≥ 36% and ≤ 43%.
精氨酸(R)Arginine (R)
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有0%、7%、8%、10%、15%或18%精氨酸残基的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且≤18%、(b)≥7且≤10%或(c)≥0且≤7%精氨酸残基的HCDR3。In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 0%, 7%, 8%, 10%, 15%, or 18% arginine residues. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and ≤18%, (b) ≥7 and ≤10%, or (c) ≥0 and ≤7% arginine residues.
赖氨酸(K)Lysine (K)
在一些实施方式中,分离的抗体或抗原结合片段包含具有0%至8%赖氨酸残基的HCDR3。在一些实施方式中,分离的抗体或抗原结合片段包含不具有赖氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 0% to 8% lysine residues. In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 without lysine residues.
天冬氨酸(D)Aspartic acid (D)
在一些优选的实施方式中,分离的抗体或抗原结合片段包含具有0%、7%、8%、9%、10%、11%、15%、16%、17%或25%天冬氨酸残基的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含具有(a)>0且≤25%、(b)≥7且≤16%或(c)≥7且≤13%的天冬氨酸残基的HCDR3.In some preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 0%, 7%, 8%, 9%, 10%, 11%, 15%, 16%, 17%, or 25% aspartic acid residues. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having (a) >0 and ≤25%, (b) ≥7 and ≤16%, or (c) ≥7 and ≤13% aspartic acid residues.
谷氨酸(E)Glutamic acid (E)
在一些实施方式中,分离的抗体或抗原结合片段包含具有0%、8%或9%谷氨酸残基的HCDR3。在一些高度优选的实施方式中,分离的抗体或抗原结合片段包含不含谷氨酸残基的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 having 0%, 8%, or 9% glutamate residues. In some highly preferred embodiments, the isolated antibody or antigen-binding fragment comprises HCDR3 without glutamate residues.
长度length
在一些实施方式中,分离的抗体或抗原结合片段包含长度为3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19或20个氨基酸。优选地,分离的抗体或抗原结合片段包含具有10、11、12或13个氨基酸残基或8至13个氨基酸残基长度的HCDR3。In some embodiments, the isolated antibody or antigen-binding fragment comprises 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or 20 amino acids in length. Preferably, the isolated antibody or antigen-binding fragment comprises HCDR3 having 10, 11, 12, or 13 amino acid residues or a length of 8 to 13 amino acid residues.
方面11-阻断/中性CCR8抗体Aspect 11 - Blocking/Neutral CCR8 Antibody
抗体调节CCR8信号传导的方式有多种。例如,抗体可以Antibodies regulate CCR8 signaling in several ways. For example, antibodies can...
a)阻断G蛋白非依赖性信号传导,a) Block G protein-independent signal transduction.
b)阻断G蛋白依赖性信号传到,b) Block G protein-dependent signal transduction,
c)阻断G蛋白依赖性和G蛋白非依赖性信号传导,c) Block both G protein-dependent and G protein-independent signal transduction.
d)增加G蛋白非依赖性信号传导,d) Increase G protein-independent signaling.
e)增加G蛋白依赖性信号传导,e) Increase G protein-dependent signaling,
f)增加G蛋白依赖性和G蛋白非依赖性信号传导。f) Increase both G protein-dependent and G protein-independent signaling.
根据第十一方面,其可以与第六、第七、第八、第九和/或第十方面相同或不同,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段至少部分调节CCR8信号传导。According to the eleventh aspect, which may be the same as or different from the sixth, seventh, eighth, ninth and/or tenth aspects, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment at least partially modulates CCR8 signaling.
对于CCR8,G蛋白非依赖性信号传导通路是β-arrestin信号传导(实施例10.4.1)、磷酸Erk1/2信号传导(Erk1/2的磷酸化)和磷酸Akt信号传导(AKT的磷酸化)(实施例10.4.2)。可以根据对这三种G蛋白非依赖性信号传导通路的影响来定义拮抗剂或激动剂的其他亚型。For CCR8, the G protein-independent signaling pathways are β-arrestin signaling (Example 10.4.1), Erk1/2 phosphate signaling (phosphorylation of Erk1/2), and Akt phosphate signaling (phosphorylation of AKT) (Example 10.4.2). Other subtypes of antagonists or agonists can be defined based on their effects on these three G protein-independent signaling pathways.
根据第11个方面的一些第一实施方式,抗体或抗原结合片段According to some first embodiments of aspect 11, an antibody or antigen-binding fragment
a)不阻断CCL1诱导的β-arrestin信号传导和/或a) Does not block CCL1-induced β-arrestin signaling and/or
b)不诱导ERK1/2磷酸化和/或b) Does not induce ERK1/2 phosphorylation and/or
c)不诱导AKT磷酸化。c) Does not induce AKT phosphorylation.
实施例10.4.1显示现有技术抗体433H和L268G8有效阻断CCL1诱导的β-arrestin信号传导,例如IC50值低于20nM(参见表10.4.1.1),而本发明的抗体如TPP-23411无法确定IC50值。Example 10.4.1 shows that prior art antibodies 433H and L268G8 effectively block CCL1-induced β-arrestin signaling, for example, with IC50 values below 20 nM (see Table 10.4.1.1), while the IC50 value of the antibodies of the present invention, such as TPP-23411, cannot be determined.
根据第十一方面的第一实施方式的一些实施方式A,抗体或抗原结合片段不阻断CCL1诱导的β-arrestin信号传导。如有疑问,如果IC50低于100nM,抗体阻断CCL1诱导的β-arrestin信号传导。如有疑问,如果IC50≥100nM,或者如果无法使用所述测定系统确定IC50,则抗体不会阻断CCL1诱导的β-arrestin信号传导。如第12方面所述,CCL1诱导的β-arrestin信号传导与受体内化有关。According to some embodiments A of the first embodiment of the eleventh aspect, the antibody or antigen-binding fragment does not block CCL1-induced β-arrestin signaling. In doubt, if the IC50 is less than 100 nM, the antibody blocks CCL1-induced β-arrestin signaling. In doubt, if the IC50 is ≥ 100 nM, or if the IC50 cannot be determined using the assay system, the antibody does not block CCL1-induced β-arrestin signaling. As described in the 12th aspect, CCL1-induced β-arrestin signaling is related to receptor internalization.
实施例10.4.2、图27、28显示现有技术抗体在表达人CCR8的CHO细胞或人激活Tregs中诱导Erk1/2的磷酸化,例如15分钟后,至少增加1.5倍。相反,本发明的抗体TPP-23411没有诱导Erk1/2的显著磷酸化。Examples 10.4.2 and Figures 27 and 28 show that prior art antibodies induce phosphorylation of Erk1/2 in CHO cells expressing human CCR8 or in human activated Tregs, for example, by at least 1.5-fold after 15 minutes. In contrast, the antibody TPP-23411 of the present invention does not induce significant phosphorylation of Erk1/2.
根据第十一方面的第一实施方式的一些实施方式B,抗体或抗原结合片段不诱导ERK1/2磷酸化。如有疑问,如果-使用本文所述的测定-可以检测到Erk1/2磷酸化水平比对照至少增加1.5倍,则抗体诱导Erk1/2的磷酸化。如有疑问,如果未检测到Erk1/2的磷酸化水平显著增加或增加低于对照的1.5倍,则抗体不诱导Erk1/2的磷酸化。According to some embodiments B of the first embodiment of the eleventh aspect, the antibody or antigen-binding fragment does not induce ERK1/2 phosphorylation. In doubt, if—using the assay described herein—an increase in Erk1/2 phosphorylation level of at least 1.5 times compared to the control can be detected, then the antibody induces Erk1/2 phosphorylation. In doubt, if no significant increase in Erk1/2 phosphorylation level is detected, or if the increase is less than 1.5 times that of the control, then the antibody does not induce Erk1/2 phosphorylation.
实施例10.4.2,图30显示现有技术抗体诱导AKT的磷酸化,例如15分钟后至少增加1.5倍。相反,本发明的抗体TPP-23411没有诱导AKT的显著磷酸化。Example 10.4.2, Figure 30 shows that prior art antibodies induce phosphorylation of AKT, for example, by at least 1.5-fold after 15 minutes. In contrast, the antibody TPP-23411 of the present invention does not induce significant phosphorylation of AKT.
根据第11方面的第一实施方式的一些实施方式C,抗体或抗原结合片段不诱导AKT磷酸化。如有疑问,如果-使用本文所述的测定-可以检测到AKT磷酸化水平比对照增加至少1.5倍,则抗体诱导AKT的磷酸化。如有疑问,如果未检测到AKT磷酸化水平显著增加或增加低于对照的1.5倍,则抗体不诱导AKT磷酸化。According to some embodiments C of the first embodiment of aspect 11, the antibody or antigen-binding fragment does not induce AKT phosphorylation. In doubt, if an increase in AKT phosphorylation level of at least 1.5 times compared to the control can be detected using the assay described herein, then the antibody induces AKT phosphorylation. In doubt, if no significant increase in AKT phosphorylation level is detected or the increase is less than 1.5 times that of the control, then the antibody does not induce AKT phosphorylation.
不显示诱导G蛋白非依赖性信号通路(如AKT或ERK1/2磷酸化)的抗体或片段被认为在治疗中具有优势,因为诱导G蛋白依赖性信号通路可能导致不需要的作用和副作用。Antibodies or fragments that do not induce G protein-independent signaling pathways (such as AKT or ERK1/2 phosphorylation) are considered to have an advantage in treatment because inducing G protein-dependent signaling pathways may lead to unwanted effects and side effects.
为了分析G蛋白依赖性信号传导,本领域已知的和本文描述的Ca通量测定可以用作读数。大多数测试的本发明抗体被发现是完全有效的G蛋白依赖性Ca信号转导的拮抗剂,然而,与现有技术抗体相比,可以确定IC50的差异。To analyze G protein-dependent signaling, known and described Ca flux assays in the art can be used as reads. Most of the antibodies tested in this invention have been found to be fully effective antagonists of G protein-dependent Ca signaling; however, differences in IC50 can be identified compared to prior art antibodies.
实施例10.4.3表明,几种测试的抗CCR8抗体阻断了CCL1诱导的G蛋白依赖性Ca信号传导,例如IC50值为低nM甚至亚nM范围内。Example 10.4.3 shows that several tested anti-CCR8 antibodies blocked CCL1-induced G protein-dependent Ca signaling, for example, with IC50 values in the low nM or even sub-nM range.
根据第十一方面的一些第二实施方式,其可以与第一实施方式相同或不同,抗体或抗原结合片段阻断CCL1诱导的钙信号传导。在这些实施方式的一些优选实施方式中,抗体或抗原结合片段阻断CCL1诱导的钙信号传导,例如IC50<1nM、<0.5nM或<0.01nM。According to some second embodiments of the eleventh aspect, which may be the same as or different from the first embodiment, the antibody or antigen-binding fragment blocks CCL1-induced calcium signaling. In some preferred embodiments of these embodiments, the antibody or antigen-binding fragment blocks CCL1-induced calcium signaling, for example, IC50 < 1 nM, < 0.5 nM, or < 0.01 nM.
根据第十一方面的一些第三实施方式,其可以与第一实施方式相同或不同,抗体或抗原结合片段不阻断CCL1诱导的G蛋白依赖性钙信号传导。According to some third embodiments of the eleventh aspect, which may be the same as or different from the first embodiment, the antibody or antigen-binding fragment does not block CCL1-induced G protein-dependent calcium signaling.
方面12-无和/或低内化CCR8抗体Aspect 12 - No and/or low internalization of CCR8 antibodies
抗CCR8抗体可以是非内化、低内化、中等内化或高内化抗体或抗原结合片段。Anti-CCR8 antibodies can be non-internalized, low-internalized, moderately internalized, or highly internalized antibodies or antigen-binding fragments.
根据第十二方面,其可以与第六、第七、第八、第九、第十和/或第十一方面相同或不同,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段是非内化或低内化抗体或抗原结合片段。According to the twelfth aspect, which may be the same as or different from the sixth, seventh, eighth, ninth, tenth and/or eleventh aspects, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment is a non-internalized or low-internalized antibody or antigen-binding fragment.
取决于抗体、片段或缀合物的特定作用模式,可能需要或必须避免内化到细胞中,如本文别处所讨论的。第12方面的抗体特别适用于ADCC/ADCP方法,或依赖抗体或抗原结合片段募集效应细胞的任何其他作用模式。Depending on the specific mode of action of the antibody, fragment, or conjugate, internalization into the cell may be necessary or necessary to avoid, as discussed elsewhere in this document. Antibodies in aspect 12 are particularly suitable for ADCC/ADCP methods, or any other mode of action that relies on the recruitment of effector cells by antibody or antigen-binding fragments.
因为过度表达可能影响内化行为并且不太适合在治疗环境中模拟内化,所以内化优选地使用具有靶标内源表达的模型细胞系来确定。当靶标是人CCR8时,内源性表达靶标的细胞优选是HuT78。当靶标是鼠CCR8时,内源性表达靶标的细胞优选是鼠BW5147.3。HuT78和mBW5147.3可以从ATCC获得。Because overexpression can affect internalization behavior and is not well-suited for simulating internalization in a therapeutic setting, internalization is preferably determined using model cell lines with endogenous expression of the target. When the target is human CCR8, HuT78 cells are preferred for endogenous target expression. When the target is mouse CCR8, mouse BW5147.3 cells are preferred. Both HuT78 and mBW5147.3 are available from ATCC.
虽然所有现有技术的抗体都容易内化到具有内源靶标表达的细胞中,如实施例10.5所示,但测试的抗体TPP-21360、TPP-21047(数据未显示)和TPP-23411以及根据本发明的各种其他抗体没有显著地内化。While all prior art antibodies readily internalize into cells expressing endogenous targets, as shown in Example 10.5, the tested antibodies TPP-21360, TPP-21047 (data not shown), and TPP-23411, as well as various other antibodies according to the invention, did not internalize significantly.
例如,可以在一个时间范围内或针对特定时间点确定内化。优选地,可以在内源性表达靶标的细胞中在15分钟、30分钟、1小时、2小时、3小时、6小时、12小时、24小时或48小时后测定内化。For example, internalization can be determined over a time span or at a specific time point. Preferably, internalization can be determined in cells that endogenously express the target at 15 minutes, 30 minutes, 1 hour, 2 hours, 3 hours, 6 hours, 12 hours, 24 hours, or 48 hours.
根据第十二个方面的一些第一实施方式,抗体或抗原结合片段的特征在于以低于同种型对照地内化的1.5、2、3、4、5、6、7或10倍内化到具有内源靶标表达的细胞中。可以如本领域已知的那样选择抗体的同种型对照以尽可能接近地匹配抗体的同种型,但不结合靶标。According to some first embodiments of the twelfth aspect, the antibody or antigen-binding fragment is characterized by being internalized into cells expressing an endogenous target at a rate of 1.5, 2, 3, 4, 5, 6, 7, or 10 times lower than that internalized in an isotype control. An isotype control of the antibody can be selected, as is known in the art, to match the antibody isotype as closely as possible, but without binding to the target.
根据这些实施方式中的一些,抗体或抗原结合片段的特征在于以低于同种型对照的内化的150%、175%、200%、300%、400%或500%内化到具有内源靶标表达的细胞中,例如15分钟、30分钟、1小时、2小时、3小时、6小时、12小时、24小时或48小时后,优选地,其中具有内源靶标表达的细胞是HuT78淋巴瘤细胞。According to some of these embodiments, the antibody or antigen-binding fragment is characterized by being internalized into cells expressing the endogenous target at a rate of 150%, 175%, 200%, 300%, 400%, or 500% lower than that of the isotype control, for example, after 15 minutes, 30 minutes, 1 hour, 2 hours, 3 hours, 6 hours, 12 hours, 24 hours, or 48 hours, preferably, wherein the cells expressing the endogenous target are HuT78 lymphoma cells.
根据这些实施方式的一些优选的实施方式,抗体或抗原结合片段具有与同种型对照的内化率处于相同数量级的内化率。According to some preferred embodiments of these implementations, the antibody or antigen-binding fragment has an internalization rate that is on the same order of magnitude as that of the isotype control.
根据第十二方面的一些第二实施方式,其可与第一实施方式相同或不同,抗体或抗原结合片段特异性结合人CCR8并且其特征在于在内源性表达靶标地细胞中,直到抗体、片段或缀合物的量的一半已被内化的时间>2小时,优选地>4、>5、>6、>7、>8、>9、>10、>11、>12、>13、>14、>15、>16,>17、>18、>19、>20、>21、>22、>23、>24、>26、>28、>30或>48小时,或者无法完全确定这样的时间,优选地,其中内源性表达靶标的细胞是HuT78淋巴瘤细胞。例如,抗CCR8抗体的内化率低于抗体433H和L263G8(BioLegendCat.No.360602)。According to some second embodiments of the twelfth aspect, which may be the same as or different from the first embodiment, the antibody or antigen-binding fragment specifically binds to human CCR8 and is characterized in that, in cells endogenously expressing the target, the time until half of the amount of antibody, fragment, or conjugate has been internalized is >2 hours, preferably >4, >5, >6, >7, >8, >9, >10, >11, >12, >13, >14, >15, >16, >17, >18, >19, >20, >21, >22, >23, >24, >26, >28, >30, or >48 hours, or such a time cannot be completely determined. Preferably, the cells endogenously expressing the target are HuT78 lymphoma cells. For example, the internalization rate of anti-CCR8 antibodies is lower than that of antibodies 433H and L263G8 (BioLegendCat.No.360602).
根据第十二方面的一些第三实施方式,其可以与第一或第二实施方式相同或不同,抗体或抗原结合片段特异性结合鼠CCR8并且在内源性表达靶标的细胞中具有比抗体SA214G2更低的内化率,优选地,其中内源性表达靶标的细胞是鼠淋巴瘤细胞系BW5147.3。According to some third embodiments of the twelfth aspect, which may be the same as or different from the first or second embodiments, the antibody or antigen-binding fragment specifically binds to mouse CCR8 and has a lower internalization rate than antibody SA214G2 in cells that endogenously express the target, preferably wherein the cells that endogenously express the target are mouse lymphoma cell line BW5147.3.
所提供的分离的抗体或抗原结合片段还优选地是根据方面7、8、9、10、11、13、14、15、16、17或18中任一方面或其组合的抗体。The provided isolated antibody or antigen-binding fragment is preferably an antibody according to any one or a combination of aspects 7, 8, 9, 10, 11, 13, 14, 15, 16, 17 or 18.
方面13-ADCC/ADCP诱导CCR8抗体Aspect 13-ADCC/ADCP induces CCR8 antibody
为了诱导CCR8表达细胞(如激活的Tregs)的杀伤,可以设想多种作用模式。一种作用模式是将靶向CCR8的抗体与药物缀合成抗体药物缀合物(ADC)的形式。其他可能的作用模式是ADCC、CDC和ADCP。对于ADCC、CDC和ADCP,涉及两步机制:一方面,需要抗体或片段有效结合靶细胞,例如,通过CCR8的Treg,另一方面,抗体的FC部分(或可以与抗体或片段缀合的替代结合部分,如本文其他地方所述)必须结合效应细胞,然后介导靶细胞的杀伤。对于ADCP,结合作为效应细胞的巨噬细胞通常通过抗体FC部分与巨噬细胞表达的FcγRIIa(CD32a)的相互作用发生。相反,ADCC是通过抗体或片段与FcγRIIIa的相互作用介导的。在人类中,FcγRIII以两种不同的形式存在:FcγRIIIa(CD16a)和FcγRIIIb(CD16b)。FcγRIIIa作为跨膜受体在肥大细胞、巨噬细胞和自然杀伤细胞上表达,而FcγRIIIb仅在中性粒细胞上表达。这些受体与IgG抗体的Fc部分结合,然后激活由人效应细胞介导的抗体依赖性细胞介导的细胞毒性(ADCC)。To induce the killing of CCR8-expressing cells (such as activated Tregs), several modes of action can be envisioned. One mode of action involves conjugating an antibody targeting CCR8 with a drug to form an antibody-drug conjugate (ADC). Other possible modes of action are ADCC, CDC, and ADCP. For ADCC, CDC, and ADCP, a two-step mechanism is involved: on the one hand, the antibody or fragment needs to effectively bind to the target cell, for example, via Tregs of CCR8; on the other hand, the FC portion of the antibody (or an alternative binding portion that can be conjugated with the antibody or fragment, as described elsewhere in this document) must bind to the effector cell, thus mediating the killing of the target cell. For ADCP, binding to macrophages as effector cells typically occurs through the interaction of the antibody's FC portion with FcγRIIa (CD32a) expressed by macrophages. Conversely, ADCC is mediated through the interaction of an antibody or fragment with FcγRIIIa. In humans, FcγRIII exists in two distinct forms: FcγRIIIa (CD16a) and FcγRIIIb (CD16b). FcγRIIIa, as a transmembrane receptor, is expressed on mast cells, macrophages, and natural killer cells, while FcγRIIIb is expressed only on neutrophils. These receptors bind to the Fc moiety of IgG antibodies, thereby activating antibody-dependent cell-mediated cytotoxicity (ADCC) mediated by human effector cells.
如有疑问,在分析ADCC和/或ADCP诱导时,需要至少80%,优选地至少85%的靶细胞显示CCR8表达。If in doubt, when analyzing ADCC and/or ADCP induction, at least 80%, preferably at least 85%, of the target cells should show CCR8 expression.
根据第13方面,其可与第六、第七、第八、第九、第十、第十一和/或第十二方面可以相同或不同,提供了一种特异性结合至CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段诱导ADCC和/或ADCP。According to aspect 13, which may be the same as or different from aspects 6, 7, 8, 9, 10, 11 and/or 12, a separate antibody or antigen-binding fragment thereof specifically binds to CCR8, wherein the antibody or antigen-binding fragment induces ADCC and/or ADCP.
例如,提供了特异性结合CCR8的分离的抗体或其抗原结合片段,其中该抗体或抗原结合片段是非岩藻糖基化的并且a)通过人效应细胞例如人NK细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和b)通过人效应细胞例如人巨噬细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP),优选地,其中最大的ADCC和ADCP诱导的表达人CCR8的靶细胞的体外耗竭至少为30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%或99%。如有疑问,应使用至少85%的细胞表达CCR8的靶细胞来确定ADCC和ADCP。For example, isolated antibodies or antigen-binding fragments thereof that specifically bind to CCR8 are provided, wherein the antibody or antigen-binding fragment is non-fucosylated and induces antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 via human effector cells such as human NK cells, and b) induces antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 via human effector cells such as human macrophages. Preferably, the maximum ADCC and ADCP induce in vitro depletion of target cells expressing human CCR8 at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99%. In case of doubt, target cells with at least 85% CCR8 expression should be used to determine ADCC and ADCP.
在第十三方面的一些优选实施方式中,抗体或抗原结合片段是非岩藻糖基化的。非岩藻糖基化抗体是经过工程化的抗体,使得抗体Fc区中的寡糖不含任何岩藻糖单元。非岩藻糖基化抗体可以如本领域已知的那样获得,例如如实施例10.3中所述。实施例10.3.2证明了本发明抗体的非岩藻糖基化形式与FcγRIIIa的结合得到改善。与FcγRIIa的结合同样略有改善。无岩藻糖基化还增加了与食蟹猴FcγRIII的结合,参见表10.3.2.1。In some preferred embodiments of aspect thirteen, the antibody or antigen-binding fragment is non-fucosylated. The non-fucosylated antibody is an engineered antibody such that the oligosaccharide in the Fc region of the antibody does not contain any fucosylate units. Non-fucosylated antibodies can be obtained as is known in the art, for example as described in Example 10.3. Example 10.3.2 demonstrates improved binding to FcγRIIIa in the non-fucosylated form of the antibody of the present invention. Binding to FcγRIIa is also slightly improved. Non-fucosylation also increases binding to cynomolgus monkey FcγRIII, see Table 10.3.2.1.
ADCCADCC
在第13方面的一些第一实施方案A中,抗体或抗原结合片段以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a)。In some first embodiments A of aspect 13, the antibody or antigen-binding fragment binds to human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) of less than 530 nM, 500 nM, 450 nM, 400 nM, 300 nM or 200 nM.
在第13方面的一些第一实施方式B中,其可以与第一实施方式A相同或不同,抗体或抗原结合片段通过人效应细胞例如人NK细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC)。可以用本领域已知的测定分析ADCC诱导,例如根据实施例10.3.3ff所述。In some first embodiments B of aspect 13, which may be the same as or different from first embodiment A, an antibody or antigen-binding fragment induces antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 via human effector cells, such as human NK cells. ADCC induction can be analyzed using assays known in the art, for example, as described in Example 10.3.3ff.
在第13方面的一些第一实施方式C中,其可与第一实施方式A或B相同或不同,ADCC诱导的激活的人调节性T细胞的最大耗竭至少为25%、30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%、98%或99%,优选地其中至少85%的激活的人调节性T细胞具有CCR8表达,参见表10.3.3.1.2和表10.3.3.1.3。In some first embodiments C of aspect 13, which may be the same as or different from first embodiments A or B, the maximum exhaustion of ADCC-induced activated human regulatory T cells is at least 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%, preferably wherein at least 85% of the activated human regulatory T cells express CCR8, see Tables 10.3.3.1.2 and 10.3.3.1.3.
在第13方面的一些第一实施方式D中,其可与第一实施方式A、B或C相同或不同,ADCC诱导的激活人调节性T细胞耗竭的EC50低于500pM、400pM、300pM、200pM、100pM、50pM、25pM、20pM、12.5pM、10pM、5pM或2.5pM。优选地,至少85%的激活的人调节性T细胞具有CCR8表达。In some first embodiments D of aspect 13, which may be the same as or different from first embodiments A, B, or C, the EC50 of ADCC-induced activated human regulatory T cells is below 500 pM, 400 pM, 300 pM, 200 pM, 100 pM, 50 pM, 25 pM, 20 pM, 12.5 pM, 10 pM, 5 pM, or 2.5 pM. Preferably, at least 85% of the activated human regulatory T cells express CCR8.
ADCPADCP
在第13方面的一些第二实施方式A中,其可与第一实施方式A、B、C和/或D相同或不同,抗体或抗原结合片段以解离常数(KD)低于30μM、20μM、10μM、5μM或1μM结合人FcγRIIA。In some second embodiments A of aspect 13, which may be the same as or different from first embodiments A, B, C and/or D, the antibody or antigen-binding fragment binds to human FcγRIIA with a dissociation constant (KD) of less than 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
在第13方面的一些第二实施方式B中,其可与第一实施方式A、B、C和/或D相同,并且可与第二实施方式A相同,抗体或抗原结合片段通过人效应细胞例如人巨噬细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP)。例如,人巨噬细胞可以是M2c或M1巨噬细胞。In some second embodiments B of aspect 13, which may be identical to first embodiments A, B, C and/or D, and may be identical to second embodiment A, the antibody or antigen-binding fragment induces antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 via human effector cells, such as human macrophages. For example, the human macrophages may be M2c or M1 macrophages.
在第13方面的一些第二实施方式C中,其可与第一实施方式A、B、C和/或D相同,并且可与第二实施方式A和/或B相同,ADCP诱导的激活的人调节性T细胞的最大耗竭至少为5%、10%、15%、20%、25%、30%、40%或50%。In some second embodiments C of aspect 13, which may be the same as first embodiments A, B, C and/or D, and may be the same as second embodiments A and/or B, the maximum exhaustion of ADCP-induced activated human regulatory T cells is at least 5%, 10%, 15%, 20%, 25%, 30%, 40% or 50%.
在第13方面的一些第二实施方式D中,其可与第一实施方式A、B、C和/或D相同,并且可与第二实施方式A、B和/或C相同,ADCP诱导的激活的人调节性T细胞的诱导耗竭低于1500pM、1000pM、500pM、250pM、200pM、150pM、100pM、75pM、50pM、25pM或10pM。In some second embodiments D of aspect 13, which may be the same as first embodiments A, B, C and/or D, and may be the same as second embodiments A, B and/or C, the ADCP-induced activation of human regulatory T cells exhaustion is below 1500 pM, 1000 pM, 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM, 25 pM or 10 pM.
在一些优选的实施方式中,提供了特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段In some preferred embodiments, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment
a)以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a),和/或a) Binding to human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) below 530 nM, 500 nM, 450 nM, 400 nM, 300 nM, or 200 nM, and/or
b)以低于30μM、20μM、10μM、5μM或1μM的解离常数(KD)结合人FcγRIIA(CD32a)。b) Bind human FcγRIIA (CD32a) with a dissociation constant (KD) of less than 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
在一些优选的实施方式中,提供了特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段In some preferred embodiments, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment
a)通过人效应细胞(例如人NK细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和/或a) Inducing antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 via human effector cells (e.g., human NK cells), and/or
b)通过人效应细胞(如人巨噬细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP)。b) Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 using human effector cells (such as human macrophages).
在一些优选的实施方式中,提供了一种分离的抗体或其抗原结合片段,其特异性结合CCR8,其中In some preferred embodiments, an isolated antibody or antigen-binding fragment thereof is provided that specifically binds to CCR8, wherein
a)ADCC诱导的激活人调节性T细胞的最大耗竭至少为30%、40%、50%、60%、70%、80%、90%、95%、98%或99%,和/或a) The maximum exhaustion of ADCC-induced activated human regulatory T cells is at least 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%, and/or
b)ADCP诱导的激活人调节性T细胞的最大耗竭至少为5%、10%、15%、20%、25%、30%、40%或50%,和/或b) The maximum exhaustion of ADCP-induced activated human regulatory T cells is at least 5%, 10%, 15%, 20%, 25%, 30%, 40%, or 50%, and/or
c)体外或受试者体内肿瘤内调节性T细胞的最大耗竭至少为50%、60%、70%、80%、90%、95%或99%。c) The maximum depletion of regulatory T cells within the tumor, either in vitro or in the subject, is at least 50%, 60%, 70%, 80%, 90%, 95%, or 99%.
在一些优选的实施方式中,提供了一种分离的抗体或其抗原结合片段,其特异性结合CCR8,其中In some preferred embodiments, an isolated antibody or antigen-binding fragment thereof is provided that specifically binds to CCR8, wherein
a)ADCC诱导的激活的人调节性T细胞的耗竭的EC50低于200pM、100pM、50pM、25pM、12.5pM、10pM或5pM和/或a) ADCC-induced depletion of activated human regulatory T cells with EC50 values below 200 pM, 100 pM, 50 pM, 25 pM, 12.5 pM, 10 pM, or 5 pM and/or
b)ADCP诱导的激活的人调节性T细胞耗竭的EC50低于500pM、250pM、200pM、150pM、100pM、75pM、50pM或25pM。b) ADCP-induced activated human regulatory T cells with depleted EC50 below 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM, or 25 pM.
所提供的分离的抗体或抗原结合片段还优选地是根据方面14、15、16、17或18或其组合中任一方面的抗体。The provided isolated antibody or antigen-binding fragment is preferably an antibody according to any one of aspects 14, 15, 16, 17 or 18 or a combination thereof.
方面14-TREG调节性CCR8抗体Aspect 14-TREG regulatory CCR8 antibody
根据本发明的抗体的体内治疗效果显示在实施例12ff。抗体调节若干免疫细胞群的绝对和相对数量的能力是通过靶结合特性和FC受体相互作用的组合在结构上实现的,例如如根据第7、第10、第12和/或第13方面或其组合所描述的。The in vivo therapeutic effects of the antibody according to the invention are shown in Example 12ff. The ability of the antibody to regulate the absolute and relative numbers of several immune cell populations is structurally achieved through a combination of target-binding properties and FC receptor interactions, for example as described according to aspects 7, 10, 12 and/or 13 or combinations thereof.
根据第十四方面,其可与第六、第七、第八、第九、第十、第十一、第十二和/或第十三方面相同或不同,提供了一种特异性结合CCR8分离的抗体或其抗原结合片段,其中抗体或抗原结合片段耗尽激活的调节性T细胞,优选地肿瘤内Treg。实施例12.1.1显示了在各种小鼠模型中用本发明的抗体获得的高水平的T reg消耗,其中替代抗体的特征在于与提供的抗人CCR8抗体相当的功能特征。有趣的是,在Treg耗竭至少50%的那些例子中观察到更好的治疗反应。Treg耗竭可在体外或体内测量。如本领域技术人员所理解的,Treg耗尽可以是暂时耗尽。例如,可以在治疗后24、48或72小时分析Treg耗竭。According to aspect fourteen, which may be the same as or different from aspects six, seven, eight, nine, ten, eleven, twelfth, and/or thirteen, a specific antibody or antigen-binding fragment thereof that binds to CCR8 is provided, wherein the antibody or antigen-binding fragment depletes activated regulatory T cells, preferably intratumoral Tregs. Example 12.1.1 shows high levels of Treg depletion obtained with the antibody of the present invention in various mouse models, wherein the alternative antibody is characterized by functional features equivalent to the provided anti-human CCR8 antibody. Interestingly, better treatment responses were observed in those examples where Treg depletion was at least 50%. Treg depletion can be measured in vitro or in vivo. As will be understood by those skilled in the art, Treg depletion can be temporary. For example, Treg depletion can be analyzed at 24, 48, or 72 hours after treatment.
根据第14方面的一些第一实施方式,抗体或抗原结合片段的有效剂量的特征在于体外或受试者中激活或肿瘤内调节性T细胞的最大耗竭至少45%,50%、55%、60%、70%、80%、90%、95%或99%。According to some first embodiments of aspect 14, an effective dose of antibody or antigen-binding fragment is characterized by a maximum depletion of at least 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99% of the maximum depletion of activated or intratumoral regulatory T cells in vitro or in a subject.
可以如本领域已知的那样进行体外或体内测定。体内测定可如实施例12ff所述进行。合适的受试者包括例如人和非人,例如小鼠(例如CT26模型或EMT-6模型)、啮齿动物或食蟹猴。In vitro or in vivo assays can be performed as known in the art. In vivo assays can be performed as described in Example 12ff. Suitable subjects include, for example, humans and non-humans, such as mice (e.g., CT26 or EMT-6 models), rodents, or cynomolgus monkeys.
根据第14方面的一些第二实施方式,其可与第一实施方式相同或不同,抗体或抗原结合片段的有效剂量在体外或在受试者中减少激活的或肿瘤内调节性T细胞的数量至低于55%、50%、40%、30%、25%、20%、10%、5%或1%。减少可是暂时的减少。例如,不受理论的束缚,随后可以补充肿瘤内Tregs库。According to some second embodiments of aspect 14, which may be the same as or different from the first embodiment, an effective dose of the antibody or antigen-binding fragment reduces the number of activated or intratumoral regulatory T cells to less than 55%, 50%, 40%, 30%, 25%, 20%, 10%, 5%, or 1% in vitro or in a subject. The reduction may be temporary. For example, without being bound by theory, the intratumoral Treg pool may subsequently be replenished.
根据第14方面的一些第三实施方式,其可与第一和/或第二实施方式相同或不同,有效剂量的抗体或抗原结合片段在体外或受试者中增加肿瘤内CD8+T细胞与肿瘤内Tregs的比率至至少5、10、15、20、25、30、40、50、60、70、80、90、100、150、200或更高。增加可是暂时的增加。According to some third embodiments of aspect 14, which may be the same as or different from the first and/or second embodiments, an effective dose of antibody or antigen-binding fragment increases the ratio of intratumoral CD8+ T cells to intratumoral Tregs to at least 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200 or higher in vitro or in a subject. The increase may be temporary.
根据第十四方面的一些第四实施方式,其可以与第一、第二和/或第三实施方式相同或不同,有效剂量的抗体或抗原结合片段在体外或受试者中降低肿瘤内CD4+T细胞中的调节性T细胞的百分比至<30%、<20%、<10%或<5%。减少可是暂时的减少。According to some fourth embodiments of the fourteenth aspect, which may be the same as or different from the first, second, and/or third embodiments, an effective dose of the antibody or antigen-binding fragment reduces the percentage of regulatory T cells in intratumoral CD4+ T cells to <30%, <20%, <10%, or <5% in vitro or in subjects. The reduction may be temporary.
在优选的实施方式中,有效剂量的抗体或抗原结合片段In a preferred embodiment, an effective dose of antibody or antigen-binding fragment.
a)在体外或受试者中,将激活或肿瘤内调节性T细胞的数量减少至低于30%、25%、20%、10%、5%或1%和/或a) Reducing the number of activated or intratumoral regulatory T cells to less than 30%, 25%, 20%, 10%, 5%, or 1% in vitro or in subjects and/or
b)在体外或受试者中,将肿瘤内CD8+T细胞与肿瘤内Tregs的比率增加至至少5、10、15、20、25、30、40、50、60、70、80、90、100、150、200或更高和/或b) In vitro or in subjects, increasing the ratio of intratumoral CD8+ T cells to intratumoral Tregs to at least 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200 or higher and/or
c)在体外或受试者中,将肿瘤内CD4+T细胞中的调节性T细胞的百分比降低至<30%、<20%、<10%或<5%。c) Reduce the percentage of regulatory T cells among CD4+ T cells in tumors to <30%, <20%, <10%, or <5%, either in vitro or in subjects.
根据当前方面的抗体在治疗功效方面是优越的,参见实施例12ff。所提供的分离的抗体或抗原结合片段还优选地是根据方面15、16、17或18中任一项或其组合的抗体。The antibodies according to the present aspect are superior in terms of therapeutic efficacy, see Example 12ff. The provided isolated antibody or antigen-binding fragment is also preferably an antibody according to any one or a combination of aspects 15, 16, 17 or 18.
方面15-免疫细胞调节CCR8抗体Aspect 15 - Immune cell regulation CCR8 antibody
根据第十五方面,其可以与第六、第七、第八、第九、第十、第十一、第十二、第十三和/或第十四方面相同或不同,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中有效剂量的抗体或抗原结合片段增加了确定的肿瘤体积中免疫细胞的绝对数量,例如至少1.5、2、2.5、3、3.5或4倍。According to aspect fifteen, which may be the same as or different from aspects six, seven, eight, nine, ten, eleven, twelfth, thirteenth and/or fourteenth, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein an effective dose of the antibody or antigen-binding fragment increases the absolute number of immune cells in a defined tumor volume, for example, by at least 1.5, 2, 2.5, 3, 3.5 or 4 times.
实施例12.8显示在研究结束时来自不同受试者的反应性肿瘤中各种全局或特定免疫细胞标志物的mRNA表达水平大量增加。观察到增加,例如对于巨噬细胞(特别是M1巨噬细胞)、CD8+T细胞、NK细胞、CD3+T细胞、B细胞,有趣的是激活的Treg,表明这些免疫细胞群在长期治疗后在肿瘤内的浸润增加。绝对免疫细胞数量的增加也由FACS证实,参见实施例12.3(CT26)、实施例12.4(EMT6)、实施例12.5(F9)。合适的受试者包括例如人类和非人类受试者,例如小鼠、啮齿动物或食蟹猴。例如,可以在一剂、两剂、三剂或四剂有效剂量的抗体后,参见实施例12.3、12.4.2以及慢性治疗后,例如最后的治疗后测定免疫细胞的增加。例如,肿瘤可以是以肿瘤浸润淋巴细胞为特征的肿瘤,例如淋巴细胞。以肿瘤浸润性T细胞为特征的肿瘤或以促炎细胞因子的表达为特征的肿瘤。Example 12.8 showed a significant increase in the mRNA expression levels of various global or specific immune cell markers in reactive tumors from different subjects at the end of the study. Increases were observed, for example, for macrophages (especially M1 macrophages), CD8+ T cells, NK cells, CD3+ T cells, B cells, and interestingly, activated Tregs, indicating an increased infiltration of these immune cell populations into the tumor after long-term treatment. The increase in absolute immune cell numbers was also confirmed by FACS, see Examples 12.3 (CT26), 12.4 (EMT6), and 12.5 (F9). Suitable subjects include, for example, human and non-human subjects, such as mice, rodents, or cynomolgus monkeys. For example, the increase in immune cells can be measured after one, two, three, or four effective doses of the antibody, see Examples 12.3, 12.4.2, and after chronic treatment, such as after the final treatment. For example, the tumor can be a tumor characterized by tumor-infiltrating lymphocytes, such as lymphocytes; a tumor characterized by tumor-infiltrating T cells; or a tumor characterized by the expression of pro-inflammatory cytokines.
根据第十五方面的一些第一实施方式,免疫细胞至少是选自以下的一个、两个、三个、四个、五个、六个、七个、八个或九个:According to some first embodiments of the fifteenth aspect, the immune cells are selected from at least one, two, three, four, five, six, seven, eight, or nine of the following:
a)(肿瘤内)CD45+细胞,a) CD45+ cells (within the tumor)
b)(肿瘤内)CD8+T细胞,b) CD8+ T cells (within the tumor)
c)(肿瘤内)CD4+T细胞,c) CD4+ T cells (within the tumor)
d)(瘤内)巨噬细胞,例如M1巨噬细胞或M2巨噬细胞,d) Intratumoral macrophages, such as M1 or M2 macrophages.
e)(肿瘤内)NK细胞,e)(tumor-intratumor) NK cells,
f)(肿瘤内)B细胞,f)(tumor-bearing) B cells,
g)(肿瘤内)树突状细胞,g)(tumor-intratumor) dendritic cells,
h)(肿瘤内)γδT细胞(非常规T细胞),和h)(tumor-bearing) γδ T cells (unconventional T cells), and
i)iNKT细胞。i) iNKT cells.
各自的细胞类型和群体被定义为本领域已知的,并且特别是如本文别处所定义的。The respective cell types and populations are defined as those known in the art, and in particular as defined elsewhere in this document.
根据这些第一实施方式的一些高度优选实施方式,在肿瘤中三剂或更多有效剂量的抗体或抗原结合片段增加According to some highly preferred embodiments of these first embodiments, three or more effective doses of antibody or antigen-binding fragments are increased in the tumor.
a)肿瘤内CD8+T细胞的数量至至少150%、200%、250%、300%或350%,a) The number of CD8+ T cells within the tumor is at least 150%, 200%, 250%, 300%, or 350%.
b)肿瘤内CD8+T细胞与肿瘤内调节性T细胞的比率至至少4、5、10、15、20、25、30、40、50、60、70、80、90、100、150、200、或更高,b) The ratio of intratumoral CD8+ T cells to intratumoral regulatory T cells is at least 4, 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200, or higher.
c)肿瘤内巨噬细胞的数量至至少2、3、4或5倍,c) The number of macrophages within the tumor is at least 2, 3, 4, or 5 times the normal value.
d)肿瘤内ACOD1+巨噬细胞(M1巨噬细胞)的数量至少2、3、4、5、6、7、8、9或10倍,d) The number of ACOD1+ macrophages (M1 macrophages) within the tumor is at least 2, 3, 4, 5, 6, 7, 8, 9, or 10 times higher.
e)ACOD1+巨噬细胞(M1巨噬细胞)与MRC1+巨噬细胞(M2巨噬细胞)的比率至至少1.5、2、3、4、5、10或更高,e) The ratio of ACOD1+ macrophages (M1 macrophages) to MRC1+ macrophages (M2 macrophages) is at least 1.5, 2, 3, 4, 5, 10 or higher.
f)肿瘤内NK细胞的数量至至少达到140%或200%,f) The number of NK cells within the tumor must reach at least 140% or 200%.
g)肿瘤内CD3+T细胞的数量至至少150%、200%、300%或400%,g) The number of CD3+ T cells within the tumor must be at least 150%, 200%, 300%, or 400%.
h)肿瘤内B细胞的数量至少2、5、10、20、30或40倍,h) The number of B cells within the tumor is at least 2, 5, 10, 20, 30, or 40 times greater.
i)肿瘤内CD45+T细胞的数量至至少150%、200%或300%,和/或i) The number of CD45+ T cells within the tumor is at least 150%, 200%, or 300%, and/or
j)肿瘤内CD4+T细胞的数量至至少150%、200%、300%或400%。j) The number of CD4+ T cells within the tumor is at least 150%, 200%, 300%, or 400%.
肿瘤优选地是以肿瘤浸润淋巴细胞为特征的肿瘤。如技术人员所理解的,肿瘤的特征在于表达本发明抗体或片段的靶CCR8的细胞,例如肿瘤内Tregs。优选地,肿瘤是源自BALB/c株的同基因肿瘤模型中的肿瘤。例如,如实施例12.1.1所示,肿瘤可来源于CT26模型、EMT-6模型、F9模型、C38、H22或B16F10-OVA模型,其中抗体特异性结合鼠CCR8。例如,当抗体特异性结合人CCR8时,肿瘤可以选自肾上腺癌(例如肾上腺皮质癌或嗜铬细胞瘤)、膀胱癌(例如移行细胞癌、移行细胞癌-乳头状)、脑癌(例如神经胶质瘤-星形细胞瘤、神经胶质瘤-星形细胞瘤-胶质母细胞瘤、神经胶质瘤-少突星形细胞瘤、神经胶质瘤-少突胶质细胞瘤)、乳腺癌(例如ADC、ADC-导管、ADC-导管-TNBC、ADC-导管-TPBC、ADC-小叶)、结直肠癌(例如ADC)、食道癌(例如ADC)、食道癌(例如SCC)、胃癌(例如ADC、ADC-弥漫性、ADC-肠型、ADC-肠-管状)、头颈癌(例如喉癌-SCC、SCC、口腔癌-SCC)、肾癌(例如ccRCC、Chromophobe、乳头状、乳头状I型、乳头状II型)、肝癌(例如HCC)、肺癌(例如NSCLC-ADC、NSCLC-ADC-混合型、NSCLC-SCC、SCLC)、间皮瘤(例如上皮样)、卵巢癌(例如ADC-囊腺癌-浆液性乳头状癌)、胰腺癌(例如ADC-导管)、前列腺癌(例如ADC-腺泡型)、肉瘤(例如平滑肌肉瘤、去分化脂肪肉瘤、恶性纤维组织细胞瘤)、皮肤癌(例如黑色素瘤)、睾丸癌(例如生殖细胞瘤-精原细胞瘤)、胸腺瘤、甲状腺癌(例如滤泡性癌、乳头状癌-经典变体)、子宫癌(例如宫颈-SCC、宫颈-SCC-角化、宫颈-SCC-非角化、子宫内膜-ADC-子宫内膜样、子宫内膜-ADC-乳头状浆液性、子宫内膜-癌肉瘤-恶性苗勒管混合瘤),参见表11.1.2。The tumor is preferably a tumor characterized by tumor-infiltrating lymphocytes. As understood by those skilled in the art, the tumor is characterized by cells expressing the target CCR8 of the antibody or fragment of the present invention, such as intratumoral Tregs. Preferably, the tumor is a tumor derived from a syngeneic tumor model of the BALB/c strain. For example, as shown in Example 12.1.1, the tumor may be derived from a CT26 model, EMT-6 model, F9 model, C38, H22, or B16F10-OVA model, wherein the antibody specifically binds to mouse CCR8. For example, when an antibody specifically binds to human CCR8, the tumor may be selected from adrenal carcinoma (e.g., adrenocortical carcinoma or pheochromocytoma), bladder cancer (e.g., transitional cell carcinoma, transitional cell carcinoma-papillary), brain cancer (e.g., glioma-astrocytoma, glioma-astrocytoma-glioblastoma, glioma-oligodendroglioma, glioma-oligodendroglioma), breast cancer (e.g., ADC, ADC-ductal, ADC-ductal-TNBC, ADC-ductal-TPBC, ADC-lobular), colorectal cancer (e.g., ADC), esophageal cancer (e.g., ADC), esophageal cancer (e.g., SCC), gastric cancer (e.g., ADC, ADC-diffuse, ADC-intestinal type, ADC-intestinal-tubular), head and neck cancer (e.g., laryngeal cancer-SCC, SCC, oral cancer-SCC), and kidney cancer (e.g., ccRCC, Chromophobe, papillary, papillary type I). Papillary type II), liver cancer (e.g., HCC), lung cancer (e.g., NSCLC-ADC, NSCLC-ADC-mixed, NSCLC-SCC, SCLC), mesothelioma (e.g., epithelioid), ovarian cancer (e.g., ADC-cystadenocarcinoma-serous papillary carcinoma), pancreatic cancer (e.g., ADC-ductal), prostate cancer (e.g., ADC-acinoid), sarcoma (e.g., leiomyosarcoma, dedifferentiated liposarcoma, malignant fibrous histiocytoma), skin cancer (e.g., melanoma), testicular cancer (e.g., germ cell tumor-seminomatous tumor), thymoma, thyroid cancer (e.g., follicular carcinoma, papillary carcinoma-classic variant), uterine cancer (e.g., cervical-SCC, cervical-SCC-keratotic, cervical-SCC-nonkeratotic, endometrial-ADC-endometrioid, endometrial-ADC-papillary serous, endometrial-carcinosarcoma-malignant Müllerian mixed tumor), see Table 11.1.2.
在这些实施方式的一些中,免疫细胞是In some of these implementations, immune cells are
a)CD8+T细胞、CD4+T细胞和巨噬细胞,a) CD8+ T cells, CD4+ T cells, and macrophages
b)CD8+T细胞、CD4+T细胞、NK细胞,b) CD8+ T cells, CD4+ T cells, and NK cells
c)CD8+T细胞、CD4+T细胞、CD45+细胞,c) CD8+ T cells, CD4+ T cells, CD45+ cells
d)CD8+T细胞、CD4+T细胞、NK细胞和巨噬细胞,d) CD8+ T cells, CD4+ T cells, NK cells, and macrophages
e)CD8+T细胞、CD4+T细胞、NK细胞和巨噬细胞,例如ACOD1+巨噬细胞,e) CD8+ T cells, CD4+ T cells, NK cells, and macrophages, such as ACOD1+ macrophages.
f)CD8+T细胞、CD4+T细胞、NK细胞、CD45+细胞,f) CD8+ T cells, CD4+ T cells, NK cells, CD45+ cells,
g)CD8+T细胞、CD4+T细胞、NK细胞、CD45+细胞和巨噬细胞,例如ACOD1+巨噬细胞,g) CD8+ T cells, CD4+ T cells, NK cells, CD45+ cells, and macrophages, such as ACOD1+ macrophages.
h)CD8+T细胞、ACOD1+巨噬细胞(M1巨噬细胞)和B细胞,h) CD8+ T cells, ACOD1+ macrophages (M1 macrophages), and B cells,
i)CD8+T细胞、CD4+T细胞和树突细胞,其中树突细胞的特征在于表达CD1c、CD14、CD16、CD141、CD11c和CD123,或i) CD8+ T cells, CD4+ T cells, and dendritic cells, wherein dendritic cells are characterized by the expression of CD1c, CD14, CD16, CD141, CD11c, and CD123, or
j)CD8+T细胞和Acod1+巨噬细胞(M1巨噬细胞)。j) CD8+ T cells and Acod1+ macrophages (M1 macrophages).
在这些实施方式中的一些优选实施方式中,免疫细胞是In some preferred embodiments of these implementations, immune cells are
a)CD8+T细胞、CD4+T细胞和巨噬细胞,或a) CD8+ T cells, CD4+ T cells, and macrophages, or
b)CD8+T细胞、CD4+T细胞、NK细胞和巨噬细胞,或b) CD8+ T cells, CD4+ T cells, NK cells, and macrophages, or
c)CD8+T细胞、ACOD1+巨噬细胞(M1巨噬细胞)和B细胞。c) CD8+ T cells, ACOD1+ macrophages (M1 macrophages) and B cells.
根据更进一步的实施方式,免疫细胞是CD45+细胞和CD8+T细胞、CD45+细胞和CD4+T细胞、CD45+细胞和巨噬细胞(如M1巨噬细胞或M2巨噬细胞)、CD45+细胞和NK细胞、CD45+细胞和B细胞,CD45+细胞和树突状细胞、CD45+细胞和γδT细胞、CD45+细胞和iNKT细胞、CD8+T细胞和CD4+T细胞、CD8+T细胞和巨噬细胞(如M1巨噬细胞或M2巨噬细胞)、CD8+T细胞和NK细胞、CD8+T细胞和B细胞、CD8+T细胞和树突状细胞、CD8+T细胞和γδT细胞、CD8+T细胞和iNKT细胞、CD4+T细胞和巨噬细胞(如M1巨噬细胞或M2巨噬细胞)、CD4+T细胞和NK细胞、CD4+T细胞和B细胞、CD4+T细胞和树突状细胞、CD4+T细胞和γδT细胞、CD4+T细胞和iNKT细胞、巨噬细胞(如M1巨噬细胞或M2巨噬细胞)和NK细胞、巨噬细胞(如M1巨噬细胞或M2巨噬细胞)和B细胞、巨噬细胞(如M1巨噬细胞或M2巨噬细胞)和树突状细胞、巨噬细胞(如M1巨噬细胞或M2巨噬细胞)和γδT细胞、巨噬细胞(如M1巨噬细胞或M2巨噬细胞)和iNKT细胞、B细胞和树突状细胞、B细胞和γδT细胞、B细胞和iNKT细胞、树突细胞和γδT细胞、树突细胞和iNKT细胞,或γδT细胞和iNKT细胞。According to a further embodiment, the immune cells are CD45+ cells and CD8+ T cells, CD45+ cells and CD4+ T cells, CD45+ cells and macrophages (such as M1 macrophages or M2 macrophages), CD45+ cells and NK cells, CD45+ cells and B cells, CD45+ cells and dendritic cells, CD45+ cells and γδ T cells, CD45+ cells and iNKT cells, CD8+ T cells and CD4+ T cells, CD8+ T cells and macrophages (such as M1 macrophages or M2 macrophages), CD8+ T cells and NK cells, CD8+ T cells and B cells, CD8+ T cells and dendritic cells, CD8+ T cells and γδ T cells, CD8+ T cells and iNKT cells, CD4+ T cells and macrophages (such as M1 macrophages). The following are possible combinations of macrophages: M1 macrophages and M2 macrophages, CD4+ T cells and NK cells, CD4+ T cells and B cells, CD4+ T cells and dendritic cells, CD4+ T cells and γδ T cells, CD4+ T cells and iNKT cells, macrophages (such as M1 macrophages or M2 macrophages) and NK cells, macrophages (such as M1 macrophages or M2 macrophages) and B cells, macrophages (such as M1 macrophages or M2 macrophages) and dendritic cells, macrophages (such as M1 macrophages or M2 macrophages) and γδ T cells, macrophages (such as M1 macrophages or M2 macrophages) and iNKT cells, B cells and dendritic cells, B cells and γδ T cells, B cells and iNKT cells, dendritic cells and γδ T cells, dendritic cells and iNKT cells, or γδ T cells and iNKT cells.
所提供的分离的抗体或抗原结合片段还优选地是根据方面16、17或18或其组合中任一方面的抗体。The provided isolated antibody or antigen-binding fragment is preferably an antibody according to any one of aspects 16, 17 or 18 or a combination thereof.
方面16-CCR8抗体形成三级淋巴结构Regarding the formation of tertiary lymphoid structures by 16-CCR8 antibodies
根据第十六方面,其可以与第六、第七、第八、第九、第十、第十一、第十二、第十三、第十四和/或第十五方面相同或不同,提供了一种特异性结合CCR8分离的抗体或抗原结合其片段,其中抗体或抗原结合片段诱导三级淋巴结构的形成。三级淋巴结构是以LTta、LTtb、Cxcr5及其Cxcl13配体表达增加为特征的肿瘤内结构。三级淋巴结构被描述为人类抗肿瘤作用的关键驱动因素。不受理论的束缚,发明人认为这些亚结构的形成可能有助于改变免疫细胞的模式和本发明抗体的抗肿瘤作用,例如在人中。如实施例12.8中所讨论的,用本发明的抗体长期治疗持续增加了LTta、LTtb以及Cxcr5及其配体Cxcl13的表达水平。According to the sixteenth aspect, which may be the same as or different from the sixth, seventh, eighth, ninth, tenth, eleventh, twelfth, thirteenth, fourteenth, and/or fifteenth aspects, a method is provided that specifically binds to an antibody or antigen fragment isolated from CCR8, wherein the antibody or antigen-binding fragment induces the formation of tertiary lymphoid structures. Tertiary lymphoid structures are intratumoral structures characterized by increased expression of LTta, LTtb, Cxcr5, and their Cxcl13 ligand. Tertiary lymphoid structures have been described as key drivers of antitumor activity in humans. Without being bound by theory, the inventors believe that the formation of these substructures may contribute to altering immune cell patterns and the antitumor activity of the antibodies of the present invention, for example, in humans. As discussed in Example 12.8, long-term treatment with the antibodies of the present invention consistently increased the expression levels of LTta, LTtb, and Cxcr5 and its ligand Cxcl13.
序列确定的抗体Sequence-determined antibodies
根据以下两个方面17和18的抗体是用根据方面3或4的方法获得的。根据方面17和18产生的抗体特异性结合包含人趋化因子受体的硫酸化TRD的多肽,例如其中至少50%的酪氨酸残基已被硫酸化。如前所述,该方法影响所获得抗体的HCDR3的特定结构特征,也可能影响功能特征,例如G蛋白非依赖性信号传导或内化行为的调节。The antibodies according to aspects 17 and 18 are obtained using the method according to aspect 3 or 4. The antibodies produced according to aspects 17 and 18 specifically bind to polypeptides containing sulfated TRDs of human chemokine receptors, for example, in which at least 50% of tyrosine residues have been sulfated. As previously described, this method affects specific structural features of the HCDR3 of the obtained antibodies and may also affect functional features, such as the regulation of G protein-independent signaling or internalization behavior.
在公开了CDR、可变重链、可变轻链、重链或轻链的情况下,抗体的模块化性质通常允许它们组合,而且还允许与各种功能性特征组合,如本文别处所述。With the CDR, variable heavy chain, variable light chain, heavy chain, or light chain disclosed, the modular nature of antibodies generally allows for their combination, as well as their combination with a variety of functional features, as described elsewhere in this document.
方面17-抗人CCR8抗体(序列定义)Aspect 17 - Anti-human CCR8 antibody (sequence definition)
根据第十七方面,其可以与第六、第七、第八、第九、第十、第十一、第十二、第十三、第十四、第十五和/或第十六方面相同或不同,提供了分离的抗CCR8抗体或其抗原结合片段。According to aspect seventeen, which may be the same as or different from aspects six, seven, eight, nine, ten, eleven, twelfth, thirteenth, fourteenth, fifteenth and/or sixteenth, an isolated anti-CCR8 antibody or its antigen-binding fragment is provided.
优选地,根据当前方面的抗体结合(a)根据SEQ ID NO:43和/或SEQ ID NO:46的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和(b)根据SEQ ID NO:44和/或SEQ ID NO:47的分离多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和抗体对人和食蟹猴CCR8具有交叉反应性。此外,抗体的特征优选地在于使它们特别适用于治疗的特性,例如根据方面7、8、9、10、11、12、13、14、15或16中至少一个或多个方面的抗体。Preferably, the antibody according to the present aspect binds to (a) the polypeptide isolated according to SEQ ID NO: 43 and/or SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and (b) the polypeptide isolated according to SEQ ID NO: 44 and/or SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and the antibody is cross-reactive to human and cynomolgus monkey CCR8. Furthermore, the antibodies are preferably characterized by properties that make them particularly suitable for treatment, for example, antibodies according to at least one or more of aspects 7, 8, 9, 10, 11, 12, 13, 14, 15 or 16.
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含至少一个、两个、优选地三个、四个、五个或六个CDR序列,其与以下任一序列具有至少90%、95%、98%或100%序列同一性According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains at least one, two, preferably three, four, five, or six CDR sequences, which have at least 90%, 95%, 98%, or 100% sequence identity with any of the following sequences.
a)SEQ ID NO:258,SEQ ID NO:259,SEQ ID NO:260,SEQ ID NO:262,SEQ ID NO:263or SEQ ID NO:264(TPP-16966),a) SEQ ID NO: 258, SEQ ID NO: 259, SEQ ID NO: 260, SEQ ID NO: 262, SEQ ID NO: 263 or SEQ ID NO: 264 (TPP-16966),
b)SEQ ID NO:276,SEQ ID NO:277,SEQ ID NO:278,SEQ ID NO:280,SEQ ID NO:281or SEQ ID NO:282(TPP-17575),b) SEQ ID NO: 276, SEQ ID NO: 277, SEQ ID NO: 278, SEQ ID NO: 280, SEQ ID NO: 281 or SEQ ID NO: 282 (TPP-17575),
c)SEQ ID NO:294,SEQ ID NO:295,SEQ ID NO:296,SEQ ID NO:298,SEQ ID NO:299or SEQ ID NO:300(TPP-17576),c) SEQ ID NO: 294, SEQ ID NO: 295, SEQ ID NO: 296, SEQ ID NO: 298, SEQ ID NO: 299 or SEQ ID NO: 300 (TPP-17576),
d)SEQ ID NO:312,SEQ ID NO:313,SEQ ID NO:314,SEQ ID NO:316,SEQ ID NO:317or SEQ ID NO:318(TPP-17577),d) SEQ ID NO: 312, SEQ ID NO: 313, SEQ ID NO: 314, SEQ ID NO: 316, SEQ ID NO: 317 or SEQ ID NO: 318 (TPP-17577),
e)SEQ ID NO:330,SEQ ID NO:331,SEQ ID NO:332,SEQ ID NO:334,SEQ ID NO:335or SEQ ID NO:336(TPP-17578),e) SEQ ID NO: 330, SEQ ID NO: 331, SEQ ID NO: 332, SEQ ID NO: 334, SEQ ID NO: 335 or SEQ ID NO: 336 (TPP-17578),
f)SEQ ID NO:348,SEQ ID NO:349,SEQ ID NO:350,SEQ ID NO:352,SEQ ID NO:353or SEQ ID NO:354(TPP-17579),f) SEQ ID NO: 348, SEQ ID NO: 349, SEQ ID NO: 350, SEQ ID NO: 352, SEQ ID NO: 353 or SEQ ID NO: 354 (TPP-17579),
g)SEQ ID NO:366,SEQ ID NO:367,SEQ ID NO:368,SEQ ID NO:370,SEQ ID NO:371or SEQ ID NO:372(TPP-17580),g) SEQ ID NO: 366, SEQ ID NO: 367, SEQ ID NO: 368, SEQ ID NO: 370, SEQ ID NO: 371 or SEQ ID NO: 372 (TPP-17580),
h)SEQ ID NO:384,SEQ ID NO:385,SEQ ID NO:386,SEQ ID NO:388,SEQ ID NO:389or SEQ ID NO:390(TPP-17581),h) SEQ ID NO: 384, SEQ ID NO: 385, SEQ ID NO: 386, SEQ ID NO: 388, SEQ ID NO: 389 or SEQ ID NO: 390 (TPP-17581),
i)SEQ ID NO:402,SEQ ID NO:403,SEQ ID NO:404,SEQ ID NO:406,SEQ ID NO:407or SEQ ID NO:408(TPP-18205),i) SEQ ID NO: 402, SEQ ID NO: 403, SEQ ID NO: 404, SEQ ID NO: 406, SEQ ID NO: 407 or SEQ ID NO: 408 (TPP-18205),
j)SEQ ID NO:420,SEQ ID NO:421,SEQ ID NO:422,SEQ ID NO:424,SEQ ID NO:425or SEQ ID NO:426(TPP-18206),j) SEQ ID NO: 420, SEQ ID NO: 421, SEQ ID NO: 422, SEQ ID NO: 424, SEQ ID NO: 425 or SEQ ID NO: 426 (TPP-18206),
k)SEQ ID NO:438,SEQ ID NO:439,SEQ ID NO:440,SEQ ID NO:442,SEQ ID NO:443or SEQ ID NO:444(TPP-18207),k) SEQ ID NO: 438, SEQ ID NO: 439, SEQ ID NO: 440, SEQ ID NO: 442, SEQ ID NO: 443 or SEQ ID NO: 444 (TPP-18207),
l)SEQ ID NO:456,SEQ ID NO:457,SEQ ID NO:458,SEQ ID NO:460,SEQ ID NO:461or SEQ ID NO:462(TPP-19546),l) SEQ ID NO: 456, SEQ ID NO: 457, SEQ ID NO: 458, SEQ ID NO: 460, SEQ ID NO: 461 or SEQ ID NO: 462 (TPP-19546),
m)SEQ ID NO:474,SEQ ID NO:475,SEQ ID NO:476,SEQ ID NO:478,SEQ ID NO:479or SEQ ID NO:480(TPP-20950),m) SEQ ID NO: 474, SEQ ID NO: 475, SEQ ID NO: 476, SEQ ID NO: 478, SEQ ID NO: 479 or SEQ ID NO: 480 (TPP-20950),
n)SEQ ID NO:492,SEQ ID NO:493,SEQ ID NO:494,SEQ ID NO:496,SEQ ID NO:497or SEQ ID NO:498(TPP-20955),n) SEQ ID NO: 492, SEQ ID NO: 493, SEQ ID NO: 494, SEQ ID NO: 496, SEQ ID NO: 497 or SEQ ID NO: 498 (TPP-20955),
o)SEQ ID NO:510,SEQ ID NO:511,SEQ ID NO:512,SEQ ID NO:514,SEQ ID NO:515,or SEQ ID NO:516(TPP-20965),o) SEQ ID NO: 510, SEQ ID NO: 511, SEQ ID NO: 512, SEQ ID NO: 514, SEQ ID NO: 515, or SEQ ID NO: 516 (TPP-20965),
p)SEQ ID NO:528,SEQ ID NO:529,SEQ ID NO:530,SEQ ID NO:532,SEQ ID NO:533or SEQ ID NO:534(TPP-21045),p) SEQ ID NO: 528, SEQ ID NO: 529, SEQ ID NO: 530, SEQ ID NO: 532, SEQ ID NO: 533 or SEQ ID NO: 534 (TPP-21045),
q)SEQ ID NO:546,SEQ ID NO:547,SEQ ID NO:548,SEQ ID NO:550,SEQ ID NO:551or SEQ ID NO:552(TPP-21047),q) SEQ ID NO: 546, SEQ ID NO: 547, SEQ ID NO: 548, SEQ ID NO: 550, SEQ ID NO: 551 or SEQ ID NO: 552 (TPP-21047),
r)SEQ ID NO:564,SEQ ID NO:565,SEQ ID NO:566,SEQ ID NO:568,SEQ ID NO:569or SEQ ID NO:570(TPP-21181),r) SEQ ID NO: 564, SEQ ID NO: 565, SEQ ID NO: 566, SEQ ID NO: 568, SEQ ID NO: 569 or SEQ ID NO: 570 (TPP-21181),
s)SEQ ID NO:582,SEQ ID NO:583,SEQ ID NO:584,SEQ ID NO:586,SEQ ID NO:587or SEQ ID NO:588(TPP-21183),s)SEQ ID NO: 582, SEQ ID NO: 583, SEQ ID NO: 584, SEQ ID NO: 586, SEQ ID NO: 587 or SEQ ID NO: 588 (TPP-21183),
t)SEQ ID NO:600,SEQ ID NO:601,SEQ ID NO:602,SEQ ID NO:604,SEQ ID NO:605or SEQ ID NO:606(TPP-21360),t) SEQ ID NO: 600, SEQ ID NO: 601, SEQ ID NO: 602, SEQ ID NO: 604, SEQ ID NO: 605 or SEQ ID NO: 606 (TPP-21360),
u)SEQ ID NO:618,SEQ ID NO:619,SEQ ID NO:620,SEQ ID NO:622,SEQ ID NO:623or SEQ ID NO:624(TPP-23411),u)SEQ ID NO: 618, SEQ ID NO: 619, SEQ ID NO: 620, SEQ ID NO: 622, SEQ ID NO: 623 or SEQ ID NO: 624 (TPP-23411),
v)SEQ ID NO:661,SEQ ID NO:662,SEQ ID NO:663,SEQ ID NO:665,SEQ ID NO:666or SEQ ID NO:667(TPP-29596),v) SEQ ID NO: 661, SEQ ID NO: 662, SEQ ID NO: 663, SEQ ID NO: 665, SEQ ID NO: 666 or SEQ ID NO: 667 (TPP-29596),
w)SEQ ID NO:681,SEQ ID NO:682,SEQ ID NO:683,SEQ ID NO:685,SEQ ID NO:686or SEQ ID NO:687(TPP-29597),w) SEQ ID NO: 681, SEQ ID NO: 682, SEQ ID NO: 683, SEQ ID NO: 685, SEQ ID NO: 686 or SEQ ID NO: 687 (TPP-29597),
x)SEQ ID NO:703,SEQ ID NO:704,SEQ ID NO:705,SEQ ID NO:707,SEQ ID NO:708or SEQ ID NO:709(TPP-18429),x) SEQ ID NO: 703, SEQ ID NO: 704, SEQ ID NO: 705, SEQ ID NO: 707, SEQ ID NO: 708 or SEQ ID NO: 709 (TPP-18429),
y)SEQ ID NO:723,SEQ ID NO:724,SEQ ID NO:725,SEQ ID NO:727,SEQ ID NO:728or SEQ ID NO:729(TPP-18430),y) SEQ ID NO: 723, SEQ ID NO: 724, SEQ ID NO: 725, SEQ ID NO: 727, SEQ ID NO: 728 or SEQ ID NO: 729 (TPP-18430),
z)SEQ ID NO:743,SEQ ID NO:744,SEQ ID NO:745,SEQ ID NO:747,SEQ ID NO:748or SEQ ID NO:749(TPP-18432),z) SEQ ID NO: 743, SEQ ID NO: 744, SEQ ID NO: 745, SEQ ID NO: 747, SEQ ID NO: 748 or SEQ ID NO: 749 (TPP-18432),
aa)SEQ ID NO:763,SEQ ID NO:764,SEQ ID NO:765,SEQ ID NO:767,SEQ ID NO:768or SEQ ID NO:769(TPP-18433),aa) SEQ ID NO: 763, SEQ ID NO: 764, SEQ ID NO: 765, SEQ ID NO: 767, SEQ ID NO: 768 or SEQ ID NO: 769 (TPP-18433),
bb)SEQ ID NO:783,SEQ ID NO:784,SEQ ID NO:785,SEQ ID NO:787,SEQ ID NO:788or SEQ ID NO:789(TPP-18436),bb)SEQ ID NO:783, SEQ ID NO:784, SEQ ID NO:785, SEQ ID NO:787, SEQ ID NO:788or SEQ ID NO:789(TPP-18436),
cc)SEQ ID NO:803,SEQ ID NO:804,SEQ ID NO:805,SEQ ID NO:807,SEQ ID NO:808or SEQ ID NO:809(TPP-19571),cc) SEQ ID NO: 803, SEQ ID NO: 804, SEQ ID NO: 805, SEQ ID NO: 807, SEQ ID NO: 808 or SEQ ID NO: 809 (TPP-19571),
dd)SEQ ID NO:827,SEQ ID NO:828,SEQ ID NO:829,SEQ ID NO:831,SEQ ID NO:832or SEQ ID NO:833(TPP-27477),dd)SEQ ID NO: 827, SEQ ID NO: 828, SEQ ID NO: 829, SEQ ID NO: 831, SEQ ID NO: 832 or SEQ ID NO: 833 (TPP-27477),
ee)SEQ ID NO:847,SEQ ID NO:848,SEQ ID NO:849,SEQ ID NO:851,SEQ ID NO:852or SEQ ID NO:853(TPP-27478),ee) SEQ ID NO: 847, SEQ ID NO: 848, SEQ ID NO: 849, SEQ ID NO: 851, SEQ ID NO: 852 or SEQ ID NO: 853 (TPP-27478),
ff)SEQ ID NO:867,SEQ ID NO:868,SEQ ID NO:869,SEQ ID NO:871,SEQ ID NO:872or SEQ ID NO:873(TPP-27479),ff) SEQ ID NO: 867, SEQ ID NO: 868, SEQ ID NO: 869, SEQ ID NO: 871, SEQ ID NO: 872 or SEQ ID NO: 873 (TPP-27479),
gg)SEQ ID NO:887,SEQ ID NO:888,SEQ ID NO:889,SEQ ID NO:891,SEQ ID NO:892or SEQ ID NO:893(TPP-27480),gg)SEQ ID NO: 887, SEQ ID NO: 888, SEQ ID NO: 889, SEQ ID NO: 891, SEQ ID NO: 892 or SEQ ID NO: 893 (TPP-27480),
hh)SEQ ID NO:907,SEQ ID NO:908,SEQ ID NO:909,SEQ ID NO:911,SEQ ID NO:912or SEQ ID NO:913(TPP-29367),hh) SEQ ID NO: 907, SEQ ID NO: 908, SEQ ID NO: 909, SEQ ID NO: 911, SEQ ID NO: 912 or SEQ ID NO: 913 (TPP-29367),
ii)SEQ ID NO:927,SEQ ID NO:928,SEQ ID NO:929,SEQ ID NO:931,SEQ ID NO:932or SEQ ID NO:933(TPP-29368),ii) SEQ ID NO: 927, SEQ ID NO: 928, SEQ ID NO: 929, SEQ ID NO: 931, SEQ ID NO: 932 or SEQ ID NO: 933 (TPP-29368),
and/orand/or
jj)SEQ ID NO:947,SEQ ID NO:948,SEQ ID NO:949,SEQ ID NO:951,SEQ ID NO:952or SEQ ID NO:953(TPP-29369).jj) SEQ ID NO: 947, SEQ ID NO: 948, SEQ ID NO: 949, SEQ ID NO: 951, SEQ ID NO: 952 or SEQ ID NO: 953 (TPP-29369).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与SEQ IDNO:260(TPP-16966),SEQ ID NO:278(TPP-17575),SEQ ID NO:296(TPP-17576),SEQ IDNO:314(TPP-17577),SEQ ID NO:332(TPP-17578),SEQ ID NO:350(TPP-17579),SEQ IDNO:368(TPP-17580),SEQ ID NO:386(TPP-17581),SEQ ID NO:404(TPP-18205),SEQ IDNO:422(TPP-18206),SEQ ID NO:440(TPP-18207),SEQ ID NO:458(TPP-19546),SEQ IDNO:476(TPP-20950),SEQ ID NO:494(TPP-20955),SEQ ID NO:512(TPP-20965),SEQ IDNO:530(TPP-21045),SEQ ID NO:548(TPP-21047),SEQ ID NO:566(TPP-21181),SEQ IDNO:584(TPP-21183),SEQ ID NO:602(21360),or SEQ ID NO:620(TPP-23411),SEQ ID NO:663(TPP-29596),SEQ ID NO:683(TPP-29597),SEQ ID NO:705(TPP-18429),SEQ ID NO:725(TPP-18430),SEQ ID NO:745(TPP-18432),SEQ ID NO:765(TPP-18433),SEQ ID NO:785(TPP-18436),SEQ ID NO:805(TPP-19571),SEQ ID NO:829(TPP-27477),SEQ ID NO:849(TPP-27478),SEQ ID NO:869(TPP-27479),SEQ ID NO:889(TPP-27480),SEQ ID NO:909(TPP-29367),SEQ ID NO:929(TPP-29368),或SEQ ID NO:949(TPP_29369)的任一具有至少90%、95%、98%或100%序列同一性的HCDR3序列。According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment comprises SEQ ID NO: 260 (TPP-16966), SEQ ID NO: 278 (TPP-17575), SEQ ID NO: 296 (TPP-17576), SEQ ID NO: 314 (TPP-17577), SEQ ID NO: 332 (TPP-17578), SEQ ID NO: 350 (TPP-17579), SEQ ID NO: 368 (TPP-17580), SEQ ID NO: 386 (TPP-17581), SEQ ID NO: 404 (TPP-18205), SEQ ID NO: 422 (TPP-18206), SEQ ID NO: 440 (TPP-18207), SEQ ID NO: 458 (TPP-19546), SEQ ID NO: 476 (TPP-20950), SEQ ID NO: 494 (TPP-20955), SEQ ID NO: 512 (TPP-20965), SEQ ID NO: 530 (TPP-21045), SEQ ID NO: 548 (TPP-21047), SEQ ID NO: 566 (TPP-21181), SEQ ID NO: 584 (TPP-21183), SEQ ID NO: 602 (21360), or SEQ ID NO: 620 (TPP-23411), SEQ ID NO: 663 (TPP-29596), SEQ ID NO: 683 (TPP-29597), S EQ ID NO: 705 (TPP-18429), SEQ ID NO: 725 (TPP-18430), SEQ ID NO: 745 (TPP-18432), SEQ ID NO: 765 (TPP-18433), SEQ ID NO: 785 (TPP-184 36), any HCDR3 sequence having at least 90%, 95%, 98% or 100% sequence identity of SEQ ID NO: 805 (TPP-19571), SEQ ID NO: 829 (TPP-27477), SEQ ID NO: 849 (TPP-27478), SEQ ID NO: 869 (TPP-27479), SEQ ID NO: 889 (TPP-27480), SEQ ID NO: 909 (TPP-29367), SEQ ID NO: 929 (TPP-29368), or SEQ ID NO: 949 (TPP_29369).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含以下的至少一个、两个、优选地三个、四个、五个或六个CDR序列,According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains at least one, two, preferably three, four, five, or six CDR sequences.
a)SEQ ID NO:258,SEQ ID NO:259,SEQ ID NO:260,SEQ ID NO:262,SEQ ID NO:263and SEQ ID NO:264(TPP-16966),a) SEQ ID NO: 258, SEQ ID NO: 259, SEQ ID NO: 260, SEQ ID NO: 262, SEQ ID NO: 263 and SEQ ID NO: 264 (TPP-16966),
b)SEQ ID NO:276,SEQ ID NO:277,SEQ ID NO:278,SEQ ID NO:280,SEQ ID NO:281and SEQ ID NO:282(TPP-17575),b) SEQ ID NO: 276, SEQ ID NO: 277, SEQ ID NO: 278, SEQ ID NO: 280, SEQ ID NO: 281 and SEQ ID NO: 282 (TPP-17575),
c)SEQ ID NO:294,SEQ ID NO:295,SEQ ID NO:296,SEQ ID NO:298,SEQ ID NO:299and SEQ ID NO:300(TPP-17576),c) SEQ ID NO: 294, SEQ ID NO: 295, SEQ ID NO: 296, SEQ ID NO: 298, SEQ ID NO: 299 and SEQ ID NO: 300 (TPP-17576),
d)SEQ ID NO:312,SEQ ID NO:313,SEQ ID NO:314,SEQ ID NO:316,SEQ ID NO:317and SEQ ID NO:318(TPP-17577),d) SEQ ID NO: 312, SEQ ID NO: 313, SEQ ID NO: 314, SEQ ID NO: 316, SEQ ID NO: 317 and SEQ ID NO: 318 (TPP-17577),
e)SEQ ID NO:330,SEQ ID NO:331,SEQ ID NO:332,SEQ ID NO:334,SEQ ID NO:335and SEQ ID NO:336(TPP-17578),e) SEQ ID NO: 330, SEQ ID NO: 331, SEQ ID NO: 332, SEQ ID NO: 334, SEQ ID NO: 335 and SEQ ID NO: 336 (TPP-17578),
f)SEQ ID NO:348,SEQ ID NO:349,SEQ ID NO:350,SEQ ID NO:352,SEQ ID NO:353and SEQ ID NO:354(TPP-17579),f) SEQ ID NO: 348, SEQ ID NO: 349, SEQ ID NO: 350, SEQ ID NO: 352, SEQ ID NO: 353 and SEQ ID NO: 354 (TPP-17579),
g)SEQ ID NO:366,SEQ ID NO:367,SEQ ID NO:368,SEQ ID NO:370,SEQ ID NO:371and SEQ ID NO:372(TPP-17580),g) SEQ ID NO: 366, SEQ ID NO: 367, SEQ ID NO: 368, SEQ ID NO: 370, SEQ ID NO: 371 and SEQ ID NO: 372 (TPP-17580),
h)SEQ ID NO:384,SEQ ID NO:385,SEQ ID NO:386,SEQ ID NO:388,SEQ ID NO:389and SEQ ID NO:390(TPP-17581),h) SEQ ID NO: 384, SEQ ID NO: 385, SEQ ID NO: 386, SEQ ID NO: 388, SEQ ID NO: 389 and SEQ ID NO: 390 (TPP-17581),
i)SEQ ID NO:402,SEQ ID NO:403,SEQ ID NO:404,SEQ ID NO:406,SEQ ID NO:407and SEQ ID NO:408(TPP-18205),i) SEQ ID NO: 402, SEQ ID NO: 403, SEQ ID NO: 404, SEQ ID NO: 406, SEQ ID NO: 407 and SEQ ID NO: 408 (TPP-18205),
j)SEQ ID NO:420,SEQ ID NO:421,SEQ ID NO:422,SEQ ID NO:424,SEQ ID NO:425and SEQ ID NO:426(TPP-18206),j) SEQ ID NO: 420, SEQ ID NO: 421, SEQ ID NO: 422, SEQ ID NO: 424, SEQ ID NO: 425 and SEQ ID NO: 426 (TPP-18206),
k)SEQ ID NO:438,SEQ ID NO:439,SEQ ID NO:440,SEQ ID NO:442,SEQ ID NO:443and SEQ ID NO:444(TPP-18207),k) SEQ ID NO: 438, SEQ ID NO: 439, SEQ ID NO: 440, SEQ ID NO: 442, SEQ ID NO: 443 and SEQ ID NO: 444 (TPP-18207),
l)SEQ ID NO:456,SEQ ID NO:457,SEQ ID NO:458,SEQ ID NO:460,SEQ ID NO:461and SEQ ID NO:462(TPP-19546),l) SEQ ID NO: 456, SEQ ID NO: 457, SEQ ID NO: 458, SEQ ID NO: 460, SEQ ID NO: 461 and SEQ ID NO: 462 (TPP-19546),
m)SEQ ID NO:474,SEQ ID NO:475,SEQ ID NO:476,SEQ ID NO:478,SEQ ID NO:479and SEQ ID NO:480(TPP-20950),m) SEQ ID NO: 474, SEQ ID NO: 475, SEQ ID NO: 476, SEQ ID NO: 478, SEQ ID NO: 479 and SEQ ID NO: 480 (TPP-20950),
n)SEQ ID NO:492,SEQ ID NO:493,SEQ ID NO:494,SEQ ID NO:496,SEQ ID NO:497and SEQ ID NO:498(TPP-20955),n) SEQ ID NO: 492, SEQ ID NO: 493, SEQ ID NO: 494, SEQ ID NO: 496, SEQ ID NO: 497 and SEQ ID NO: 498 (TPP-20955),
o)SEQ ID NO:510,SEQ ID NO:511,SEQ ID NO:512,SEQ ID NO:514,SEQ ID NO:515,and SEQ ID NO:516(TPP-20965),o) SEQ ID NO: 510, SEQ ID NO: 511, SEQ ID NO: 512, SEQ ID NO: 514, SEQ ID NO: 515, and SEQ ID NO: 516 (TPP-20965),
p)SEQ ID NO:528,SEQ ID NO:529,SEQ ID NO:530,SEQ ID NO:532,SEQ ID NO:533and SEQ ID NO:534(TPP-21045),p) SEQ ID NO: 528, SEQ ID NO: 529, SEQ ID NO: 530, SEQ ID NO: 532, SEQ ID NO: 533 and SEQ ID NO: 534 (TPP-21045),
q)SEQ ID NO:546,SEQ ID NO:547,SEQ ID NO:548,SEQ ID NO:550,SEQ ID NO:551and SEQ ID NO:552(TPP-21047),q) SEQ ID NO: 546, SEQ ID NO: 547, SEQ ID NO: 548, SEQ ID NO: 550, SEQ ID NO: 551 and SEQ ID NO: 552 (TPP-21047),
r)SEQ ID NO:564,SEQ ID NO:565,SEQ ID NO:566,SEQ ID NO:568,SEQ ID NO:569and SEQ ID NO:570(TPP-21181),r)SEQ ID NO:564, SEQ ID NO:565, SEQ ID NO:566, SEQ ID NO:568, SEQ ID NO:569and SEQ ID NO:570 (TPP-21181),
s)SEQ ID NO:582,SEQ ID NO:583,SEQ ID NO:584,SEQ ID NO:586,SEQ ID NO:587and SEQ ID NO:588(TPP-21183),s)SEQ ID NO:582, SEQ ID NO:583, SEQ ID NO:584, SEQ ID NO:586, SEQ ID NO:587and SEQ ID NO:588 (TPP-21183),
t)SEQ ID NO:600,SEQ ID NO:601,SEQ ID NO:602,SEQ ID NO:604,SEQ ID NO:605or SEQ ID NO:606(TPP-21360),t) SEQ ID NO: 600, SEQ ID NO: 601, SEQ ID NO: 602, SEQ ID NO: 604, SEQ ID NO: 605 or SEQ ID NO: 606 (TPP-21360),
u)SEQ ID NO:618,SEQ ID NO:619,SEQ ID NO:620,SEQ ID NO:622,SEQ ID NO:623or SEQ ID NO:624(TPP-23411),u)SEQ ID NO: 618, SEQ ID NO: 619, SEQ ID NO: 620, SEQ ID NO: 622, SEQ ID NO: 623 or SEQ ID NO: 624 (TPP-23411),
V)SEQ ID NO:661,SEQ ID NO:662,SEQ ID NO:663,SEQ ID NO:665,SEQ ID NO:666or SEQ ID NO:667(TPP-29596),V) SEQ ID NO: 661, SEQ ID NO: 662, SEQ ID NO: 663, SEQ ID NO: 665, SEQ ID NO: 666 or SEQ ID NO: 667 (TPP-29596),
w)SEQ ID NO:681,SEQ ID NO:682,SEQ ID NO:683,SEQ ID NO:685,SEQ ID NO:686or SEQ ID NO:687(TPP-29597),w) SEQ ID NO: 681, SEQ ID NO: 682, SEQ ID NO: 683, SEQ ID NO: 685, SEQ ID NO: 686 or SEQ ID NO: 687 (TPP-29597),
x)SEQ ID NO:703,SEQ ID NO:704,SEQ ID NO:705,SEQ ID NO:707,SEQ ID NO:708or SEQ ID NO:709(TPP-18429),x) SEQ ID NO: 703, SEQ ID NO: 704, SEQ ID NO: 705, SEQ ID NO: 707, SEQ ID NO: 708 or SEQ ID NO: 709 (TPP-18429),
y)SEQ ID NO:723,SEQ ID NO:724,SEQ ID NO:725,SEQ ID NO:727,SEQ ID NO:728or SEQ ID NO:729(TPP-18430),y) SEQ ID NO: 723, SEQ ID NO: 724, SEQ ID NO: 725, SEQ ID NO: 727, SEQ ID NO: 728 or SEQ ID NO: 729 (TPP-18430),
z)SEQ ID NO:743,SEQ ID NO:744,SEQ ID NO:745,SEQ ID NO:747,SEQ ID NO:748or SEQ ID NO:749(TPP-18432),z) SEQ ID NO: 743, SEQ ID NO: 744, SEQ ID NO: 745, SEQ ID NO: 747, SEQ ID NO: 748 or SEQ ID NO: 749 (TPP-18432),
aa)SEQ ID NO:763,SEQ ID NO:764,SEQ ID NO:765,SEQ ID NO:767,SEQ ID NO:768or SEQ ID NO:769(TPP-18433),aa) SEQ ID NO: 763, SEQ ID NO: 764, SEQ ID NO: 765, SEQ ID NO: 767, SEQ ID NO: 768 or SEQ ID NO: 769 (TPP-18433),
bb)SEQ ID NO:783,SEQ ID NO:784,SEQ ID NO:785,SEQ ID NO:787,SEQ ID NO:788or SEQ ID NO:789(TPP-18436),bb)SEQ ID NO:783, SEQ ID NO:784, SEQ ID NO:785, SEQ ID NO:787, SEQ ID NO:788or SEQ ID NO:789(TPP-18436),
cc)SEQ ID NO:803,SEQ ID NO:804,SEQ ID NO:805,SEQ ID NO:807,SEQ ID NO:808or SEQ ID NO:809(TPP-19571),cc) SEQ ID NO: 803, SEQ ID NO: 804, SEQ ID NO: 805, SEQ ID NO: 807, SEQ ID NO: 808 or SEQ ID NO: 809 (TPP-19571),
dd)SEQ ID NO:827,SEQ ID NO:828,SEQ ID NO:829,SEQ ID NO:831,SEQ ID NO:832or SEQ ID NO:833(TPP-27477),dd)SEQ ID NO: 827, SEQ ID NO: 828, SEQ ID NO: 829, SEQ ID NO: 831, SEQ ID NO: 832 or SEQ ID NO: 833 (TPP-27477),
ee)SEQ ID NO:847,SEQ ID NO:848,SEQ ID NO:849,SEQ ID NO:851,SEQ ID NO:852or SEQ ID NO:853(TPP-27478),ee) SEQ ID NO: 847, SEQ ID NO: 848, SEQ ID NO: 849, SEQ ID NO: 851, SEQ ID NO: 852 or SEQ ID NO: 853 (TPP-27478),
ff)SEQ ID NO:867,SEQ ID NO:868,SEQ ID NO:869,SEQ ID NO:871,SEQ ID NO:872or SEQ ID NO:873(TPP-27479),ff) SEQ ID NO: 867, SEQ ID NO: 868, SEQ ID NO: 869, SEQ ID NO: 871, SEQ ID NO: 872 or SEQ ID NO: 873 (TPP-27479),
gg)SEQ ID NO:887,SEQ ID NO:888,SEQ ID NO:889,SEQ ID NO:891,SEQ ID NO:892or SEQ ID NO:893(TPP-27480),gg)SEQ ID NO: 887, SEQ ID NO: 888, SEQ ID NO: 889, SEQ ID NO: 891, SEQ ID NO: 892 or SEQ ID NO: 893 (TPP-27480),
hh)SEQ ID NO:907,SEQ ID NO:908,SEQ ID NO:909,SEQ ID NO:911,SEQ ID NO:912or SEQ ID NO:913(TPP-29367),hh) SEQ ID NO: 907, SEQ ID NO: 908, SEQ ID NO: 909, SEQ ID NO: 911, SEQ ID NO: 912 or SEQ ID NO: 913 (TPP-29367),
ii)SEQ ID NO:927,SEQ ID NO:928,SEQ ID NO:929,SEQ ID NO:931,SEQ ID NO:932or SEQ ID NO:933(TPP-29368),ii) SEQ ID NO: 927, SEQ ID NO: 928, SEQ ID NO: 929, SEQ ID NO: 931, SEQ ID NO: 932 or SEQ ID NO: 933 (TPP-29368),
and/orand/or
jj)SEQ ID NO:947,SEQ ID NO:948,SEQ ID NO:949,SEQ ID NO:951,SEQ ID NO:952or SEQ ID NO:953(TPP-29369),jj) SEQ ID NO: 947, SEQ ID NO: 948, SEQ ID NO: 949, SEQ ID NO: 951, SEQ ID NO: 952 or SEQ ID NO: 953 (TPP-29369),
任选地,至多一个、两个、三个、四个或五个突变已被引入至少一个CDR。优选地,HCDR3包含或已被工程化以包含至少一个或多个如别处所述的组氨酸残基。Optionally, at most one, two, three, four, or five mutations have been introduced into at least one CDR. Preferably, HCDR3 comprises or has been engineered to comprise at least one or more histidine residues as described elsewhere.
例如,酪氨酸可以与带正电荷的氨基酸如组氨酸交换,反之亦然。例如,带正电荷的氨基酸可以与不同的带正电荷的氨基酸交换,带负电荷的氨基酸可以与不同的带负电荷的氨基酸交换,极性氨基酸可以与不同的极性氨基酸交换,极性不带电氨基酸可以与不同极性不带电氨基酸交换,小氨基酸可以与不同小氨基酸交换,两性氨基酸可以与不同两性氨基酸交换,芳香族氨基酸可与具有不同的芳香族氨基酸交换。如技术人员所理解的,具体的不改变抗体与CCR8的硫酸化TRD之间的特异性相互作用的氨基酸交换是可能的。For example, tyrosine can exchange with positively charged amino acids such as histidine, and vice versa. Similarly, positively charged amino acids can exchange with different positively charged amino acids, negatively charged amino acids can exchange with different negatively charged amino acids, polar amino acids can exchange with different polar amino acids, polar uncharged amino acids can exchange with different polar uncharged amino acids, small amino acids can exchange with different small amino acids, amphoteric amino acids can exchange with different amphoteric amino acids, and aromatic amino acids can exchange with different aromatic amino acids. As understood by those skilled in the art, specific amino acid exchanges that do not alter the specific interaction between the antibody and the sulfated TRD of CCR8 are possible.
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与以下具有至少90%、95%、98%或100%序列同一性的可变重链序列和/或可变轻链序列According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment comprises a variable heavy chain sequence and/or a variable light chain sequence having at least 90%, 95%, 98%, or 100% sequence identity with the following sequences.
a)根据SEQ ID NO:257的可变重链序列和/或根据SEQ ID NO:261的可变轻链序列(TPP-16966),a) According to the variable heavy chain sequence of SEQ ID NO: 257 and/or according to the variable light chain sequence (TPP-16966) of SEQ ID NO: 261,
b)根据SEQ ID NO:275的可变重链序列和/或根据SEQ ID NO:279的可变轻链序列(TPP-17575),b) According to the variable heavy chain sequence of SEQ ID NO: 275 and/or according to the variable light chain sequence (TPP-17575) of SEQ ID NO: 279,
c)根据SEQ ID NO:293的可变重链序列和/或根据SEQ ID NO:297的可变轻链序列(TPP-17576),c) The variable heavy chain sequence according to SEQ ID NO: 293 and/or the variable light chain sequence (TPP-17576) according to SEQ ID NO: 297.
d)根据SEQ ID NO:311的可变重链序列和/或根据SEQ ID NO:315的可变轻链序列(TPP-17577),d) According to the variable heavy chain sequence of SEQ ID NO: 311 and/or according to the variable light chain sequence (TPP-17577) of SEQ ID NO: 315,
e)根据SEQ ID NO:329的可变重链序列和/或根据SEQ ID NO:333的可变轻链序列(TPP-17578),e) According to the variable heavy chain sequence of SEQ ID NO: 329 and/or according to the variable light chain sequence (TPP-17578) of SEQ ID NO: 333,
f)根据SEQ ID NO:347的可变重链序列和/或根据SEQ ID NO:351的可变轻链序列(TPP-17579),f) The variable heavy chain sequence according to SEQ ID NO: 347 and/or the variable light chain sequence (TPP-17579) according to SEQ ID NO: 351,
g)根据SEQ ID NO:365的可变重链序列和/或根据SEQ ID NO:369的可变轻链序列(TPP-17580),g) According to the variable heavy chain sequence of SEQ ID NO: 365 and/or according to the variable light chain sequence (TPP-17580) of SEQ ID NO: 369,
h)根据SEQ ID NO:383的可变重链序列和/或根据SEQ ID NO:387的可变轻链序列(TPP-17581),h) According to the variable heavy chain sequence of SEQ ID NO: 383 and/or according to the variable light chain sequence (TPP-17581) of SEQ ID NO: 387,
i)根据SEQ ID NO:401的可变重链序列和/或根据SEQ ID NO:405的可变轻链序列(TPP-18205),i) The variable heavy chain sequence according to SEQ ID NO: 401 and/or the variable light chain sequence (TPP-18205) according to SEQ ID NO: 405,
j)根据SEQ ID NO:419的可变重链序列和/或根据SEQ ID NO:423的可变轻链序列(TPP-18206),j) The variable heavy chain sequence according to SEQ ID NO: 419 and/or the variable light chain sequence (TPP-18206) according to SEQ ID NO: 423,
k)根据SEQ ID NO:437的可变重链序列和/或根据SEQ ID NO:441的可变轻链序列(TPP-18207),k) The variable heavy chain sequence according to SEQ ID NO: 437 and/or the variable light chain sequence (TPP-18207) according to SEQ ID NO: 441,
1)根据SEQ ID NO:455的可变重链序列和/或根据SEQ ID NO:459的可变轻链序列(TPP-19546),1) According to the variable heavy chain sequence of SEQ ID NO: 455 and/or according to the variable light chain sequence (TPP-19546) of SEQ ID NO: 459,
m)根据SEQ ID NO:473的可变重链序列和/或根据SEQ ID NO:477的可变轻链序列(TPP-20950),m) The variable heavy chain sequence according to SEQ ID NO: 473 and/or the variable light chain sequence (TPP-20950) according to SEQ ID NO: 477,
n)根据SEQ ID NO:491的可变重链序列和/或根据SEQ ID NO:495的可变轻链序列(TPP-20955),n) According to the variable heavy chain sequence of SEQ ID NO: 491 and/or according to the variable light chain sequence (TPP-20955) of SEQ ID NO: 495,
o)根据SEQ ID NO:509的可变重链序列和/或根据SEQ ID NO:513的可变轻链序列(TPP-20965),o) According to the variable heavy chain sequence of SEQ ID NO: 509 and/or according to the variable light chain sequence (TPP-20965) of SEQ ID NO: 513,
p)根据SEQ ID NO:527的可变重链序列和/或根据SEQ ID NO:531的可变轻链序列(TPP-21045),p) According to the variable heavy chain sequence of SEQ ID NO: 527 and/or according to the variable light chain sequence (TPP-21045) of SEQ ID NO: 531,
q)根据SEQ ID NO:545的可变重链序列和/或根据SEQ ID NO:549的可变轻链序列(TPP-21047),q) The variable heavy chain sequence according to SEQ ID NO: 545 and/or the variable light chain sequence (TPP-21047) according to SEQ ID NO: 549,
r)根据SEQ ID NO:563的可变重链序列和/或根据SEQ ID NO:567的可变轻链序列(TPP-21181),r) According to the variable heavy chain sequence of SEQ ID NO: 563 and/or according to the variable light chain sequence (TPP-21181) of SEQ ID NO: 567,
s)根据SEQ ID NO:581的可变重链序列和/或根据SEQ ID NO:585的可变轻链序列(TPP-21183),s) According to the variable heavy chain sequence of SEQ ID NO: 581 and/or according to the variable light chain sequence (TPP-21183) of SEQ ID NO: 585,
t)根据SEQ ID NO:599的可变重链序列和/或根据SEQ ID NO:603的可变轻链序列(TPP-21360),t) According to the variable heavy chain sequence of SEQ ID NO: 599 and/or according to the variable light chain sequence (TPP-21360) of SEQ ID NO: 603,
u)根据SEQ ID NO:617的可变重链序列和/或根据SEQ ID NO:621的可变轻链序列(TPP-23411),u) The variable heavy chain sequence according to SEQ ID NO: 617 and/or the variable light chain sequence (TPP-23411) according to SEQ ID NO: 621,
v)根据SEQ ID NO:660的可变重链序列和/或根据SEQ ID NO:664的可变轻链序列(TPP-29596),v) The variable heavy chain sequence according to SEQ ID NO: 660 and/or the variable light chain sequence (TPP-29596) according to SEQ ID NO: 664,
w)根据SEQ ID NO:680的可变重链序列和/或根据SEQ ID NO:684的可变轻链序列(TPP-29597),w) According to the variable heavy chain sequence of SEQ ID NO: 680 and/or according to the variable light chain sequence (TPP-29597) of SEQ ID NO: 684,
x)根据SEQ ID NO:702的可变重链序列和/或根据SEQ ID NO:706的可变轻链序列(TPP-18429),x) The variable heavy chain sequence according to SEQ ID NO: 702 and/or the variable light chain sequence (TPP-18429) according to SEQ ID NO: 706,
y)根据SEQ ID NO:722的可变重链序列和/或根据SEQ ID NO:726的可变轻链序列(TPP-18430),y) According to the variable heavy chain sequence of SEQ ID NO: 722 and/or according to the variable light chain sequence (TPP-18430) of SEQ ID NO: 726,
z)根据SEQ ID NO:742的可变重链序列和/或根据SEQ ID NO:746的可变轻链序列(TPP-18432),z) The variable heavy chain sequence according to SEQ ID NO: 742 and/or the variable light chain sequence (TPP-18432) according to SEQ ID NO: 746.
aa)根据SEQ ID NO:762的可变重链序列和/或根据SEQ ID NO:766的可变轻链序列(TPP-18433),aa) The variable heavy chain sequence according to SEQ ID NO: 762 and/or the variable light chain sequence (TPP-18433) according to SEQ ID NO: 766.
bb)根据SEQ ID NO:782的可变重链序列和/或根据SEQ ID NO:786的可变轻链序列(TPP-18436),bb) According to the variable heavy chain sequence of SEQ ID NO: 782 and/or according to the variable light chain sequence (TPP-18436) of SEQ ID NO: 786,
cc)根据SEQ ID NO:802的可变重链序列和/或根据SEQ ID NO:806的可变轻链序列(TPP-19571),cc) based on the variable heavy chain sequence of SEQ ID NO: 802 and/or based on the variable light chain sequence (TPP-19571) of SEQ ID NO: 806,
dd)根据SEQ ID NO:826的可变重链序列和/或根据SEQ ID NO:830的可变轻链序列(TPP-27477),(dd) According to the variable heavy chain sequence of SEQ ID NO: 826 and/or according to the variable light chain sequence (TPP-27477) of SEQ ID NO: 830,
ee)根据SEQ ID NO:846的可变重链序列和/或根据SEQ ID NO:850的可变轻链序列(TPP-27478),(ee) According to the variable heavy chain sequence of SEQ ID NO: 846 and/or according to the variable light chain sequence (TPP-27478) of SEQ ID NO: 850,
ff)根据SEQ ID NO:866的可变重链序列和/或根据SEQ ID NO:870的可变轻链序列(TPP-27479),ff) According to the variable heavy chain sequence of SEQ ID NO: 866 and/or according to the variable light chain sequence (TPP-27479) of SEQ ID NO: 870,
gg)根据SEQ ID NO:886的可变重链序列和/或根据SEQ ID NO:890的可变轻链序列(TPP-27480),(gg) According to the variable heavy chain sequence of SEQ ID NO: 886 and/or according to the variable light chain sequence (TPP-27480) of SEQ ID NO: 890,
hh)根据SEQ ID NO:906的可变重链序列和/或根据SEQ ID NO:910的可变轻链序列(TPP-29367),hh) Based on the variable heavy chain sequence of SEQ ID NO: 906 and/or based on the variable light chain sequence (TPP-29367) of SEQ ID NO: 910,
ii)根据SEQ ID NO:926的可变重链序列和/或根据SEQ ID NO:930的可变轻链序列(TPP-29368),或ii) The variable heavy chain sequence according to SEQ ID NO: 926 and/or the variable light chain sequence (TPP-29368) according to SEQ ID NO: 930, or
jj)根据SEQ ID NO:946的可变重链序列和/或根据SEQ ID NO:950的可变轻链序列(TPP-29369)。jj) The variable heavy chain sequence according to SEQ ID NO: 946 and/or the variable light chain sequence according to SEQ ID NO: 950 (TPP-29369).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains...
a)根据SEQ ID NO:257的可变重链序列和/或根据SEQ ID NO:261的可变轻链序列(TPP-16966),a) According to the variable heavy chain sequence of SEQ ID NO: 257 and/or according to the variable light chain sequence (TPP-16966) of SEQ ID NO: 261,
b)根据SEQ ID NO:275的可变重链序列和/或根据SEQ ID NO:279的可变轻链序列(TPP-17575),b) According to the variable heavy chain sequence of SEQ ID NO: 275 and/or according to the variable light chain sequence (TPP-17575) of SEQ ID NO: 279,
c)根据SEQ ID NO:293的可变重链序列和/或根据SEQ ID NO:297的可变轻链序列(TPP-17576),c) The variable heavy chain sequence according to SEQ ID NO: 293 and/or the variable light chain sequence (TPP-17576) according to SEQ ID NO: 297.
d)根据SEQ ID NO:311的可变重链序列和/或根据SEQ ID NO:315的可变轻链序列(TPP-17577),d) According to the variable heavy chain sequence of SEQ ID NO: 311 and/or according to the variable light chain sequence (TPP-17577) of SEQ ID NO: 315,
e)根据SEQ ID NO:329的可变重链序列和/或根据SEQ ID NO:333的可变轻链序列(TPP-17578),e) According to the variable heavy chain sequence of SEQ ID NO: 329 and/or according to the variable light chain sequence (TPP-17578) of SEQ ID NO: 333,
f)根据SEQ ID NO:347的可变重链序列和/或根据SEQ ID NO:351的可变轻链序列(TPP-17579),f) The variable heavy chain sequence according to SEQ ID NO: 347 and/or the variable light chain sequence (TPP-17579) according to SEQ ID NO: 351,
g)根据SEQ ID NO:365的可变重链序列和/或根据SEQ ID NO:369的可变轻链序列(TPP-17580),g) According to the variable heavy chain sequence of SEQ ID NO: 365 and/or according to the variable light chain sequence (TPP-17580) of SEQ ID NO: 369,
h)根据SEQ ID NO:383的可变重链序列和/或根据SEQ ID NO:387的可变轻链序列(TPP-17581),h) According to the variable heavy chain sequence of SEQ ID NO: 383 and/or according to the variable light chain sequence (TPP-17581) of SEQ ID NO: 387,
i)根据SEQ ID NO:401的可变重链序列和/或根据SEQ ID NO:405的可变轻链序列(TPP-18205),i) The variable heavy chain sequence according to SEQ ID NO: 401 and/or the variable light chain sequence (TPP-18205) according to SEQ ID NO: 405,
j)根据SEQ ID NO:419的可变重链序列和/或根据SEQ ID NO:423的可变轻链序列(TPP-18206),j) The variable heavy chain sequence according to SEQ ID NO: 419 and/or the variable light chain sequence (TPP-18206) according to SEQ ID NO: 423,
k)根据SEQ ID NO:437的可变重链序列和/或根据SEQ ID NO:441的可变轻链序列(TPP-18207),k) The variable heavy chain sequence according to SEQ ID NO: 437 and/or the variable light chain sequence (TPP-18207) according to SEQ ID NO: 441,
1)根据SEQ ID NO:455的可变重链序列和/或根据SEQ ID NO:459的可变轻链序列(TPP-19546),1) According to the variable heavy chain sequence of SEQ ID NO: 455 and/or according to the variable light chain sequence (TPP-19546) of SEQ ID NO: 459,
m)根据SEQ ID NO:473的可变重链序列和/或根据SEQ ID NO:477的可变轻链序列(TPP-20950),m) The variable heavy chain sequence according to SEQ ID NO: 473 and/or the variable light chain sequence (TPP-20950) according to SEQ ID NO: 477,
n)根据SEQ ID NO:491的可变重链序列和/或根据SEQ ID NO:495的可变轻链序列(TPP-20955),n) According to the variable heavy chain sequence of SEQ ID NO: 491 and/or according to the variable light chain sequence (TPP-20955) of SEQ ID NO: 495,
o)根据SEQ ID NO:509的可变重链序列和/或根据SEQ ID NO:513的可变轻链序列(TPP-20965),o) According to the variable heavy chain sequence of SEQ ID NO: 509 and/or according to the variable light chain sequence (TPP-20965) of SEQ ID NO: 513,
p)根据SEQ ID NO:527的可变重链序列和/或根据SEQ ID NO:531的可变轻链序列(TPP-21045),p) According to the variable heavy chain sequence of SEQ ID NO: 527 and/or according to the variable light chain sequence (TPP-21045) of SEQ ID NO: 531,
q)根据SEQ ID NO:545的可变重链序列和/或根据SEQ ID NO:549的可变轻链序列(TPP-21047),q) The variable heavy chain sequence according to SEQ ID NO: 545 and/or the variable light chain sequence (TPP-21047) according to SEQ ID NO: 549,
r)根据SEQ ID NO:563的可变重链序列和/或根据SEQ ID NO:567的可变轻链序列(TPP-21181),r) According to the variable heavy chain sequence of SEQ ID NO: 563 and/or according to the variable light chain sequence (TPP-21181) of SEQ ID NO: 567,
s)根据SEQ ID NO:581的可变重链序列和/或根据SEQ ID NO:585的可变轻链序列(TPP-21183),s) According to the variable heavy chain sequence of SEQ ID NO: 581 and/or according to the variable light chain sequence (TPP-21183) of SEQ ID NO: 585,
t)根据SEQ ID NO:599的可变重链序列和/或根据SEQ ID NO:603的可变轻链序列(TPP-21360),t) According to the variable heavy chain sequence of SEQ ID NO: 599 and/or according to the variable light chain sequence (TPP-21360) of SEQ ID NO: 603,
u)根据SEQ ID NO:617的可变重链序列和/或根据SEQ ID NO:621的可变轻链序列(TPP-23411),u) The variable heavy chain sequence according to SEQ ID NO: 617 and/or the variable light chain sequence (TPP-23411) according to SEQ ID NO: 621,
v)根据SEQ ID NO:660的可变重链序列和/或根据SEQ ID NO:664的可变轻链序列(TPP-29596),v) The variable heavy chain sequence according to SEQ ID NO: 660 and/or the variable light chain sequence (TPP-29596) according to SEQ ID NO: 664,
w)根据SEQ ID NO:680的可变重链序列和/或根据SEQ ID NO:684的可变轻链序列(TPP-29597),w) According to the variable heavy chain sequence of SEQ ID NO: 680 and/or according to the variable light chain sequence (TPP-29597) of SEQ ID NO: 684,
x)根据SEQ ID NO:702的可变重链序列和/或根据SEQ ID NO:706的可变轻链序列(TPP-18429),x) The variable heavy chain sequence according to SEQ ID NO: 702 and/or the variable light chain sequence (TPP-18429) according to SEQ ID NO: 706,
y)根据SEQ ID NO:722的可变重链序列和/或根据SEQ ID NO:726的可变轻链序列(TPP-18430),y) According to the variable heavy chain sequence of SEQ ID NO: 722 and/or according to the variable light chain sequence (TPP-18430) of SEQ ID NO: 726,
z)根据SEQ ID NO:742的可变重链序列和/或根据SEQ ID NO:746的可变轻链序列(TPP-18432),z) The variable heavy chain sequence according to SEQ ID NO: 742 and/or the variable light chain sequence (TPP-18432) according to SEQ ID NO: 746.
aa)根据SEQ ID NO:762的可变重链序列和/或根据SEQ ID NO:766的可变轻链序列(TPP-18433),aa) The variable heavy chain sequence according to SEQ ID NO: 762 and/or the variable light chain sequence (TPP-18433) according to SEQ ID NO: 766.
bb)根据SEQ ID NO:782的可变重链序列和/或根据SEQ ID NO:786的可变轻链序列(TPP-18436),bb) According to the variable heavy chain sequence of SEQ ID NO: 782 and/or according to the variable light chain sequence (TPP-18436) of SEQ ID NO: 786,
cc)根据SEQ ID NO:802的可变重链序列和/或根据SEQ IDNO:806的可变轻链序列(TPP-19571),cc) According to the variable heavy chain sequence of SEQ ID NO: 802 and/or according to the variable light chain sequence (TPP-19571) of SEQ ID NO: 806,
dd)根据SEQ ID NO:826的可变重链序列和/或根据SEQ ID NO:830的可变轻链序列(TPP-27477),(dd) According to the variable heavy chain sequence of SEQ ID NO: 826 and/or according to the variable light chain sequence (TPP-27477) of SEQ ID NO: 830,
ee)根据SEQ ID NO:846的可变重链序列和/或根据SEQ ID NO:850的可变轻链序列(TPP-27478),(ee) According to the variable heavy chain sequence of SEQ ID NO: 846 and/or according to the variable light chain sequence (TPP-27478) of SEQ ID NO: 850,
ff)根据SEQ ID NO:866的可变重链序列和/或根据SEQ ID NO:870的可变轻链序列(TPP-27479),ff) According to the variable heavy chain sequence of SEQ ID NO: 866 and/or according to the variable light chain sequence (TPP-27479) of SEQ ID NO: 870,
gg)根据SEQ ID NO:886的可变重链序列和/或根据SEQ ID NO:890的可变轻链序列(TPP-27480),(gg) According to the variable heavy chain sequence of SEQ ID NO: 886 and/or according to the variable light chain sequence (TPP-27480) of SEQ ID NO: 890,
hh)根据SEQ ID NO:906的可变重链序列和/或根据SEQ ID NO:910的可变轻链序列(TPP-29367),hh) Based on the variable heavy chain sequence of SEQ ID NO: 906 and/or based on the variable light chain sequence (TPP-29367) of SEQ ID NO: 910,
ii)根据SEQ ID NO:926的可变重链序列和/或根据SEQ ID NO:930的可变轻链序列(TPP-29368),或ii) The variable heavy chain sequence according to SEQ ID NO: 926 and/or the variable light chain sequence (TPP-29368) according to SEQ ID NO: 930, or
jj)根据SEQ ID NO:946的可变重链序列和/或根据SEQ ID NO:950的可变轻链序列(TPP-29369)。jj) The variable heavy chain sequence according to SEQ ID NO: 946 and/or the variable light chain sequence according to SEQ ID NO: 950 (TPP-29369).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与以下序列具有至少90%、95%、98%或100%序列同一性的重链序列和/或轻链序列According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment comprises a heavy chain sequence and/or a light chain sequence having at least 90%, 95%, 98%, or 100% sequence identity with the following sequences.
a)根据SEQ ID NO:273的重链和根据SEQ ID NO:274的轻链(TPP-16966),a) The heavy chain according to SEQ ID NO: 273 and the light chain according to SEQ ID NO: 274 (TPP-16966),
b)根据SEQ ID NO:291的重链和根据SEQ ID NO:292的轻链(TPP-17575),b) The heavy chain according to SEQ ID NO: 291 and the light chain according to SEQ ID NO: 292 (TPP-17575),
c)根据SEQ ID NO:309的重链和根据SEQ ID NO:310的轻链(TPP-17576),c) The heavy chain according to SEQ ID NO: 309 and the light chain according to SEQ ID NO: 310 (TPP-17576),
d)根据SEQ ID NO:327的重链和根据SEQ ID NO:328的轻链(TPP-17577),d) The heavy chain according to SEQ ID NO: 327 and the light chain according to SEQ ID NO: 328 (TPP-17577),
e)根据SEQ ID NO:345的重链和根据SEQ ID NO:346的轻链(TPP-17578),e) The heavy chain according to SEQ ID NO: 345 and the light chain according to SEQ ID NO: 346 (TPP-17578),
f)根据SEQ ID NO:363的重链和根据SEQ ID NO:364的轻链(TPP-17579),f) The heavy chain according to SEQ ID NO: 363 and the light chain according to SEQ ID NO: 364 (TPP-17579),
g)根据SEQ ID NO:381的重链和根据SEQ ID NO:382的轻链(TPP-17580),g) The heavy chain according to SEQ ID NO: 381 and the light chain according to SEQ ID NO: 382 (TPP-17580),
h)根据SEQ ID NO:399的重链和根据SEQ ID NO:400的轻链(TPP-17581),h) The heavy chain according to SEQ ID NO: 399 and the light chain according to SEQ ID NO: 400 (TPP-17581),
i)根据SEQ ID NO:417的重链和根据SEQ ID NO:418的轻链(TPP-18205),i) The heavy chain according to SEQ ID NO: 417 and the light chain according to SEQ ID NO: 418 (TPP-18205),
j)根据SEQ ID NO:435的重链和根据SEQ ID NO:436的轻链(TPP-18206),j) The heavy chain according to SEQ ID NO: 435 and the light chain according to SEQ ID NO: 436 (TPP-18206),
k)根据SEQ ID NO:453的重链和根据SEQ ID NO:454的轻链(TPP-18207),k) The heavy chain according to SEQ ID NO: 453 and the light chain according to SEQ ID NO: 454 (TPP-18207),
l)根据SEQ ID NO:471的重链和根据SEQ ID NO:472的轻链(TPP-19546),l) The heavy chain according to SEQ ID NO: 471 and the light chain according to SEQ ID NO: 472 (TPP-19546),
m)根据SEQ ID NO:489的重链和根据SEQ ID NO:490的轻链(TPP-20950),m) The heavy chain according to SEQ ID NO: 489 and the light chain according to SEQ ID NO: 490 (TPP-20950),
n)根据SEQ ID NO:507的重链和根据SEQ ID NO:508的轻链(TPP-20955),n) The heavy chain according to SEQ ID NO: 507 and the light chain according to SEQ ID NO: 508 (TPP-20955),
o)根据SEQ ID NO:525的重链和根据SEQ ID NO:526的轻链(TPP-20965),o) The heavy chain according to SEQ ID NO: 525 and the light chain according to SEQ ID NO: 526 (TPP-20965),
p)根据SEQ ID NO:543的重链和根据SEQ ID NO:544的轻链(TPP-21045),p) The heavy chain according to SEQ ID NO: 543 and the light chain according to SEQ ID NO: 544 (TPP-21045),
q)根据SEQ ID NO:561的重链和根据SEQ ID NO:562的轻链(TPP-21047),q) The heavy chain according to SEQ ID NO: 561 and the light chain according to SEQ ID NO: 562 (TPP-21047),
r)根据SEQ ID NO:579的重链和根据SEQ ID NO:580的轻链(TPP-21181),r) The heavy chain according to SEQ ID NO: 579 and the light chain according to SEQ ID NO: 580 (TPP-21181),
s)根据SEQ ID NO:597的重链和根据SEQ ID NO:598的轻链(TPP-21183),s) the heavy chain according to SEQ ID NO: 597 and the light chain according to SEQ ID NO: 598 (TPP-21183),
t)根据SEQ ID NO:615的重链和根据SEQ ID NO:616的轻链(TPP-21360),t) The heavy chain according to SEQ ID NO: 615 and the light chain according to SEQ ID NO: 616 (TPP-21360),
u)根据SEQ ID NO:633的重链和根据SEQ ID NO:634的轻链(TPP-23411),u) The heavy chain according to SEQ ID NO: 633 and the light chain according to SEQ ID NO: 634 (TPP-23411),
v)根据SEQ ID NO:676的重链和根据SEQ ID NO:677的轻链(TPP-29596),v) The heavy chain according to SEQ ID NO: 676 and the light chain according to SEQ ID NO: 677 (TPP-29596),
w)根据SEQ ID NO:696的重链和根据SEQ ID NO:697的轻链(TPP-29597),w) The heavy chain according to SEQ ID NO: 696 and the light chain according to SEQ ID NO: 697 (TPP-29597),
x)根据SEQ ID NO:718的重链和根据SEQ ID NO:719的轻链(TPP-18429),x) The heavy chain according to SEQ ID NO: 718 and the light chain according to SEQ ID NO: 719 (TPP-18429),
y)根据SEQ ID NO:738的重链和根据SEQ ID NO:739的轻链(TPP-18430),y) the heavy chain according to SEQ ID NO: 738 and the light chain according to SEQ ID NO: 739 (TPP-18430),
z)根据SEQ ID NO:758的重链和根据SEQ ID NO:759的轻链(TPP-18432),z) The heavy chain according to SEQ ID NO: 758 and the light chain according to SEQ ID NO: 759 (TPP-18432),
aa)根据SEQ ID NO:778的重链和根据SEQ ID NO:779的轻链(TPP-18433),aa) The heavy chain according to SEQ ID NO: 778 and the light chain according to SEQ ID NO: 779 (TPP-18433),
bb)根据SEQ ID NO:798的重链和根据SEQ ID NO:799的轻链(TPP-18436),bb) the heavy chain according to SEQ ID NO: 798 and the light chain according to SEQ ID NO: 799 (TPP-18436),
cc)根据SEQ ID NO:818的重链和根据SEQ ID NO:819的轻链(TPP-19571),cc) the heavy chain according to SEQ ID NO: 818 and the light chain according to SEQ ID NO: 819 (TPP-19571),
dd)根据SEQ ID NO:842的重链和根据SEQ ID NO:843的轻链(TPP-27477),(dd) The heavy chain according to SEQ ID NO: 842 and the light chain according to SEQ ID NO: 843 (TPP-27477),
ee)根据SEQ ID NO:862的重链和根据SEQ ID NO:863的轻链(TPP-27478),(ee) The heavy chain according to SEQ ID NO: 862 and the light chain according to SEQ ID NO: 863 (TPP-27478),
ff)根据SEQ ID NO:882的重链和根据SEQ ID NO:883的轻链(TPP-27479),ff) The heavy chain according to SEQ ID NO: 882 and the light chain according to SEQ ID NO: 883 (TPP-27479),
gg)根据SEQ ID NO:902的重链和根据SEQ ID NO:903的轻链(TPP-27480),(gg) The heavy chain according to SEQ ID NO: 902 and the light chain according to SEQ ID NO: 903 (TPP-27480),
hh)根据SEQ ID NO:922的重链和根据SEQ ID NO:923的轻链(TPP-29367),(hh) The heavy chain according to SEQ ID NO: 922 and the light chain according to SEQ ID NO: 923 (TPP-29367),
ii)根据SEQ ID NO:942的重链和根据SEQ ID NO:943的轻链(TPP-29368),或ii) The heavy chain according to SEQ ID NO: 942 and the light chain according to SEQ ID NO: 943 (TPP-29368), or
jj)根据SEQ ID NO:962的重链和根据SEQ ID NO:963的轻链(TPP_29369)。jj) The heavy chain according to SEQ ID NO: 962 and the light chain according to SEQ ID NO: 963 (TPP_29369).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains...
a)根据SEQ ID NO:273的重链和根据SEQ ID NO:274的轻链(TPP-16966),a) The heavy chain according to SEQ ID NO: 273 and the light chain according to SEQ ID NO: 274 (TPP-16966),
b)根据SEQ ID NO:291的重链和根据SEQ ID NO:292的轻链(TPP_17575),b) The heavy chain according to SEQ ID NO: 291 and the light chain according to SEQ ID NO: 292 (TPP_17575),
c)根据SEQ ID NO:309的重链和根据SEQ ID NO:310的轻链(TPP_17576),c) The heavy chain according to SEQ ID NO: 309 and the light chain according to SEQ ID NO: 310 (TPP_17576),
d)根据SEQ ID NO:327的重链和根据SEQ ID NO:328的轻链(TPP-17577),d) The heavy chain according to SEQ ID NO: 327 and the light chain according to SEQ ID NO: 328 (TPP-17577),
e)根据SEQ ID NO:345的重链和根据SEQ ID NO:346的轻链(TPP-17578),e) The heavy chain according to SEQ ID NO: 345 and the light chain according to SEQ ID NO: 346 (TPP-17578),
f)根据SEQ ID NO:363的重链和根据SEQ ID NO:364的轻链(TPP-17579),f) The heavy chain according to SEQ ID NO: 363 and the light chain according to SEQ ID NO: 364 (TPP-17579),
g)根据SEQ ID NO:381的重链和根据SEQ ID NO:382的轻链(TPP-17580),g) The heavy chain according to SEQ ID NO: 381 and the light chain according to SEQ ID NO: 382 (TPP-17580),
h)根据SEQ ID NO:399的重链和根据SEQ ID NO:400的轻链(TPP-17581),h) The heavy chain according to SEQ ID NO: 399 and the light chain according to SEQ ID NO: 400 (TPP-17581),
i)根据SEQ ID NO:417的重链和根据SEQ ID NO:418的轻链(TPP-18205),i) The heavy chain according to SEQ ID NO: 417 and the light chain according to SEQ ID NO: 418 (TPP-18205),
j)根据SEQ ID NO:435的重链和根据SEQ ID NO:436的轻链(TPP-18206),j) The heavy chain according to SEQ ID NO: 435 and the light chain according to SEQ ID NO: 436 (TPP-18206),
k)根据SEQ ID NO:453的重链和根据SEQ ID NO:454的轻链(TPP-18207),k) The heavy chain according to SEQ ID NO: 453 and the light chain according to SEQ ID NO: 454 (TPP-18207),
l)根据SEQ ID NO:471的重链和根据SEQ ID NO:472的轻链(TPP-19546),l) The heavy chain according to SEQ ID NO: 471 and the light chain according to SEQ ID NO: 472 (TPP-19546),
m)根据SEQ ID NO:489的重链和根据SEQ ID NO:490的轻链(TPP-20950),m) The heavy chain according to SEQ ID NO: 489 and the light chain according to SEQ ID NO: 490 (TPP-20950),
n)根据SEQ ID NO:507的重链和根据SEQ ID NO:508的轻链(TPP_20955),n) The heavy chain according to SEQ ID NO: 507 and the light chain according to SEQ ID NO: 508 (TPP_20955),
o)根据SEQ ID NO:525的重链和根据SEQ ID NO:526的轻链(TPP-20965),o) The heavy chain according to SEQ ID NO: 525 and the light chain according to SEQ ID NO: 526 (TPP-20965),
p)根据SEQ ID NO:543的重链和根据SEQ ID NO:544的轻链(TPP-21045),p) The heavy chain according to SEQ ID NO: 543 and the light chain according to SEQ ID NO: 544 (TPP-21045),
q)根据SEQ ID NO:561的重链和根据SEQ ID NO:562的轻链(TPP-21047),q) The heavy chain according to SEQ ID NO: 561 and the light chain according to SEQ ID NO: 562 (TPP-21047),
r)根据SEQ ID NO:579的重链和根据SEQ ID NO:580的轻链(TPP-21181),r) The heavy chain according to SEQ ID NO: 579 and the light chain according to SEQ ID NO: 580 (TPP-21181),
s)根据SEQ ID NO:597的重链和根据SEQ ID NO:598的轻链(TPP-21183),s) the heavy chain according to SEQ ID NO: 597 and the light chain according to SEQ ID NO: 598 (TPP-21183),
t)根据SEQ ID NO:615的重链和根据SEQ ID NO:616的轻链(TPP-21360),t) The heavy chain according to SEQ ID NO: 615 and the light chain according to SEQ ID NO: 616 (TPP-21360),
u)根据SEQ ID NO:633的重链和根据SEQ ID NO:634的轻链(TPP-23411),u) The heavy chain according to SEQ ID NO: 633 and the light chain according to SEQ ID NO: 634 (TPP-23411),
v)根据SEQ ID NO:676的重链和根据SEQ ID NO:677的轻链(TPP-29596),v) The heavy chain according to SEQ ID NO: 676 and the light chain according to SEQ ID NO: 677 (TPP-29596),
w)根据SEQ ID NO:696的重链和根据SEQ ID NO:697的轻链(TPP-29597),w) The heavy chain according to SEQ ID NO: 696 and the light chain according to SEQ ID NO: 697 (TPP-29597),
x)根据SEQ ID NO:718的重链和根据SEQ ID NO:719的轻链(TPP-18429),x) The heavy chain according to SEQ ID NO: 718 and the light chain according to SEQ ID NO: 719 (TPP-18429),
y)根据SEQ ID NO:738的重链和根据SEQ ID NO:739的轻链(TPP-18430),y) the heavy chain according to SEQ ID NO: 738 and the light chain according to SEQ ID NO: 739 (TPP-18430),
z)根据SEQ ID NO:758的重链和根据SEQ ID NO:759的轻链(TPP-18432),z) The heavy chain according to SEQ ID NO: 758 and the light chain according to SEQ ID NO: 759 (TPP-18432),
aa)根据SEQ ID NO:778的重链和根据SEQ ID NO:779的轻链(TPP-18433),aa) The heavy chain according to SEQ ID NO: 778 and the light chain according to SEQ ID NO: 779 (TPP-18433),
bb)根据SEQ ID NO:798的重链和根据SEQ ID NO:799的轻链(TPP-18436),bb) the heavy chain according to SEQ ID NO: 798 and the light chain according to SEQ ID NO: 799 (TPP-18436),
cc)根据SEQ ID NO:818的重链和根据SEQ ID NO:819的轻链(TPP-19571),cc) the heavy chain according to SEQ ID NO: 818 and the light chain according to SEQ ID NO: 819 (TPP-19571),
dd)根据SEQ ID NO:842的重链和根据SEQ ID NO:843的轻链(TPP-27477),(dd) The heavy chain according to SEQ ID NO: 842 and the light chain according to SEQ ID NO: 843 (TPP-27477),
ee)根据SEQ ID NO:862的重链和根据SEQ ID NO:863的轻链(TPP-27478),(ee) The heavy chain according to SEQ ID NO: 862 and the light chain according to SEQ ID NO: 863 (TPP-27478),
ff)根据SEQ ID NO:882的重链和根据SEQ ID NO:883的轻链(TPP-27479),ff) The heavy chain according to SEQ ID NO: 882 and the light chain according to SEQ ID NO: 883 (TPP-27479),
gg)根据SEQ ID NO:902的重链和根据SEQ ID NO:903的轻链(TPP-27480),(gg) The heavy chain according to SEQ ID NO: 902 and the light chain according to SEQ ID NO: 903 (TPP-27480),
hh)根据SEQ ID NO:922的重链和根据SEQ ID NO:923的轻链(TPP-29367),(hh) The heavy chain according to SEQ ID NO: 922 and the light chain according to SEQ ID NO: 923 (TPP-29367),
ii)根据SEQ ID NO:942的重链和根据SEQ ID NO:943的轻链(TPP-29368),或ii) The heavy chain according to SEQ ID NO: 942 and the light chain according to SEQ ID NO: 943 (TPP-29368), or
jj)根据SEQ ID NO:962的重链和根据SEQ ID NO:963的轻链(TPP-29369)。jj) The heavy chain according to SEQ ID NO: 962 and the light chain according to SEQ ID NO: 963 (TPP-29369).
根据当前方面还提供了多种抗体,其包含随序列表提供的抗CCR8抗体的CDR的随机排列。The present invention also provides a variety of antibodies, which contain a random arrangement of CDRs of anti-CCR8 antibodies provided with the sequence listing.
优选地,根据当前方面的抗体或抗原结合片段是无岩藻糖基化的,如本文别处所述。优选地,根据当前方面的抗体或抗原结合片段诱导ADCC和/或ADCP,如本文别处所述。优选地,根据当前方面的抗体或抗原结合片段是非内化或低内化抗体,如本文别处所述。Preferably, the antibody or antigen-binding fragment according to the present aspect is unfucosylated, as described elsewhere herein. Preferably, the antibody or antigen-binding fragment according to the present aspect induces ADCC and/or ADCP, as described elsewhere herein. Preferably, the antibody or antigen-binding fragment according to the present aspect is a non-internalizing or low-internalizing antibody, as described elsewhere herein.
方面18-抗鼠CCR8抗体(序列定义)Aspect 18 - Anti-mouse CCR8 antibody (sequence definition)
根据第十八方面,其可以与第六、第七、第八、第九、第十、第十一、第十二、第十三、第十四、第十五和/或第十六方面相同或不同,提供了分离的抗CCR8抗体或其抗原结合片段。优选地,根据当前方面的抗体结合鼠CCR8,特别是结合根据SEQ ID NO:45和/或SEQ IDNO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。根据当前方面的抗体的CDRs优选地是人来源的CDRs。此外,抗体的特征在于使它们特别适用于治疗的特性,例如是根据方面7、8、9、10、11、12、13、14、15或16中至少一个或多个方面的抗体。总之,根据当前方面的抗体可用作识别鼠CCR8的替代抗体并且具有如所讨论的优越的治疗特性,例如在实施例12中。According to aspect eighteen, which may be the same as or different from aspects six, seven, eight, nine, ten, eleven, twelfth, thirteenth, fourteenth, fifteenth and/or sixteen, an isolated anti-CCR8 antibody or its antigen-binding fragment is provided. Preferably, the antibody according to the present aspect binds to mouse CCR8, particularly to the isolated polypeptide according to SEQ ID NO: 45 and/or SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated. The CDRs of the antibody according to the present aspect are preferably human-derived CDRs. Furthermore, the antibodies are characterized by properties that make them particularly suitable for treatment, for example, antibodies according to at least one or more of aspects 7, 8, 9, 10, 11, 12, 13, 14, 15 or 16. In summary, the antibody according to the present aspect can be used as an alternative antibody for recognizing mouse CCR8 and has the superior therapeutic properties as discussed, for example in Example 12.
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含至少一个、两个、三个、四个、五个或六个与以下序列具有至少90%、95%、98%或100%序列同一性的CDR序列:According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains at least one, two, three, four, five, or six CDR sequences having at least 90%, 95%, 98%, or 100% sequence identity with the following sequences:
a)SEQ ID NO:202,SEQ ID NO:203,SEQ ID NO:204,SEQ ID NO:206,SEQ ID NO:207和SEQ ID NO:208(TPP-14095),a) SEQ ID NO: 202, SEQ ID NO: 203, SEQ ID NO: 204, SEQ ID NO: 206, SEQ ID NO: 207 and SEQ ID NO: 208 (TPP-14095),
b)SEQ ID NO:216,SEQ ID NO:217,SEQ ID NO:218,SEQ ID NO:220,SEQ ID NO:221或SEQ ID NO:222(TPP-14099),b) SEQ ID NO: 216, SEQ ID NO: 217, SEQ ID NO: 218, SEQ ID NO: 220, SEQ ID NO: 221 or SEQ ID NO: 222 (TPP-14099),
c)SEQ ID NO:230,SEQ ID NO:231,SEQ ID NO:232,SEQ ID NO:234,SEQ ID NO:235和SEQ ID NO:236(TPP-15285),或c) SEQ ID NO: 230, SEQ ID NO: 231, SEQ ID NO: 232, SEQ ID NO: 234, SEQ ID NO: 235 and SEQ ID NO: 236 (TPP-15285), or
d)SEQ ID NO:244,SEQ ID NO:245,SEQ ID NO:246,SEQ ID NO:248,SEQ ID NO:249和SEQ ID NO:250(TPP-15286)。d) SEQ ID NO: 244, SEQ ID NO: 245, SEQ ID NO: 246, SEQ ID NO: 248, SEQ ID NO: 249 and SEQ ID NO: 250 (TPP-15286).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与SEQ IDNO:204、SEQ ID NO:218、SEQ ID NO:232或SEQ ID NO:246中的任一具有至少90%、95%、98%或100%序列同一性的HCDR3序列。According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains an HCDR3 sequence having at least 90%, 95%, 98%, or 100% sequence identity with any of SEQ ID NO: 204, SEQ ID NO: 218, SEQ ID NO: 232, or SEQ ID NO: 246.
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含以下的至少一个、两个、优选地三个、四个、五个或六个CDR序列,According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains at least one, two, preferably three, four, five, or six CDR sequences.
a)SEQ ID NO:202,SEQ ID NO:203,SEQ ID NO:204,SEQ ID NO:206,SEQ ID NO:207和SEQ ID NO:208(TPP-14095),a) SEQ ID NO: 202, SEQ ID NO: 203, SEQ ID NO: 204, SEQ ID NO: 206, SEQ ID NO: 207 and SEQ ID NO: 208 (TPP-14095),
b)SEQ ID NO:216,SEQ ID NO:217,SEQ ID NO:218,SEQ ID NO:220,SEQ ID NO:221或SEQ ID NO:222(TPP-14099),b) SEQ ID NO: 216, SEQ ID NO: 217, SEQ ID NO: 218, SEQ ID NO: 220, SEQ ID NO: 221 or SEQ ID NO: 222 (TPP-14099),
c)SEQ ID NO:230,SEQ ID NO:231,SEQ ID NO:232,SEQ ID NO:234,SEQ ID NO:235和SEQ ID NO:236(TPP-15285),orc) SEQ ID NO: 230, SEQ ID NO: 231, SEQ ID NO: 232, SEQ ID NO: 234, SEQ ID NO: 235 and SEQ ID NO: 236 (TPP-15285), or
d)SEQ ID NO:244,SEQ ID NO:245,SEQ ID NO:246,SEQ ID NO:248,SEQ ID NO:249和SEQ ID NO:250(TPP-15286),d) SEQ ID NO: 244, SEQ ID NO: 245, SEQ ID NO: 246, SEQ ID NO: 248, SEQ ID NO: 249 and SEQ ID NO: 250 (TPP-15286),
任选地,至多一个、两个、三个、四个或五个突变已被引入至少一个CDR。Optionally, at most one, two, three, four or five mutations have been introduced into at least one CDR.
例如,酪氨酸可以与带正电荷的氨基酸如组氨酸交换,反之亦然。例如,带正电荷的氨基酸可以与不同的带正电荷的氨基酸交换,带负电荷的氨基酸可以与不同的带负电荷的氨基酸交换,极性氨基酸可以与不同的极性氨基酸交换,极性不带电氨基酸可以与不同极性不带电氨基酸交换,小氨基酸可以与不同小氨基酸交换,两性氨基酸可以与不同两性氨基酸交换,芳香族氨基酸可以与不同的芳香族氨基酸交换。如技术人员所理解的,具体地不改变抗体与CCR8的硫酸化TRD之间的特异性相互作用的那些氨基酸交换是可能的。引入组氨酸的氨基酸交换是优选的。For example, tyrosine can be exchanged with positively charged amino acids such as histidine, and vice versa. Similarly, positively charged amino acids can be exchanged with different positively charged amino acids, negatively charged amino acids with different negatively charged amino acids, polar amino acids with different polar amino acids, polar uncharged amino acids with different polar uncharged amino acids, small amino acids with different small amino acids, amphoteric amino acids with different amphoteric amino acids, and aromatic amino acids with different aromatic amino acids. As understood by those skilled in the art, it is possible to exchange amino acids that do not alter the specific interaction between the antibody and the sulfated TRD of CCR8. Introducing histidine-based amino acid exchanges is preferred.
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与以下具有至少90%、95%、98%或100%序列同一性的可变重链序列和/或可变轻链序列According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment comprises a variable heavy chain sequence and/or a variable light chain sequence having at least 90%, 95%, 98%, or 100% sequence identity with the following sequences.
a)根据SEQ ID NO:201的可变重链序列和根据SEQ ID NO:205的可变轻链序列(TPP-14095),a) Based on the variable heavy chain sequence of SEQ ID NO: 201 and the variable light chain sequence (TPP-14095) of SEQ ID NO: 205,
b)根据SEQ ID NO:215的可变重链序列和根据SEQ ID NO:219的可变轻链序列(TPP-14099),b) Based on the variable heavy chain sequence of SEQ ID NO: 215 and the variable light chain sequence (TPP-14099) of SEQ ID NO: 219,
c)根据SEQ ID NO:229的可变重链序列和根据SEQ ID NO:233的可变轻链序列(TPP-15285),或c) The variable heavy chain sequence according to SEQ ID NO: 229 and the variable light chain sequence (TPP-15285) according to SEQ ID NO: 233, or
d)根据SEQ ID NO:243的可变重链序列和根据SEQ ID NO:247的可变轻链序列(TPP-15286)。d) The variable heavy chain sequence according to SEQ ID NO: 243 and the variable light chain sequence according to SEQ ID NO: 247 (TPP-15286).
根据一些优选的实施方式,抗CCR8抗体或其抗原结合片段包含e)根据SEQ ID NO:201的可变重链序列和根据SEQ ID NO:205的可变轻链序列(TPP-14095),According to some preferred embodiments, the anti-CCR8 antibody or its antigen-binding fragment comprises e) the variable heavy chain sequence according to SEQ ID NO: 201 and the variable light chain sequence (TPP-14095) according to SEQ ID NO: 205.
f)根据SEQ ID NO:215的可变重链序列和根据SEQ ID NO:219的可变轻链序列(TPP-14099),f) The variable heavy chain sequence according to SEQ ID NO: 215 and the variable light chain sequence (TPP-14099) according to SEQ ID NO: 219.
g)根据SEQ ID NO:229的可变重链序列和根据SEQ ID NO:233的可变轻链序列(TPP-15285),或g) The variable heavy chain sequence according to SEQ ID NO: 229 and the variable light chain sequence (TPP-15285) according to SEQ ID NO: 233, or
h)根据SEQ ID NO:243的可变重链序列和根据SEQ ID NO:247的可变轻链序列(TPP-15286)。h) The variable heavy chain sequence according to SEQ ID NO: 243 and the variable light chain sequence according to SEQ ID NO: 247 (TPP-15286).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含与以下序列具有至少90%、95%、98%或100%序列同一性的重链序列和/或轻链序列According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment comprises a heavy chain sequence and/or a light chain sequence having at least 90%, 95%, 98%, or 100% sequence identity with the following sequences.
a)根据SEQ ID NO:211的重链和/或根据SEQ ID NO:212的轻链(TPP-14095),a) The heavy chain according to SEQ ID NO: 211 and/or the light chain according to SEQ ID NO: 212 (TPP-14095),
b)根据SEQ ID NO:225的重链和/或根据SEQ ID NO:226的轻链(TPP-14099),b) The heavy chain according to SEQ ID NO: 225 and/or the light chain according to SEQ ID NO: 226 (TPP-14099),
c)根据SEQ ID NO:239的重链和/或根据SEQ ID NO:240的轻链(TPP-15285),或c) The heavy chain according to SEQ ID NO: 239 and/or the light chain according to SEQ ID NO: 240 (TPP-15285), or
d)根据SEQ ID NO:253的重链和/或根据SEQ ID NO:254的轻链(TPP-15286)。d) The heavy chain according to SEQ ID NO: 253 and/or the light chain according to SEQ ID NO: 254 (TPP-15286).
根据一些优选的实施方式,分离的抗CCR8抗体或其抗原结合片段包含According to some preferred embodiments, the isolated anti-CCR8 antibody or its antigen-binding fragment contains...
a)根据SEQ ID NO:211的重链和/或根据SEQ ID NO:212的轻链(TPP-14095),a) The heavy chain according to SEQ ID NO: 211 and/or the light chain according to SEQ ID NO: 212 (TPP-14095),
b)根据SEQ ID NO:225的重链和/或根据SEQ ID NO:226的轻链(TPP-14099),b) The heavy chain according to SEQ ID NO: 225 and/or the light chain according to SEQ ID NO: 226 (TPP-14099),
c)根据SEQ ID NO:239的重链和/或根据SEQ ID NO:240的轻链(TPP-15285),或c) The heavy chain according to SEQ ID NO: 239 and/or the light chain according to SEQ ID NO: 240 (TPP-15285), or
d)根据SEQ ID NO:253的重链和/或根据SEQ ID NO:254的轻链(TPP-15286)。d) The heavy chain according to SEQ ID NO: 253 and/or the light chain according to SEQ ID NO: 254 (TPP-15286).
根据“所有方面”的优选的组合Based on the preferred combination of "all aspects"
以下是方面6、7、8、9、10、11、12、13、14、15、16、17和18(根据本节的“所有方面”)的特别优选的方面。The following are particularly preferred aspects of aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and 18 (according to “All Aspects” in this section).
在所有方面的优选实施方式下,抗体或抗原结合片段、分离的抗体或其抗原结合片段特异性结合CCR8的富含硫酸化酪氨酸的结构域。在所有方面的优选实施方式中,抗体或抗原结合片段的特征在于HCDR3区包含10%至34%的酪氨酸和/或2%至20%的组氨酸。在所有方面的优选实施方式中,抗体或抗原结合片段是非内化的或特征在于以低于同种型对照的内化的1.5、2、3、4、5、6、7、或10倍内化进入具有内源靶标表达的细胞。In all preferred embodiments, the antibody or antigen-binding fragment, the isolated antibody or its antigen-binding fragment, specifically binds to the sulfated tyrosine-rich domain of CCR8. In all preferred embodiments, the antibody or antigen-binding fragment is characterized in that the HCDR3 region contains 10% to 34% tyrosine and/or 2% to 20% histidine. In all preferred embodiments, the antibody or antigen-binding fragment is non-internalized or characterized in that it internalizes into cells expressing endogenous targets at a rate of 1.5, 2, 3, 4, 5, 6, 7, or 10 times lower than that of isotype controls.
在所有方面的优选实施方式中,抗体或抗原结合片段包含人(衍生的)CDR。例如,抗体可以是人抗人CCR8抗体。在所有方面的优选实施方式中,抗体或抗原结合片段对来自至少两个物种的CCR8具有交叉反应性,优选选自人、猴、猕猴(食蟹猴)、猕猴(恒河猴)、啮齿动物、小鼠、大鼠、马、牛、猪、狗、猫和骆驼,甚至更优选地选自人、食蟹猴和小鼠。根据这些实施方式地一些最优选的实施方式,抗体或抗原结合片段对人和食蟹猴CCR8具有交叉反应性。In all preferred embodiments, the antibody or antigen-binding fragment comprises a human (derived) CDR. For example, the antibody may be a human anti-human CCR8 antibody. In all preferred embodiments, the antibody or antigen-binding fragment is cross-reactive to CCR8 from at least two species, preferably selected from humans, monkeys, macaques (cynomolgus monkeys), rhesus monkeys, rodents, mice, rats, horses, cattle, pigs, dogs, cats, and camels, and even more preferably selected from humans, cynomolgus monkeys, and mice. According to some of the most preferred embodiments of these embodiments, the antibody or antigen-binding fragment is cross-reactive to human and cynomolgus monkey CCR8.
在所有方面的优选实施方式中,抗体或抗原结合片段以第一解离常数KD结合来自第一物种的CCR8并以第二解离常数KD结合来自第二物种的CCR8,其中第一和第二解离常数处于同一数量级。In all preferred embodiments, the antibody or antigen-binding fragment binds to CCR8 from a first species with a first dissociation constant KD and to CCR8 from a second species with a second dissociation constant KD, wherein the first and second dissociation constants are on the same order of magnitude.
在所有方面的优选实施方式中,抗体或抗原结合片段以<5E-8M,<4E-8M,<3E-8M,<2E-8M,<1E-8M,<9E-9M,<8E-9M,<7E-9M,<6E-9M,<5E-9M,<4E-9M,<3E-9M,<2.5E-9M,<2E-9M,<1.5E-9M,<1E-9M,<9E-10M,<8E-10M,<7E-10M,<6E-10M,<5E-10M,<4E-10M,<3E-10M,<2.5E-10M,<2E-10M,<1.5E-10M,<1E-10M,或<9E-11M的KD值结合In all preferred embodiments, the antibody or antigen-binding fragment binds with a KD value of <5E-8M, <4E-8M, <3E-8M, <2E-8M, <1E-8M, <9E-9M, <8E-9M, <7E-9M, <6E-9M, <5E-9M, <4E-9M, <3E-9M, <2.5E-9M, <2E-9M, <1.5E-9M, <1E-9M, <9E-10M, <8E-10M, <7E-10M, <6E-10M, <5E-10M, <4E-10M, <3E-10M, <2.5E-10M, <2E-10M, <1.5E-10M, <1E-10M, or <9E-11M.
a)根据SEQ ID NO:43和/或SEQ ID NO:46的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或a) The polypeptide isolated according to SEQ ID NO: 43 and/or SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
b)根据SEQ ID NO:44和/或SEQ ID NO:47的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) The polypeptide isolated according to SEQ ID NO: 44 and/or SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)根据SEQ ID NO:45和/或SEQ ID NO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。c) The polypeptide isolated according to SEQ ID NO: 45 and/or SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
在所有方面的优选实施方式中,抗体或抗原结合片段(特异性地)以<15nM、<10nM、<5nM、<1nM或<0.6nM的EC50结合In all preferred embodiments, the antibody or antigen-binding fragment (specifically) binds at an EC50 of <15 nM, <10 nM, <5 nM, <1 nM, or <0.6 nM.
a)人CCR8和/或根据SEQ ID NO:43和/或SEQ ID NO:46的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或a) Human CCR8 and/or polypeptides isolated according to SEQ ID NO: 43 and/or SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
b)食蟹猴CCR8和/或根据SEQ ID NO:44和/或SEQ ID NO:47的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) Cynomolgus monkey CCR8 and/or polypeptides isolated according to SEQ ID NO: 44 and/or SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)鼠CCR8和/或根据SEQ ID NO:45和/或SEQ ID NO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,c) Mouse CCR8 and/or polypeptides isolated according to SEQ ID NO: 45 and/or SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
并且任选地以<50nM、<25nM、<15nM或<10nM的EC50与激活的人调节性T细胞结合。It can also optionally bind to activated human regulatory T cells with EC50 values of <50 nM, <25 nM, <15 nM, or <10 nM.
根据这些实施方式中的一些最优选的实施方式,结合人CCR8或根据SEQ ID NO:46的分离的多肽(其中Y3、Y15和Y17中的至少两个或全部已被硫酸化)的抗体或抗原结合片段的EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,并且结合食蟹猴CCR8或根据SEQ ID NO:47的分离的多肽(其中Y3、Y15和Y17的至少两个或所有已被硫酸化)的EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM。According to some of the most preferred embodiments of these embodiments, the EC50 of the antibody or antigen-binding fragment binding to human CCR8 or the isolated polypeptide according to SEQ ID NO: 46 (wherein at least two or all of Y3, Y15 and Y17 have been sulfated) is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM, and the EC50 of the cynomolgus monkey CCR8 or the isolated polypeptide according to SEQ ID NO: 47 (wherein at least two or all of Y3, Y15 and Y17 have been sulfated) is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM.
如例如实施例10.1.1中所公开的,根据本发明的抗体对其各自的靶标具有极好的亲和力。例如,交叉反应抗体TPP-21181、TPP-17578、TPP-19546、TPP-18206、TPP-21360和TPP-23411结合人CCR8,EC50分别为4.8nM、1.7nM、0.8nM、0.6nM、~0.9nM或1.7nM。此外,TPP-21181、TPP-17578、TPP-19546、TPP-18206、TPP-21360和TPP-23411结合食蟹猴CCR8,EC50为1.8nM、1nM、0.5nM、0.7nM、~0.55nM或0.9nM。此外,TPP-17578、TPP-19546、TPP-18206和TPP-21360与人调节性T细胞结合,EC50为25nM、15nM、23nM或10nM。此外,抗鼠CCR8抗体TPP-14099以3nM的EC50结合表达鼠CCR8的CHO细胞和以13.2nM的EC50结合鼠iTreg,参见表10.1.1.5。As disclosed, for example, in Example 10.1.1, the antibodies according to the present invention exhibit excellent affinity for their respective targets. For example, the cross-reactive antibodies TPP-21181, TPP-17578, TPP-19546, TPP-18206, TPP-21360, and TPP-23411 bind to human CCR8 with EC50 values of 4.8 nM, 1.7 nM, 0.8 nM, 0.6 nM, ~0.9 nM, or 1.7 nM, respectively. Furthermore, TPP-21181, TPP-17578, TPP-19546, TPP-18206, TPP-21360, and TPP-23411 bind to cynomolgus monkey CCR8 with EC50 values of 1.8 nM, 1 nM, 0.5 nM, 0.7 nM, ~0.55 nM, or 0.9 nM. In addition, TPP-17578, TPP-19546, TPP-18206, and TPP-21360 bind to human regulatory T cells with EC50 values of 25 nM, 15 nM, 23 nM, or 10 nM, respectively. Furthermore, the anti-mouse CCR8 antibody TPP-14099 binds to CHO cells expressing mouse CCR8 with an EC50 of 3 nM and to mouse iTreg cells with an EC50 of 13.2 nM (see Table 10.1.1.5).
在所有方面的优选实施方式中,抗体或抗原结合片段,优选地于浓度为10nM,In all preferred embodiments, the antibody or antigen-binding fragment is preferably at a concentration of 10 nM.
a)不或基本上不或以低于抗体L263G8和433H的程度阻断CCL1诱导的β-arrestin信号传导,和/或a) Does not, substantially does not, or blocks CCL1-induced β-arrestin signaling to a degree less than that of antibodies L263G8 and 433H, and/or
b)不或基本上不或以低于抗体L263G8和433H的程度诱导ERK1/2磷酸化和/或b) Does not, substantially does not, or induces ERK1/2 phosphorylation to a degree less than that of antibodies L263G8 and 433H and/or
c)不或基本上不或以低于抗体L263G8和433H的程度诱导AKT磷酸化。c) AKT phosphorylation is not induced, or is substantially not induced, or is induced to a degree less than that of antibodies L263G8 and 433H.
在所有方面的优选实施方式中,抗体或抗原结合片段阻断趋化因子受体的G蛋白依赖性信号传导。In all preferred embodiments, the antibody or antigen-binding fragment blocks G protein-dependent signaling of the chemokine receptor.
在所有方面的优选实施方式中,抗体或抗原结合片段是无岩藻糖基化的。In all preferred embodiments, the antibody or antigen-binding fragment is unfucosylated.
在所有方面的优选实施方式中,抗体或抗原结合片段In all preferred embodiments, the antibody or antigen-binding fragment
a)以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a),和/或a) Binding to human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) below 530 nM, 500 nM, 450 nM, 400 nM, 300 nM, or 200 nM, and/or
b)以低于30μM、20μM、10μM、5μM或1μM的解离常数(KD)结合人FcγRIIA(CD32a)。b) Bind human FcγRIIA (CD32a) with a dissociation constant (KD) of less than 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
在所有方面的优选实施方式中,抗体或抗原结合片段In all preferred embodiments, the antibody or antigen-binding fragment
a)通过人效应细胞(例如人NK细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和/或a) Inducing antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 via human effector cells (e.g., human NK cells), and/or
b)通过人类效应细胞(例如人类巨噬细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP)。b) Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 via human effector cells (e.g., human macrophages).
在所有方面的优选实施方式中,抗体或抗原结合片段诱导ADCC和/或ADCP并且In all preferred embodiments, the antibody or antigen-binding fragment induces ADCC and/or ADCP and
a)ADCC诱导的激活人调节性T细胞的最大耗竭为至少为30%、40%、50%、60%、70%、80%、90%、95%、98%或99%,和/或a) The maximum exhaustion of ADCC-induced activated human regulatory T cells is at least 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%, and/or
b)ADCP诱导的激活人调节性T细胞的最大耗竭为至少为5%、10%、15%、20%、25%、30%、40%或50%,和/或b) The maximum exhaustion of ADCP-induced activated human regulatory T cells is at least 5%, 10%, 15%, 20%, 25%, 30%, 40%, or 50%, and/or
c)在体外或受试者中,肿瘤内调节性T细胞的最大耗竭为至少为50%、60%、70%、80%、90%、95%或99%。c) The maximum depletion of intratumoral regulatory T cells, either in vitro or in subjects, is at least 50%, 60%, 70%, 80%, 90%, 95%, or 99%.
在所有方面的优选实施方式中,抗体或抗原结合片段的EC50In all preferred embodiments, the EC50 of the antibody or antigen-binding fragment
a)对于ADCC诱导的激活人调节性T细胞的耗竭,低于100pM、50pM、25pM、12.5pM、10pM或5pM和/或a) For ADCC-induced depletion of activated human regulatory T cells, below 100 pM, 50 pM, 25 pM, 12.5 pM, 10 pM or 5 pM and/or
b)对于ADCP诱导的激活人调节性T细胞的耗竭,低于500pM、250pM、200pM、150pM、100pM、75pM、50pM或25pM。b) For ADCP-induced depletion of activated human regulatory T cells, below 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM or 25 pM.
优选地,在所有方面的优选的实施方式中,有效剂量的抗体或抗原结合片段Preferably, in all preferred embodiments, an effective dose of antibody or antigen-binding fragment is used.
a)在体外或受试者中,将激活或肿瘤内调节性T细胞的数量减少到低于30%、25%、20%、10%、5%或1%和/或a) In vitro or in subjects, reducing the number of activated or intratumoral regulatory T cells to less than 30%, 25%, 20%, 10%, 5%, or 1% and/or
b)在体外或受试者中,将肿瘤内CD8+T细胞与肿瘤内Tregs的比率增加至至少5、10、15、20、25、30、40、50、60、70、80、90、100、150、200或更高和/或b) In vitro or in subjects, increasing the ratio of intratumoral CD8+ T cells to intratumoral Tregs to at least 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200 or higher and/or
c)在体外或受试者中,将肿瘤内CD4+T细胞的调节性T细胞的百分比降低至<30%、<20%、<10%或<5%。c) Reduce the percentage of regulatory T cells in tumor CD4+ T cells to <30%, <20%, <10%, or <5% in vitro or in subjects.
在所有方面的优选实施方式中,抗体或抗原结合片段增加限定肿瘤体积中免疫细胞的绝对数量,至少增加1.5、2、2.5、3、3.5或4倍,优选地其中免疫细胞选自In all preferred embodiments, the antibody or antigen-binding fragment increases the absolute number of immune cells in a defined tumor volume by at least 1.5, 2, 2.5, 3, 3.5, or 4 times, preferably wherein the immune cells are selected from...
a)(肿瘤内)CD45+细胞,a) CD45+ cells (within the tumor)
b)(肿瘤内)CD8+T细胞,b) CD8+ T cells (within the tumor)
c)(肿瘤内)CD4+T细胞,c) CD4+ T cells (within the tumor)
d)(肿瘤内)巨噬细胞,例如M1巨噬细胞或M2巨噬细胞,d) Macrophages (within the tumor), such as M1 or M2 macrophages.
e)(肿瘤内)NK细胞,e)(tumor-intratumor) NK cells,
f)(肿瘤内)B细胞,f)(tumor-bearing) B cells,
g)(肿瘤内)树突状细胞,g)(tumor-intratumor) dendritic cells,
h)(肿瘤内)γδT细胞,h)(tumor-intratumoral) γδT cells.
i)(肿瘤内)iNKT细胞,i)(tumor-intratumor) iNKT cells,
或其任何组合。Or any combination thereof.
例如,免疫细胞是For example, immune cells are
a)CD8+T细胞、CD4+T细胞和巨噬细胞,或a) CD8+ T cells, CD4+ T cells, and macrophages, or
b)CD8+T细胞、CD4+T细胞、NK细胞和巨噬细胞,或b) CD8+ T cells, CD4+ T cells, NK cells, and macrophages, or
c)CD8+T细胞、ACOD1+巨噬细胞(M1巨噬细胞)和B细胞。c) CD8+ T cells, ACOD1+ macrophages (M1 macrophages) and B cells.
在所有方面的优选实施方式中,三剂或更多有效剂量的抗体或抗原结合片段在肿瘤中增加In all preferred embodiments, three or more effective doses of the antibody or antigen-binding fragment increase the activity in the tumor.
a)肿瘤内CD8+T细胞的数量至至少150%、200%、250%、300%或350%,a) The number of CD8+ T cells within the tumor is at least 150%, 200%, 250%, 300%, or 350%.
b)肿瘤内CD8+T细胞与肿瘤内调节性T细胞的比率至至少4、5、10、15、20、25、30、40、50、60、70、80、90、100、150,200,或更高,b) The ratio of intratumoral CD8+ T cells to intratumoral regulatory T cells is at least 4, 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200, or higher.
c)肿瘤内巨噬细胞的数量至少2、3、4或5倍,c) The number of macrophages within the tumor is at least 2, 3, 4, or 5 times the normal value.
d)肿瘤内ACOD1+巨噬细胞(M1巨噬细胞)的数量至少2、3、4、5、6、7、8、9或10倍,d) The number of ACOD1+ macrophages (M1 macrophages) within the tumor is at least 2, 3, 4, 5, 6, 7, 8, 9, or 10 times higher.
e)ACOD1+巨噬细胞(M1巨噬细胞)与MRC1+巨噬细胞(M2巨噬细胞)的比率至少1.5、2、3、4、5、10或更高,e) The ratio of ACOD1+ macrophages (M1 macrophages) to MRC1+ macrophages (M2 macrophages) is at least 1.5, 2, 3, 4, 5, 10 or higher.
f)肿瘤内NK细胞的数量至至少140%或200%,f) The number of NK cells within the tumor must be at least 140% or 200%.
g)肿瘤内CD3+T细胞的数量至至少150%、200%、300%或400%,g) The number of CD3+ T cells within the tumor must be at least 150%, 200%, 300%, or 400%.
h)肿瘤内B细胞的数量至少2、5、10、20、30或40倍,h) The number of B cells within the tumor is at least 2, 5, 10, 20, 30, or 40 times greater.
i)肿瘤内CD45+T细胞的数量至至少150%、200%或300%,和/或i) The number of CD45+ T cells within the tumor is at least 150%, 200%, or 300%, and/or
j)肿瘤内CD4+T细胞的数量至至少150%、200%、300%或400%,j) The number of CD4+ T cells within the tumor must be at least 150%, 200%, 300%, or 400%.
优选地其中肿瘤的特征在于肿瘤浸润性淋巴细胞,例如肿瘤浸润性T细胞。Preferably, the tumor is characterized by tumor-infiltrating lymphocytes, such as tumor-infiltrating T cells.
在所有方面的优选实施方式中,抗体或抗原结合片段诱导三级淋巴结构的形成。In all preferred embodiments, the antibody or antigen-binding fragment induces the formation of tertiary lymphoid structures.
在所有方面的优选实施方式中,抗体是IgG抗体,优选地人IgG1或鼠IgG2a。In all preferred embodiments, the antibody is an IgG antibody, preferably human IgG1 or mouse IgG2a.
在所有方面的优选实施方式中,抗体或抗原结合片段以<15nM、<10nM、<5nM、<1nM或<0.6nM的EC50结合In all preferred embodiments, the antibody or antigen-binding fragment binds at an EC50 of <15 nM, <10 nM, <5 nM, <1 nM, or <0.6 nM.
a)人CCR8或根据SEQ ID NO:46的分离多肽,其中Y3、Y15和Y17的至少两个或全部已被硫酸化,和/或a) Human CCR8 or the isolated polypeptide according to SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
b)食蟹猴CCR8或根据SEQ ID NO:47的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b) Cynomolgus monkey CCR8 or the polypeptide isolated according to SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c)鼠CCR8或根据SEQ ID NO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化。c) Mouse CCR8 or a polypeptide isolated according to SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
在所有方面的优选实施方式中,结合人CCR8或根据SEQ ID NO:46的分离的多肽(其中Y3、Y15和Y17中的至少两个或全部已被硫酸化)的抗体或抗原结合片段的EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM,结合食蟹猴CCR8或根据SEQ ID NO:47的分离的多肽(其中Y3、Y15和Y17中至少两个或全部已被硫酸化)的抗体或抗原结合片段的EC50低于10nM、5nM、2.5nM、1nM、0.5nM或0.25nM。In all preferred embodiments, the EC50 of the antibody or antigen-binding fragment binding to human CCR8 or the isolated polypeptide according to SEQ ID NO: 46 (wherein at least two or all of Y3, Y15 and Y17 have been sulfated) is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM, and the EC50 of the antibody or antigen-binding fragment binding to cynomolgus monkey CCR8 or the isolated polypeptide according to SEQ ID NO: 47 (wherein at least two or all of Y3, Y15 and Y17 have been sulfated) is less than 10 nM, 5 nM, 2.5 nM, 1 nM, 0.5 nM or 0.25 nM.
在所有方面的优选的实施方式中,分离的抗体或抗原结合片段以<50nM、<25nM、<15nM或<10nM的EC50与激活的人调节性T细胞结合。In all preferred embodiments, the isolated antibody or antigen-binding fragment binds to activated human regulatory T cells at an EC50 of <50 nM, <25 nM, <15 nM, or <10 nM.
在所有方面的优选的实施方式中,抗体结合第一分离的非硫酸化多肽的解离常数高于100nM、150nM、200nM、250nM、300nM、350nM、400nM、450nM、500nM,600nM,700nM,800nM,900nM,1μM,1.25μM,1.5μM,1.75μM,2μM,2.25μM,2.5μM,2.75μM,或3μM,或检测不到。优选地,抗体结合第一分离的非硫酸化多肽的解离常数高于100nM、250nM、500nM、1μM、2μM或3μM,或者不可检测。In all preferred embodiments, the dissociation constant of the antibody binding to the first isolated non-sulfated peptide is higher than 100 nM, 150 nM, 200 nM, 250 nM, 300 nM, 350 nM, 400 nM, 450 nM, 500 nM, 600 nM, 700 nM, 800 nM, 900 nM, 1 μM, 1.25 μM, 1.5 μM, 1.75 μM, 2 μM, 2.25 μM, 2.5 μM, 2.75 μM, or 3 μM, or undetectable. Preferably, the dissociation constant of the antibody binding to the first isolated non-sulfated peptide is higher than 100 nM, 250 nM, 500 nM, 1 μM, 2 μM, or 3 μM, or undetectable.
“所有方面”的最优选组合The optimal combination of "all aspects"
根据优选的实施方式I,提供一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段是非内化的或特征在于以低于同种型对照内化的1.5、2、3、4、5、6、7或10倍内化进入具有内源靶标表达的细胞。According to preferred embodiment I, a separated antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment is non-internalized or characterized by internalization into cells expressing endogenous targets at a rate of 1.5, 2, 3, 4, 5, 6, 7 or 10 times lower than that of isotype control internalization.
根据优选的实施方式II,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或片段的特征在于HCDR3区包含10至34%的酪氨酸和/或2至20%的组氨酸。According to preferred embodiment II, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or fragment is characterized in that the HCDR3 region contains 10 to 34% tyrosine and/or 2 to 20% histidine.
根据优选的实施方式III,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体包含人源CDR。According to preferred embodiment III, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody comprises a human CDR.
根据优选的实施方式IV,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段对来自至少两个物种(优选地选自人、食蟹猴和小鼠)的CCR8具有交叉反应性,最优选地,其中抗体或抗原结合片段对人和食蟹猴CCR8具有交叉反应性。According to preferred embodiment IV, a separate antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment is cross-reactive to CCR8 from at least two species (preferably selected from humans, cynomolgus monkeys, and mice), and most preferably, wherein the antibody or antigen-binding fragment is cross-reactive to human and cynomolgus monkey CCR8.
根据优选的实施方式V,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段,According to preferred embodiment V, a separated antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment,
a.不阻断CCL1诱导的β-arrestin信号传导和/或a. Does not block CCL1-induced β-arrestin signaling and/or
b.不诱导ERK1/2磷酸化和/或b. Does not induce ERK1/2 phosphorylation and/or
c.不诱导AKT磷酸化。c. Does not induce AKT phosphorylation.
根据优选的实施方式VI,提供了一种特异性结合CCR8的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段是非岩藻糖基化的并且According to preferred embodiment VI, a separated antibody or antigen-binding fragment thereof that specifically binds to CCR8 is provided, wherein the antibody or antigen-binding fragment is non-fucosylated and
a.通过人效应细胞例如人NK细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和a. Induction of antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 by human effector cells, such as human NK cells, and
b.通过人效应细胞例如人巨噬细胞在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP),b. Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 using human effector cells, such as human macrophages.
c.其中最大的ADCC和ADCP诱导的表达人CCR8的靶细胞的体外耗竭为至少30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%或99%。c. The in vitro depletion of target cells expressing human CCR8 induced by the largest ADCC and ADCP was at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99%.
根据优选的实施方式VII,提供了根据优选的实施方式II至VI中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段是非内化的或特征在于以低于同种型对照内化的1.5、2、3、4、5、6、7或10倍内化进入具有内源靶标表达的细胞。According to preferred embodiment VII, an isolated antibody or antigen-binding fragment according to any one of preferred embodiments II to VI is provided, wherein the antibody or antigen-binding fragment is non-internalized or characterized by internalization into cells expressing endogenous targets at a rate of 1.5, 2, 3, 4, 5, 6, 7 or 10 times lower than that of the isotype control.
根据优选的实施方式VIII,提供了根据优选的实施方式I或III至VII中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段的特征在于HCDR3区包含10至34%的酪氨酸和/或2至20%的组氨酸。According to preferred embodiment VIII, an isolated antibody or antigen-binding fragment according to any one of preferred embodiments I or III to VII is provided, wherein the antibody or antigen-binding fragment is characterized in that the HCDR3 region contains 10 to 34% tyrosine and/or 2 to 20% histidine.
根据优选的实施方式IX,提供了根据优选的实施方式I至II或IV至VIII中任一项的分离的抗体或抗原结合片段,其中抗体包含人来源的CDR。According to preferred embodiment IX, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to II or IV to VIII is provided, wherein the antibody comprises a human-derived CDR.
根据优选的实施方式X,提供了根据优选的实施方式I至III或V至IX中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段对来自至少两个物种(优选地选自人、食蟹猴和小鼠)的CCR8具有交叉反应性,最优选其中抗体或抗原结合片段对人和猕猴CCR8具有交叉反应性。According to preferred embodiment X, an isolated antibody or antigen-binding fragment is provided according to any one of preferred embodiments I to III or V to IX, wherein the antibody or antigen-binding fragment is cross-reactive to CCR8 from at least two species (preferably selected from humans, cynomolgus monkeys and mice), and most preferably wherein the antibody or antigen-binding fragment is cross-reactive to human and macaque CCR8.
根据优选的实施方式XI,提供了根据优选的实施方式I至X中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段以第一解离常数KD结合来自第一物种的CCR8并以第二解离常数KD结合来自具有第二物种的CCR8,其中第一和第二解离常数处于相同数量级。According to preferred embodiment XI, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to X is provided, wherein the antibody or antigen-binding fragment binds to CCR8 from a first species with a first dissociation constant KD and binds to CCR8 from a second species with a second dissociation constant KD, wherein the first and second dissociation constants are of the same order of magnitude.
根据优选的实施方式XII,提供了根据优选的实施方式I至IV或VI至XI中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段,According to preferred embodiment XII, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to IV or VI to XI is provided, wherein the antibody or antigen-binding fragment,
a.不阻断CCL1诱导的β-arrestin信号传导和/或a. Does not block CCL1-induced β-arrestin signaling and/or
b.不诱导ERK1/2磷酸化和/或b. Does not induce ERK1/2 phosphorylation and/or
c.不诱导AKT磷酸化。c. Does not induce AKT phosphorylation.
根据优选的实施方式XIII,提供了根据优选的实施方式I至V或VII至XII中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段According to preferred embodiment XIII, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to V or VII to XII is provided, wherein the antibody or antigen-binding fragment
a.通过人效应细胞(例如人NK细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和a. Induction of antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 using human effector cells (e.g., human NK cells), and
b.通过人效应细胞(例如人类巨噬细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP),和任选地b. Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 via human effector cells (e.g., human macrophages), and optionally...
c.其中最大的ADCC和ADCP诱导的表达人CCR8的靶细胞的体外耗竭为至少30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%或99%。c. The in vitro depletion of target cells expressing human CCR8 induced by the largest ADCC and ADCP was at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99%.
根据优选的实施方式XIV,提供了根据优选的实施方式I至XIII中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段特异性结合CCR8的富含硫酸化酪氨酸的结构域。According to preferred embodiment XIV, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to XIII is provided, wherein the antibody or antigen-binding fragment specifically binds to the sulfated tyrosine-rich domain of CCR8.
根据优选的实施方式XV,提供了根据优选的实施方式I至XIV中任一项的分离的抗体或抗原结合片段,其中抗体或抗原结合片段特异性(i)以EC50<15nM,<10nM,<5nM,<1nM或<0.6nM结合According to preferred embodiment XV, an isolated antibody or antigen-binding fragment according to any one of preferred embodiments I to XIV is provided, wherein the antibody or antigen-binding fragment specifically (i) binds with an EC50 of <15 nM, <10 nM, <5 nM, <1 nM, or <0.6 nM.
a.人CCR8和/或根据SEQ ID NO:46的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或a. Human CCR8 and/or the polypeptide isolated according to SEQ ID NO: 46, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
b.食蟹猴CCR8和/或根据SEQ ID NO:47的分离的多肽,其中Y3、Y15和Y17中的至少两个或全部已被硫酸化,和/或b. Cynomolgus monkey CCR8 and/or the polypeptide isolated according to SEQ ID NO: 47, wherein at least two or all of Y3, Y15 and Y17 have been sulfated, and/or
c.鼠CCR8和/或根据SEQ ID NO:48的分离的多肽,其中Y3、Y14和Y15中的至少两个或全部已被硫酸化,c. Mouse CCR8 and/or the polypeptide isolated according to SEQ ID NO: 48, wherein at least two or all of Y3, Y14 and Y15 have been sulfated.
和/或(ii)以EC50<50nM、<25nM、<15nM或<10nM结合激活的人调节性T细胞。and/or (ii) human regulatory T cells activated with EC50 < 50 nM, < 25 nM, < 15 nM or < 10 nM.
根据优选的实施方式XVI,提供了根据优选的实施方式I至XV中任一项的分离的抗体或其抗原结合片段,According to preferred embodiment XVI, an isolated antibody or antigen-binding fragment thereof according to any one of preferred embodiments I to XV is provided.
a.其中抗体或抗原结合片段以低于530nM、500nM、450nM、400nM、300nM或200nM的解离常数(KD)结合人Fcγ受体IIIA变体V176(CD16a),和/或a. Wherein the antibody or antigen-binding fragment binds to human Fcγ receptor IIIA variant V176 (CD16a) with a dissociation constant (KD) of less than 530 nM, 500 nM, 450 nM, 400 nM, 300 nM or 200 nM, and/or
b.其中抗体或抗原结合片段以低于30μM、20μM、10μM、5μM或1μM的解离常数(KD)结合人FcγRIIA(CD32a)。b. The antibody or antigen-binding fragment binds to human FcγRIIA (CD32a) with a dissociation constant (KD) of less than 30 μM, 20 μM, 10 μM, 5 μM or 1 μM.
根据优选的实施方式XVII,提供了根据优选的实施方式I至XVI中任一项的分离的抗体或其抗原结合片段,其中抗体或抗原结合片段是无岩藻糖基化的。According to preferred embodiment XVII, an isolated antibody or antigen-binding fragment thereof according to any one of preferred embodiments I to XVI is provided, wherein the antibody or antigen-binding fragment is unfucosylated.
根据优选的实施方式XVIII,提供了根据优选的实施方式I至XVII中任一项的分离的抗体或其抗原结合片段,其中抗体或其抗原结合片段According to preferred embodiment XVIII, an isolated antibody or antigen-binding fragment thereof according to any one of preferred embodiments I to XVII is provided, wherein the antibody or antigen-binding fragment thereof
a.通过人效应细胞(例如人NK细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的细胞毒性(ADCC),和/或a. Induction of antibody-dependent cell-mediated cytotoxicity (ADCC) in target cells expressing human CCR8 via human effector cells (e.g., human NK cells), and/or
b.通过人效应细胞(例如人类巨噬细胞)在表达人CCR8的靶细胞中诱导抗体依赖性细胞介导的吞噬作用(ADCP),b. Inducing antibody-dependent cell-mediated phagocytosis (ADCP) in target cells expressing human CCR8 using human effector cells (e.g., human macrophages).
优选地,其中Preferably, wherein
c.ADCC诱导的激活人调节性T细胞的最大耗竭为至少25%、30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%、98%或99%,和/或c. The maximum exhaustion of ADCC-induced activated human regulatory T cells is at least 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 98%, or 99%, and/or
d.ADCP诱导的激活人调节性T细胞的最大耗竭为至少5%、10%、15%、20%、25%、30%、40%或50%,和/或d. The maximum exhaustion of ADCP-induced activated human regulatory T cells is at least 5%, 10%, 15%, 20%, 25%, 30%, 40%, or 50%, and/or
e.最大的ADCC和ADCP诱导的激活人调节性T细胞的体外耗竭为至少30%、35%、40%、45%、50%、55%、60%、70%、80%、90%、95%或99%。e. The in vitro exhaustion of activated human regulatory T cells induced by the largest ADCC and ADCP was at least 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, or 99%.
根据优选的实施方式XIX,提供了根据优选的实施方式I至XVIII中任一项的分离的抗体或抗原结合片段,其中According to preferred embodiment XIX, a separated antibody or antigen-binding fragment according to any one of preferred embodiments I to XVIII is provided, wherein...
a.抗体或抗原结合片段对ADCC诱导的激活人调节性T细胞的耗竭的EC50低于100pM、50pM、25pM、12.5pM、10pM或5pM和/或a. Antibody or antigen-binding fragments inhibiting ADCC-induced activation of human regulatory T cells with an EC50 of less than 100 pM, 50 pM, 25 pM, 12.5 pM, 10 pM, or 5 pM and/or
b.抗体或抗原结合片段对ADCP诱导的激活人调节性T细胞的耗竭的EC50低于500pM、250pM、200pM、150pM、100pM、75pM、50pM或25pM。b. Antibody or antigen-binding fragments that induce depletion of human regulatory T cells by ADCP at EC50 values below 500 pM, 250 pM, 200 pM, 150 pM, 100 pM, 75 pM, 50 pM, or 25 pM.
根据优选的实施方式XX,根据了任何前述优选的实施方式的分离的抗体或抗原结合片段,其中所述抗体或抗原结合片段的有效剂量According to preferred embodiment XX, an isolated antibody or antigen-binding fragment according to any of the foregoing preferred embodiments, wherein the effective dose of said antibody or antigen-binding fragment...
a.在体外或受试者中将激活或肿瘤内调节性T细胞的数量减少至低于50%、40%、30%、25%、20%、10%、5%或1%和/或a. Reducing the number of activated or intratumoral regulatory T cells to less than 50%, 40%, 30%, 25%, 20%, 10%, 5%, or 1% in vitro or in subjects and/or
b.在体外或受试者中将肿瘤内CD8+T细胞与肿瘤内Treg的比率增加至至少5、10、15、20、25、30、40、50、60、70、80、90、100、150、200或更高和/或b. In vitro or in subjects, increasing the ratio of intratumoral CD8+ T cells to intratumoral Tregs to at least 5, 10, 15, 20, 25, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200 or higher and/or
c.在体外或受试者中,将肿瘤内CD4+T细胞的调节性T细胞的百分比减少至<30%、<20%、<10%或<5%。c. Reduce the percentage of regulatory T cells within the tumor CD4+ T cell population to <30%, <20%, <10%, or <5%, either in vitro or in subjects.
根据优选的实施方式XXI,提供了根据任何前述优选的实施方式的分离的抗体或抗原结合片段,其中有效剂量的抗体或抗原结合片段诱导肿瘤中三级淋巴结构的形成。According to a preferred embodiment XXI, an isolated antibody or antigen-binding fragment according to any of the foregoing preferred embodiments is provided, wherein an effective dose of the antibody or antigen-binding fragment induces the formation of tertiary lymphoid structures in a tumor.
根据优选的实施方式XXII,提供了根据任何前述优选的实施方式的分离的抗体或抗原结合片段,其中抗体是IgG抗体,优选地人IgGl或鼠IgG2a,和/或其中抗原结合片段是到scFv、Fab、Fab′或F(ab′)2片段。According to preferred embodiment XXII, an isolated antibody or antigen-binding fragment according to any of the foregoing preferred embodiments is provided, wherein the antibody is an IgG antibody, preferably human IgG1 or mouse IgG2a, and/or wherein the antigen-binding fragment is a fragment to scFv, Fab, Fab′ or F(ab′)2.
根据优选的实施方式XXIII,提供了包含根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段的缀合物,优选地,其中缀合物包含According to preferred embodiment XXIII, a conjugate comprising an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII is provided, preferably wherein the conjugate comprises
a.放射性元素,a. Radioactive elements,
b.细胞毒性剂,例如auristatin、美登木素生物碱、驱动蛋白纺锤体蛋白抑制剂、烟酰胺磷酸核糖基转移酶抑制剂或吡咯并苯二氮衍生物,b. Cytotoxic agents, such as auristatin, maytansin alkaloids, kinin spindle protein inhibitors, nicotinamide phosphoribosyltransferase inhibitors, or pyrrolobenzodiazepine derivatives.
c.进一步的抗体或抗原结合片段,或c. Further antibody or antigen-binding fragments, or
d.嵌合抗原受体。d. Chimeric antigen receptor.
根据优选的实施方式XXIV,提供了药物组合物,其包含根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物。According to preferred embodiment XXIV, a pharmaceutical composition is provided comprising an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII, or a conjugate according to preferred embodiment XXIII.
根据优选的实施方式XXV,提供了根据优选的实施方式XXIV的药物组合物,其包含一种或多种进一步的治疗活性化合物,优选地选自According to preferred embodiment XXV, a pharmaceutical composition according to preferred embodiment XXIV is provided, comprising one or more further therapeutically active compounds, preferably selected from...
a.靶向检查点蛋白的抗体或化合物,例如PD1、PD-L1或CTLA-4,优选地,其中靶向检查点蛋白的抗体或化合物是Nivolumab,Pembrolizumab,Atezolizumab,Avelumab,Durvalumab,Cemiplimab,Dostarlimab或Ipilimumab,a. An antibody or compound targeting a checkpoint protein, such as PD1, PD-L1, or CTLA-4, preferably wherein the antibody or compound targeting the checkpoint protein is Nivolumab, Pembrolizumab, Atezolizumab, Avelumab, Durvalumab, Cemiplimab, Dostarlimab, or Ipilimumab.
b.靶向另外的趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,b. Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
c.靶向HER2和/或EGFR的抗体或小分子,c. Antibodies or small molecules targeting HER2 and/or EGFR,
d.任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌和食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,d. Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma and esophageal tumors, melanoma, bladder cancer, liver cancer and/or prostate cancer.
e.化疗剂,优选地紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,e. Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
e.B细胞消耗剂,例如抗CD19抗体或抗CD20抗体和/或e.B cell depleting agents, such as anti-CD19 antibodies or anti-CD20 antibodies and/or
f.靶向激酶抑制剂,如索拉非尼、瑞戈非尼或MEKi-1。f. Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1.
根据优选的实施方式XXVI,提供了根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物或根据优选实施方式XXIV或XXV的药物组合物用作药物。According to preferred embodiment XXVI, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII, or a conjugate according to preferred embodiment XXIII, or a pharmaceutical composition according to preferred embodiment XXIV or XXV is provided for use as a drug.
根据优选的实施方式XXVII,提供了根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物或根据优选的实施方式XXIV或XXV的药物组合物,用于治疗肿瘤或以CCR8阳性细胞为特征的疾病,例如CCR8阳性调节性T细胞。According to preferred embodiment XXVII, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII, or a conjugate according to preferred embodiment XXIII, or a pharmaceutical composition according to preferred embodiment XXIV or XXV, is provided for treating tumors or diseases characterized by CCR8 positive cells, such as CCR8 positive regulatory T cells.
根据优选的实施方式XXVIII,提供了根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物或根据优选的实施方式XXIV或XXV的药物组合物,用于(i)优选地与选自以下地一种或多种另外的治疗活性化合物同时、分开、或顺序组合According to preferred embodiment XXVIII, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII, or a conjugate according to preferred embodiment XXIII, or a pharmaceutical composition according to preferred embodiment XXIV or XXV, is provided for (i) preferably in combination with one or more additional therapeutically active compounds selected from the group consisting of, separately from, or sequentially thereof.
a.靶向检查点蛋白的抗体或化合物,例如PD1、PD-L1或CTLA-4,优选地,其中靶向检查点蛋白的抗体或小分子是Nivolumab,Pembrolizumab,Atezolizumab,Avelumab,Durvalumab,Cemiplimab,Dostarlimab或Ipilimumab,a. An antibody or compound targeting a checkpoint protein, such as PD1, PD-L1, or CTLA-4, preferably wherein the antibody or small molecule targeting the checkpoint protein is Nivolumab, Pembrolizumab, Atezolizumab, Avelumab, Durvalumab, Cemiplimab, Dostarlimab, or Ipilimumab.
b.靶向另外的趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,b. Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
c.靶向肿瘤细胞特异性表达的蛋白的抗体,c. Antibodies that target proteins specifically expressed by tumor cells.
d.靶向HER2和/或EGFR的抗体或小分子,d. Antibodies or small molecules targeting HER2 and/or EGFR,
e.任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌和食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,e. Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma and esophageal tumors, melanoma, bladder cancer, liver cancer and/or prostate cancer.
f.化疗剂,优选地紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,和/或f. Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin or gemcitabine, and/or
g.靶向激酶抑制剂,如索拉非尼、瑞戈非尼或MEKi-1。g. Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1.
(ii)与放射疗法组合,和/或(iii)与耗竭肿瘤内B细胞组合,以治疗以CCR8阳性细胞例如CCR8阳性调节性T细胞为特征的肿瘤或疾病。(ii) in combination with radiotherapy, and/or (iii) in combination with depleted intratumoral B cells, to treat tumors or diseases characterized by CCR8-positive cells, such as CCR8-positive regulatory T cells.
根据优选的实施方式XXIX,提供了用于优选的实施方式XXVII或XXVIII的抗体、片段、缀合物或药物组合物,其中肿瘤选自T细胞急性淋巴细胞白血病、乳腺癌、三阴性乳腺癌癌症、三重阳性乳腺癌、非小细胞肺癌(NSCLC)、小细胞肺癌(SCLC)、睾丸癌、胃癌、头颈部鳞状细胞癌、胸腺瘤、食道腺癌、结直肠癌、胰腺癌、卵巢癌或宫颈癌、急性髓性白血病、肾癌、膀胱癌、皮肤癌、黑色素瘤、甲状腺癌、间皮瘤、肉瘤和前列腺癌、B细胞淋巴瘤、T细胞淋巴瘤或涉及CCR8表达细胞的任何其他癌症,优选地其中肿瘤选自头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌、前列腺癌、B细胞淋巴瘤和T细胞淋巴瘤。根据优选的实施方式XXX,提供了用于优选的实施方式XXVI至XXIX的抗体、片段、缀合物或药物组合物,其中该用途包括确定According to preferred embodiment XXIX, antibodies, fragments, conjugates, or pharmaceutical compositions for use in preferred embodiments XXVII or XXVIII are provided, wherein the tumor is selected from T-cell acute lymphoblastic leukemia, breast cancer, triple-negative breast cancer, triple-positive breast cancer, non-small cell lung cancer (NSCLC), small cell lung cancer (SCLC), testicular cancer, gastric cancer, head and neck squamous cell carcinoma, thymoma, esophageal adenocarcinoma, colorectal cancer, pancreatic cancer, ovarian cancer or cervical cancer, acute myeloid leukemia, kidney cancer, bladder cancer, skin cancer, melanoma, thyroid cancer, mesothelioma, sarcoma, and prostate cancer, B-cell lymphoma, T-cell lymphoma, or any other cancer involving CCR8-expressing cells, preferably wherein the tumor is selected from head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, prostate cancer, B-cell lymphoma, and T-cell lymphoma. According to preferred embodiment XXX, antibodies, fragments, conjugates, or pharmaceutical compositions for use in preferred embodiments XXVI to XXIX are provided, wherein the use includes determining
a.肿瘤浸润淋巴细胞的存在或数量,a. The presence or number of tumor-infiltrating lymphocytes
b.巨噬细胞和/或NK细胞的存在或数量,b. Presence or number of macrophages and/or NK cells
c.CCR8阳性或FOXP3阳性调节性T细胞的存在或数量,c. The presence or number of CCR8-positive or FOXP3-positive regulatory T cells.
d.肿瘤突变负荷,d. Tumor mutation burden,
e.癌症分期,e. Cancer staging
f.干扰素刺激基因或蛋白的存在、水平或激活,f. The presence, level, or activation of interferon-stimulated genes or proteins.
g.CCR8表达,g.CCR8 expression,
h.补体因子蛋白、丝氨酸蛋白酶抑制剂和/或MHC成分的存在或数量,h. The presence or quantity of complement factor proteins, serine protease inhibitors, and/or MHC components.
i.细胞因子的存在或数量,例如炎性或抑制性细胞因子,i. The presence or quantity of cytokines, such as inflammatory or inhibitory cytokines.
j.免疫基因表达的激活,和/或j. Activation of immune gene expression, and/or
k.免疫检查点(蛋白)表达,例如PD-(L)1或CTLA4表达,k. Expression of immune checkpoint (proteins), such as PD-(L)1 or CTLA4 expression.
l.肿瘤浸润性CD19+B细胞的存在或数量,1. The presence or number of tumor-infiltrating CD19+ B cells
m.肿瘤浸润性CD8+T细胞的存在或数量;m. The presence or number of tumor-infiltrating CD8+ T cells;
以预测或监测治疗成功率。To predict or monitor treatment success rates.
根据优选的实施方式XXXI,提供了编码根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段的多核苷酸。According to preferred embodiment XXXI, a polynucleotide encoding an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII is provided.
根据优选的实施方式XXXII,提供了包含根据优选的实施方式XXXI的多核苷酸的载体。According to preferred embodiment XXXII, a vector comprising a polynucleotide according to preferred embodiment XXXI is provided.
根据优选的实施方式XXXIII,提供了一种分离的细胞,其被安排用于产生根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段。According to preferred embodiment XXXIII, an isolated cell is provided which is arranged to produce an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII.
根据优选的实施方式XXXIV,提供了一种产生根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物的方法,其包括培养根据优选的实施方式XXXIII的细胞和任选地纯化抗体或抗原结合片段。According to preferred embodiment XXXIV, a method is provided for generating an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII or a conjugate according to preferred embodiment XXIII, comprising culturing cells according to preferred embodiment XXXIII and optionally purifying the antibody or antigen-binding fragment.
根据优选的实施方式XXXV,提供了根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物用作体内或体外诊断剂。According to preferred embodiment XXXV, an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII or a conjugate according to preferred embodiment XXIII is provided for use as an in vivo or in vitro diagnostic agent.
根据优选的实施方式XXXVI,提供了一种试剂盒,其包含根据优选的实施方式I至XXII中任一项的抗体或抗原结合片段或根据优选的实施方式XXIII的缀合物或根据优选的实施方式XXIV或XXV的药物组合物以及使用说明书。According to preferred embodiment XXXVI, a kit is provided comprising an antibody or antigen-binding fragment according to any one of preferred embodiments I to XXII, or a conjugate according to preferred embodiment XXIII, or a pharmaceutical composition according to preferred embodiments XXIV or XXV, and instructions for use.
方面19-抗体缀合物Aspect 19-antibody conjugate
除了裸抗体外,还可以使用本文所公开的抗体或抗原结合片段设计各种其他基于抗体或抗体片段的缀合物。这些缀合物可以是用于诊断、治疗、研究应用和各种其他目的的缀合物。提供了例如与放射性核素、细胞毒性剂、有机化合物、蛋白质毒素、免疫调节剂例如细胞因子、荧光部分、细胞缀合的抗体或其抗原结合片段,另外的抗体或其抗原结合片段。In addition to naked antibodies, various other antibody- or antibody-fragment-based conjugates can be designed using the antibodies or antigen-binding fragments disclosed herein. These conjugates can be for diagnostic, therapeutic, research applications, and various other purposes. Antibodies or antigen-binding fragments conjugated to, for example, radionuclides, cytotoxic agents, organic compounds, protein toxins, immunomodulators such as cytokines, fluorescent moieties, and cells are provided, as well as additional antibodies or antigen-binding fragments thereof.
本文公开的缀合物例如抗体药物缀合物(ADC)、靶向钍缀合物(TTC)、双特异性抗体等本质上是“模块”的。在整个公开内容中,描述了构成缀合物的各种“模块”的各种特定实施方式。作为具体的非限制性实例,描述了可以构成ADC的抗体或其片段、接头和细胞毒性剂和/或细胞抑制剂的具体实施方式。意图是所有描述的具体实施方式可以相互组合,就好像每个具体组合被明确地单独描述一样。The conjugates disclosed herein, such as antibody-drug conjugates (ADCs), targeted thorium conjugates (TTCs), and bispecific antibodies, are essentially "modules." Throughout the disclosure, various specific embodiments of the various "modules" constituting the conjugates are described. Specific embodiments of antibodies or fragments thereof, linkers, and cytotoxic agents and/or cell inhibitors that can constitute an ADC are described as concrete, non-limiting examples. It is intended that all described specific embodiments can be combined with each other as if each specific combination were explicitly described separately.
根据第十九方面,提供了包含根据第六、第七、第八、第九、第十、第十一、第十二、第十三、第十四、第十五、第十六、第十七和/或第十八方面的抗体或抗原结合片段的缀合物或其组合。例如,缀合物包含根据第六方面的抗体或抗原结合片段。例如,缀合物包含根据第七方面的抗体或抗原结合片段。例如,缀合物包含根据第八方面的抗体或抗原结合片段。例如,缀合物包含根据第9方面的抗体或抗原结合片段。例如,缀合物包含第十方面的抗体或抗原结合片段。例如,缀合物包含根据第十一方面的抗体或抗原结合片段。例如,缀合物包含根据第十二方面的抗体或抗原结合片段。例如,缀合物包含第十三方面的抗体或抗原结合片段。例如,缀合物包含根据第十四方面的抗体或抗原结合片段。例如,缀合物包含根据第十五方面的抗体或抗原结合片段。例如,缀合物包含根据第十六方面的抗体或抗原结合片段。例如,缀合物包含根据第十七方面的抗体或抗原结合片段。例如,缀合物包含根据第十八方面的抗体或抗原结合片段。According to the nineteenth aspect, a conjugate or combination thereof comprising antibody or antigen-binding fragments according to aspects six, seven, eight, nine, ten, eleven, twelfth, thirteenth, fourteenth, fifteenth, sixteenth, seventeenth, and/or eighteenth is provided. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect six. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect seven. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect eight. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect nine. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect ten. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect eleven. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect twelfth. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect thirteen. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect fourteen. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect fifteen. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect sixteen. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect seventeen. For example, the conjugate comprises an antibody or antigen-binding fragment according to aspect eighteen.
根据一些优选的实施方式,缀合物包含(a)放射性元素,(b)细胞毒性剂,例如auristatin、美登木素生物碱、驱动蛋白-纺锤体蛋白(KSP)抑制剂、烟酰胺磷酸核糖基转移酶(NAMPT)抑制剂或吡咯并苯二氮衍生物,(c)进一步的抗体或抗原结合片段,(d)嵌合抗原受体。According to some preferred embodiments, the conjugate comprises (a) a radioactive element, (b) a cytotoxic agent, such as auristatin, maytansine alkaloid, kinin-spindle protein (KSP) inhibitor, nicotinamide phosphoribosyltransferase (NAMPT) inhibitor, or pyrrolobenzodiazepine derivative, (c) a further antibody or antigen-binding fragment, and (d) a chimeric antigen receptor.
放射性缀合物Radioactive conjugates
根据第十九方面的一些第一实施方式,缀合物包含或被设置成包含放射性核素,例如β粒子、α粒子或俄歇电子发射体。根据本发明的合适的β发射体是例如钇-90、碘-131、锶-89-氯化物、镥-177、钬-166、铼-186、铼-188、铜-67、钷-149、金-199,和铑-105。根据本发明,合适的俄歇电子发射体是例如溴-77、铟-11、碘-123和碘-125。根据本发明,合适的α发射体是例如钍-227、铋-213、镭-223、锕-225和砹-211。According to some first embodiments of the nineteenth aspect, the conjugate comprises or is configured to comprise a radionuclide, such as a beta particle, an alpha particle, or an Auger electron emitter. Suitable beta emitters according to the invention are, for example, yttrium-90, iodine-131, strontium-89-chloride, lutetium-177, holmium-166, rhenium-186, rhenium-188, copper-67, promethium-149, gold-199, and rhodium-105. Suitable Auger electron emitters according to the invention are, for example, bromine-77, indium-11, iodine-123, and iodine-125. Suitable alpha emitters according to the invention are, for example, thorium-227, bismuth-213, radium-223, actinium-225, and astatine-211.
例如,钍-227(227Th)可以有效地与和本发明的抗体缀合的八齿3,2-羟基吡啶酮(3,2-HOPO)螯合剂复合,产生高度稳定的靶向钍-227缀合物(TTC),例如实施例13中所述。靶向钍缀合物(TTC)包含三个主要结构单元。在钍-227的β粒子衰变之后,第一个组成部分,放射性核素227Th的发射α粒子的通过离子交换色谱法纯化。第二个组成部分是螯合剂,例如含有HOPO基团的铁载体衍生螯合剂,其在对称的聚胺支架上(用羧酸接头功能化以进行生物缀合)带有四个3-羟基-N-甲基-2-吡啶酮部分。可以通过与赖氨酸残基的ε-氨基形成酰胺键来实现与靶向部分的缀合。这些八齿3,2-HOPO螯合剂可以用227Th有效标记,在环境条件下具有高产率、纯度和稳定性。与经常需要加热的四氮杂环十二烷-1,4,7,10-四乙酸(DOTA)螯合剂相比,HOPO螯合剂由于在环境温度下有效的放射性标记和形成的复合物的高稳定性而具有优势。第三个组成部分是靶向部分,即根据方面6、7、8、9、10、11、12、13、14、15、16、17或18的任一方面的趋化因子受体抗体或其抗原结合部分。For example, thorium-227 (227Th) can be effectively complexed with an octate 3,2-hydroxypyridinone (3,2-HOPO) chelating agent conjugated with the antibody of the present invention to produce highly stable targeted thorium-227 conjugates (TTCs), as described in Example 13. The targeted thorium conjugate (TTC) comprises three main structural units. The first component, the emission α-particle of the radionuclide 227Th , is purified by ion-exchange chromatography after the β-particle decay of thorium-227. The second component is a chelating agent, such as a siderophore-derived chelating agent containing a HOPO group, which has four 3-hydroxy-N-methyl-2-pyridinone moieties on a symmetrical polyamine scaffold (functionalized with carboxylic acid linkers for bioconjugation). Conjugation to the targeting moieties can be achieved by forming amide bonds with the ε-amino groups of lysine residues. These octate 3,2-HOPO chelating agents can be effectively labeled with 227Th and exhibit high yield, purity, and stability under ambient conditions. Compared to tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA) chelators, which often require heating, HOPO chelators offer advantages due to their efficient radiolabeling at ambient temperatures and the high stability of the resulting complex. The third component is the targeting portion, which is a chemokine receptor antibody or its antigen-binding portion according to any of aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, or 18.
ADCADC
根据第十九方面的一些第二实施方式,缀合物包含细胞毒性剂,例如以形成抗体药物缀合物(ADC)。According to some second embodiments of the nineteenth aspect, the conjugate contains a cytotoxic agent, for example, to form an antibody-drug conjugate (ADC).
在一些优选的实施方式中,细胞毒性剂是auristatin、美登木素生物碱、驱动蛋白-纺锤体蛋白(KSP)抑制剂、烟酰胺磷酸核糖基转移酶(NAMPT)抑制剂或吡咯并苯二氮衍生物。包含美登木素生物碱的缀合物的产生可如Chari,Ravi VJ,et al.″Immunoconjugates containing novel maytansinoids:promising anticancer drugs.″Cancer research 52.1(1992):127-131或EP2424569 B1,两者的全部内容通过引用并入本文。包含驱动蛋白-纺锤体蛋白(KSP)抑制剂的缀合物的产生可以如WO2019243159 A1中所述发生,其全部内容通过引用并入本文。包含烟酰胺磷酸核糖基转移酶(NAMPT)抑制剂的缀合物的产生可以如WO2019149637 A1中所述,其全部内容通过引用并入本文。包含吡咯并苯并二氮杂的缀合物的产生可以如EP3355935 A1中所述,其全部内容通过引用并入本文。In some preferred embodiments, the cytotoxic agent is auristatin, maytansin alkaloid, kinin-spindle protein (KSP) inhibitor, nicotinamide phosphoribosyltransferase (NAMPT) inhibitor, or pyrrolobenzodiazepine derivative. Conjugates containing maytansin alkaloids may be generated as described in Chari, Ravi VJ, et al. "Immunoconjugates containing novel maytansinoids: promising anticancer drugs." Cancer research 52.1 (1992): 127-131 or EP2424569 B1, the entire contents of which are incorporated herein by reference. Conjugates containing kinin-spindle protein (KSP) inhibitors may be generated as described in WO2019243159 A1, the entire contents of which are incorporated herein by reference. The preparation of conjugates containing nicotinamide phosphoribosyltransferase (NAMPT) inhibitors can be described as in WO2019149637 A1, the entire contents of which are incorporated herein by reference. The preparation of conjugates containing pyrrolobenzodiazepines can be described as in EP3355935 A1, the entire contents of which are incorporated herein by reference.
抗趋化因子受体或抗CCR8 ADC的细胞毒性剂和/或细胞抑制剂可以是已知抑制细胞生长和/或复制和/或杀死细胞的任何试剂。许多具有细胞毒性和/或细胞生长抑制特性的试剂在文献中是已知的。细胞毒性剂和/或细胞生长抑制剂的非限制性实例包括,例如但不限于细胞周期调节剂、细胞凋亡调节剂、激酶抑制剂、蛋白质合成抑制剂、烷化剂、DNA交联剂、嵌入剂、线粒体抑制剂、核输出抑制剂、拓扑异构酶I抑制剂、拓扑异构酶II抑制剂、RNA/DNA抗代谢物和抗有丝分裂剂。Cytotoxic agents and/or cell inhibitors that are anti-chemokine receptors or anti-CCR8 ADCs can be any agent known to inhibit cell growth and/or replication and/or kill cells. Many agents with cytotoxic and/or cell growth-inhibiting properties are known in the literature. Non-limiting examples of cytotoxic agents and/or cell growth inhibitors include, for example, but not limited to, cell cycle regulators, apoptosis regulators, kinase inhibitors, protein synthesis inhibitors, alkylating agents, DNA cross-linking agents, intercalating agents, mitochondrial inhibitors, nuclear export inhibitors, topoisomerase I inhibitors, topoisomerase II inhibitors, RNA/DNA antimetabolites, and antimitotic agents.
将细胞毒性剂和/或细胞抑制剂连接到抗趋化因子受体或抗CCR8ADC的抗原结合部分的接头在性质上可以是长的、短的、柔性的、刚性的、亲水的或疏水的,或者可以包含具有不同的特性的片段,例如柔性片段、刚性片段等。接头可对细胞外环境化学稳定,例如,在血流中化学稳定,或者可包括不稳定的接头并释放细胞毒性剂和/或细胞抑制剂到胞外环境中。在一些实施方式中,接头包括被设计成在抗趋化因子受体或抗CCR8 ADC在细胞内内化时释放细胞毒性剂和/或细胞抑制剂的连接。在一些具体的实施方式中,接头包括被设计成在细胞内特异性或非特异性地切割和/或牺牲或以其他方式分解的连接。用于将药物连接至抗原结合部分(例如ADC背景下的抗体)的多种接头在本领域中是已知的。任何这些接头以及其他接头可用于将细胞毒性剂和/或细胞生长抑制剂连接到抗趋化因子受体或抗CCR8ADC的抗原结合部分。Connectors that link cytotoxic agents and/or cell inhibitors to the antigen-binding portion of anti-chemokine receptors or anti-CCR8 ADCs can be long, short, flexible, rigid, hydrophilic, or hydrophobic in nature, or can comprise fragments with different properties, such as flexible fragments, rigid fragments, etc. Connectors can be chemically stable to the extracellular environment, for example, chemically stable in bloodstream, or can include unstable connectors and release cytotoxic agents and/or cell inhibitors into the extracellular environment. In some embodiments, the connector includes a link designed to release the cytotoxic agent and/or cell inhibitor upon internalization of the anti-chemokine receptor or anti-CCR8 ADC within the cell. In some specific embodiments, the connector includes a link designed to be specifically or non-specifically cleaved and/or sacrificed or otherwise disintegrated within the cell. A variety of connectors for linking drugs to antigen-binding portions (e.g., antibodies in the context of ADCs) are known in the art. Any of these and other connectors can be used to link cytotoxic agents and/or cell growth inhibitors to the antigen-binding portion of anti-chemokine receptors or anti-CCR8 ADCs.
与抗趋化因子受体或抗CCR8 ADC的抗原结合部分相连的细胞毒性剂和/或细胞抑制剂的数量(药物抗体比率:DAR)可变化,并且仅受抗原结合部分上的可用连接位点的数量和连接到单个接头的试剂的数量的限制。通常,接头将单个细胞毒性剂和/或细胞抑制剂连接至抗趋化因子受体或抗CCR8 ADC的抗原结合部分。在包含不止一种细胞毒性剂和/或细胞抑制剂的抗趋化因子受体或抗CCR8 ADC的实施方式中,每种试剂可以相同或不同。只要抗趋化因子受体或抗CCR8 ADC在使用和/或储存条件下不表现出不可接受的聚集水平,考虑抗趋化因子受体或抗CCR8 ADC,DAR为20,甚至更高。在一些实施方式中,本文描述的抗趋化因子受体或抗CCR8 ADC的DAR可能在约1-10、1-8、1-6或1-4的范围内。在某些具体的实施方式中,抗趋化因子受体或抗CCR8 ADC的DAR可为2、3或4。在一些实施方式中,抗趋化因子受体或抗CCR8 ADC是根据结构式(I)的化合物:The number of cytotoxic agents and/or cell inhibitors (drug-antibody ratio: DAR) linked to the antigen-binding moiety of an anti-chemokine receptor or anti-CCR8 ADC can vary and is limited only by the number of available linker sites on the antigen-binding moiety and the number of reagents linked to a single linker. Typically, the linker links a single cytotoxic agent and/or cell inhibitor to the antigen-binding moiety of the anti-chemokine receptor or anti-CCR8 ADC. In embodiments of anti-chemokine receptor or anti-CCR8 ADCs containing more than one cytotoxic agent and/or cell inhibitor, each reagent may be the same or different. Considering the anti-chemokine receptor or anti-CCR8 ADC, the DAR is 20 or higher, provided that the anti-chemokine receptor or anti-CCR8 ADC does not exhibit unacceptable levels of aggregation under use and/or storage conditions. In some embodiments, the DAR of the anti-chemokine receptor or anti-CCR8 ADC described herein may be in the range of about 1-10, 1-8, 1-6, or 1-4. In certain specific embodiments, the DAR of the anti-chemokine receptor or anti-CCR8 ADC may be 2, 3, or 4. In some implementations, the anti-chemokine receptor or anti-CCR8 ADC is a compound according to structural formula (I):
[D-L-XY]n-Ab (I)[D-L-XY]n-Ab (I)
或其盐,其中每个“D”独立于其他代表细胞毒性剂和/或细胞生长抑制剂;每个“L”独立于其他代表接头;“Ab”代表抗趋化因子受体结合部分,例如根据本发明的抗CCR8抗体;每个“XY”代表在接头上的官能团Rx和抗趋化因子受体结合部分上的“互补”官能团Ry之间形成的连接;n代表抗趋化因子受体ADC的DAR。Or its salts, wherein each “D” represents a cytotoxic agent and/or cell growth inhibitor independently of the others; each “L” represents a linker independently of the others; “Ab” represents an anti-chemokine receptor binding moiety, such as the anti-CCR8 antibody according to the invention; each “XY” represents a connection formed between a functional group Rx on the linker and a “complementary” functional group Ry on the anti-chemokine receptor binding moiety; and n represents the DAR of the anti-chemokine receptor ADC.
在一个具体的示例性实施方式中,抗趋化因子受体ADC是根据结构式(I)的化合物,其中每个“D”相同并且是细胞渗透性auristatin(例如,dolastatin-10或MMAE)或细胞渗透性小沟结合DNA交联剂;每个“L”是相同的并且是可被溶酶体酶切割的接头;每个“XY”是马来酰亚胺和巯基之间形成的键;“Ab”是包含对应于根据本发明的抗趋化因子受体或CCR8抗体的六个CDR的六个CDR的抗体或其片段;n是2、3或4。在一个具体实施方式中,“Ab”是包含人源CDR的完全人抗体。In one specific exemplary embodiment, the anti-chemokine receptor ADC is a compound according to structural formula (I), wherein each "D" is identical and is a cell-permeable auristatin (e.g., dolastatin-10 or MMAE) or a cell-permeable minor groove binding DNA cross-linker; each "L" is identical and is a linker that can be cleaved by lysosomal enzymes; each "XY" is a bond formed between a maleimide and a thiol group; "Ab" is an antibody or fragment thereof comprising six CDRs corresponding to six CDRs of an anti-chemokine receptor or CCR8 antibody according to the present invention; n is 2, 3, or 4. In one specific embodiment, "Ab" is a fully human antibody comprising human CDRs.
细胞毒性剂和细胞生长抑制剂是已知抑制细胞生长和/或复制和/或杀死细胞,特别是肿瘤细胞或肿瘤内Treg细胞的试剂。这些化合物可用于与抗趋化因子受体抗体如CCR8抗体的联合治疗,或作为抗趋化因子受体ADC的一部分,如以下所述:Cytotoxic agents and cell growth inhibitors are known agents that inhibit cell growth and/or replication and/or kill cells, particularly tumor cells or intratumoral Treg cells. These compounds can be used in combination therapy with anti-chemokine receptor antibodies such as CCR8 antibodies, or as part of an anti-chemokine receptor ADC, as described below:
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是选自以下的细胞生长抑制剂:放射性核素、烷化剂、DNA交联剂、DNA嵌入剂(例如,沟结合剂如小沟结合剂)、细胞周期调节剂、细胞凋亡调节剂、激酶抑制剂、蛋白质合成抑制剂、线粒体抑制剂、核输出抑制剂、拓扑异构酶I抑制剂、拓扑异构酶II抑制剂、RNA/DNA抗代谢药和抗有丝分裂剂。In some embodiments, the drug portion of the antichemokine receptor or anti-CCR8 ADC is selected from the following cell growth inhibitors: radionuclides, alkylating agents, DNA cross-linking agents, DNA intercalating agents (e.g., groove binding agents such as minor groove binding agents), cell cycle regulators, apoptosis regulators, kinase inhibitors, protein synthesis inhibitors, mitochondrial inhibitors, nuclear export inhibitors, topoisomerase I inhibitors, topoisomerase II inhibitors, RNA/DNA antimetabolites, and antimitotic agents.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是选自以下的烷化剂:asaley(L-亮氨酸,N-[N-乙酰基-4-[双-(2-氯乙基)氨基]-DL苯丙氨酸]-乙酯)的烷基化剂;AZQ(1,4-环己二烯-1,4-二氨基甲酸,2,5-双(1-氮丙啶基)-3,6-二氧代-二乙酯);BCNU(N,N′-双(2-氯乙基)-N-亚硝脲);丁砜(1,4-丁二醇二甲磺酸盐);(羧基邻苯二甲酸)铂;CBDCA(顺-(1,1-环丁烷二羧基)二胺铂(II));CCNU(N-(2-氯乙基)-N′-环己基-N-亚硝脲);CHIP(异丙铂;NSC 256927);氯霉素;氯佐菌素(2-[[[(2-氯乙基)亚硝基氨基]羰基]氨基]-2-脱氧-D-吡喃糖);顺式铂(顺铂);氯介子;氰基吗啉多柔比星;环二酮;二氢半乳糖醇(5,6-二羟基杜洛糖醇);氟多巴((5-[(2-氯乙基)-(2-氟乙基)氨基]-6-甲基-尿嘧啶);庚磺胺;斑蝥酮;吲哚美辛二聚体DGN462;美法仑;甲基CCNU((1-(2-氯乙基)-3-(反-4-甲基环己烷)-1-亚硝基脲);丝裂霉素C;米托唑胺;氮芥((双(2-氯乙基)甲胺盐酸盐);PCNU((1-(2-氯乙基)-3-(2,6-二氧代-3-哌啶基)-1-亚硝基脲));哌嗪烷基化剂(1-(2-氯乙基)-4-(3-氯丙基)-哌嗪盐酸盐);哌嗪二酮;哌嗪(N,N′-双(3-溴丙酰基)哌嗪);博菲霉素(N-甲基丝裂霉素C);螺旋海因芥;特罗西隆(异氰尿酸三缩水甘油酯);四拉丁语;硫代磷酸(N,N′,N″-三-1,2-乙二基硫代磷酰胺);三乙醇胺;尿嘧啶氮芥;Yoshi-864((双(3-甲氧基丙基)胺盐酸盐)。In some embodiments, the drug portion of the anti-chemokine receptor or anti-CCR8 ADC is an alkylating agent selected from: asaley (an alkylating agent of L-leucine, N-[N-acetyl-4-[bis-(2-chloroethyl)amino]-DL-phenylalanine]-ethyl ester); AZQ (1,4-cyclohexadiene-1,4-dicarboxylic acid, 2,5-bis(1-aziridinyl)-3,6-dioxo-diethyl ester); BCNU (N,N′-bis(2-chloroethyl)-N-nitrosourea); sulfolane (1,4- Butylene glycol dimethyl sulfonate); (carboxyphthalic acid)platinum; CBDCA (cis-(1,1-cyclobutanedicarboxy)diamineplatin(II)); CCNU (N-(2-chloroethyl)-N′-cyclohexyl-N-nitrosourea); CHIP (isopropylplatinum; NSC 256927); chloramphenicol; chlorzoxacin (2-[[[(2-chloroethyl)nitrosoamino]carbonyl]amino]-2-deoxy-D-pyranose); cisplatin (cisplatin); chloramphenicol; cyanomorpholinodoxorubicin; cyclodiketone; dihydrogalactitol (5 6-Dihydroxyduroitol); Fluorodopa ((5-[(2-chloroethyl)-(2-fluoroethyl)amino]-6-methyl-uracil); Heptylsulfamethoxazole; Cantharidin; Indomethacin dimer DGN462; Melphalan; Methyl CCNU ((1-(2-chloroethyl)-3-(trans-4-methylcyclohexane)-1-nitrosourea); Mitomycin C; Mitozodamine; Nitrogen mustard ((bis(2-chloroethyl)methylamine hydrochloride); PCNU ((1-(2-chloroethyl)-3-(2,6-dioxo-3-piperidinyl)- 1-Nitrourea); Piperazine alkylating agent (1-(2-chloroethyl)-4-(3-chloropropyl)-piperazine hydrochloride); Piperazine dione; Piperazine (N,N′-bis(3-bromopropionyl)piperazine); Boswelliacin (N-methylmitomycin C); Spiral hydantoin; Tarcenosol (triglycidyl isocyanurate); Tetra-Latin; Thiophosphate (N,N′,N″-tri-1,2-ethylenedimethylthiophosphoramide); Triethanolamine; Uracil nitrogen mustard; Yoshi-864 (bis(3-methoxypropyl)amine hydrochloride).
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是一种选自以下的DNA烷化样剂:顺铂;卡铂;奈达铂;奥沙利铂;沙铂;四硝酸三铂;丙卡巴肼;六甲胺;达卡巴嗪;米唑胺;替莫唑胺。In some embodiments, the drug portion of the anti-chemokine receptor or anti-CCR8 ADC is a DNA alkylating agent selected from the following: cisplatin; carboplatin; nedaplatin; oxaliplatin; saxaplatin; triplatin tetranitrate; procarbazine; hexamethylamine; dacarbazine; mirtazolamide; temozolomide.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是选自以下的烷基化抗肿瘤剂:碳醌;卡莫司汀;氯萘嗪;氯脲佐菌素;多卡霉素;异磷酰胺;福莫司汀;葡磷酰胺;洛莫司汀;甘露硫烷;尼莫司汀;菲铂;溴溴索;雷尼莫司汀;司马司汀;链脲佐菌素;硫特帕;硫丹;三亚醌;三乙烯三聚氰胺;三铂四硝酸盐。In some embodiments, the drug portion of the antichemokine receptor or anti-CCR8 ADC is selected from the following alkylated antitumor agents: carboquinone; carmustine; chlornaphthazine; chlorzoxacin; docamycin; isophosphoramide; formustine; glucosamine; lomustine; mannitol; nimustine; phenanthreneplatin; bromide; ranimustine; semastine; streptozotocin; thiotetrafluoroethylene; endosulfan; triquinone; triethylene melamine; triplatin tetranitrate.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是选自以下的DNA复制和修复抑制剂:六甲糖胺;博来霉素;达卡巴嗪;更生霉素;米托布罗糖醇;丝裂霉素;平阳霉素;普霉素;丙卡巴肼;替莫唑胺;ABT-888(veliparib);奥拉帕尼;KU-59436;AZD-2281;AG-014699;BSI-201;BGP-15;INO-1001;ONO-2231。In some embodiments, the drug portion of the anti-chemokine receptor or anti-CCR8 ADC is selected from the following DNA replication and repair inhibitors: hexamethasone; bleomycin; dacarbazine; styromycin; mitobronitol; mitomycin; bleomycin; propramycin; procarbazine; temozolomide; ABT-888 (veliparib); olaparib; KU-59436; AZD-2281; AG-014699; BSI-201; BGP-15; INO-1001; ONO-2231.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是细胞周期调节剂,例如紫杉醇;Nab-紫杉醇;多烯紫杉醇;长春新碱;长春碱;ABT-348;AZD-1152;MLN-8054;VX-680;Aurora A特异性激酶抑制剂;Aurora B特异性激酶抑制剂和泛Aurora激酶抑制剂;AZD-5438;BMI-1040;BMS-032;BMS-387;CVT-2584;黄酮吡啶醇;GPC-286199;MCS-5A;PD0332991;PHA-690509;seliciclib(CYC-202,R-roscovitines);ZK-304709;AZD4877,ARRY-520:GSK923295A。In some embodiments, the drug portion that is anti-chemokine receptor or anti-CCR8 ADC is a cell cycle regulator, such as paclitaxel; Nab-paclitaxel; docetaxel; vincristine; vinca alkaloid; ABT-348; AZD-1152; MLN-8054; VX-680; Aurora A-specific kinase inhibitor; Aurora B-specific kinase inhibitor and pan-Aurora kinase inhibitor; AZD-5438; BMI-1040; BMS-032; BMS-387; CVT-2584; flavonoid pyridinol; GPC-286199; MCS-5A; PD0332991; PHA-690509; seliciclib (CYC-202, R-roscovitines); ZK-304709; AZD4877; ARRY-520: GSK923295A.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是细胞凋亡调节剂,例如AT-101((-)棉酚);G3139或oblimersen(Bcl-2靶向反义寡核苷酸);IPI-194;IPI-565;N-(4-(4-((4′-氯(1,1′-联苯)-2-基)甲基)哌嗪-1-基苯甲酰基)-4-(((1R)-3-(二甲基氨基)-1-((苯硫基)甲基)丙基)氨基)-3-硝基苯磺酰胺;N-(4-(4-((2-(4-氯苯基)-5,5-二甲基-1-环己-1-en-1-基)甲基)哌嗪-1-基)苯甲酰基)-4-(((1R)-3-(吗啉-4-基)-1-((苯硫基)甲基)丙基)氨基)-3-((三氟甲基)磺酰基)苯磺酰胺;GX-070(1H-吲哚,2-(2-((3,5-二甲基-1H-吡咯-2-基)亚甲基)-3-甲氧基-2H-吡咯-5-基)-));HGS1029;GDC-0145;GDC-0152;LCL-161;LBW-242;维奈托克;靶向TRAIL或死亡受体(例如DR4和DR5)的药物,例如ETR2-ST01、GDC0145、HGS-1029、LBY-135、PRO-1762;靶向半胱天冬酶、半胱天冬酶调节剂、BCL-2家族成员、死亡结构域蛋白、TNF家族成员、Toll家族成员和/或NF-kappa-B蛋白的药物。In some embodiments, the drug portion that inhibits chemokine receptors or CCR8 ADCs is an apoptosis regulator, such as AT-101 ((-)gossypol); G3139 or oblimersen (Bcl-2-targeting antisense oligonucleotide); IPI-194; IPI-565; N-(4-(4-((4′-chloro(1,1′-biphenyl)-2-yl)methyl)piperazin-1-ylbenzoyl)-4-(((1R)-3-(dimethylamino)-1-((phenylthio)methyl)propyl)amino)-3-nitrobenzenesulfonamide; N-(4-(4-((2-(4-chlorophenyl)-5,5-dimethyl-1-cyclohexyl-1-en-1-yl)methyl)piperazin-1-yl)benzoyl)-4-(((1R)-3-(morpholin-4-yl)-1-((phenylthio)methyl) (3,5-dimethyl-1H-pyrrolo-2-yl)methylene)-3-methoxy-2H-pyrrolo-5-yl)-)); HGS1029; GDC-0145; GDC-0152; LCL-161; LBW-242; Venetoclax; Drugs targeting TRAIL or death receptors (e.g., DR4 and DR5), such as ETR2-ST01, GDC0145, HGS-1029, LBY-135, PRO-1762; Drugs targeting caspase, caspase modulators, BCL-2 family members, death domain proteins, TNF family members, Toll family members, and/or NF-kappa-B proteins.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是血管生成抑制剂,例如ABT-869;AEE-788;阿昔替尼(AG-13736);AZD-2171;CP-547,632;IM-862;pegaptamib;索拉非尼;BAY43-9006;帕唑帕尼(GW-786034);vatalanib(PTK-787,ZK-222584);舒尼替尼;SU-11248;VEGF陷阱(trap);凡德他尼;ABT-165;ZD-6474;DLL4抑制剂。In some implementations, the drug component that inhibits chemokine receptors or CCR8 ADCs is an angiogenesis inhibitor, such as ABT-869; AEE-788; axitinib (AG-13736); AZD-2171; CP-547,632; IM-862; pegaptamib; sorafenib; BAY43-9006; pazopanib (GW-786034); vatalanib (PTK-787, ZK-222584); sunitinib; SU-11248; VEGF trap; vandetanib; ABT-165; ZD-6474; and DLL4 inhibitors.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是一种蛋白酶体抑制剂,例如硼替佐米;卡非佐米;环氧霉素;伊沙佐米;盐孢菌胺A。In some embodiments, the drug portion that is anti-chemokine receptor or anti-CCR8 ADC is a proteasome inhibitor, such as bortezomib; carfilzomib; cyclooxygenin; ixazomib; halosporin A.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是一种激酶抑制剂,例如阿法替尼;阿昔替尼;博舒替尼;克唑替尼;达沙替尼;厄洛替尼;福斯塔替尼;吉非替尼;依鲁替尼;伊马替尼;拉帕替尼;乐伐替尼;穆布替尼;尼洛替尼;帕唑帕尼;培加他尼;索拉非尼;舒尼替尼;SU6656;凡德他尼;维罗非尼;CEP-701(来沙替尼);XL019;INCB018424(卢索替尼);ARRY-142886(塞来替尼);ARRY-438162(比尼美替尼);PD-325901;PD-98059;AP-23573;CCI-779;依维莫司;RAD-001;雷帕霉素;替西罗莫司;ATP竞争性TORC1/TORC2抑制剂,包括PI-103,PP242,PP30,Torin 1;LY294002;XL-147;CAL-120;ONC-21;AEZS-127;ETP-45658;PX-866;GDC-0941;BGT226;BEZ235;XL765。In some implementations, the drug portion that inhibits chemokine receptors or CCR8 ADCs is a kinase inhibitor, such as afatinib; axitinib; bosutinib; crizotinib; dasatinib; erlotinib; fostatinib; gefitinib; ibrutinib; imatinib; lapatinib; lenvatinib; mubutinib; nilotinib; pazopanib; peragatanib; sorafenib; sunitinib; SU6656; vandetanib; vemurafenib; CEP-701 (lesatinib); XL019; INCB018424 (ruxotetinib); ARRY-142886 (celetinib); ARRY -438162 (Binimetinib); PD-325901; PD-98059; AP-23573; CCI-779; Everolimus; RAD-001; Rapamycin; Tessiromolimus; ATP-competitive TORC1/TORC2 inhibitors, including PI-103, PP242, PP30, Torin 1; LY294002; XL-147; CAL-120; ONC-21; AEZS-127; ETP-45658; PX-866; GDC-0941; BGT226; BEZ235; XL765.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是蛋白质合成抑制剂,例如链霉素;双氢链霉素;新霉素;弗拉霉素;巴龙霉素;核糖霉素;卡那霉素;阿米卡星;阿贝卡星;贝卡那霉素;地贝卡星;妥布霉素;壮观霉素;潮霉素B;巴龙霉素;庆大霉素;奈替米星;西索米星;异帕米星;虫草霉素;星霉素;四环素;强力霉素;氯四环素;氯霉素;去甲金霉素;赖甲环素;甲氧环素;甲环素;米诺环素;土霉素;青霉环素;罗利四环素;四环素;甘氨酰环素;替加环素;恶唑烷酮类;哌唑酯;利奈唑胺;苯唑胺;雷地唑胺;兰贝唑胺;舒特唑胺;泰地唑胺;肽基转移酶抑制剂;氯霉素;阿齐达米考;甲砜霉素;氟苯尼考;侧耳素;瑞他莫林;泰妙菌素;沃尼穆林;阿奇霉素;克拉霉素;地红霉素;红霉素;氟红霉素;交沙霉素;麦迪霉素;米卡霉素;竹桃霉素;罗他霉素;罗红霉素;螺旋霉素;醋竹桃霉素;泰乐菌素;酮内酯;泰利霉素;赛红霉素;索利霉素;克林霉素;林可霉素;吡利霉素;链霉素;原始霉素;奎奴普汀/达福普汀;弗吉尼亚霉素。In some embodiments, the drug portion that inhibits chemokine receptors or CCR8 ADCs is a protein synthesis inhibitor, such as streptomycin; dihydrostreptomycin; neomycin; flammycin; paromomycin; ribostamycin; kanamycin; amikacin; abekacin; bekanamycin; dibekacin; tobramycin; spectinomycin; hygromycin B; paromomycin; gentamicin; netilmicin; sisomicin; isipamicin; cordycepsmycin; astromycin; tetracycline; doxycycline; chlortetracycline; chloramphenicol; demethylchlortetracycline; lysine; methoxycycline; methylcycline; minocycline; oxytetracycline; penicillin; rolitetracycline; tetracycline; glycylcycline; tigecycline. Oxazolidinones; Piperazolamide; Linezolid; Oxazolamide; Redizolamide; Lanbezolid; Sultezolid; Tedizolamide; Peptidyl transferase inhibitors; Chloramphenicol; Azidamico; Thiamphenicol; Florfenicol; Pleurotus ostreatus; Retamoline; Tiamulin; Vonimulin; Azithromycin; Clarithromycin; Dierythromycin; Erythromycin; Fluerythromycin; Josamycin; Midecamycin; Micardiitis; Pyruvicin; Rotamycin; Roxithromycin; Spiramycin; Pyruvicin; Ketoconazole; Telithromycin; Cyerythromycin; Solithromycin; Clindamycin; Lincomycin; Pirimibromycin; Streptomycin; Primalmycin; Quinupertin/Dalfopristin; Virginiamycin.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是组蛋白去乙酰化酶抑制剂,例如伏立诺他;罗米地辛;西达本胺;帕比司他;丙戊酸;贝利司他;莫西司他;abexinostat;恩替司他;SB939(pracinostat);瑞米司他;吉维司他;奎辛司他;硫脲基丁腈(KevetrinTM);CUDC-10;CHR-2845(替非司他);CHR-3996;4SC-202;CG200745;ACY-1215(罗西林司他);ME-344;萝卜硫素。In some embodiments, the drug portion that inhibits chemokine receptors or CCR8 ADCs is a histone deacetylase inhibitor, such as vorinostat; romidesin; chidamide; pabisostat; valproic acid; belistat; moxistat; abexinostat; entecavir; SB939 (pracinostat); remistat; gilvestartar; quinacrinestat; thiourea-butyronitrile (Kevetrin ™ ); CUDC-10; CHR-2845 (tefilstat); CHR-3996; 4SC-202; CG200745; ACY-1215 (roxilinstat); ME-344; sulforaphane.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是拓扑异构酶I抑制剂,例如喜树碱;各种喜树碱衍生物和类似物(例如,NSC 100880,NSC 603071,NSC107124,NSC 643833,NSC 629971,NSC 295500,NSC 249910,NSC 606985,NSC 74028,NSC176323,NSC 295501,NSC 606172,NSC 606173,NSC 610458,NSC 618939,NSC 610457,NSC610459,NSC 606499,NSC 610456,NSC 364830,and NSC 606497);吗啉异柔比星;SN-38。In some embodiments, the drug fraction that inhibits chemokine receptors or CCR8 ADCs is a topoisomerase I inhibitor, such as camptothecin; various camptothecin derivatives and analogs (e.g., NSC 100880, NSC 603071, NSC107124, NSC 643833, NSC 629971, NSC 295500, NSC 249910, NSC 606985, NSC...). 74028, NSC176323, NSC 295501, NSC 606172, NSC 606173, NSC 610458, NSC 618939, NSC 610457, NSC610459, NSC 606499, NSC 610456, NSC 364830, and NSC 606497); Morphyrin isoxastatin; SN-38.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是拓扑异构酶II抑制剂,例如多柔比星;amonafide(苯并异喹啉二酮);m-AMSA(4′-(9-吖啶基氨基)-3′-甲氧基甲磺酰苯胺);蒽吡唑衍生物((NSC 355644);依托泊苷(VP-16);吡唑并吖啶((吡唑并[3,4,5-kl]吖啶-2(6H)-丙胺,9-甲氧基-N,N-二甲基-5-硝基-,单甲磺酸盐);盐酸比生群;柔红霉素;脱氧阿霉素;米托蒽醌;美诺加林;N,N-二苄柔红霉素;奥蒽唑;鲁必达宗;替尼泊苷。In some embodiments, the drug portion that resists chemokine receptors or CCR8 ADCs is a topoisomerase II inhibitor, such as doxorubicin; amonafide (benzisoquinolinedione); m-AMSA (4′-(9-acridylamino)-3′-methoxymethanesulfonylaniline); anthraquinone derivative ((NSC 355644); etoposide (VP-16); pyrazoloacridin ((pyrazolo[3,4,5-kl]acridin-2(6H)-propylamine, 9-methoxy-N,N-dimethyl-5-nitro-,monosulfonate); piracetam hydrochloride; daunorubicin; deoxydaunorubicin; mitoxantrone; minogalin; N,N-dibenzyldaunorubicin; orantrone; rubidazine; teniposide.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是DNA嵌入剂,例如蒽霉素;奇霉素A;托马霉素;DC-81;西布罗霉素;吡咯并二氮杂吡啶衍生物;SGD-1882((S)-2-(4-氨基苯基)-7-甲氧基-8-(3S)-7-乙氧基-2-(4-甲氧基苯基)-5-氧代-5,11-二氢-1H-苯并[e]吡咯并[1,2-a][1,4]二氮杂辛-8-基)氧基)丙氧基)-1H苯并[e]吡咯并[1,2-a][1,4]氮杂辛-5(11aH)-酮);SG2000(SJG-136;(11a S,11a′S)-8,8′-(丙烷-1,3-二基双(氧基))双(7-甲氧基-2-亚甲基-2,3-二氢-1H-苯并[e]吡咯并[1,2-a][1,4]二氮杂-5(11aH)-酮))。In some embodiments, the drug portion that is anti-chemokine receptor or anti-CCR8 ADC is a DNA intercalating agent, such as anthramycin; zithromycin A; tomatine; DC-81; sibromycin; pyrrolodiazapyridine derivatives; SGD-1882((S)-2-(4-aminophenyl)-7-methoxy-8-(3S)-7-ethoxy-2-(4-methoxyphenyl)-5-oxo-5,11-dihydro-1H-benzo[e]pyrrolo[1,2-a][1] ,4] diazaoct-8-yl)oxy)propoxy)-1H benzo[e]pyrrolo[1,2-a][1,4] diazaoct-5(11aH)-one); SG2000(SJG-136; (11a S, 11a′S)-8,8′-(propane-1,3-diylbis(oxy))bis(7-methoxy-2-methylene-2,3-dihydro-1H-benzo[e]pyrrolo[1,2-a][1,4] diaza-5(11aH)-one)).
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是RNA/DNA抗代谢物,例如L-腺苷;5-氮杂胞苷;5-氟尿嘧啶;阿西维素;氨基蝶呤衍生物N-[2-氯-5[[(2,4-二氨基-5-甲基-6-喹唑啉基)甲基]氨基]苯甲酰基]L-天冬氨酸(NSC 132483);氨基蝶呤衍生物N-[4-[[(2,4--二氨基-5-乙基-6-喹唑啉基)甲基]氨基]苯甲酰基]L-天冬氨酸;氨基蝶呤衍生物N-[2-氯-4-[[(2,4-二氨基-6-蝶啶基)甲基]氨基]苯甲酰基]L-天冬氨酸一水合物;抗叶酸剂PT523((Nα-(4-氨基-4-脱氧蝶酰基)-Nγ-半邻苯二甲酰基-L-鸟氨酸));Baker的可溶性抗叶酸(NSC 139105);二氯烯丙基劳松((2-(3,3-二氯烯基)-3-羟基-1,4-萘醌);布雷奎纳;氟替呋((前药;5-氟-1-(四氢-2-呋喃基)-尿嘧啶);5,6-二氢-5-氮杂胞苷;甲氨蝶呤;甲氨蝶呤衍生物(N-[[4-[[(2,4-二氨基-6-蝶啶基)甲基]甲基氨基]-1-萘基]羰基]-L-谷氨酸);PALA((N-(膦酰基)-L-天冬氨酸);吡唑福林;甲氨蝶呤。In some embodiments, the drug portion that inhibits chemokine receptors or CCR8 ADCs is an RNA/DNA antimetabolite, such as L-adenosine; 5-azacytidine; 5-fluorouracil; acevir; aminopterin derivative N-[2-chloro-5-[[(2,4-diamino-5-methyl-6-quinazolinyl)methyl]amino]benzoyl]L-aspartic acid (NSC 132483); aminopterin derivative N-[4-[[(2,4-diamino-5-ethyl-6-quinazolinyl)methyl]amino]benzoyl]L-aspartic acid; aminopterin derivative N-[2-chloro-4-[[(2,4-diamino-6-pteridyl)methyl]amino]benzoyl]L-aspartic acid monohydrate; anti- Folic acid PT523 ((Nα-(4-amino-4-deoxypteroyl)-Nγ-hemiphthaloyl-L-ornithine)); Baker's soluble antifolic acid (NSC 139105); dichloroallylloxacin ((2-(3,3-dichloroenyl)-3-hydroxy-1,4-naphthoquinone); Brefinar; flutifu ((prodrug; 5-fluoro-1-(tetrahydro-2-furanyl)-uracil); 5,6-dihydro-5-azacytidine; methotrexate; methotrexate derivative (N-[[4-[[(2,4-diamino-6-pterodinyl)methyl]methylamino]-1-naphthyl]carbonyl]-L-glutamic acid); PALA ((N-(phosphonyl)-L-aspartic acid); pyrazolylphosphonate; methotrexate.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是DNA抗代谢物,例如3-HP;2′-脱氧-5-氟尿苷;5-HP;α-TGDR(α-2′-脱氧6-硫鸟苷);阿非迪霉素甘氨酸盐;araC(阿糖胞苷);5-aza-2′-脱氧胞苷;β-TGDR(β-2′-脱氧6-硫鸟苷);环胞苷;胍唑;羟基脲;肌苷糖二醛;麦克菌素II;吡唑并咪唑;硫鸟嘌呤;硫嘌呤。In some embodiments, the drug portion of the antichemokine receptor or anti-CCR8 ADC is a DNA antimetabolite, such as 3-HP; 2′-deoxy-5-fluorouridine; 5-HP; α-TGDR (α-2′-deoxy-6-thioguanosine); afedipine glycinate; araC (cytarabine); 5-aza-2′-deoxycytidine; β-TGDR (β-2′-deoxy-6-thioguanosine); cyclocytidine; guanidine; hydroxyurea; inosylglycodialdehyde; maculin II; pyrazoimidazole; thioguanine; thiopurine.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是线粒体抑制剂,例如胰酶抑素;苯潘他汀;罗丹明-123;雪草碱;d-α-生育酚琥珀酸酯;化合物11β;阿司匹林;椭圆菌素;黄连素;天青素;GX015-070(1H-吲哚,2-(2-((3,5-二甲基-1H-吡咯-2-基)亚甲基)-3-甲氧基-2H-吡咯-5-基)-);雷公藤酚(雷公藤碱);二甲双胍;亮绿色;ME-344。In some embodiments, the drug component that inhibits chemokine receptors or CCR8 ADCs is a mitochondrial inhibitor, such as trypsin; benpanstatin; rhodamine-123; senna; d-α-tocopherol succinate; compound 11β; aspirin; elutin; berberine; azuril; GX015-070(1H-indole, 2-(2-((3,5-dimethyl-1H-pyrrolo-2-yl)methylene)-3-methoxy-2H-pyrrolo-5-yl)-); tripterygium oleate; metformin; bright green; ME-344.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是抗有丝分裂剂,例如别秋水仙碱;auristatin,例如MMAE(单甲基auristatin E)和MMAF(单甲基auristatinF);软海绵素B;西马多汀;秋水仙碱;秋水仙碱衍生物(N-苯甲酰-脱乙酰基苯甲酰胺);海兔毒素10;海兔毒素15;美登素;美登木素生物碱,例如DM1(N2′-脱乙酰基-N2′-(3-巯基-1-氧代丙基)-美登素);罗佐辛;紫杉醇;紫杉醇衍生物((2′-N-[3-(二甲基氨基)丙基]戊二酸紫杉醇);多烯紫杉醇;硫秋水仙碱;三苯甲基半胱氨酸;硫酸长春碱;硫酸长春新碱。In some embodiments, the drug portion that inhibits chemokine receptors or CCR8 ADCs is an antimitotic agent, such as allocolchicine; auristatin, such as MMAE (monomethyl auristatin E) and MMAF (monomethyl auristatin F); squalane B; simadotine; colchicine; colchicine derivatives (N-benzoyl-deacetylated benzamide); slug toxin 10; slug toxin 15; maytansine; maytansine alkaloids, such as DM1 (N2′-deacetylated-N2′-(3-mercapto-1-oxopropyl)-matansine); rosocine; paclitaxel; paclitaxel derivatives ((2′-N-[3-(dimethylamino)propyl]glutaric acid paclitaxel); docetaxel; thiocolchicine; triphenylmethylcysteine; vincristine sulfate; vincristine sulfate.
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是一种核输出抑制剂,例如callystatin A;内酯霉素;KPT-185(丙-2-基(Z)-3-[3-[3-甲氧基-5-(三氟甲基)苯基]-1,2,4-三唑-1-基]丙-2-烯酸酯);卡苏霉素A;瘦素;钩端呋喃A;来普霉素B;拉贾酮;Verdinexor((Z)-3-[3-[3,5-双(三氟甲基)苯基]-1,2,4-三唑-1-基]-N-吡啶-2-基丙基-2-烯酰肼)。In some embodiments, the drug portion that is anti-chemokine receptor or anti-CCR8 ADC is a nuclear export inhibitor, such as callystatin A; lactamycin; KPT-185 (propyl-2-yl(Z)-3-[3-[3-methoxy-5-(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]propyl-2-enoate); cassumycin A; leptin; leptofuran A; leptomycin B; rajadone; Verdinexor ((Z)-3-[3-[3,5-bis(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]-N-pyridin-2-ylpropyl-2-enoate).
在一些实施方式中,抗趋化因子受体或抗CCR8 ADC的药物部分是激素治疗剂,例如阿那曲唑;依西美坦;阿佐昔芬;比卡鲁胺;西曲瑞克;地加瑞克;地洛瑞林;三氯烷;地塞米松;氟他胺;雷洛昔芬;法唑;托瑞米芬;氟维司群;来曲唑;福美坦;糖皮质激素;阿霉素;司维拉姆碳酸盐;拉索昔芬;醋酸亮丙瑞林;甲地孕酮;米非司酮;尼鲁米特;柠檬酸他莫昔芬;阿巴瑞克;强的松;非那雄胺;利洛司坦;布舍瑞林;促黄体激素释放激素(LHRH);组胺;曲洛司坦或莫德拉斯坦;佛瑞林;戈舍瑞林。In some implementations, the drug portion that inhibits chemokine receptors or CCR8 ADCs is a hormonal therapeutic agent, such as anastrozole; exemestane; azoxifen; bicalutamide; cetrorex; degarelix; dilorelin; trichloroethane; dexamethasone; flutamide; raloxifene; fazodone; toremifene; fulvestrant; letrozole; formetanin; glucocorticoids; doxorubicin; sevelamer carbonate; lasoxifene; leuprorelin acetate; medroxyprogesterone acetate; mifepristone; nilumet; tamoxifen citrate; abalinic acid; prednisone; finasteride; lilosterone; buterelin; luteinizing hormone-releasing hormone (LHRH); histamine; trelosterone or modrastan; frenelin; goserelin.
这些试剂中的任何一种包括,或可以被修饰以包括,与抗体和/或结合片段的连接位点,其可以被包括在抗趋化因子受体ADC中,例如在抗CCR8 ADC中。Any of these reagents includes, or can be modified to include, a linking site with an antibody and/or binding fragment, which may be included in an anti-chemokine receptor ADC, such as in an anti-CCR8 ADC.
CAR T细胞CAR T cells
根据第十九方面的一些第三实施方式,缀合物是为趋化因子受体或CCR8靶向而工程化的CAR T细胞缀合物。最近,CAR T细胞因其临床成功而受到关注,并加快了FDA的批准,参见WO2020102240,其全部内容通过引用并入本文。在CAR T细胞方法中,T细胞是从患者血液中收集的,然后经过基因工程化以表达对肿瘤细胞上存在的抗原具有特异性的CAR。然后将这些经过工程化的T细胞重新施用于同一位患者。注射后,CAR T细胞识别靶细胞上的靶抗原以诱导靶细胞死亡。因此,表达嵌合抗原受体的T细胞(CAR T细胞)构成了一种用于肿瘤治疗等医学用途的新模式。嵌合抗原受体(CAR)是一种基因工程受体,旨在靶向特定抗原,例如肿瘤抗原。这种靶向可导致针对肿瘤的细胞毒性,例如,使得表达CAR的CAR T细胞可以通过特定的肿瘤抗原靶向并杀死肿瘤。According to some third embodiments of the nineteenth aspect, the conjugate is a CAR T cell conjugate engineered for targeting a chemokine receptor or CCR8. Recently, CAR T cells have gained attention due to their clinical success and accelerated FDA approval (see WO2020102240, the entire contents of which are incorporated herein by reference). In the CAR T cell approach, T cells are collected from a patient's blood and then genetically engineered to express a CAR that is specific to antigens present on tumor cells. These engineered T cells are then re-administered to the same patient. After injection, the CAR T cells recognize the target antigen on the target cells to induce target cell death. Thus, T cells expressing chimeric antigen receptors (CAR T cells) constitute a novel modality for medical applications such as cancer therapy. A chimeric antigen receptor (CAR) is a genetically engineered receptor designed to target specific antigens, such as tumor antigens. This targeting can lead to cytotoxicity against tumors, for example, enabling CAR T cells expressing CARs to target and kill tumors via specific tumor antigens.
根据本发明,为CCR8或趋化因子受体识别提供的抗体或抗原结合片段可用于工程化CAR T细胞以特异性识别CCR8表达细胞或表达相应趋化因子受体的细胞。根据本发明的CAR可以包括According to the present invention, antibodies or antigen-binding fragments provided for CCR8 or chemokine receptor recognition can be used to engineer CAR T cells to specifically recognize CCR8-expressing cells or cells expressing the corresponding chemokine receptors. The CAR according to the present invention may include...
a)识别区,例如源自提供的抗CCR8或抗趋化因子受体抗体的单链片段可变区(scFv),用于识别和结合靶细胞表达的CCR8或趋化因子受体,和a) A recognition region, such as a single-chain variable region (scFv) derived from a provided anti-CCR8 or anti-chemokine receptor antibody, for recognizing and binding to the CCR8 or chemokine receptor expressed on target cells, and
b)激活信号结构域,例如T细胞的CD3链,可作为CAR中的T细胞激活信号。b) Activation signaling domains, such as the CD3 chain of T cells, can serve as T cell activation signals in CARs.
优选地,根据本发明的CAR包含共刺激结构域(例如,CD137、CD28或CD134)以在体内实现T细胞的延长激活。添加共刺激结构域可增强含有CAR的T细胞的体内增殖和存活,初步临床数据表明,此类构建体是治疗癌症等疾病的有前途的治疗剂。根据本发明,CAR T细胞可用于治疗局部或全身异常存在表达靶趋化因子受体的细胞(特别是CCR8表达细胞,例如Treg细胞)的任何疾病。Preferably, the CAR according to the invention comprises a co-stimulatory domain (e.g., CD137, CD28, or CD134) to achieve prolonged activation of T cells in vivo. The addition of the co-stimulatory domain enhances the in vivo proliferation and survival of CAR-containing T cells, and preliminary clinical data suggest that such constructs are promising therapeutic agents for diseases such as cancer. According to the invention, CAR T cells can be used to treat any disease in which locally or systemically abnormal cells expressing target chemokine receptors (particularly CCR8-expressing cells, such as Treg cells) are present.
双特异性Bispecific
根据第十九方面的一些第四实施方式,缀合物是双特异性抗体或多特异性抗体。在一些优选方的实施方式中,双特异性抗体包含至少一个Fc结构域。According to some fourth embodiments of the nineteenth aspect, the conjugate is a bispecific antibody or a multispecific antibody. In some preferred embodiments, the bispecific antibody comprises at least one Fc domain.
在第十九方面的一些优选实施方式中,双特异性抗体的第一结合部分是根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段。In some preferred embodiments of the nineteenth aspect, the first binding portion of the bispecific antibody is an antibody or antigen binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18.
在第十九方面的第四实施方式的一些实施方式A中,双特异性抗体的第一结合部分是根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,双特异性抗体的第二结合部分是根据第6、7、8、9、1O、11、12、13、14、15、16、17和/或18方面的相同或不同的抗体或抗原结合片段。In some embodiments A of the fourth embodiment of the nineteenth aspect, the first binding portion of the bispecific antibody is an antibody or antigen binding fragment based on aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, and the second binding portion of the bispecific antibody is the same or different antibody or antigen binding fragment based on aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18.
在第十九方面的第四实施方式的一些实施方式B中,双特异性抗体的第一结合部分是结合人CCR8的根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18的抗体或抗原结合片段,和双特异性抗体的第二结合部分是结合不同趋化因子受体如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1的抗体或抗原结合片段。双特异性抗体的第二结合部分是Mogamulizumab或其抗原结合片段。In some embodiments B of the fourth embodiment of the nineteenth aspect, the first binding portion of the bispecific antibody is an antibody or antigen-binding fragment binding to human CCR8 according to the 6th, 7th, 8th, 9th, 10th, 11th, 12th, 13th, 14th, 15th, 16th, 17th and/or 18th antibodies, and the second binding portion of the bispecific antibody is an antibody or antigen-binding fragment binding to different chemokine receptors such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1 or CXCR1. The second binding portion of the bispecific antibody is Mogamulizumab or its antigen-binding fragment.
在第十九方面的第四实施方式的一些实施方式C中,双特异性抗体的第一结合部分是根据第6、7、8、9、10、11、12、13、14、15、16、17、18方面的抗体或抗原结合片段,和双特异性抗体的第二结合部分是结合细胞表面蛋白例如免疫细胞或组织上表达的细胞表面蛋白-或细胞类型特异性抗原的抗体或抗原结合片段或。在其中一些实施方式中,双特异性抗体的第二结合部分是靶向检查点蛋白的抗体或抗原结合片段,例如抗PD1抗体、抗PD-L1抗体或CTLA-4抗体。Nivolumab,Pembrolizumab,Atezolizumab,Avelumab,Durvalumab,Cemiplimab,Dostarlimab,或Ipilimumab。在这些实施方式的一些其他实施方式中,双特异性抗体的第二结合部分是HER2靶向抗体,Trastuzumab,Pertuzumab和/或Margetuximab。In some embodiments C of the fourth embodiment of the nineteenth aspect, the first binding portion of the bispecific antibody is an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, and 18, and the second binding portion of the bispecific antibody is an antibody or antigen-binding fragment that binds to cell surface proteins, such as cell surface proteins expressed on immune cells or tissues—or cell type-specific antigens. In some embodiments, the second binding portion of the bispecific antibody is an antibody or antigen-binding fragment targeting a checkpoint protein, such as an anti-PD1 antibody, an anti-PD-L1 antibody, or a CTLA-4 antibody. Other examples include Nivolumab, Pembrolizumab, Atezolizumab, Avelumab, Durvalumab, Cemiplimab, Dostarlimab, or Ipilimumab. In some other embodiments of these embodiments, the second binding portion of the bispecific antibody is a HER2-targeting antibody, Trastuzumab, Pertuzumab, and/or Margetuximab.
在第十九方面的第四实施方式的一些实施方式D中,双特异性抗体的第一结合部分是根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18的抗体或抗原结合片段,优选地结合CCR8,和双特异性抗体的第二结合部分是结合与T细胞激活相关的细胞表面分子的抗体或抗原结合片段,优选地选自CD25、CTLA-4、PD-1、LAG3、TIGIT、ICOS、TNF受体超家族成员、4-1BB、OX-40、GITR。In some embodiments D of the fourth embodiment of the nineteenth aspect, the first binding portion of the bispecific antibody is an antibody or antigen-binding fragment of the 6th, 7th, 8th, 9th, 10th, 11th, 12th, 13th, 14th, 15th, 16th, 17th and/or 18th, preferably binding to CCR8, and the second binding portion of the bispecific antibody is an antibody or antigen-binding fragment that binds to cell surface molecules associated with T cell activation, preferably selected from CD25, CTLA-4, PD-1, LAG3, TIGIT, ICOS, TNF receptor superfamily members, 4-1BB, OX-40, GITR.
制备双特异性或多特异性抗体的技术包括但不限于重组共表达具有不同特异性的两个免疫球蛋白重链-轻链对(参见Milstein and Cuello.″Hybrid hybridomas andtheir use in immunohistochemistry.″Nature 305.5934(1983):537-540.;WO1993008829 A1,和Traunecker,André,Antonio Lanzavecchia,and KlausKarjalainen.″Bispecific single chain molecules(Janusins)target cytotoxiclymphocytes on HIV infected cells.″The EMBO Journal 10.12(1991):3655-3659.),和两种不同单克隆抗体的化学偶联(参见Staerz,Uwe D.,Osami Kanagawa,and MichaelJ.Bevan.″Hybrid antibodies can target sites for attack by T cells.″Nature314.6012(1985):628-631)。多特异性抗体也可以通过交联两种或多种抗体或片段来制备(参见例如,US Patent No.4,676,980,和Brennan,Maureen,Peter F.Davison,and HenryPaulus.″Preparation of bispecific antibodies by chemical recombination ofmonoclonal immunoglobulin G1 fragments.″Science 229.4708(1985):81-83),使用亮氨酸拉链来产生双特异性抗体(参见例如Kostelny,Sheri A.,M.S.Cole,and J.Yun Tso.″Formation of a bispecific antibody by the use of leucine zippers.″The Journalof Immunology148.5(1992):1547-1553.),使用双抗体技术制备双特异性抗体片段(参见例如,Holliger,Philipp,Terence Prospero,and Greg Winter.″″Diabodies″:smallbivalent and bispecific antibody fragments.″Proceedings of the NationalAcademy of Sciences 90.14(1993):6444-6448),使用单链Fv(sFv)二聚体(.Gruber,Meegan,et al.″Efficient tumor cell lysis mediated by a bispecific singlechain antibody expressed in Escherichia coli.″The Journal of immunology152.11(1994):5368-5374.),通过所描述制备三特异性抗体(例如,在in Tutt,Alison,G.T.Stevenson,and M.J.Glennie.″Trispecific F(ab′)3derivatives that usecooperative signaling via the TCR/CD3 complex and CD2 to activate andredirect resting cytotoxic T cells.″The Journal of Immunology 147.1(1991):60-69.),以及根据Labrijn,Aran F.,et al.″Efficient generation of stable bispecificIgG1 by controlled Fab-arm exchange.″Proceedings of the National Academy ofSciences 110.13(2013):5145-5150的受控的Fab臂交换(cFAE)。Techniques for preparing bispecific or multispecific antibodies include, but are not limited to, recombinant co-expression of two immunoglobulin heavy-light chain pairs with different specificities (see Milstein and Cuello. "Hybrid hybrids and their use in immunohistochemistry." Nature 305.5934(1983): 537-540.; WO1993008829 A1, and Traunecker, André, Antonio Lanzavecchia, and Klaus Karjalainen. "Bispecific single chain mol Ecules (Janusins) target cytotoxic lymphocytes on HIV-infected cells. "The EMBO Journal 10.12 (1991): 3655-3659.), and chemical conjugation of two different monoclonal antibodies (see Staerz, Uwe D., Osami Kanagawa, and Michael J. Bevan. "Hybrid antibodies can target sites for attack by T cells. "Nature 314.6012 (1985): 628-631). Multispecific antibodies can also be prepared by crosslinking two or more antibodies or fragments (see, for example, US Patent No. 4,676,980, and Brennan, Maureen, Peter F. Davison, and Henry Paulus. "Preparation of bispecific antibodies by chemical recombination of monoclonal immunoglobulin G1 fragments." Science 229.4708(1985): 81-83), using leucine zippers to generate bispecific antibodies (see, for example, Kostelny, Sheri A., M.S. Cole, and J. Yun Tso. "Formation o f a bispecific antibody by the use of leucine zippers. "The Journal of Immunology 148.5 (1992): 1547-1553.), bispecific antibody fragments were prepared using biantibody technology (see, for example, Holliger, Philipp, Terence Prospero, and Greg Winter. "Diabodies: small bivalent and bispecific antibody fragments. "Proceedings of the National Academy of Sciences 90.14 (1993): 6444-6448), using single-chain Fv ( The sFv) dimer (Gruber, Meegan, et al. "Efficient tumor cell lysis mediated by a bispecific single-chain antibody expressed in Escherichia coli." The Journal of Immunology 152.11 (1994): 5368-5374.) was prepared by the preparation of trispecific antibodies as described (e.g., in Tutt, Alison, G.T. Stevenson, and M.J. Glennie. "Trispecific F(ab′)3 derivatives that use cooperative signaling via t The TCR/CD3 complex and CD2 to activate and redirect resting cytotoxic T cells. "The Journal of Immunology 147.1 (1991): 60-69.), and according to Labrijn, Aran F., et al. "Efficient generation of stable bispecific IgG1 by controlled Fab-arm exchange." Proceedings of the National Academy of Sciences 110.13 (2013): 5145-5150.
用于诊断和研究应用的缀合物Conjugates for diagnostic and research applications
根据第十九方面的一些第五实施方式,缀合物包含可检测部分。可检测部分的实例包括各种酶、辅基、荧光材料、发光材料、生物发光材料、放射性材料、正电子发射金属、非放射性顺磁金属离子和反应性部分。可检测物质可以直接或间接偶联或缀合至抗体或其片段,例如,通过本领域已知的接头或另一部分,使用本领域已知的技术。酶标记的实例包括萤光素酶(例如,萤火虫萤光素酶和细菌萤光素酶;US Pat.No.4,737,456)、萤光素、2,3-二氢酞嗪二酮、苹果酸脱氢酶、脲酶、过氧化物酶如辣根过氧化物酶(HRPO)、碱性磷酸酶、β-半乳糖苷酶、乙酰胆碱酯酶、葡糖淀粉酶、溶菌酶、糖类氧化酶(例如葡萄糖氧化酶、半乳糖氧化酶和葡萄糖-6-磷酸脱氢酶)、杂环氧化酶(例如尿酸酶和黄嘌呤氧化酶)、乳过氧化物酶、微过氧化物酶等。According to some fifth embodiments of the nineteenth aspect, the conjugate includes a detectable portion. Examples of detectable portions include various enzymes, prosthetic groups, fluorescent materials, luminescent materials, bioluminescent materials, radioactive materials, positron-emitting metals, non-radioactive paramagnetic metal ions, and reactive portions. The detectable substance can be directly or indirectly coupled or conjugated to an antibody or a fragment thereof, for example, through a connector or another portion known in the art, using techniques known in the art. Examples of enzyme-labeled enzymes include luciferases (e.g., firefly luciferase and bacterial luciferase; US Pat. No. 4,737,456), luciferin, 2,3-dihydrophthalazinedione, malate dehydrogenase, urease, peroxidases such as horseradish peroxidase (HRPO), alkaline phosphatase, β-galactosidase, acetylcholinesterase, glucosylamylase, lysozyme, carbohydrate oxidases (e.g., glucose oxidase, galactose oxidase, and glucose-6-phosphate dehydrogenase), heterocyclic oxidases (e.g., uricase and xanthine oxidase), lactoperoxidase, microperoxidase, etc.
合适的辅基复合物的实例包括链霉亲和素/生物素和抗生物素/生物素;合适的荧光材料的实例包括伞形酮、荧光素、异硫氰酸荧光素、罗丹明、二氯三嗪胺荧光素、丹磺酰氯或藻红蛋白;发光材料的实例包括鲁米诺;生物发光材料的例子包括荧光素酶、荧光素和水母发光蛋白;合适的放射性物质的实例包括125I、131I、111In或99mTc。Examples of suitable cofactor complexes include streptavidin/biotin and avidin/biotin; examples of suitable fluorescent materials include umbelliferone, luciferin, luciferin isothiocyanate, rhodamine, dichlorotriazineamine luciferin, dansyl chloride, or phycoerythrin; examples of luminescent materials include luminol; examples of bioluminescent materials include luciferase, luciferin, and jellyfish luminescent protein; examples of suitable radioactive substances include 125I, 131I, 111In, or 99mTc.
检测趋化因子受体或CCR8的表达通常涉及将生物样品(个体的肿瘤、细胞、组织或体液)与根据本发明的一种或多种抗体或片段(任选地缀合至可检测部分)接触,并且检测样品是否对趋化因子受体或CCR8呈阳性,或者与对照样品相比样品是否改变了(例如,减少或增加)表达。Detecting the expression of chemokine receptor or CCR8 typically involves contacting a biological sample (an individual's tumor, cells, tissue, or body fluid) with one or more antibodies or fragments according to the invention (optionally conjugated to a detectable portion) and detecting whether the sample is positive for chemokine receptor or CCR8, or whether the expression of the sample has changed (e.g., decreased or increased) compared to a control sample.
方面20-药物组合物Aspect 20 - Pharmaceutical Composition
根据第20方面,提供了包含根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段的药物组合物,或根据第19方面的缀合物。优选地,药物组合物包含治疗有效量的根据本文所述的任何一种实施方式的抗体或其片段或缀合物,或其组合,以及药学上可接受的载体、赋形剂或稳定剂。According to aspect 20, a pharmaceutical composition comprising an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, is provided. Preferably, the pharmaceutical composition comprises a therapeutically effective amount of an antibody or a fragment or conjugate thereof, or a combination thereof, according to any of the embodiments described herein, and a pharmaceutically acceptable carrier, excipient, or stabilizer.
药物组合物可以通过将具有所需纯度的抗体、片段或缀合物与任选的生理上可接受的载体、赋形剂或稳定剂混合来制备(Remington,Joseph Price.Remington:Thescience and practice of pharmacy.Vol.1.Lippincott Williams&Wilkins,2006)。药物组合物可以是例如冻干制剂或水溶液的形式。Pharmaceutical compositions can be prepared by mixing an antibody, fragment, or conjugate of desired purity with an optional physiologically acceptable carrier, excipient, or stabilizer (Remington, Joseph Price. Remington: The science and practice of pharmacy. Vol. 1. Lippincott Williams & Wilkins, 2006). Pharmaceutical compositions can be in the form of, for example, lyophilized formulations or aqueous solutions.
载体、赋形剂、稳定剂Carrier, excipient, stabilizer
可接受的载体、赋形剂或稳定剂在使用的剂量和浓度下对接受者无毒,包括缓冲液,例如磷酸盐缓冲液(例如PBS)、柠檬酸盐缓冲液和其他有机酸缓冲液;抗氧化剂,包括抗坏血酸和甲硫氨酸;防腐剂(例如十八烷基二甲基苄基氯化铵;六甲氯铵;苯扎氯铵、苄索氯铵;苯酚、丁醇或苯甲醇;对羟基苯甲酸烷基酯,例如对羟基苯甲酸甲酯或丙基苯甲酸酯;儿茶酚;间苯二酚;环己醇;3-戊醇;和间甲酚);低分子量(例如少于约10个残基)多肽;蛋白质,如血清白蛋白、明胶或免疫球蛋白;聚乙烯吡咯烷酮等亲水性高分子;甘氨酸、谷氨酰胺、天冬酰胺、组氨酸、精氨酸或赖氨酸等氨基酸;单糖、双糖和其他碳水化合物,包括葡萄糖、甘露糖或糊精;EDTA等螯合剂;蔗糖、甘露糖醇、海藻糖或山梨糖醇等糖;成盐抗衡离子,例如钠;金属配合物(例如,锌-蛋白质配合物);和/或非离子表面活性剂,例如或聚乙二醇(PEG)。Acceptable carriers, excipients, or stabilizers are non-toxic to recipients at the doses and concentrations used, including buffers such as phosphate-buffered saline (e.g., PBS), citrate buffer, and other organic acid buffers; antioxidants, including ascorbic acid and methionine; preservatives (e.g., octadecyl dimethyl benzyl ammonium chloride; hexamethyl chloride; benzalkonium chloride, benzyl chloride; phenol, butanol, or benzyl alcohol; alkyl esters of p-hydroxybenzoate, such as methylparaben or propylparaben; catechol; resorcinol; cyclohexanol; 3-pentanol; and m-cresol); low molecular weight ( Examples of examples include polypeptides (less than about 10 residues); proteins such as serum albumin, gelatin, or immunoglobulins; hydrophilic polymers such as polyvinylpyrrolidone; amino acids such as glycine, glutamine, asparagine, histidine, arginine, or lysine; monosaccharides, disaccharides, and other carbohydrates, including glucose, mannose, or dextrin; chelating agents such as EDTA; sugars such as sucrose, mannitol, trehalose, or sorbitol; salt-forming counterions such as sodium; metal complexes (e.g., zinc-protein complexes); and/or nonionic surfactants such as polyethylene glycol (PEG).
多种治疗活性化合物Multiple therapeutically active compounds
根据本发明,药物组合物可以包含多于一种活性化合物,例如对于正在治疗的特定适应症是必要的或有益的。According to the present invention, a pharmaceutical composition may contain more than one active compound, for example, which is necessary or beneficial for a specific indication being treated.
根据第20方面的一些第一实施方式,药物组合物包含一种或多种另外的治疗活性化合物。According to some first embodiments of aspect 20, the pharmaceutical composition comprises one or more additional therapeutically active compounds.
在第20方面的第一实施方式的一些优选实施方式中,药物组合物包含根据第6、7、8、9、10、11、12、13、14、15、16、17和/或第18方面的抗体或抗原结合片段,或根据第19方面的缀合物,和In some preferred embodiments of the first embodiment of aspect 20, the pharmaceutical composition comprises an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or aspect 18, or a conjugate according to aspect 19, and
a)针对检查点蛋白的抗体或小分子,例如PD1、PD-L1或CTLA-4,和/或a) Antibodies or small molecules targeting checkpoint proteins, such as PD1, PD-L1, or CTLA-4, and/or
b)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,和/或者b) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1, and/or
c)靶向肿瘤细胞特异性表达的蛋白的抗体和/或c) Antibodies and/or proteins specifically expressed by tumor cells.
d)靶向HER2和/或EGFR的抗体或小分子,和/或d) Antibodies or small molecules targeting HER2 and/or EGFR, and/or
e)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,和/或e) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer, and/or
f)化疗剂,优选地紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂、紫杉醇或吉西他滨,和/或f) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, paclitaxel or gemcitabine, and/or
g)靶向激酶抑制剂,例如索拉非尼、瑞戈非尼或MEKi-1。g) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1.
与检查点抑制剂组合Combined with checkpoint inhibitors
根据第20方面的第一实施方式地优选实施方式A,所述药物组合物还包括靶向PD1、PD-L1或CTLA-4等检查点蛋白的抗体或小分子。合适的检查点靶向抗体包括Nivolumab(PD1;人IgG4)、Pembrolizumab(PD1;人源化IgG4)、Atezolizumab(PD-L1;人源化IgG1)、Avelumab(PD-L1;人IgG1)、Durvalumab(PD-L1;人IgG1)、Cemiplimab、cemiplimab-rwlc(PD-1;人mAb)、Dostarlimab(TSR-042)(PD-1;人源化IgG4)或Ipilimumab(CTLA-4;人IgG1)。According to a preferred embodiment A of the first embodiment of aspect 20, the pharmaceutical composition further includes an antibody or small molecule targeting checkpoint proteins such as PD1, PD-L1, or CTLA-4. Suitable checkpoint-targeting antibodies include Nivolumab (PD1; human IgG4), Pembrolizumab (PD1; humanized IgG4), Atezolizumab (PD-L1; humanized IgG1), Avelumab (PD-L1; human IgG1), Durvalumab (PD-L1; human IgG1), Cemiplimab, cemiplimab-rwlc (PD-1; human mAb), Dostarlimab (TSR-042) (PD-1; humanized IgG4), or Ipilimumab (CTLA-4; human IgG1).
在一些实施方式中,靶向检查点蛋白的抗体或小分子靶向CTLA-4,PDL1,PDL2,PD1,B7-H3,B7-H4,BTLA,HVEM,TIM3,GAL9,LAG3,VISTA,KIR,2B4,CD160,CGEN-15049,CHK1,CHK2,A2aR,B-7家族配体或其组合。In some implementations, antibodies or small molecules targeting checkpoint proteins target CTLA-4, PDL1, PDL2, PD1, B7-H3, B7-H4, BTLA, HVEM, TIM3, GAL9, LAG3, VISTA, KIR, 2B4, CD160, CGEN-15049, CHK1, CHK2, A2aR, B-7 family ligands, or combinations thereof.
与趋化因子受体抗体组合Combination with chemokine receptor antibodies
根据第20方面的第一实施方式的一些优选的实施方式B,药物组合物还包含靶向另外的趋化因子受体的抗体或小分子,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1。靶向另外的趋化因子受体的合适抗体包括根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面提供的抗体,或Mogamulizumab。According to some preferred embodiments B of the first embodiment of aspect 20, the pharmaceutical composition further comprises an antibody or small molecule targeting additional chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1. Suitable antibodies targeting additional chemokine receptors include antibodies provided according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, and/or 18, or Mogamulizumab.
与HER2或EGFR靶向抗体或分子的组合Combination with HER2 or EGFR-targeting antibodies or molecules
根据第20方面的第一实施方式的一些优选的实施方式C,所述药物组合物还包含靶向HER2和/或EGFR的抗体或小分子。靶向HER2的合适抗体是Trastuzumab(HER2;人源化IgG1),Pertuzumab(HER2;人源化IgG1),Ado-trastuzumab emtansine(HER2;人源化IgG1;ADC),[fam-]trastuzumab deruxtecan,fam-trastuzumab deruxtecan-nxki(HER2;人源化IgG1ADC),Sacituzumab govitecan;sacituzumab govitecan-hziy(TROP-2;人源化IgG1ADC)和/或Margetuximab(HER2;嵌合IgG1).合适的靶向EGFR的抗体是Cetuximab(EGFR;嵌合IgG1),Panitumumab(EGFR;人IgG2),和Necitumumab(EGFR;人IgG1)。According to some preferred embodiments C of the first embodiment of aspect 20, the pharmaceutical composition further comprises an antibody or small molecule targeting HER2 and/or EGFR. Suitable antibodies targeting HER2 are Trastuzumab (HER2; humanized IgG1), Pertuzumab (HER2; humanized IgG1), Ado-trastuzumab emtansine (HER2; humanized IgG1; ADC), [fam-]trastuzumab deruxtecan, fam-trastuzumab deruxtecan-nxki (HER2; humanized IgG1 ADC), Sacituzumab govitecan; sacituzumab govitecan-hziy (TROP-2; humanized IgG1 ADC) and/or Margetuximab (HER2; chimeric IgG1). Suitable antibodies targeting EGFR are Cetuximab (EGFR; chimeric IgG1), Panitumumab (EGFR; human IgG2), and Necitumumab (EGFR; human IgG1).
与治疗性抗体的组合Combination with therapeutic antibodies
根据第20方面的第一实施方式的一些实施方式D,药物组合物包含选自以下的另外的治疗性抗体:Muromonab-CD3(CD3;鼠IgG2a),Efalizumab(CD11a;人源化IgG1),Tositumomab-I131(CD20;鼠IgG2a),Nebacumab(Endotoxin;人IgM),Edrecolomab(EpCAM;鼠IgG2a),Catumaxomab(EPCAM/CD3;大鼠/小鼠双特异性mAb),Daclizumab(IL-2R;人源化IgG1),Abciximab(GPIIb/IIIa;嵌合IgG1Fab),Rituximab(CD20;嵌合IgG1),Basiliximab(IL-2R;嵌合IgG1),Palivizumab(RSV;人源化IgG1),Infliximab(TNF;嵌合IgG1),Trastuzumab(HER2;人源化IgG1),Adalimumab(TNF;人IgG1),Ibritumomab tiuxetan(CD20;鼠IgG1),Omalizumab(IgE;人源化IgG1),Cetuximab(EGFR;嵌合IgGl),Bevacizumab(VEGF;人源化IgG1),Natalizumab(a4 integrin;人源化IgG4),Panitumumab(EGFR;人IgG2),Ranibizumab(VEGF;人源化IgG1 Fab),Eculizumab(C5;人源化IgG2/4),Certolizumab pegol(TNF;人源化Fab,聚乙二醇化),Ustekinumab(IL-12/23;人IgG1),Canakinumab(IL-1β;人IgG1),Golimumab(TNF;人IgG1),Ofatumumab(CD20;人IgG1),Tocilizumab(IL-6R;人源化IgG1),Denosumab(RANK-L;人IgG2),Belimumab(BLyS;人IgG1),Ipilimumab(CTLA-4;人IgG1),Brentuximab vedotin(CD30;嵌合IgG1;ADC),Pertuzumab(HER2;人源化IgG1),Ado-trastuzumab emtansine(HER2;人源化IgG1;ADC),Raxibacumab(B.anthrasis PA;人IgG1),Obinutuzumab(CD20;人源化IgG1G1ycoengineered),Siltuximab(IL-6;嵌合IgG1),Ramucirumab(VEGFR2;人IgG1),Vedolizumab(α4β7 integrin;人源化IgG1),Nivolumab(PD1;人IgG4),Pembrolizumab(PD1;人源化IgG4),Blinatumomab(CD19,CD3;鼠双特异性串联scFv),Alemtuzumab(CD52;人源化IgG1),Evolocumab(PCSK9;人IgG2),Idarucizumab(Dabigatran;人源化Fab),Necitumumab(EGFR;人IgG1),Dinutuximab(GD2;嵌合IgG1),Secukinumab(IL-17a;人IgG1),Mepolizumab(IL-5;人源化IgG1),Alirocumab(PCSK9;人IgG1),Daratumumab(CD38;人IgG1),Elotuzumab(SLAMF7;人源化IgG1),Ixekizumab(IL-17a;人源化IgG4),Reslizumab(IL-5;人源化IgG4),Olaratumab(PDGFRα;人IgG1),Bezlotoxumab(艰难梭菌肠毒素B;人IgG1),Ateaolizumab(PD-L1;人源化IgG1),Obiltoxaximab(B.anthrasis PA;嵌合IgG1),Brodalumab(IL-17R;人IgG2),Dupilumab(IL-4Rα;人IgG4),Inotuzumabozogamicin(CD22;人源化IgG4;ADC),Guselkumab(IL-23p19;人IgG1),Sarilumab(IL-6R;人IgG1),Avelumab(PD-L1;人IgG1),Emicizumab(Factor Ixa,X;人源化IgG4,bispecific),Ocrelizumab(CD20;人源化IgG1),Benralizumab(IL-5Rα;人源化IgG1),Durvalumab(PD-L1;人IgG1),Gemtuzumab ozogamicin(CD33;人源化IgG4;ADC),Erenumab,erenumab-aooe(CGRP receptor;人IgG2),Galcanezumab,galcanezumab-gnlm(CGRP;人源化IgG4),Burosumab,burosumab-twza(FGF23;人IgG1),Lanadelumab,lanadelumab-flyo(Plasma kallikrelin;人IgG1),Mogamulizumab,mogamulizumab-kpkc(CCR4;人源化IgG1),Tildrakizumab;tildrakizumab-asmn(IL-23p19;人源化IgG1),Fremanezumab,fremanezumab-vfrm(CGRP;人源化IgG2),Ravulizumab,ravulizumab-cwvz(C5;人源化IgG2/4),Cemiplimab,cemiplimab-rwlc(PD-1;人mAb),Ibalizumab,ibalizumab-uiyk(CD4;人源化IgG4),Emapalumab,emapalumab-lzsg(IFNg;人IgG1),Moxetumomabpasudotox,moxetumomab pasudotox-tdfk(CD22;鼠IgG1 dsFv免疫毒素),Caplacizumab,caplacizumab-yhdp(von Willebrand因子;人源化纳米抗体),Risankizumab,risankizumab-rzaa(IL-23p19;人源化IgG1),Polatuzumab vedotin,polatuzumabvedotin-piiq(CD79b;人源化IgG1ADC),Romosozumab,romosozumab-aqqg(Sclerostin;人源化IgG2),Brolucizumab,brolucizumab-dbll(VEGF-A;人源化scFv),Crizanlizumab;crizanlizumab-tmca(CD62(aka P-selectin);人源化IgG2),Enfortumab vedotin,enfortumab vedotin-ejfv(Nectin-4;人IgG1ADC),[fam-]trastuzumab deruxtecan,fam-trastuzumab deruxtecan-nxki(HER2;人源化IgG1ADC),Teprotumumab,teprotumumab-trbw(IGF-1R;人IgG1),Eptinezumab,eptinezumab-jjmr(CGRP;人源化IgG1),Isatuximab,isatuximab-irfc(CD38;嵌合IgG1),Sacituzumab govitecan;sacituzumab govitecan-hziy(TROP-2;人源化IgG1 ADC),Inebilizumab(CD19;人源化IgG1),Leronlimab(CCR5;人源化IgG4),Satralizumab(IL-6R;人源化IgG2),Narsoplimab(MASP-2,人IgG4),Tafasitamab(CD19;人源化IgG1),REGNEB3(Ebola病毒;mixture of 3个人IgG1的混合),Naxitamab(GD2;人源化IgG1),Oportuzumab monatox(EpCAM;人源化scFv免疫毒素),Belantamab mafodotin(B-cell成熟抗原;人源化IgG1 ADC),Margetuximab(HER2;嵌合IgG1),Tanezumab(神经生长因子;人源化IgG2),Dostarlimab(TSR-042)(PD-1;人源化IgG4),Teplizumab(CD3;人源化IgG1),Aducanumab(β淀粉样蛋白;人IgG1),Sutimlimab(BIVV009)(C1s;人源化IgG4),Evinacumab(血管生成素样3;人IgG4)。According to some embodiments D of the first embodiment of aspect 20, the pharmaceutical composition comprises an additional therapeutic antibody selected from the following: Muromonab-CD3 (CD3; mouse IgG2a), Efalizumab (CD11a; humanized IgG1), Tositumomab-I131 (CD20; mouse IgG2a), Nebacumab (Endotoxin; human IgM), Edrecolomab (EpCAM; mouse IgG2a), Catumaxomab (EPCAM/CD3; rat/mouse bispecific mAb), Daclizumab (IL- 2R (humanized IgG1), Abciximab (GPIIb/IIIa (chimeric IgG1Fab), Rituximab (CD20 (chimeric IgG1)), Basiliximab (IL-2R (chimeric IgG1)), Palivizumab (RSV (humanized IgG1)), Infliximab (TNF (chimeric IgG1)), Trastuzumab (HER2 (humanized IgG1)), Adalimumab (TNF (human IgG1)), Ibritumomab tiuxetan (CD20 (mouse IgG1)), Omalizu mab (IgE; humanized IgG1), Cetuximab (EGFR; chimeric IgG1), Bevacizumab (VEGF; humanized IgG1), Natalizumab (α4 integrin; humanized IgG4), Panitumumab (EGFR; human IgG2), Ranibizumab (VEGF; humanized IgG1 Fab), Eculizumab (C5; humanized IgG2/4), Certolizumab pegol (TNF; humanized Fab, PEGylated), Ustekinumab (IgE; humanized IgG1), Cetuxima ... L-12/23 (human IgG1), Canakinumab (IL-1β; human IgG1), Golimumab (TNF; human IgG1), Ofatumumab (CD20; human IgG1), Tocilizumab (IL-6R; humanized IgG1), Denosumab (RANK-L; human IgG2), Belimumab (BLyS; human IgG1), Ipilimumab (CTLA-4; human IgG1), Brentuximab vedotin (CD30; chimeric IgG1; ADC), Pertuzumab (HER2; humanized IgG1), Ado-trastuzumab emtansine (HER2; humanized IgG1; ADC), Raxibacumab (B. anthrasis PA; human IgG1), Obinutuzumab (CD20; humanized IgG1 γ-coengineered), Siltuximab (IL-6; chimeric IgG1), Ramucirumab (VEGFR2; human IgG1), Vedolizumab (α4β7 integrin; humanized IgG1), Nivoluma b (PD1; human IgG4), Pembrolizumab (PD1; humanized IgG4), Blinatumomab (CD19, CD3; mouse bispecific tandem scFv), Alemtuzumab (CD52; humanized IgG1), Evolocumab (PCSK9; human IgG2), Idarucizumab (Dabigatran; humanized Fab), Necitumumab (EGFR; human IgG1), Dinutuximab (GD2; chimeric IgG1), Secukinumab (IL-17a; human IgG1) Mepolizumab (IL-5; humanized IgG1), Alirocumab (PCSK9; human IgG1), Daratumumab (CD38; human IgG1), Elotuzumab (SLAMF7; humanized IgG1), Ixekizumab (IL-17a; humanized IgG4), Reslizumab (IL-5; humanized IgG4), Olaratumab (PDGFRα; human IgG1), Bezlotoxumab (Clostridium difficile enterotoxin B; human IgG1), Ateaolizumab (PD-L1; human humanized IgG1), Obiltoxaximab (B.anthrasis PA; chimeric IgG1), Brodalumab (IL-17R; human IgG2), Dupilumab (IL-4Rα; human IgG4), Inotuzumabozogamicin (CD22; humanized IgG4; ADC), Guselkumab (IL-23p19; human IgG1), Sarilumab (IL-6R; human IgG1), Avelumab (PD-L1; human IgG1), Emicizumab (Factor Ixa, X; Humanized IgG4 (bispecific), Ocrelizumab (CD20; humanized IgG1), Benralizumab (IL-5Rα; humanized IgG1), Durvalumab (PD-L1; human IgG1), Gemtuzumab ozogamicin (CD33; humanized IgG4; ADC), Erenumab, erenumab-aooe (CGRP receptor; human IgG2), Galcanezumab, galcanezumab-gnlm (CGRP; humanized IgG4), Burosumab, burosumab-twza (FGF23; human IgG1), lanadelumab, lanadelumab-flyo (Plasma kallikrelin; human IgG1), mogamulizumab, mogamul izumab-kpkc (CCR4; humanized IgG1), Tildrakizumab; tildrakizumab-asmn (IL-23p19; humanized IgG1), Fremanezumab, fremanezumab-vfrm (CGRP; human Humanized IgG2), Ravulizumab, ravulizumab-cwvz (C5; humanized IgG2/4), Cemiplimab, cemiiplimab-rwlc (PD-1; human mAb), Ibalizumab, ibalizumab-uiyk (CD4; humanized IgG4), Emapalumab, emapalumab-lzsg (IFNg; human IgG1), Moxetumomabpasudotox, moxetumomab pasudotox-tdfk (CD22; mouse IgG1 dsF) V immunotoxin), Caplacizumab, caplacizumab-yhdp (von Willebrand factor; humanized nanobody), Risankizumab, risankizumab-rzaa (IL-23p19; humanized IgG1), Polatuzumab vedotin, polatuzumab vedotin-piiq (CD79b; humanized IgG1 ADC), Romosozumab, romosozumab-aqqg (Sclerostin; humanized IgG2), Brolu cizumab, brolucizumab-dbll (VEGF-A; humanized scFv), crizanlizumab; crizanlizumab-tmca (CD62 (aka P-selectin); humanized IgG2), Enfortuma b vedotin, enfortumab vedotin-ejfv (Nectin-4; human IgG1ADC), [fam-]trastuzumab deruxtecan, fam-trastuzumab deruxtecan-nxki ( HER2 (humanized IgG1 ADC), Teprotumumab, teprotumumab-trbw (IGF-1R; human IgG1), Eptinezumab, eptinezumab-jjmr (CGRP; humanized IgG1), Isatuximab, isatuximab-irfc (CD38; chimeric IgG1), Sacituzumab govitecan; sacituzumab govitecan-hziy (TROP-2; humanized IgG1 ADC), Inebilizumab (CD38; chimeric IgG1), 19; humanized IgG1), Leronlimab (CCR5; humanized IgG4), Satralizumab (IL-6R; humanized IgG2), Narsoplimab (MASP-2, human IgG4), Tafasitamab (CD19; humanized IgG1), REGNEB3 (Ebola virus; mixture of 3 human IgG1s), Naxitamab (GD2; humanized IgG1), Oportuzumab monatox (EpCAM; humanized scFv immunotoxin), Belantambab Mafodotin (B-cell maturation antigen; humanized IgG1 ADC), Margetuximab (HER2; chimeric IgG1), Tanezumab (nerve growth factor; humanized IgG2), Dostarlimab (TSR-042) (PD-1; humanized IgG4), Teplizumab (CD3; humanized IgG1), Aducanumab (β-amyloid protein; human IgG1), Sutimlimab (BIVV009) (C1s; humanized IgG4), Evinacumab (angiopoietin-like 3; human IgG4).
与细胞毒性剂或细胞生长抑制剂的组合Combination with cytotoxic agents or cell growth inhibitors
根据第20方面的第一实施方式的一些实施方式E,药物组合物还包含选自以下的细胞生长抑制剂和/或细胞毒性剂:放射性核素、烷化剂、DNA交联剂、DNA嵌入剂(例如,沟结合剂如小沟结合剂)、细胞周期调节剂、细胞凋亡调节剂、激酶抑制剂、蛋白质合成抑制剂、线粒体抑制剂、核输出抑制剂、拓扑异构酶I抑制剂、拓扑异构酶II抑制剂、RNA/DNA抗代谢物和抗有丝分裂剂,如第19方面的第二实施方式所述。According to some embodiments E of the first embodiment of aspect 20, the pharmaceutical composition further comprises a cell growth inhibitor and/or cytotoxic agent selected from the following: radionuclides, alkylating agents, DNA cross-linking agents, DNA intercalating agents (e.g., groove binding agents such as minor groove binding agents), cell cycle regulators, apoptosis regulators, kinase inhibitors, protein synthesis inhibitors, mitochondrial inhibitors, nuclear export inhibitors, topoisomerase I inhibitors, topoisomerase II inhibitors, RNA/DNA antimetabolites, and antimitotic agents, as described in the second embodiment of aspect 19.
在一些优选的实施方式中,细胞毒性剂是auristatin、美登木素生物碱、驱动蛋白-纺锤体蛋白(KSP)抑制剂、烟酰胺磷酸核糖基转移酶(NAMPT)抑制剂或吡咯并苯二氮衍生物。In some preferred embodiments, the cytotoxic agent is auristatin, maytansine alkaloid, kinin-spindle protein (KSP) inhibitor, nicotinamide phosphoribosyltransferase (NAMPT) inhibitor, or pyrrolobenzodiazepine derivative.
方面21-药物用途/治疗方法Section 21 - Drug Uses/Treatment Methods
根据第21方面,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面的缀合物或根据第20方面的药物组合物用作药物。According to aspect 21, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is provided for use as a medicine.
此外,提供了提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面的缀合物或根据第20方面的药物组合物用于制备药物的用途,例如用于治疗涉及表达趋化因子受体特别是CCR8的细胞的肿瘤或疾病。In addition, the use of antibodies or antigen-binding fragments provided according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or conjugates according to aspect 19, or pharmaceutical compositions according to aspect 20, for the preparation of a medicament, for example, for the treatment of tumors or diseases involving cells expressing chemokine receptors, particularly CCR8.
此外,提供了一种治疗疾病的方法,所述方法包括施用有效剂量的根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段、或根据第19方面的缀合物或根据第20方面的药物组合物给有需要的患者。In addition, a method for treating a disease is provided, the method comprising administering an effective dose of an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, to a patient in need.
对于治疗应用,可以将根据本发明的抗体或抗原结合片段或缀合物或药物组合物施用于患者或受试者,例如以药学上可接受的剂型向人类或非人类受试者施用。例如,可以通过肌肉内、腹膜内、脑脊髓内、皮下、关节内、滑膜内、鞘内、口服、局部或吸入途径以大丸剂形式静脉内给药或通过在一段时间内连续输注。根据本发明的抗体、片段、缀合物和药物组合物特别适合通过瘤内、瘤周、病灶内或病灶周围途径施用,以发挥局部和全身治疗效果。For therapeutic applications, the antibodies or antigen-binding fragments or conjugates or pharmaceutical compositions according to the invention can be administered to patients or subjects, for example, to human or non-human subjects in pharmaceutically acceptable dosage forms. For example, they can be administered intravenously in pellet form or by continuous infusion over a period of time via intramuscular, intraperitoneal, intraspinal, subcutaneous, intra-articular, intrasynovial, intrathecal, oral, local, or inhalation routes. The antibodies, fragments, conjugates, and pharmaceutical compositions according to the invention are particularly suitable for administration via intratumoral, peritumoral, intralesional, or perilesional routes to achieve local and systemic therapeutic effects.
可能的施用途径包括肠胃外(例如,肌肉内、静脉内、动脉内、腹膜内或皮下)、肺内和鼻内。此外,抗体、片段、缀合物和药物组合物可以通过脉冲输注施用,例如抗体、片段或缀合物的剂量递减。优选地,通过注射给药,最优选地静脉内或皮下注射,这部分取决于施用是短暂的还是长期的。施用的量可能取决于多种因素,例如患者或受试者的临床症状、体重,以及是否施用其他药物。本领域技术人员将认识到施用途径将根据待治疗的病症或疾病而变化。Possible routes of administration include parenteral (e.g., intramuscular, intravenous, intraarterial, intraperitoneal, or subcutaneous), intrapulmonary, and intranasal. Furthermore, antibodies, fragments, conjugates, and pharmaceutical compositions can be administered via pulsatile infusion, such as dose-decrease administration of antibodies, fragments, or conjugates. Preferably, administration is by injection, most preferably intravenous or subcutaneous, depending in part on whether the administration is short-term or long-term. The amount administered may depend on a variety of factors, such as the patient's or subject's clinical symptoms, weight, and whether other medications are being administered. Those skilled in the art will recognize that the route of administration will vary depending on the condition or disease to be treated.
抗体的给药频率范围从每3-6个月一次到每周、每两周(BIW)或每天给药一次。同样地,剂量水平范围从低mg固定剂量(每天、每周、每两周或每月,取决于抗体)到大约1g剂量。给药频率取决于多种因素,包括靶标的浓度和周转率、靶标的生物分布、抗体、片段或缀合物的半衰期以及可能增强抗体、片段、缀合物生物学效应的潜在药效学效应和超出其在药理学相关水平的存在的药物组合物。Antibody dosing frequencies range from once every 3–6 months to once weekly, once every two weeks (BIW), or daily. Similarly, dose levels range from low fixed mg doses (daily, weekly, once every two weeks, or monthly, depending on the antibody) to approximately 1 g doses. Dosing frequency depends on a variety of factors, including target concentration and turnover, target biodistribution, the half-life of the antibody, fragment, or conjugate, and potential pharmacodynamic effects that may enhance the biological effects of the antibody, fragment, or conjugate, and pharmaceutical compositions present beyond their pharmacologically relevant levels.
在一些实施方式中,抗CCR8抗体以1mg/kg的剂量施用,例如每日、每周、q2w、q3w或q4w。在一些实施方式中,抗CCR8抗体的施用剂量为1至30mg/kg,优选地5至10mg/kg,例如每日、每周、q2w、q3w或q4w。在一些实施方式中,抗CCR8抗体的施用剂量为4至8mg/kg,优选地5至6mg/kg,例如每日、每周、q2w、q3w或q4w。In some embodiments, the anti-CCR8 antibody is administered at a dose of 1 mg/kg, for example, daily, weekly, q2w, q3w, or q4w. In some embodiments, the dose of the anti-CCR8 antibody is 1 to 30 mg/kg, preferably 5 to 10 mg/kg, for example, daily, weekly, q2w, q3w, or q4w. In some embodiments, the dose of the anti-CCR8 antibody is 4 to 8 mg/kg, preferably 5 to 6 mg/kg, for example, daily, weekly, q2w, q3w, or q4w.
为了预防或治疗疾病,抗体的合适剂量将取决于待治疗疾病的类型、疾病的严重程度和病程、抗体是出于预防目的还是治疗目的而施用、既往治疗、受试者的临床病史和对抗体变体的反应,以及主治医师或健康兽医专业人员的判断。一次或在一系列治疗中适当地向受试者施用抗体。The appropriate dosage of an antibody for prevention or treatment will depend on the type, severity, and course of the disease, whether the antibody is administered for prevention or treatment, prior treatment, the subject's clinical history and response to antibody variants, and the judgment of the attending physician or healthy veterinary professional. The antibody may be administered to the subject once or as part of a series of treatments.
如实施例12.4.2所示,令人惊奇地观察到,即使是单剂量也可能足以建立显著的治疗反应。根据本发明,因此提供了用于治疗肿瘤的诱导ADCC和/或ADCP的抗CCR8抗体,由此仅向受试者施用单剂量的抗CCR8抗体,使得没有向受试者施用更多剂量的相同或不同的抗CCR8抗体。这种方法不仅在逻辑上优越并且对患者特别方便,而且还避免了患者依从性问题。As illustrated in Example 12.4.2, it was surprisingly observed that even a single dose could be sufficient to establish a significant therapeutic response. According to the invention, an anti-CCR8 antibody for treating tumors that induces ADCC and/or ADCP is thus provided, whereby only a single dose of the anti-CCR8 antibody is administered to the subject, eliminating the need to administer further doses of the same or different anti-CCR8 antibody to the subject. This approach is not only logically superior and particularly convenient for patients, but also avoids patient compliance issues.
当静脉内施用时,包含抗体、片段或缀合物的药物组合物可以通过输注施用约0.5至约5小时的时间。在一些实施方式中,输注可能会持续约0.5至约2.5小时、约0.5至约2.0小时、约0.5至约1.5小时或约1.5小时,这取决于根据所施用的抗体、片段、缀合物和药物组合物以及所施用的抗体、片段或缀合物的量。When administered intravenously, a pharmaceutical composition comprising an antibody, fragment, or conjugate can be administered by infusion over a period of about 0.5 to about 5 hours. In some embodiments, the infusion may last for about 0.5 to about 2.5 hours, about 0.5 to about 2.0 hours, about 0.5 to about 1.5 hours, or about 1.5 hours, depending on the antibody, fragment, conjugate, and pharmaceutical composition administered, and the amount of the antibody, fragment, or conjugate administered.
方面22-二次医药用途/治疗方法Aspect 22 - Secondary Medical Uses/Treatment Methods
用根据本发明的抗CCR8抗体治疗在各种同基因肿瘤模型中显示出显著的功效。在一些情况下,将有效剂量的抗体或抗原结合片段施用于一组患病受试者导致Treatment with the anti-CCR8 antibody according to the invention has shown significant efficacy in various syngeneic tumor models. In some cases, administration of an effective dose of the antibody or antigen-binding fragment to a group of diseased subjects resulted in
a.至少15%、20%或25%的受试者有完全响应,和/或a. At least 15%, 20%, or 25% of the subjects had a complete response, and/or
b.至少40%、50%、60%或70%的受试者的总体响应率。b. Overall response rate of at least 40%, 50%, 60%, or 70% of the subjects.
根据第22方面,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面的缀合物或根据第20方面的药物组合物用于治疗以趋化因子受体阳性细胞为特征的肿瘤或疾病,优选CCR8阳性细胞,例如CCR8阳性调节性T细胞。治疗可以如方面21所讨论的那样发生。According to aspect 22, antibodies or antigen-binding fragments according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or conjugates according to aspect 19, or pharmaceutical compositions according to aspect 20, are provided for treating tumors or diseases characterized by chemokine receptor-positive cells, preferably CCR8-positive cells, such as CCR8-positive regulatory T cells. Treatment may occur as discussed in aspect 21.
优选地,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面的缀合物或根据第20方面的药物组合物用于治疗肿瘤或疾病,其特征在于涉及表达靶向的七次跨膜受体或趋化因子受体的细胞。Preferably, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is provided for treating a tumor or disease, characterized in that it involves cells expressing a targeted seven-transmembrane receptor or chemokine receptor.
对于根据本发明的抗体、抗原结合片段或缀合物,可以设想多种作用模式。一种作用模式是将本发明的抗趋化因子受体抗体与药物偶联成为抗体药物缀合物(ADC)形式。另一种作用方式是抗体靶向趋化因子受体诱导ADCC的能力。第三种作用模式在于抗体靶向趋化因子受体诱导ADCP的能力。For the antibodies, antigen-binding fragments, or conjugates according to the present invention, various modes of action are conceivable. One mode of action is to conjugate the anti-chemokine receptor antibody of the present invention with a drug to form an antibody-drug conjugate (ADC). Another mode of action is the ability of the antibody to target the chemokine receptor and induce ADCC. A third mode of action lies in the ability of the antibody to target the chemokine receptor and induce ADCP.
特定的根据第8、第11、第12、第13和第14方面的特定CCR8抗体或抗原结合片段特别适用于基于ADCC/ADCP的方法,例如因为它们的特点是内化特别低或者是非内化抗体,因此驻留在表达CCR8的靶细胞表面并引起它们的有效杀伤,如体外激活的人Tregs所证明的(实施例10.3.3 ff,实施例10.3.4 ff)或体内(实施例12 ff)。Specific CCR8 antibodies or antigen-binding fragments according to aspects 8, 11, 12, 13 and 14 are particularly suitable for ADCC/ADCP-based methods, for example because they are characterized as having particularly low internalization or being non-internalizing antibodies, thus residing on the surface of target cells expressing CCR8 and causing their effective killing, as demonstrated in vitro by activated human Tregs (Example 10.3.3 ff, Example 10.3.4 ff) or in vivo (Example 12 ff).
调节性T细胞(Treg)通过抑制效应T细胞(包括肿瘤微环境中的肿瘤反应性T细胞)的功能来促进肿瘤生长。事实上,Treg是阻碍免疫检查点抑制剂(ICI)在许多适应症中发挥功效的关键耐药机制之一。Regulatory T cells (Tregs) promote tumor growth by suppressing the function of effector T cells, including tumor reactive T cells in the tumor microenvironment. In fact, Tregs are one of the key resistance mechanisms that hinder the efficacy of immune checkpoint inhibitors (ICIs) in many indications.
CCR8是趋化因子受体GPCR家族的一种表面受体,主要表达在肿瘤中常见的激活免疫抑制性Treg上。与针对这些抑制性T细胞的其他方法不同,靶向CCR8提供了在不影响静息Treg或其他全身免疫细胞的情况下耗尽肿瘤内Treg的机会。因此,靶向CCR8可能在疗效和安全性方面都更胜一筹。因此,这种作用模式可用于具有肿瘤内Tregs的肿瘤,但也可用于其他以激活异常存在即CCR8表达的Tregs为特征的疾病。CCR8 is a surface receptor of the GPCR family of chemokine receptors, primarily expressed on activated immunosuppressive Tregs commonly found in tumors. Unlike other approaches targeting these suppressor T cells, targeting CCR8 offers the opportunity to deplete intratumoral Tregs without affecting resting Tregs or other systemic immune cells. Therefore, targeting CCR8 may be superior in both efficacy and safety. Consequently, this mode of action can be used for tumors with intratumoral Tregs, but also for other diseases characterized by the presence of abnormally activated Tregs, i.e., CCR8 expression.
具体适应症Specific indications
原则上,抗体、片段、缀合物和药物组合物可用于治疗涉及CCR8表达细胞的任何癌症。例如,癌症可包括表达CCR8的肿瘤细胞,例如B细胞淋巴瘤和T细胞淋巴瘤。或者,癌症可包含表达CCR8的肿瘤内Treg。如实施例11所示,CCR8在多种肿瘤适应症中上调,例如T细胞急性淋巴细胞白血病、乳腺癌、三阴性乳腺癌、三阳性乳腺癌、非小细胞肺癌(NSCLC)、小细胞肺癌癌症(SCLC)、睾丸癌、胃癌、头颈部鳞状细胞癌、胸腺瘤、食管腺癌、结直肠癌、胰腺癌、卵巢癌或宫颈癌、急性髓系白血病、肾癌、膀胱癌、皮肤癌、黑色素瘤、甲状腺癌、间皮瘤、肉瘤和前列腺癌。根据一些优选的实施方式,作为药物的用途是用于治疗头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌。In principle, antibodies, fragments, conjugates, and pharmaceutical compositions can be used to treat any cancer involving CCR8-expressing cells. For example, cancer may include tumor cells expressing CCR8, such as B-cell lymphoma and T-cell lymphoma. Alternatively, cancer may contain intratumoral Tregs expressing CCR8. As shown in Example 11, CCR8 is upregulated in a variety of cancer indications, such as T-cell acute lymphoblastic leukemia, breast cancer, triple-negative breast cancer, triple-positive breast cancer, non-small cell lung cancer (NSCLC), small cell lung cancer (SCLC), testicular cancer, gastric cancer, head and neck squamous cell carcinoma, thymoma, esophageal adenocarcinoma, colorectal cancer, pancreatic cancer, ovarian or cervical cancer, acute myeloid leukemia, kidney cancer, bladder cancer, skin cancer, melanoma, thyroid cancer, mesothelioma, sarcoma, and prostate cancer. According to some preferred embodiments, the use as a medicine is for treating head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumors, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
根据第22方面的一些第一实施方式,肿瘤选自肾上腺癌(例如肾上腺皮质癌或嗜铬细胞瘤)、膀胱癌(例如移行细胞癌、移行细胞癌-乳头状)、脑癌(例如神经胶质瘤-星形细胞瘤、神经胶质瘤-星形细胞瘤-胶质母细胞瘤、神经胶质瘤-少突星形细胞瘤、神经胶质瘤-少突胶质细胞瘤)、乳腺癌(例如ADC、ADC-导管、ADC-导管-TNBC、ADC-导管-TPBC、ADC-小叶)、结直肠癌(例如ADC)、食管癌(例如ADC)、食管癌(例如SCC)、胃癌(例如ADC、ADC-弥漫性、ADC-肠型、ADC-肠-管状)、头颈癌(例如喉癌-SCC、SCC、口腔癌-SCC)、肾癌(例如ccRCC、嫌色细胞、乳头状、乳头状I型、乳头状II型)、肝癌(例如HCC)、肺癌(例如NSCLC-ADC、NSCLC-ADC-混合型、NSCLC-SCC、SCLC),间皮瘤(例如上皮样)、卵巢癌(例如ADC-囊腺癌-浆液性乳头状癌)、胰腺癌(例如ADC导管)、前列腺癌(例如ADC-腺泡型)、肉瘤(如平滑肌肉瘤、去分化脂肪肉瘤、恶性纤维组织细胞瘤)、皮肤癌(如黑色素瘤)、睾丸癌(如生殖细胞瘤-精原细胞瘤)、胸腺瘤、甲状腺癌(如滤泡癌、乳头状癌-经典变体)或子宫癌(例如宫颈-SCC、宫颈-SCC-角化、宫颈-SCC-非角化、子宫内膜-ADC-子宫内膜样、子宫内膜-ADC-乳头状浆液性、子宫内膜-癌肉瘤-恶性苗勒管混合瘤)、B细胞淋巴瘤和T细胞淋巴瘤(参见表11.1.2)。According to some first embodiments of aspect 22, the tumor is selected from adrenal carcinoma (e.g., adrenocortical carcinoma or pheochromocytoma), bladder cancer (e.g., transitional cell carcinoma, transitional cell carcinoma-papillary), brain cancer (e.g., glioma-astrocytoma, glioma-astrocytoma-glioblastoma, glioma-oligodendroglioma, glioma-oligodendroglioma), breast cancer (e.g., ADC, ADC-duct, ADC-duct-TNBC, ADC-duct-TPBC, ADC-lobule), colorectal cancer (e.g., ADC), esophageal cancer (e.g., ADC), esophageal cancer (e.g., SCC), gastric cancer (e.g., ADC, ADC-diffuse, ADC-intestinal type, ADC-intestinal-tubular), head and neck cancer (e.g., laryngeal cancer-SCC, SCC, oral cancer-SCC), kidney cancer (e.g., ccRCC, chromophobe, papillary, papillary type I, papillary type II), liver cancer, etc. Cancers such as HCC, lung cancer (e.g., NSCLC-ADC, NSCLC-ADC-mixed, NSCLC-SCC, SCLC), mesothelioma (e.g., epithelioid), ovarian cancer (e.g., ADC-cystadenocarcinoma-serous papillary carcinoma), pancreatic cancer (e.g., ADC ductal), prostate cancer (e.g., ADC-acinoid), sarcoma (e.g., leiomyosarcoma, dedifferentiated liposarcoma, malignant fibrous histiocytoma), skin cancer (e.g., melanoma), testicular cancer (e.g., germ cell tumor-seminomatous tumor), thymoma, thyroid cancer (e.g., follicular carcinoma, papillary carcinoma-classic variant), or uterine cancer (e.g., cervical-SCC, cervical-SCC-keratotic, cervical-SCC-nonkeratotic, endometrial-ADC-endometrioid, endometrial-ADC-papillary serous, endometrial-carcinosarcoma-malignant Müllerian mixed tumor), B-cell lymphoma, and T-cell lymphoma (see Table 11.1.2).
根据第22方面的一些第二实施方式,肿瘤选自T细胞急性淋巴细胞白血病、乳腺癌、三阴性乳腺癌、三阳性乳腺癌、非小细胞肺癌(NSCLC)、小细胞肺癌(SCLC)、睾丸癌、胃癌、头颈部鳞状细胞癌、胸腺瘤、食管腺癌、结直肠癌、胰腺癌、卵巢癌或宫颈癌、急性髓性白血病、肾癌、膀胱癌、皮肤癌、皮肤癌、黑色素瘤、甲状腺癌、间皮瘤、肉瘤和前列腺癌或任何其他涉及趋化因子受体或CCR8表达细胞的癌症。优选地,肿瘤选自头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌。According to some second embodiments of aspect 22, the tumor is selected from T-cell acute lymphoblastic leukemia, breast cancer, triple-negative breast cancer, triple-positive breast cancer, non-small cell lung cancer (NSCLC), small cell lung cancer (SCLC), testicular cancer, gastric cancer, head and neck squamous cell carcinoma, thymoma, esophageal adenocarcinoma, colorectal cancer, pancreatic cancer, ovarian cancer or cervical cancer, acute myeloid leukemia, kidney cancer, bladder cancer, skin cancer, melanoma, thyroid cancer, mesothelioma, sarcoma, and prostate cancer, or any other cancer involving cells expressing chemokine receptors or CCR8. Preferably, the tumor is selected from head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumors, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
组合治疗Combination therapy
根据第22方面的一些第三实施方式,其可以并且被建议与根据第22方面的第一和/或第二实施方式组合,该用途是同时、单独或顺序地与一种或多种其他治疗活性化合物一起使用。实施例12.6、12.6.1、12.6.2、12.6.3、12.6.4、12.6.5、12.6.6、12.6.7、12.6.8和12.6.9中提供了组合治疗的实例,证明了本发明的抗CCR8抗体与一般的抗CCR8抗体组合疗法的广泛的适用性。According to some third embodiments of aspect 22, it can and is suggested to be combined with the first and/or second embodiments of aspect 22, the use being simultaneous, alone or sequentially used with one or more other therapeutically active compounds. Examples of combination therapy are provided in Examples 12.6, 12.6.1, 12.6.2, 12.6.3, 12.6.4, 12.6.5, 12.6.6, 12.6.7, 12.6.8 and 12.6.9, demonstrating the broad applicability of the anti-CCR8 antibody of the present invention in combination therapy with general anti-CCR8 antibodies.
抗趋化因子受体抗体,例如CCR8抗体或ADC可辅助或与具有抗癌特性的其他药剂或治疗一起使用。当辅助使用时,抗体、片段或缀合物和其他试剂可以一起配制在单个组合药物组合物或制剂中,如第20方面所述,或者可以优选地在单一协调的给药方案或不同的给药方案上单独配制和施用。Antichemokine receptor antibodies, such as CCR8 antibodies or ADCs, can be used adjunctive or in conjunction with other agents or treatments that have anticancer properties. When used adjunctive, antibodies, fragments or conjugates, and other agents can be formulated together in a single combination pharmaceutical composition or formulation, as described in aspect 20, or preferably formulated and administered separately on a single coordinated dosing regimen or different dosing regimens.
顺序给药:抗CCR8抗体治疗后的组合伙伴Sequential dosing: Combination partners after anti-CCR8 antibody therapy
根据本发明发现,抗CCR8抗体作为第一药剂的施用和随后一种或多种其他治疗活性化合物的施用以不可预见的方式增加了功效。According to the present invention, the administration of an anti-CCR8 antibody as a first agent and the subsequent administration of one or more other therapeutically active compounds have increased efficacy in an unpredictable manner.
根据优选的治疗方案,治疗开始于施用抗CCR8抗体(例如如上所述每天、每周、q2w、q3w或q4w),随后任选地施用一种或多种另外的治疗活性化合物。如实施例12.6ff所述,在抗CCR8抗体的初始剂量后开始施用第二治疗剂或疗法与进一步改善的功效相关。不受理论的束缚,应选择初始剂量之间的时间以允许肿瘤内Treg消耗至少30%、40%、50%或60%。一种或多种另外的治疗活性化合物或组合伴侣被建议为为此目的描述的那些中的任何一种。例如,一种或多种另外的治疗活性化合物可以包括检查点抑制剂(例如抗-PD1/抗-PD-L1/抗-CTLA4抗体)、靶向由肿瘤细胞特异性表达的蛋白质的抗体,或本文中描述的化学治疗剂。According to the preferred treatment regimen, treatment begins with the administration of an anti-CCR8 antibody (e.g., daily, weekly, q2w, q3w, or q4w as described above), followed optionally by the administration of one or more additional therapeutically active compounds. As described in Example 12.6ff, initiating administration of a second therapeutic agent or therapy after the initial dose of the anti-CCR8 antibody is associated with further improved efficacy. Without being bound by theory, the time between initial doses should be chosen to allow for at least 30%, 40%, 50%, or 60% depletion of intratumoral Tregs. One or more additional therapeutically active compounds or combination partners are suggested for any of those described for this purpose. For example, one or more additional therapeutically active compounds may include checkpoint inhibitors (e.g., anti-PD1/anti-PD-L1/anti-CTLA4 antibodies), antibodies targeting proteins specifically expressed by tumor cells, or chemotherapeutic agents described herein.
在不同的实施方式中,治疗以化疗剂的施用开始,之后是抗CCR8抗体的施用(例如每周一次或每两周一次的时间表)。In different implementations, treatment begins with the administration of chemotherapy agents, followed by the administration of anti-CCR8 antibodies (e.g., on a weekly or bi-weekly schedule).
用于组合治疗的其他治疗活性化合物Other therapeutically active compounds for combination therapy
与抗趋化因子受体抗体或ADC(例如抗CCR8抗体或ADC)辅助施用的药剂可能与抗趋化因子受体抗体或ADC具有互补活性,因此抗体/ADC和其他药物不会相互产生不利影响。可与根据本发明的抗趋化因子受体或抗CCR8抗体或ADC辅助使用的药剂可以是烷化剂、血管生成抑制剂、抗体、抗代谢剂、抗有丝分裂剂、抗增殖剂、抗病毒剂、极光激酶抑制剂、凋亡促进剂(例如,Bcl-2家族抑制剂)、死亡受体通路激活剂、Bcr-Abl激酶抑制剂、BiTE(双特异性T细胞接合剂)抗体、抗体药物缀合物、生物反应调节剂、细胞周期蛋白依赖性激酶抑制剂、细胞周期抑制剂,环氧合酶2抑制剂、DVD、白血病病毒致癌基因同系物(ErbB2)受体抑制剂、生长因子抑制剂、热休克蛋白(HSP)-90抑制剂、组蛋白脱乙酰酶(HDAC)抑制剂、激素疗法、免疫学、凋亡蛋白抑制剂(IAPs)的抑制剂、嵌入抗生素、激酶抑制剂、驱动蛋白抑制剂、Jak2抑制剂、哺乳动物雷帕霉素靶标抑制剂、microRNA、有丝分裂原激活的细胞外信号调节激酶抑制剂、多价结合蛋白、非甾体类抗炎药(NSAID)、聚ADP(二磷酸腺苷)-核糖聚合酶(PARP)抑制剂、铂化疗药物、马球样激酶(Plk)抑制剂、磷酸肌醇_3激酶(PI3K)抑制剂、蛋白酶体抑制剂、嘌呤类似物、嘧啶类似物、受体酪氨酸激酶抑制剂、维甲酸/三角肌植物生物碱、抑制性小核糖核酸(siRNA)、拓扑异构酶抑制剂、泛素连接酶抑制剂等,以及这些药剂中的一种或多种的组合。Agents used as adjunctive therapy with anti-chemokine receptor antibodies or ADCs (e.g., anti-CCR8 antibodies or ADCs) may have complementary activity to the anti-chemokine receptor antibodies or ADCs, thus the antibody/ADC and other drugs will not adversely affect each other. Agents that can be used as adjunctive therapy with the anti-chemokine receptor or anti-CCR8 antibodies or ADCs according to the present invention can be alkylating agents, angiogenesis inhibitors, antibodies, antimetabolites, antimitotics, antiproliferative agents, antiviral agents, aurora kinase inhibitors, apoptosis promoters (e.g., Bcl-2 family inhibitors), death receptor pathway activators, Bcr-Abl kinase inhibitors, BiTE (bispecific T-cell conjugate) antibodies, antibody-drug conjugates, biological response modifiers, cyclin-dependent kinase inhibitors, cell cycle inhibitors, cyclooxygenase 2 inhibitors, DVD, leukemia virus oncogene homologue (ErbB2) receptor inhibitors, growth factor inhibitors, heat shock protein (HSP)-90 inhibitors, histone deacetylase (HDAC) inhibitors, hormone therapy, immunology, etc. Inhibitors of apoptosis protein inhibitors (IAPs), embedded antibiotics, kinase inhibitors, kinase inhibitors, Jak2 inhibitors, mammalian rapamycin target inhibitors, microRNAs, mitogen-activated extracellular signal-regulated kinase inhibitors, multivalent binding proteins, nonsteroidal anti-inflammatory drugs (NSAIDs), poly(adenosine diphosphate)-ribose polymerase (PARP) inhibitors, platinum-based chemotherapy drugs, pololf-like kinase (Plk) inhibitors, phosphatidylinositol 3-kinase (PI3K) inhibitors, proteasome inhibitors, purine analogs, pyrimidine analogs, receptor tyrosine kinase inhibitors, retinoic acid/deltaic alkaloids, inhibitory small RNAs (siRNAs), topoisomerase inhibitors, ubiquitin ligase inhibitors, etc., as well as one or more combinations of these agents.
根据第22方面的第三实施方式的一些高度优选的实施方式,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面的缀合物或根据第20方面的药物组合物用于与以下同时、分开或依次组合According to some highly preferred embodiments of the third embodiment of aspect 22, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is provided for use in conjunction with, separately from, or sequentially combined with the following.
(i)一种或多种另外的治疗活性化合物,优选地选自(i) one or more other therapeutically active compounds, preferably selected from...
a)靶向检查点蛋白的抗体或小分子,例如PD1、PD-L1或CTLA-4,a) Antibodies or small molecules that target checkpoint proteins, such as PD1, PD-L1, or CTLA-4.
b)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,b) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
c)靶向肿瘤细胞特异性表达的蛋白的抗体,c) Antibodies that target proteins specifically expressed by tumor cells.
d)靶向HER2和/或EGFR的抗体或小分子,d) Antibodies or small molecules targeting HER2 and/or EGFR,
e)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,和/或e) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer, and/or
f)化疗剂,优选紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,f) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
g)靶向激酶抑制剂,例如索拉非尼、瑞戈非尼或MEKi-1,和/或g) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1, and/or
(ii)放射治疗,和或(ii) Radiation therapy, and/or
(iii)肿瘤内B细胞的耗竭,(iii) Depletion of B cells within the tumor
例如在肿瘤或疾病的治疗中,优选地以趋化因子受体阳性细胞为特征,例如CCR8阳性细胞,例如CCR8阳性调节性T细胞。For example, in the treatment of tumors or diseases, cells characterized by chemokine receptor positivity, such as CCR8 positive cells, such as CCR8 positive regulatory T cells, are preferred.
可以选择合适的紫杉烷,例如选自紫杉醇、白蛋白结合型紫杉醇、卡巴他赛或多烯紫杉醇或其衍生物。Suitable taxanes can be selected, such as those selected from paclitaxel, albumin-bound paclitaxel, cabazitaxel, or docetaxel or their derivatives.
其中抗CCR8抗体与多柔比星、紫杉烷类、顺铂或卡铂组合的实施方式,其中抗CCR8抗体与trastuzumab或pertuzumab组合的实施方式,和其中抗CCR8抗体与PD-L1抗体如atezolizumab组合的实施方式特别适用于治疗乳腺癌,如IV期乳腺癌。The embodiments in which anti-CCR8 antibodies are combined with doxorubicin, taxanes, cisplatin or carboplatin, the embodiments in which anti-CCR8 antibodies are combined with trastuzumab or pertuzumab, and the embodiments in which anti-CCR8 antibodies are combined with PD-L1 antibodies such as atezolizumab are particularly suitable for the treatment of breast cancer, such as stage IV breast cancer.
其中抗CCR8抗体与顺式/卡铂、紫杉醇、多烯紫杉醇或吉西他滨组合的实施方式,其中抗CCR8抗体与avastin、EGFR抑制剂(例如Tarceva或Iressa)、ALK抑制剂、ROS抑制剂、BRAF抑制剂或NTRK抑制剂组合的实施方式,和其中抗CCR8抗体与nivolumab、pembrolizumab或atezolizumab或其中任何一种的衍生物组合的实施方式特别适用于治疗NSCLC。The embodiments in which anti-CCR8 antibodies are combined with cis/carboplatin, paclitaxel, docetaxel or gemcitabine, the embodiments in which anti-CCR8 antibodies are combined with avastin, EGFR inhibitors (e.g. Tarceva or Iressa), ALK inhibitors, ROS inhibitors, BRAF inhibitors or NTRK inhibitors, and the embodiments in which anti-CCR8 antibodies are combined with nivolumab, pembrolizumab or atezolizumab or derivatives of any of these are particularly suitable for the treatment of NSCLC.
其中抗CCR8抗体与nivolumab、pembrolizumab或ipilimumab(CTLA4)、抗IL2抗体或任何这些的衍生物组合的实施方式,其中抗CCR8抗体与BRAF抑制剂或MEK抑制剂组合的实施方式,和其中抗-CCR8抗体联合达卡巴嗪、紫杉醇、卡铂或顺铂组合的实施方式特别适用于黑色素瘤的治疗。Embodiments in which anti-CCR8 antibodies are combined with nivolumab, pembrolizumab or ipilimumab (CTLA4), anti-IL2 antibodies or any derivatives thereof, embodiments in which anti-CCR8 antibodies are combined with BRAF inhibitors or MEK inhibitors, and embodiments in which anti-CCR8 antibodies are combined with dacarbazine, paclitaxel, carboplatin or cisplatin are particularly suitable for the treatment of melanoma.
与检查点抑制剂的组合Combination with checkpoint inhibitors
如果肿瘤对免疫检查点抑制有响应,或者如果肿瘤显示出高度或中等免疫浸润,并且如果存在大量CD8+T细胞和/或NK细胞或可以被诱导(例如除了高CCR8/FoxP3比率),则发现肿瘤对抗CCR8抗体治疗特别敏感,(参见实施例12.6ff,参见响应同基因型模型)。If the tumor responds to immune checkpoint inhibition, or if the tumor shows high or moderate immune infiltration, and if there are a large number of CD8+ T cells and/or NK cells or they can be induced (e.g., in addition to a high CCR8/FoxP3 ratio), the tumor is found to be particularly sensitive to anti-CCR8 antibody therapy (see Example 12.6ff, see Response Isotype Model).
根据第22方面的第三实施方式的一些特别优选的实施方式,所述一种或多种另外的治疗活性化合物包含靶向检查点蛋白例如PD1、PD-L1或CTLA-4的抗体或小分子。合适的检查点靶向抗体包括Nivolumab(PD1;人IgG4)、Pembrolizumab(PD1;人源化IgG4)、Atezolizumab(PD-L1;人源化IgG1)、Avelumab(PD-L1;人IgG1)、Durvalumab(PD-L1;人IgG1)、Cemiplimab、cemiplimab-rwlc(PD-1;人mAb)、Dostarlimab(TSR-042)(PD_1;人源化IgG4)或Ipilimumab(CTLA-4;人IgG1)。在一些实施方式中,靶向检查点蛋白的抗体或小分子靶向CTLA-4,PDL1,PDL2,PD1,B7-H3,B7-H4,BTLA,HVEM,TIM3,GAL9,LAG3,VISTA,KIR,2B4,CD160,CGEN-15049,CHK 1,CHK2,A2aR,B_7家族配体或其组合。实施例12.6ff显示通过将靶向检查点蛋白PD-L1的抗体与根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的本发明抗体组合获得的优异治疗效果。实施例12.6ff证明,根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的本发明抗体与靶向检查点蛋白CTLA4的抗体的组合显示在肿瘤模型中同样具有出色的疗效。According to some particularly preferred embodiments of the third embodiment of aspect 22, the one or more additional therapeutically active compounds comprise antibodies or small molecules targeting checkpoint proteins such as PD1, PD-L1, or CTLA-4. Suitable checkpoint-targeting antibodies include Nivolumab (PD1; human IgG4), Pembrolizumab (PD1; humanized IgG4), Atezolizumab (PD-L1; humanized IgG1), Avelumab (PD-L1; human IgG1), Durvalumab (PD-L1; human IgG1), Cemiplimab, cemiplimab-rwlc (PD-1; human mAb), Dostarlimab (TSR-042) (PD_1; humanized IgG4), or Ipilimumab (CTLA-4; human IgG1). In some embodiments, antibodies or small molecules targeting checkpoint proteins, specifically CTLA-4, PDL1, PDL2, PD1, B7-H3, B7-H4, BTLA, HVEM, TIM3, GAL9, LAG3, VISTA, KIR, 2B4, CD160, CGEN-15049, CHK1, CHK2, A2aR, B7 family ligands, or combinations thereof, are used. Example 12.6ff demonstrates excellent therapeutic effects obtained by combining an antibody targeting the checkpoint protein PD-L1 with the antibodies of the present invention according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18. Example 12.6ff demonstrates that combinations of the antibodies of the present invention according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18 with antibodies targeting the checkpoint protein CTLA4 also exhibit excellent efficacy in tumor models.
与趋化因子受体抗体的组合Combination with chemokine receptor antibodies
根据第22方面的第三实施方式的一些优选的实施方式B,所述一种或多种另外的治疗活性化合物包含靶向另外的趋化因子受体的抗体或小分子,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1。靶向另外的趋化因子受体的合适抗体包括根据第6方面提供的抗体,例如CCR5抗体、CXCR5抗体、CCR4抗体、或Mogamulizumab。According to some preferred embodiments B of the third embodiment of aspect 22, the one or more additional therapeutically active compounds comprise antibodies or small molecules targeting additional chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1. Suitable antibodies targeting additional chemokine receptors include antibodies provided according to aspect 6, such as CCR5 antibody, CXCR5 antibody, CCR4 antibody, or Mogamulizumab.
与HER2或EGFR靶向抗体或分子的组合Combination with HER2 or EGFR-targeting antibodies or molecules
根据第22方面的第三实施方式的一些优选的实施方式C,所述一种或多种另外的治疗活性化合物包含靶向HER2和/或EGFR的抗体或小分子。靶向HER2的合适抗体是Trastuzumab(HER2;人源化IgG1),Pertuzumab(HER2;人源化IgG1),Ado-trastuzumabemtansine(HER2;人源化IgG1;ADC),[fam-]trastuzumab deruxtecan,fam-trastuzumabderuxtecan-nxki(HER2;人源化IgG1 ADC),Sacituzumab govitecan;sacituzumabgovitecan-hziy(TROP-2;人源化IgG1 ADC)和/或Margetuximab(HER2;嵌合IgG1).合适的靶向EGFR的抗体是Cetuximab(EGFR;嵌合IgG1),Panitumumab(EGFR;人IgG2),和Necitumumab(EGFR;人IgG1)。According to some preferred embodiments C of the third embodiment of aspect 22, the one or more additional therapeutically active compounds comprise antibodies or small molecules targeting HER2 and/or EGFR. Suitable antibodies targeting HER2 are Trastuzumab (HER2; humanized IgG1), Pertuzumab (HER2; humanized IgG1), Ado-trastuzumabemtansine (HER2; humanized IgG1; ADC), [fam-]trastuzumab deruxtecan, fam-trastuzumab deruxtecan-nxki (HER2; humanized IgG1 ADC), Sacituzumab govitecan; sacituzumab govitecan-hziy (TROP-2; humanized IgG1 ADC) and/or Margetuximab (HER2; chimeric IgG1). Suitable antibodies targeting EGFR are Cetuximab (EGFR; chimeric IgG1), Panitumumab (EGFR; human IgG2), and Necitumumab (EGFR; human IgG1).
与治疗性抗体的组合Combination with therapeutic antibodies
根据第22方面的第三实施方式的一些实施方式D,所述一种或多种另外的治疗活性化合物包含选自以下的另外的治疗性抗体:Muromonab-CD3(CD3;鼠IgG2a),Efalizumab(CD11a;人源化IgG1),Tositumomab-I131(CD20;鼠IgG2a),Nebacumab(Endotoxin;人IgM),Edrecolomab(EpCAM;鼠IgG2a),Catumaxomab(EPCAM/CD3;大鼠/小鼠双特异性mAb),Daclizumab(IL-2R;人源化IgG1),Abciximab(GPIIb/IIIa;嵌合IgG1 Fab),Rituximab(CD20;嵌合IgG1),Basiliximab(IL-2R;嵌合IgG1),Palivizumab(RSV;人源化IgG1),Infliximab(TNF;嵌合IgG1),Trastuzumab(HER2;人源化IgG1),Adalimumab(TNF;人IgG1),Ibritumomab tiuxetan(CD20;鼠IgG1),Omalizumab(IgE;人源化IgG1),Cetuximab(EGFR;嵌合IgG1),Bevacizumab(VEGF;人源化IgG1),Natalizumab(a4 integrin;人源化IgG4),Panitumumab(EGFR;人IgG2),Ranibizumab(VEGF;人源化IgG1Fab),Eculizumab(C5;人源化IgG2/4),Certolizumab pegol(TNF;人源化Fab,聚乙二醇化),Ustekinumab(IL-12/23;人IgG1),Canakinumab(IL-1β;人IgG1),Golimumab(TNF;人IgG1),Ofatumumab(CD20;人IgG1),Tocilizumab(IL-6R;人源化IgG1),Denosumab(RANK-L;人IgG2),Belimumab(BLyS;人IgG1),Ipilimumab(CTLA-4;人IgG1),Brentuximab vedotin(CD30;嵌合IgG1;ADC),Pertuzumab(HER2;人源化IgG1),Ado-trastuzumab emtansine(HER2;人源化IgG1;ADC),Raxibacumab(B.anthrasis PA;人IgG1),Obinutuzumab(CD20;人源化IgG1Glycoengineered),Siltuximab(IL-6;嵌合IgG1),Ramucirumab(VEGFR2;人IgG1),Vedolizumab(α4β7 integrin;人源化IgG1),Nivolumab(PD1;人IgG4),Pembrolizumab(PD1;人源化IgG4),Blinatumomab(CD19,CD3;鼠双特异性串联scFv),Alemtuzumab(CD52;人源化IgG1),Evolocumab(PCSK9;人IgG2),Idarucizumab(Dabigatran;人源化Fab),Necitumumab(EGFR;人IgG1),Dinutuximab(GD2;嵌合IgG1),Secukinumab(IL-17a;人IgG1),Mepolizumab(IL-5;人源化IgG1),Alirocumab(PCSK9;人IgG1),Daratumumab(CD38;人IgG1),Elotuzumab(SLAMF7;人源化IgG1),Ixekizumab(IL-17a;人源化IgG4),Reslizumab(IL-5;人源化IgG4),Olaratumab(PDGFRα;人IgG1),Bezlotoxumab(艰难梭菌肠毒素B;人IgG 1),Ateaolizumab(PD-L1;人源化IgG1),Obiltoxaximab(B.anthrasis PA;嵌合IgG1),Brodalumab(IL-17R;人IgG2),Dupilumab(IL-4Rα;人IgG4),Inotuzumabozogamicin(CD22;人源化IgG4;ADC),Guselkumab(IL-23p19;人IgG1),Sarilumab(IL-6R;人IgG1),Avelumab(PD-L1;人IgG1),Emicizumab(Factor Ixa,X;人源化IgG4,bispecific),Ocrelizumab(CD20;人源化IgG1),Benralizumab(IL-5Rα;人源化IgG1),Durvalumab(PD-L1;人IgG1),Gemtuzumab ozogamicin(CD33;人源化IgG4;ADC),Erenumab,erenumab-aooe(CGRP receptor;人IgG2),Galcanezumab,galcanezumab-gnlm(CGRP;人源化IgG4),Burosumab,burosumab-twza(FGF23;人IgG1),Lanadelumab,lanadelumab-flyo(Plasma kallikrelin;人IgG 1),Mogamulizumab,mogamulizumab-kpkc(CCR4;人源化IgG1),Tildrakizumab;tildrakizumab-asmn(IL-23 p19;人源化IgG1),Fremanezumab,fremanezumab-vfrm(CGRP;人源化IgG2),Ravulizumab,ravulizumab-cwvz(C5;人源化IgG2/4),Cemiplimab,cemiplimab-rwlc(PD-1;人mAb),Ibalizumab,ibalizumab-uiyk(CD4;人源化IgG4),Emapalumab,emapalumab-lzsg(IFNg;人IgG1),Moxetumomabpasudotox,moxetumomab pasudotox-tdfk(CD22;鼠IgG1dsFv免疫毒素),Caplacizumab,caplacizumab-yhdp(von Willebrand因子;人源化纳米抗体),Risankizumab,risankizumab-rzaa(IL-23p19;人源化IgG1),Polatuzumab vedotin,polatuzumabvedotin-piiq(CD79b;人源化IgG1ADC),Romosozumab,romosozumab-aqqg(Sclerostin;人源化IgG2),Brolucizumab,brolucizumab-dbll(VEGF-A;人源化scFv),Crizanlizumab;crizanlizumab-tmca(CD62(aka P-selectin);人源化IgG2),Enfortumab vedotin,enfortumab vedotin-ejfv(Nectin-4;人IgG1ADC),[fam-]trastuzumab deruxtecan,fam-trastuzumab deruxtecan-nxki(HER2;人源化IgG1 ADC),Teprotumumab,teprotumumab-trbw(IGF-1R;人IgG1),Eptinezumab,eptinezumab-jjmr(CGRP;人源化IgG1),Isatuximab,isatuximab-irfc(CD38;嵌合IgG1),Sacituzumab govitecan;sacituzumab govitecan-hziy(TROP-2;人源化IgG1ADC),Inebilizumab(CD19;人源化IgG1),Leronlimab(CCR5;人源化IgG4),Satralizumab(IL-6R;人源化IgG2),Narsoplimab(MASP-2,人IgG4),Tafasitamab(CD19;人源化IgG1),REGNEB3(Ebola病毒;mixture of3个人IgG1的混合),Naxitamab(GD2;人源化IgG1),Oportuzumab monatox(EpCAM;人源化scFv免疫毒素),Belantamabmafodotin(B-cell成熟抗原;人源化IgG1 ADC),Margetuximab(HER2;嵌合IgG1),Tanezumab(神经生长因子;人源化IgG2),Dostarlimab(TSR-042)(PD-1;人源化IgG4),Teplizumab(CD3;人源化IgG1),Aducanumab(β淀粉样蛋白;人IgG1),Sutimlimab(BIVV009)(C1s;人源化IgG4),Evinacumab(血管生成素样3;人IgG4)。According to some embodiments D of the third embodiment of aspect 22, the one or more additional therapeutically active compounds comprise additional therapeutic antibodies selected from: Muromonab-CD3 (CD3; mouse IgG2a), Efalizumab (CD11a; humanized IgG1), Tositumomab-I131 (CD20; mouse IgG2a), Nebacumab (Endotoxin; human IgM), Edrecolomab (EpCAM; mouse IgG2a), Catumaxomab (EPCAM/CD3; rat/mouse bispecific mAb), Dac lizumab (IL-2R; humanized IgG1), Abciximab (GPIIb/IIIa; chimeric IgG1 Fab), Rituximab (CD20; chimeric IgG1), Basiliximab (IL-2R; chimeric IgG1), Palivizumab (RSV; humanized IgG1), Infliximab (TNF; chimeric IgG1), Trastuzumab (HER2; humanized IgG1), Adalimumab (TNF; human IgG1), Ibritumomab tiuxetan (CD20; mouse I) IgG1), Omalizumab (IgE; humanized IgG1), Cetuximab (EGFR; chimeric IgG1), Bevacizumab (VEGF; humanized IgG1), Natalizumab (α4 integrin; humanized IgG4), Panitumumab (EGFR; human IgG2), Ranibizumab (VEGF; humanized IgG1Fab), Eculizumab (C5; humanized IgG2/4), Certolizumab pegol (TNF; humanized Fab, PEGylated), Ust ekinumab (IL-12/23; human IgG1), Canakinumab (IL-1β; human IgG1), Golimumab (TNF; human IgG1), Ofatumumab (CD20; human IgG1), Tocilizumab (IL-6R; humanized IgG1), Denosumab (RANK-L; human IgG2), Belimumab (BLyS; human IgG1), Ipilimumab (CTLA-4; human IgG1), Brentuximab vedotin (CD30; chimeric IgG1; ADC), P ertuzumab (HER2; humanized IgG1), Ado-trastuzumab emtansine (HER2; humanized IgG1; ADC), Raxibacumab (B. anthrasis PA; human IgG1), Obinutuzumab (CD20; humanized IgG1 Glycoengineered), Siltuximab (IL-6; chimeric IgG1), Ramucirumab (VEGFR2; human IgG1), Vedolizumab (α4β7 integrin; humanized IgG1), Nivolumab (PD1; human IgG4), Pembrolizumab (PD1; humanized IgG4), Blinatumomab (CD19, CD3; mouse bispecific tandem scFv), Alemtuzumab (CD52; humanized IgG1), Evolocumab (PCSK9; human IgG2), Idarucizumab (Dabigatran; humanized Fab), Necitumumab (EGFR; human IgG1), Dinutuximab (GD2; chimeric IgG1), Secukinumab (IL-17) a; human IgG1), Mepolizumab (IL-5; humanized IgG1), Alirocumab (PCSK9; human IgG1), Daratumumab (CD38; human IgG1), Elotuzumab (SLAMF7; humanized IgG1), Ixekizumab (IL-17a; humanized IgG4), Reslizumab (IL-5; humanized IgG4), Olaratumab (PDGFRα; human IgG1), Bezlotoxumab (Clostridium difficile enterotoxin B; human IgG1), Ateaolizumab (PD-L1; humanized IgG1), Obiltoxaximab (B. anthrasis PA; chimeric IgG1), Brodalumab (IL-17R; human IgG2), Dupilumab (IL-4Rα; human IgG4), Inotuzumabozogamicin (CD22; humanized IgG4; ADC), Guselkumab (IL-23p19; human IgG1), Sarilumab (IL-6R; human IgG1), Avelumab (PD-L1; human IgG1), Emicizumab (Factor) Ixa, X; humanized IgG4, bispecific), Ocrelizumab (CD20; humanized IgG1), Benralizumab (IL-5Rα; humanized IgG1), Durvalumab (PD-L1; human IgG1), Gemtuzumab ozogamicin (CD33; humanized IgG4; ADC), Erenumab, erenumab-aooe (CGRP receptor; human IgG2), Galcanezumab, galcanezumab-gnlm (CGRP; humanized IgG4), Burosumab, burosumab-twza (FGF23; human IgG1), Lanadelumab, lanadelumab-flyo (Plasma kallikrelin; human IgG1), Mogamulizumab, m ogamulizumab-kpkc (CCR4; humanized IgG1), Tildrakizumab; tildrakizumab-asmn (IL-23 p19; humanized IgG1), Fremanezumab, fremanezumab-vfrm ( CGRP (humanized IgG2), Ravulizumab, ravulizumab-cwvz (C5; humanized IgG2/4), Cemiplimab, cemiiplimab-rwlc (PD-1; human mAb), Ibalizumab, ibalizumab-uiyk (CD4; humanized IgG4), Emapalumab, emapalumab-lzsg (IFNg; human IgG1), Moxetumomabpasudotox, moxetumomab pasudotox-tdfk (CD22; mouse I gG1dsFv immunotoxin), Caplacizumab, caplacizumab-yhdp (von Willebrand factor; humanized nanobody), Risankizumab, risankizumab-rzaa (IL-23p19; humanized IgG1), Polatuzumab vedotin, polatuzumab vedotin-piiq (CD79b; humanized IgG1 ADC), Romosozumab, romosozumab-aqqg (Sclerostin; humanized IgG2), Brolucizumab, brolucizumab-dbll (VEGF-A; humanized scFv), crizanlizumab; crizanlizumab-tmca (CD62 (aka P-selectin); humanized IgG2), Enfo rtumab vedotin, enfortumab vedotin-ejfv (Nectin-4; human IgG1 ADC), [fam-]trastuzumab deruxtecan, fam-trastuzumab deruxtecan-n xki (HER2; humanized IgG1 ADC), Teprotumumab, teprotumumab-trbw (IGF-1R; human IgG1), Eptinezumab, eptinezumab-jjmr (CGRP; humanized IgG1), Isatuximab, isatuximab-irfc (CD38; chimeric IgG1), Sacituzumab govitecan; sacituzumab govitecan-hziy (TROP-2; humanized IgG1 ADC), Inebilizumab (CD19; humanized IgG1), Leronlimab (CCR5; humanized IgG4), Satralizumab (IL-6R; humanized IgG2), Narsoplimab (MASP-2, human IgG4), Tafasitamab (CD19; humanized IgG1), REGNEB3 (Ebola virus; mixture of 3 human IgG1s), Naxitamab (GD2; humanized IgG1), Oportuzumab monatox (EpCAM; humanized scFv immunotoxin), Belantama bmafodotin (B-cell maturation antigen; humanized IgG1 ADC), Margetuximab (HER2; chimeric IgG1), Tanezumab (nerve growth factor; humanized IgG2), Dostarlimab (TSR-042) (PD-1; humanized IgG4), Teplizumab (CD3; humanized IgG1), Aducanumab (β-amyloid protein; human IgG1), Sutimlimab (BIVV009) (C1s; humanized IgG4), Evinacumab (angiopoietin-like 3; human IgG4).
与任何这些另外治疗性抗体的组合治疗特别优选用于特异性表达所选的另外治疗性抗体的靶标的肿瘤。Combination therapy with any of these additional therapeutic antibodies is particularly preferred for tumors that specifically express the target of the selected additional therapeutic antibody.
根据第22方面的第3实施方式的一些实施方式E,一种或多种另外的治疗活性化合物包含靶向CD16a、ILDR2、PSMA或间皮素的另外的治疗性抗体。According to some embodiments E of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise additional therapeutic antibodies targeting CD16a, ILDR2, PSMA, or mesothelin.
与细胞毒性或细胞生长抑制剂的组合Combination with cytotoxic or cell growth inhibitors
几种化疗药物如多柔比星和奥沙利铂诱导免疫原性细胞死亡(ICD)。然而,发现ICD与抗CCR8抗体的响应有关,因此组合疗法可以为单一疗法的应用增加更多益处。Several chemotherapy drugs, such as doxorubicin and oxaliplatin, induce immunogenic cell death (ICD). However, ICD has been found to be associated with the response to anti-CCR8 antibodies, suggesting that combination therapy could add further benefits to the application of monotherapy.
根据第22方面的第三实施方式的一些实施方式F,一种或多种另外的治疗活性化合物包含选自以下的细胞生长抑制剂:放射性核素、烷化剂、DNA交联剂、DNA嵌入剂(例如,沟结合剂如小沟结合剂)、细胞周期调节剂、细胞凋亡调节剂、激酶抑制剂、蛋白质合成抑制剂、线粒体抑制剂、核输出抑制剂、拓扑异构酶I抑制剂、拓扑异构酶II抑制剂、RNA/DNA抗代谢物和抗有丝分裂剂。According to some embodiments F of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a cell growth inhibitor selected from: radionuclides, alkylating agents, DNA cross-linking agents, DNA intercalating agents (e.g., groove binding agents such as minor groove binding agents), cell cycle regulators, apoptosis regulators, kinase inhibitors, protein synthesis inhibitors, mitochondrial inhibitors, nuclear export inhibitors, topoisomerase I inhibitors, topoisomerase II inhibitors, RNA/DNA antimetabolites, and antimitotic agents.
烷化剂Alkylating agents
根据第22方面的第三个实施方式的一些实施方式F1,一种或多种另外的治疗活性化合物包含选自以下的烷化剂:asaley(L-亮氨酸,N-[N-乙酰基-4-[双-(2-氯乙基)氨基]-DL苯丙氨酸]-乙酯)的烷基化剂;AZQ(1,4-环己二烯-1,4-二氨基甲酸,2,5-双(1-氮丙啶基)-3,6-二氧代-二乙酯);BCNU(N,N′-双(2-氯乙基)-N-亚硝脲);丁砜(1,4-丁二醇二甲磺酸盐);(羧基邻苯二甲酸)铂;CBDCA(顺-(1,1-环丁烷二羧基)二胺铂(II));CCNU(N-(2-氯乙基)-N′-环己基-N-亚硝脲);CHIP(异丙铂;NSC 256927);氯霉素;氯佐菌素(2-[[[(2-氯乙基)亚硝基氨基]羰基]氨基]-2-脱氧-D-吡喃糖);顺式铂(顺铂);氯介子;氰基吗啉多柔比星;环二酮;二氢半乳糖醇(5,6-二羟基杜洛糖醇);氟多巴((5-[(2-氯乙基)-(2-氟乙基)氨基]-6-甲基-尿嘧啶);庚磺胺;斑蝥酮;吲哚美辛二聚体DGN462;美法仑;甲基CCNU((1-(2-氯乙基)-3-(反-4-甲基环己烷)-1-亚硝基脲);丝裂霉素C;米托唑胺;氮芥((双(2-氯乙基)甲胺盐酸盐);PCNU((1-(2-氯乙基)-3-(2,6-二氧代-3-哌啶基)-1-亚硝基脲));哌嗪烷基化剂(1-(2-氯乙基)-4-(3-氯丙基)-哌嗪盐酸盐);哌嗪二酮;哌嗪(N,N′-双(3-溴丙酰基)哌嗪);博菲霉素(N-甲基丝裂霉素C);螺旋海因芥;特罗西隆(异氰尿酸三缩水甘油酯);四拉丁语;硫代磷酸(N,N′,N″-三-1,2-乙二基硫代磷酰胺);三乙醇胺;尿嘧啶氮芥;Yoshi-864((双(3-甲氧基丙基)胺盐酸盐)。According to some embodiments F1 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise an alkylating agent selected from: asaley (an alkylating agent of L-leucine, N-[N-acetyl-4-[bis-(2-chloroethyl)amino]-DL-phenylalanine]-ethyl ester); AZQ (1,4-cyclohexadiene-1,4-dicarboxylic acid, 2,5-bis(1-aziridinyl)-3,6-dioxo-diethyl ester); BCNU (N,N′-bis(2-chloroethyl)-N-nitrosourea). ; sulfolane (1,4-butanediol dimethylsulfonate); (carboxyphthalic acid)platinum; CBDCA (cis-(1,1-cyclobutanedicarboxy)diamineplatin(II)); CCNU (N-(2-chloroethyl)-N′-cyclohexyl-N-nitrosourea); CHIP (isopropylplatinum; NSC 256927); chloramphenicol; chlorzolam (2-[[[(2-chloroethyl)nitrosoamino]carbonyl]amino]-2-deoxy-D-pyranose); cisplatin (cisplatin); chloramphenicol; cyanomorpholinodoxorubicin; cyclodione; dihydrogen monoxide Lactitol (5,6-dihydroxydurotol); Fluorodopa (5-[(2-chloroethyl)-(2-fluoroethyl)amino]-6-methyluracil); Heptylsulfamethoxazole; Cantharidin; Indomethacin dimer DGN462; Melphalan; Methyl CCNU (1-(2-chloroethyl)-3-(trans-4-methylcyclohexane)-1-nitrosourea); Mitomycin C; Mitozodamine; Nitrogen mustard (bis(2-chloroethyl)methylamine hydrochloride); PCNU (1-(2-chloroethyl)-3-(2,6-dioxo-3-piperidinyl) )-1-nitrosourea); piperazine alkylating agent (1-(2-chloroethyl)-4-(3-chloropropyl)-piperazine hydrochloride); piperazine dione; piperazine (N,N′-bis(3-bromopropionyl)piperazine); blepharomycin (N-methylmitomycin C); spiral hydantoin; teroselanone (triglycidyl isocyanurate); tetra-Latin; thiophosphate (N,N′,N″-tri-1,2-ethylenedimethylthiophosphoramide); triethanolamine; uracil nitrogen mustard; Yoshi-864 ((bis(3-methoxypropyl)amine hydrochloride).
DNA烷化样剂DNA alkylation agent
根据第22方面的第三个实施方式的一些实施方式F2,一种或多种另外的治疗活性化合物包含选自以下的DNA烷化样剂:顺铂;卡铂;奈达铂;奥沙利铂;沙铂;四硝酸三铂;丙卡巴肼;六甲胺;达卡巴嗪;米唑胺;替莫唑胺。According to some embodiments F2 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a DNA alkylating agent selected from the following: cisplatin; carboplatin; nedaplatin; oxaliplatin; saxaplatin; triplatin tetranitrate; procarbazine; hexamethylamine; dacarbazine; mirtazolamide; temozolomide.
烷基化抗肿瘤剂Alkylated antitumor agents
根据第22方面的第三个实施方式的一些实施方式F3,一种或多种另外的治疗活性化合物包含选自以下的烷基化抗肿瘤剂:碳醌;卡莫司汀;氯萘嗪;氯脲佐菌素;多卡霉素;异磷酰胺;福莫司汀;葡磷酰胺;洛莫司汀;甘露硫烷;尼莫司汀;菲铂;溴溴索;雷尼莫司汀;司马司汀;链脲佐菌素;硫特帕;硫丹;三亚醌;三乙烯三聚氰胺;三铂四硝酸盐。According to some embodiments F3 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise alkylated antitumor agents selected from: carboquinone; carmustine; chlornaphthazine; chlorzoxazone; docamycin; isophosphoramide; formustine; glucosamine; lomustine; mannitol; nimustine; phenanthreneplatin; bromide; ranimustine; semastine; streptozotocin; thiotetrafluoroethylene; endosulfan; triquinone; triethylene melamine; triplatin tetranitrate.
DNA复制和修复抑制剂DNA replication and repair inhibitors
根据第22方面的第三个实施方式的一些实施方式F4,一种或多种另外的治疗活性化合物包含选自以下的DNA复制和修复抑制剂:六甲糖胺;博来霉素;达卡巴嗪;更生霉素;米托布罗糖醇;丝裂霉素;平阳霉素;普霉素;丙卡巴肼;替莫唑胺;ABT-888(veliparib);奥拉帕尼;KU-59436;AZD-2281;AG-014699;BSI-201;BGP-15;INO-1001;ONO-2231。According to some embodiments F4 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a DNA replication and repair inhibitor selected from the following: hexamethasone; bleomycin; dacarbazine; styromycin; mitobronitol; mitomycin; bleomycin; propramycin; procarbazine; temozolomide; ABT-888 (veliparib); olaparib; KU-59436; AZD-2281; AG-014699; BSI-201; BGP-15; INO-1001; ONO-2231.
细胞周期调节剂Cell cycle regulators
根据第22方面的第三个实施方式的一些实施方式F5,一种或多种另外的治疗活性化合物包含细胞周期调节剂,例如紫杉醇;Nab-紫杉醇;多烯紫杉醇;长春新碱;长春碱;ABT-348;AZD-1152;MLN-8054;VX-680;Aurora A特异性激酶抑制剂;Aurora B特异性激酶抑制剂和泛Aurora激酶抑制剂;AZD-5438;BMI-1040;BMS-032;BMS-387;CVT-2584;黄酮吡啶醇;GPC-286199;MCS-5A;PD0332991;PHA-690509;seliciclib(CYC-202,R-roscovitines);ZK-304709;AZD4877,ARRY-520:GSK923295A。According to some embodiments F5 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise cell cycle regulators, such as paclitaxel; Nab-paclitaxel; docetaxel; vincristine; vinca alkaloid; ABT-348; AZD-1152; MLN-8054; VX-680; Aurora A-specific kinase inhibitor; Aurora B-specific kinase inhibitor and pan-Aurora kinase inhibitor; AZD-5438; BMI-1040; BMS-032; BMS-387; CVT-2584; flavonoid pyridinol; GPC-286199; MCS-5A; PD0332991; PHA-690509; seliciclib (CYC-202, R-roscovitines); ZK-304709; AZD4877; ARRY-520: GSK923295A.
细胞凋亡调节剂Apoptosis regulators
根据第22方面的第三个实施方式的一些实施方式F6,一种或多种另外的治疗活性化合物包含细胞凋亡调节剂,例如AT-101((-)棉酚);G3139或oblimersen(Bcl-2靶向反义寡核苷酸);IPI-194;IPI-565;N-(4-(4-((4′-氯(1,1′-联苯)-2-基)甲基)哌嗪-1-基苯甲酰基)-4-(((1R)-3-(二甲基氨基)-1-((苯硫基)甲基)丙基)氨基)-3-硝基苯磺酰胺;N-(4-(4-((2-(4-氯苯基)-5,5-二甲基-1-环己-1-en-1-基)甲基)哌嗪-1-基)苯甲酰基)-4-(((1R)-3-(吗啉-4-基)-1-((苯硫基)甲基)丙基)氨基)-3-((三氟甲基)磺酰基)苯磺酰胺;GX-070(1H-吲哚,2-(2-((3,5-二甲基-1H-吡咯-2-基)亚甲基)-3-甲氧基-2H-吡咯-5-基)-));HGS1029;GDC-0145;GDC-0152;LCL-161;LBW-242;维奈托克;靶向TRAIL或死亡受体(例如DR4和DR5)的药物,例如ETR2-ST01、GDC0145、HGS-1029、LBY-135、PRO-1762;靶向半胱天冬酶、半胱天冬酶调节剂、BCL-2家族成员、死亡结构域蛋白、TNF家族成员、Toll家族成员和/或NF-kappa-B蛋白的药物。According to some embodiments F6 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise an apoptosis regulator, such as AT-101 ((-)gossypol); G3139 or oblimersen (Bcl-2-targeted antisense oligonucleotide); IPI-194; IPI-565; N-(4-(((4′-chloro(1,1′-biphenyl)-2-yl)methyl)piperazin-1-ylbenzoyl)-4-(((1R)-3-(dimethylamino)-1-((phenylthio)methyl)propyl)amino)-3-nitrobenzenesulfonamide; N-(4-(4-((2-(4-chlorophenyl)-5,5-dimethyl-1-cyclohexyl-1-en-1-yl)methyl)piperazin-1-yl)benzoyl)-4-(((1R)-3-(morpholin-4-yl)-1-(( (Phenylthio)methyl)propyl)amino)-3-((trifluoromethyl)sulfonyl)benzenesulfonamide; GX-070(1H-indole, 2-(2-((3,5-dimethyl-1H-pyrrolo-2-yl)methylene)-3-methoxy-2H-pyrrolo-5-yl)-)); HGS1029; GDC-0145; GDC-0152; LCL-161; LBW-242; Venetoclax; Drugs targeting TRAIL or death receptors (e.g., DR4 and DR5), such as ETR2-ST01, GDC0145, HGS-1029, LBY-135, PRO-1762; Drugs targeting caspase, caspase modulators, BCL-2 family members, death domain proteins, TNF family members, Toll family members, and/or NF-kappa-B proteins.
血管生成抑制剂Angiogenesis inhibitors
根据第22方面的第三个实施方式的一些实施方式F7,一种或多种另外的治疗活性化合物包含血管生成抑制剂,例如ABT-869;AEE-788;阿昔替尼(AG-13736);AZD-2171;CP-547,632;IM-862;pegaptamib;索拉非尼;BAY43-9006;帕唑帕尼(GW-786034);vatalanib(PTK-787,ZK-222584);舒尼替尼;SU-11248;VEGF陷阱(trap);凡德他尼;ABT-165;ZD-6474;DLL4抑制剂。According to some embodiments F7 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise angiogenesis inhibitors, such as ABT-869; AEE-788; axitinib (AG-13736); AZD-2171; CP-547, 632; IM-862; pegaptamib; sorafenib; BAY43-9006; pazopanib (GW-786034); vatalanib (PTK-787, ZK-222584); sunitinib; SU-11248; VEGF trap; vandetanib; ABT-165; ZD-6474; DLL4 inhibitors.
蛋白酶体抑制剂Proteasome inhibitors
根据第22方面的第三个实施方式的一些实施方式F8,一种或多种另外的治疗活性化合物包含蛋白酶体抑制剂,例如硼替佐米;卡非佐米;环氧霉素;伊沙佐米;盐孢菌胺A。According to some embodiments F8 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a proteasome inhibitor, such as bortezomib; carfilzomib; cyclooxygenin; ixazomib; or halosporin A.
激酶抑制剂kinase inhibitors
根据第22方面的第三个实施方式的一些实施方式F9,一种或多种另外的治疗活性化合物包含激酶抑制剂,例如阿法替尼;阿昔替尼;博舒替尼;克唑替尼;达沙替尼;厄洛替尼;福斯塔替尼;吉非替尼;依鲁替尼;伊马替尼;拉帕替尼;乐伐替尼;穆布替尼;尼洛替尼;帕唑帕尼;培加他尼;索拉非尼;舒尼替尼;SU6656;凡德他尼;维罗非尼;CEP-701(来沙替尼);XL019;INCB018424(卢索替尼);ARRY-142886(塞来替尼);ARRY-438162(比尼美替尼);PD-325901;PD-98059;AP-23573;CCI-779;依维莫司;RAD-001;雷帕霉素;替西罗莫司;ATP竞争性TORC1/TORC2抑制剂,包括PI-103,PP242,PP30,Torin 1;LY294002;XL-147;CAL-120;ONC--21;AEZS--127;ETP--45658;PX--866;GDC--0941;BGT226;BEZ235;XL765,雷戈拉非尼和MEKi-1。According to some embodiments F9 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise kinase inhibitors, such as afatinib; axitinib; bosutinib; crizotinib; dasatinib; erlotinib; fostatinib; gefitinib; ibrutinib; imatinib; lapatinib; lenvatinib; mubutinib; nilotinib; pazopanib; peragatanib; sorafenib; sunitinib; SU6656; vandetanib; vemurafenib; CEP-701 (lesatinib); XL019; INCB018424 (ruxotetinib); ARRY-142886 (celecinib); ARRY-4381 62 (binimetinib); PD-325901; PD-98059; AP-23573; CCI-779; everolimus; RAD-001; rapamycin; tesiromolimus; ATP-competitive TORC1/TORC2 inhibitors, including PI-103, PP242, PP30, Torin 1; LY294002; XL-147; CAL-120; ONC-21; AEZS-127; ETP-45658; PX-866; GDC-0941; BGT226; BEZ235; XL765, regorafenib, and MEKi-1.
蛋白质合成抑制剂Protein synthesis inhibitors
根据第22方面的第三个实施方式的一些实施方式F10,一种或多种另外的治疗活性化合物包含蛋白质合成抑制剂,例如链霉素;双氢链霉素;新霉素;弗拉霉素;巴龙霉素;核糖霉素;卡那霉素;阿米卡星;阿贝卡星;贝卡那霉素;地贝卡星;妥布霉素;壮观霉素;潮霉素B;巴龙霉素;庆大霉素;奈替米星;西索米星;异帕米星;虫草霉素;星霉素;四环素;强力霉素;氯四环素;氯霉素;去甲金霉素;赖甲环素;甲氧环素;甲环素;米诺环素;土霉素;青霉环素;罗利四环素;四环素;甘氨酰环素;替加环素;恶唑烷酮类;哌唑酯;利奈唑胺;苯唑胺;雷地唑胺;兰贝唑胺;舒特唑胺;泰地唑胺;肽基转移酶抑制剂;氯霉素;阿齐达米考;甲砜霉素;氟苯尼考;侧耳素;瑞他莫林;泰妙菌素;沃尼穆林;阿奇霉素;克拉霉素;地红霉素;红霉素;氟红霉素;交沙霉素;麦迪霉素;米卡霉素;竹桃霉素;罗他霉素;罗红霉素;螺旋霉素;醋竹桃霉素;泰乐菌素;酮内酯;泰利霉素;赛红霉素;索利霉素;克林霉素;林可霉素;吡利霉素;链霉素;原始霉素;奎奴普汀/达福普汀;弗吉尼亚霉素。According to some embodiments F10 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise protein synthesis inhibitors, such as streptomycin; dihydrostreptomycin; neomycin; flammycin; paromomycin; ribostamycin; kanamycin; amikacin; abekacin; bekanamycin; dibekacin; tobramycin; spectinomycin; hygromycin B; paromomycin; gentamicin; netilmicin; sisomicin; isipamicin; cordycepsmycin; astromycin; tetracycline; doxycycline; chlortetracycline; chloramphenicol; demethylchlortetracycline; lysine; methoxycycline; methylcycline; minocycline; oxytetracycline; penicillin; rolitetracycline; tetracycline; glycylcycline. Tigecycline; Oxazolidinones; Piperazolyl ester; Linezolid; Oxazolamide; Redizolamide; Lanbezolid; Sultezolid; Tedizolamide; Peptidyl transferase inhibitors; Chloramphenicol; Azidamico; Thiamphenicol; Florfenicol; Pleurotus ostreatus; Retamoline; Tiamulin; Vonimulin; Azithromycin; Clarithromycin; Dierythromycin; Erythromycin; Fluerythromycin; Josamycin; Midecamycin; Micardiitis; Pyruvicin; Rotamycin; Roxithromycin; Spiramycin; Pyruvicin; Ketoconazole; Telithromycin; Cypermethrin; Solithromycin; Clindamycin; Lincomycin; Pirimibacin; Streptomycin; Primalmycin; Quinupertin/Dalfopristin; Virginiamycin.
组蛋白去乙酰化酶抑制剂Histone deacetylase inhibitors
根据第22方面的第三个实施方式的一些实施方式F11,一种或多种另外的治疗活性化合物包含组蛋白去乙酰化酶抑制剂,例如伏立诺他;罗米地辛;西达本胺;帕比司他;丙戊酸;贝利司他;莫西司他;abexinostat;恩替司他;SB939(pracinostat);瑞米司他;吉维司他;奎辛司他;硫脲基丁腈(KevetrinTM);CUDC-10;CHR-2845(替非司他);CHR-3996;4SC-202;CG200745;ACY-1215(罗西林司他);ME-344;萝卜硫素。According to some embodiments F11 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise histone deacetylase inhibitors, such as vorinostat; romidesin; chidamide; pabisostat; valproic acid; belistat; moxistat; abexinostat; entecavir; SB939 (pracinostat); remistat; gilvestartar; quinacrinestat; thiourea-butyronitrile (Kevetrin ™ ); CUDC-10; CHR-2845 (tefilstat); CHR-3996; 4SC-202; CG200745; ACY-1215 (roxilinstat); ME-344; sulforaphane.
拓扑异构酶I抑制剂Topoisomerase I inhibitors
根据第22方面的第三个实施方式的一些实施方式F12,一种或多种另外的治疗活性化合物包含拓扑异构酶I抑制剂,例如喜树碱;各种喜树碱衍生物和类似物(例如,NSC100880,NSC 603071,NSC 107124,NSC 643833,NSC 629971,NSC 295500,NSC 249910,NSC606985,NSC 74028,NSC 176323,NSC 295501,NSC 606172,NSC 606173,NSC 610458,NSC618939,NSC 610457,NSC 610459,NSC 606499,NSC 610456,NSC 364830,and NSC606497);吗啉异柔比星;SN-38。According to some embodiments F12 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a topoisomerase I inhibitor, such as camptothecin; various camptothecin derivatives and analogs (e.g., NSC100880, NSC 603071, NSC 107124, NSC 643833, NSC 629971, NSC 295500, NSC 249910, NSC60698). 5, NSC 74028, NSC 176323, NSC 295501, NSC 606172, NSC 606173, NSC 610458, NSC618939, NSC 610457, NSC 610459, NSC 606499, NSC 610456, NSC 364830, and NSC606497); Morphyrin isoxastatin; SN-38.
拓扑异构酶II抑制剂Topoisomerase II inhibitors
根据第22方面的第三个实施方式的一些实施方式F13,一种或多种另外的治疗活性化合物包含拓扑异构酶II抑制剂,例如多柔比星;amonafide(苯并异喹啉二酮);m-AMSA(4′-(9-吖啶基氨基)-3′-甲氧基甲磺酰苯胺);蒽吡唑衍生物((NSC 355644);依托泊苷(VP-16);吡唑并吖啶((吡唑并[3,4,5-kl]吖啶-2(6H)-丙胺,9-甲氧基-N,N-二甲基-5-硝基-,单甲磺酸盐);盐酸比生群;柔红霉素;脱氧阿霉素;米托蒽醌;美诺加林;N,N-二苄柔红霉素;奥蒽唑;鲁必达宗;替尼泊苷。According to some embodiments F13 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise topoisomerase II inhibitors, such as doxorubicin; amonafide (benzisoquinolinedione); m-AMSA (4′-(9-acridylamino)-3′-methoxymethanesulfonylaniline); anthraquinone derivative ((NSC 355644); etoposide (VP-16); pyrazoloacridin ((pyrazolo[3,4,5-kl]acridin-2(6H)-propylamine, 9-methoxy-N,N-dimethyl-5-nitro-,monosulfonate); piracetam hydrochloride; daunorubicin; deoxydaunorubicin; mitoxantrone; minogalin; N,N-dibenzyldaunorubicin; orantrone; rubidazine; teniposide.
DNA嵌入剂DNA intercalating agent
根据第22方面的第三个实施方式的一些实施方式F14,一种或多种另外的治疗活性化合物包含DNA嵌入剂,例如蒽霉素;奇霉素A;托马霉素;DC-81;西布罗霉素;吡咯并二氮杂吡啶衍生物;SGD-1882((S)-2-(4-氨基苯基)-7-甲氧基-8-(3S)-7-乙氧基-2-(4-甲氧基苯基)-5-氧代-5,11-二氢-1H-苯并[e]吡咯并[1,2-a][1,4]二氮杂辛-8-基)氧基)丙氧基)-1H苯并[e]吡咯并[1,2-a][1,4]氮杂辛-5(11aH)-酮);SG2000(SJG-136;(11a S,11a′S)-8,8′-(丙烷-1,3-二基双(氧基))双(7-甲氧基-2-亚甲基-2,3-二氢-1H-苯并[e]吡咯并[1,2-a][1,4]二氮杂-5(11aH)-酮))。According to some embodiments F14 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a DNA intercalating agent, such as anthramycin; zithromycin A; tomatine; DC-81; sibromycin; pyrrolodiazapyridine derivatives; SGD-1882((S)-2-(4-aminophenyl)-7-methoxy-8-(3S)-7-ethoxy-2-(4-methoxyphenyl)-5-oxo-5,11-dihydro-1H-benzo[e]pyrrolo[1, 2-a][1,4]diazaoct-8-yl)oxy)propoxy)-1Hbenzo[e]pyrrolo[1,2-a][1,4]azaoct-5(11aH)-one); SG2000(SJG-136; (11a S, 11a′S)-8,8′-(propane-1,3-diylbis(oxy))bis(7-methoxy-2-methylene-2,3-dihydro-1H-benzo[e]pyrrolo[1,2-a][1,4]diaza-5(11aH)-one)).
RNA/DNA抗代谢物RNA/DNA antimetabolites
根据第22方面的第三个实施方式的一些实施方式F15,一种或多种另外的治疗活性化合物包含吉西他滨;L-腺苷;5-氮杂胞苷;5-氟尿嘧啶;阿西维素;氨基蝶呤衍生物N-[2-氯-5[[(2,4-二氨基-5-甲基-6-喹唑啉基)甲基]氨基]苯甲酰基]L-天冬氨酸(NSC132483);氨基蝶呤衍生物N-[4-[[(2,4-二氨基-5-乙基-6-喹唑啉基)甲基]氨基]苯甲酰基]L-天冬氨酸;氨基蝶呤衍生物N-[2-氯-4-[[(2,4-二氨基-6-蝶啶基)甲基]氨基]苯甲酰基]L-天冬氨酸一水合物;抗叶酸剂PT523((Nα-(4-氨基-4-脱氧蝶酰基)-Nγ-半邻苯二甲酰基-L-鸟氨酸));Baker的可溶性抗叶酸(NSC 139105);二氯烯丙基劳松((2-(3,3-二氯烯基)-3-羟基-1,4-萘醌);布雷奎纳;氟替呋((前药;5-氟-1-(四氢-2-呋喃基)-尿嘧啶);5,6-二氢-5-氮杂胞苷;甲氨蝶呤;甲氨蝶呤衍生物(N-[[4-[[(2,4-二氨基-6-蝶啶基)甲基]甲基氨基]-1-萘基]羰基]-L-谷氨酸);PALA((N-(膦酰基)-L-天冬氨酸);吡唑福林;甲氨蝶呤。According to some embodiments F15 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise gemcitabine; L-adenosine; 5-azacytidine; 5-fluorouracil; acetivorin; aminopterin derivative N-[2-chloro-5-[[(2,4-diamino-5-methyl-6-quinazolinyl)methyl]amino]benzoyl]L-aspartic acid (NSC132483); aminopterin derivative N-[4-[[(2,4-diamino-5-ethyl-6-quinazolinyl)methyl]amino]benzoyl]L-aspartic acid; aminopterin derivative N-[2-chloro-4-[[(2,4-diamino-6-pteridyl)methyl]amino]benzoyl]L-aspartic acid monohydrate; anti- Folic acid PT523 ((Nα-(4-amino-4-deoxypteroyl)-Nγ-hemiphthaloyl-L-ornithine)); Baker's soluble antifolic acid (NSC 139105); dichloroallylloxacin ((2-(3,3-dichloroenyl)-3-hydroxy-1,4-naphthoquinone); Brefinar; flutifu ((prodrug; 5-fluoro-1-(tetrahydro-2-furanyl)-uracil); 5,6-dihydro-5-azacytidine; methotrexate; methotrexate derivative (N-[[4-[[(2,4-diamino-6-pterodinyl)methyl]methylamino]-1-naphthyl]carbonyl]-L-glutamic acid); PALA ((N-(phosphonyl)-L-aspartic acid); pyrazolylphosphonate; methotrexate.
DNA抗代谢物DNA antimetabolites
根据第22方面的第三个实施方式的一些实施方式F16,一种或多种另外的治疗活性化合物包含DNA抗代谢物,例如3-HP;2′-脱氧-5-氟尿苷;5-HP;α-TGDR(α-2′-脱氧6-硫鸟苷);阿非迪霉素甘氨酸盐;ara C(阿糖胞苷);5-aza-2′-脱氧胞苷;β-TGDR(β-2′-脱氧6-硫鸟苷);环胞苷;胍唑;羟基脲;肌苷糖二醛;麦克菌素II;吡唑并咪唑;硫鸟嘌呤;硫嘌呤。According to some embodiments F16 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise DNA antimetabolites, such as 3-HP; 2′-deoxy-5-fluorouridine; 5-HP; α-TGDR (α-2′-deoxy-6-thioguanosine); afenidimycin glycinate; ara C (cytarabine); 5-aza-2′-deoxycytidine; β-TGDR (β-2′-deoxy-6-thioguanosine); cyclocytidine; guanidine; hydroxyurea; inosine dialdehyde; macrocin II; pyrazoimidazole; thioguanine; thiopurine.
线粒体抑制剂Mitochondrial inhibitors
根据第22方面的第三个实施方式的一些实施方式F17,一种或多种另外的治疗活性化合物包含线粒体抑制剂,例如胰酶抑素;苯潘他汀;罗丹明-123;雪草碱;d-α-生育酚琥珀酸酯;化合物11β;阿司匹林;椭圆菌素;黄连素;天青素;GX015-070(1H-吲哚,2-(2-((3,5-二甲基-1H-吡咯-2-基)亚甲基)-3-甲氧基-2H-吡咯-5-基)-);雷公藤酚(雷公藤碱);二甲双胍;亮绿色;ME-344。According to some embodiments F17 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise mitochondrial inhibitors, such as trypsin; benpanstatin; rhodamine-123; senna; d-α-tocopherol succinate; compound 11β; aspirin; elutin; berberine; azuril; GX015-070(1H-indole, 2-(2-((3,5-dimethyl-1H-pyrrolo-2-yl)methylene)-3-methoxy-2H-pyrrolo-5-yl)-); tripterygium oleate; metformin; bright green; ME-344.
抗有丝分裂剂Antimitotic agents
根据第22方面的第三个实施方式的一些实施方式F18,一种或多种另外的治疗活性化合物包含抗有丝分裂剂,例如别秋水仙碱;auristatin,例如MMAE(单甲基auristatinE)和MMAF(单甲基auristatin F);软海绵素B;西马多汀;秋水仙碱;秋水仙碱衍生物(N-苯甲酰-脱乙酰基苯甲酰胺);海兔毒素10;海兔毒素15;美登素;美登木素生物碱,例如DM1(N2′-脱乙酰基-N2′-(3-巯基-1-氧代丙基)-美登素);罗佐辛;紫杉醇;紫杉醇衍生物((2′-N-[3-(二甲基氨基)丙基]戊二酸紫杉醇);多烯紫杉醇;硫秋水仙碱;三苯甲基半胱氨酸;硫酸长春碱;硫酸长春新碱。According to some embodiments F18 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise an antimitotic agent, such as allocolchicine; auristatin, such as MMAE (monomethyl auristatin E) and MMAF (monomethyl auristatin F); squalene B; simadotin; colchicine; colchicine derivative (N-benzoyl-deacetylated benzamide); slug toxin 10; slug toxin 15; maytansine; maytansine alkaloids, such as DM1 (N2′-deacetylated-N2′-(3-mercapto-1-oxopropyl)-matansine); rosocine; paclitaxel; paclitaxel derivative ((2′-N-[3-(dimethylamino)propyl]glutaric acid paclitaxel); docetaxel; thiocolchicine; triphenylmethylcysteine; vincristine sulfate; vincristine sulfate.
核输出抑制剂Nuclear output inhibitor
根据第22方面的第三个实施方式的一些实施方式F19,一种或多种另外的治疗活性化合物包含核输出抑制剂,例如callystatin A;内酯霉素;KPT-185(丙-2-基(Z)-3-[3-[3-甲氧基-5-(三氟甲基)苯基]-1,2,4-三唑-1-基]丙-2-烯酸酯);卡苏霉素A;瘦素;钩端呋喃A;来普霉素B;拉贾酮;Verdinexor((Z)-3-[3-[3,5-双(三氟甲基)苯基]-1,2,4-三唑-1-基]-N-吡啶-2-基丙基-2-烯酰肼)。According to some embodiments F19 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise nuclear export inhibitors, such as callystatin A; lactamycin; KPT-185 (propyl-2-yl(Z)-3-[3-[3-methoxy-5-(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]propyl-2-enoate); cassumycin A; leptin; leptofuran A; leptomycin B; rajadone; Verdinexor ((Z)-3-[3-[3,5-bis(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]-N-pyridin-2-ylpropyl-2-enoylhydrazine).
激素治疗剂Hormone therapy
根据第22方面的第三个实施方式的一些实施方式F20,一种或多种另外的治疗活性化合物包含激素治疗剂,例如阿那曲唑;依西美坦;阿佐昔芬;比卡鲁胺;西曲瑞克;地加瑞克;地洛瑞林;三氯烷;地塞米松;氟他胺;雷洛昔芬;法唑;托瑞米芬;氟维司群;来曲唑;福美坦;糖皮质激素;阿霉素;司维拉姆碳酸盐;拉索昔芬;醋酸亮丙瑞林;甲地孕酮;米非司酮;尼鲁米特;柠檬酸他莫昔芬;阿巴瑞克;强的松;非那雄胺;利洛司坦;布舍瑞林;促黄体激素释放激素(LHRH);组胺;曲洛司坦或莫德拉斯坦;佛瑞林;戈舍瑞林。According to some embodiments F20 of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise hormonal therapeutic agents, such as anastrozole; exemestane; azoxifen; bicalutamide; cetrorex; degarelix; dilorelin; trichloroethane; dexamethasone; flutamide; raloxifene; fazodone; toremifene; fulvestrant; letrozole; formetanin; glucocorticoids; doxorubicin; sevelamer carbonate; lasoxifene; leuprorelin acetate; medroxyprogesterone acetate; mifepristone; nilumet; tamoxifen citrate; abalinix; prednisone; finasteride; lilosterone; buterelin; luteinizing hormone-releasing hormone (LHRH); histamine; trelosterone or modrastan; frenelin; goserelin.
根据第22方面的第三实施方案的一些实施方式G,一种或多种另外的治疗活性化合物包含靶向骨髓抑制细胞的抗体。According to some embodiments G of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise antibodies that target myeloid suppressor cells.
根据第22方面的第三个实施方案的一些实施方式H,一种或多种另外的治疗活性化合物包含引发抗原呈递细胞(APC)的试剂,APC又可以激活T细胞。According to some embodiments H of the third embodiment of aspect 22, one or more additional therapeutically active compounds contain an agent that induces antigen-presenting cells (APCs), which in turn can activate T cells.
根据第22方面的第三个实施方式的一些实施方式I,一种或多种另外的治疗活性化合物包含BiTE抗体。BiTE抗体是双特异性抗体,可通过同时结合两种细胞来引导T细胞攻击癌细胞。然后T细胞攻击靶细胞,即Treg。例如,BiTE方法是对基于ADCC的裸露CCR8抗体方法的补充。According to some embodiments of the third embodiment of aspect 22, one or more additional therapeutically active compounds comprise a BiTE antibody. The BiTE antibody is a bispecific antibody that can guide T cells to attack cancer cells by simultaneously binding to two types of cells. The T cells then attack the target cells, i.e., Tregs. For example, the BiTE method complements the naked CCR8 antibody method based on ADCC.
标准疗法Standard therapy
根据第22方面的第三个实施方式的一些实施方式J,该组合是与以趋化因子受体阳性(例如CCR8阳性细胞)为特征的肿瘤或疾病的标准治疗的组合。该标准治疗可以是用于以下任一种的标准治疗:T细胞急性淋巴细胞白血病、乳腺癌、三阴性乳腺癌、三阳性乳腺癌、非小细胞肺癌(NSCLC)、睾丸癌、胃癌、头颈部鳞状细胞癌、胸腺瘤、食管腺癌、结直肠癌、胰腺癌、卵巢癌或宫颈癌、急性髓性白血病、肾癌、膀胱癌、黑色素瘤、甲状腺癌、间皮瘤、肉瘤和前列腺癌。According to some embodiments J of the third embodiment of aspect 22, the combination is a combination with a standard treatment for a tumor or disease characterized by chemokine receptor positivity (e.g., CCR8 positive cells). This standard treatment may be a standard treatment for any of the following: T-cell acute lymphoblastic leukemia, breast cancer, triple-negative breast cancer, triple-positive breast cancer, non-small cell lung cancer (NSCLC), testicular cancer, gastric cancer, head and neck squamous cell carcinoma, thymoma, esophageal adenocarcinoma, colorectal cancer, pancreatic cancer, ovarian cancer or cervical cancer, acute myeloid leukemia, kidney cancer, bladder cancer, melanoma, thyroid cancer, mesothelioma, sarcoma, and prostate cancer.
根据一些优选的实施方式,标准治疗是用于治疗头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食管肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗。如有疑问,标准治疗定义为相应肿瘤的″S3 Leitlinie”,例如,肛门癌、光化性角化病和皮肤鳞状细胞癌、慢性淋巴细胞白血病(CLL)、子宫内膜癌、滤泡性淋巴瘤、膀胱癌、皮肤癌预防、肝细胞癌(HCC)、睾丸肿瘤、霍奇金淋巴瘤、结直肠癌、喉癌癌、肺癌、胃癌、乳腺癌、黑色素瘤、口腔癌、肾细胞癌、卵巢癌、食道癌、姑息治疗、胰腺癌、阴茎癌、前列腺癌、心理肿瘤学、支持疗法、宫颈癌,于2020-06-26生效,cf.https://www.leitlinienprogramm-onkologie.de/leitlinien/,于2021年1月6日的全部内容通过引用并入本文。According to some preferred embodiments, standard treatment is the standard treatment for head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer and/or prostate cancer. In case of doubt, the standard treatment is defined as "S3 Leitlinie" for the corresponding tumor, such as anal cancer, actinic keratosis and squamous cell carcinoma of the skin, chronic lymphocytic leukemia (CLL), endometrial cancer, follicular lymphoma, bladder cancer, skin cancer prevention, hepatocellular carcinoma (HCC), testicular tumors, Hodgkin's lymphoma, colorectal cancer, laryngeal cancer, lung cancer, gastric cancer, breast cancer, melanoma, oral cancer, renal cell carcinoma, ovarian cancer, esophageal cancer, palliative care, pancreatic cancer, penile cancer, prostate cancer, psycho-oncology, supportive care, and cervical cancer, effective June 26, 2020, cf. https://www.leitlinienprogramm-onkologie.de/leitlinien/, the entire contents of which are incorporated herein by reference on January 6, 2021.
放射疗法Radiation therapy
根据第22方面的第三实施方式的一些实施方式K,其可以并且被建议与根据第22方面的第一和/或第二实施方式的实施方式组合,该用途是与放射疗法同时的、分开、或顺序组合使用。According to some embodiments K of the third embodiment of aspect 22, it can and is suggested to be combined with embodiments of the first and/or second embodiments of aspect 22, for use in conjunction with, separate from, or in combination with radiotherapy.
例如,放射疗法可以是涉及本领域已知的放射方案的疗法,例如包括通过X射线进行的外照射治疗,典型总剂量为40Gy,分为15次每日治疗,或总剂量为70Gy,分为37次每日治疗。例如,放射疗法可以是近距离放射疗法。实施例12.6.8显示了抗CCR8抗体和放疗的组合治疗。For example, radiotherapy can be a therapy involving radiation protocols known in the art, such as external beam radiation therapy via X-rays, typically with a total dose of 40 Gy divided into 15 daily treatments, or a total dose of 70 Gy divided into 37 daily treatments. For example, radiotherapy can be brachytherapy. Example 12.6.8 illustrates a combination therapy of anti-CCR8 antibody and radiotherapy.
NK细胞疗法NK cell therapy
根据第22方面的第三实施方式的一些实施方式L,其可以并且被建议与根据第22方面的第一和/或第二实施方式的实施方式组合,该用途是与NK细胞疗法同时、分开、或顺序组合使用。例如,NK细胞疗法可以包括使用EP1771471中描述的工程化NK细胞系,或者可以包括使用分离的原代NK细胞,可能包括嵌合受体等修饰,参见WO2006052534。According to some embodiments L of the third embodiment of aspect 22, it can and is suggested to be combined with embodiments of the first and/or second embodiments of aspect 22, for use in conjunction with NK cell therapy, either simultaneously, separately, or sequentially. For example, NK cell therapy may include the use of engineered NK cell lines as described in EP1771471, or may include the use of isolated primary NK cells, possibly including modifications such as chimeric receptors, see WO2006052534.
靶向与T细胞激活相关的细胞表面分子Targeting cell surface molecules associated with T cell activation
根据第22方面的第三实施方式的一些实施方式M,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面,或根据第19方面的缀合物或根据第20方面的药物组合物,用于与靶向与T细胞激活相关的细胞表面分子的一种或多种另外的治疗活性化合物同时、分开或顺序组合使用,选自CD25、CTLA-4、PD-1、LAG3、TIGIT、ICOS和TNF受体超家族成员、4-1BB、OX-40和GITR。According to some embodiments M of the third embodiment of aspect 22, conjugates according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or conjugates according to aspect 19, or pharmaceutical compositions according to aspect 20, are provided for use simultaneously, separately or sequentially in combination with one or more additional therapeutically active compounds that target cell surface molecules associated with T cell activation, selected from CD25, CTLA-4, PD-1, LAG3, TIGIT, ICOS and TNF receptor superfamily members, 4-1BB, OX-40 and GITR.
B细胞耗竭B cell depletion
根据第22方面的第三实施方式的一些实施方式N,其可以并且被建议与根据第22方面的第一和/或第二实施方式的实施方式组合,该用途是与肿瘤内B细胞耗竭同时、分开、或顺序组合使用。肿瘤内B细胞耗竭可通过施用抗体或其他分子或特异性靶向肿瘤内B细胞(优选地CD19+B细胞)的任何另外的治疗而发生。实施例12.3.2显示了一种治疗,其中施用了抗CCR8抗体并耗竭了肿瘤内CD19+B细胞。虽然CD8+T细胞耗竭消除了抗CCR8抗体治疗的有益效果,但令人惊讶地发现,B细胞耗竭改善了抗CCR8抗体治疗的有益效果。不受限制地,可通过使用靶向CD 19或CD20的抗体或另一种合适的B细胞标志物来耗竭B细胞。According to some embodiments N of the third embodiment of aspect 22, it can and is suggested to be combined with embodiments of the first and/or second embodiments of aspect 22, the use being simultaneous, separate, or sequentially combined with intratumoral B cell depletion. Intratumoral B cell depletion can occur by administering antibodies or other molecules or any additional treatment specifically targeting intratumoral B cells (preferably CD19+ B cells). Example 12.3.2 shows a treatment in which an anti-CCR8 antibody is administered and intratumoral CD19+ B cells are depleted. While CD8+ T cell depletion negates the beneficial effects of anti-CCR8 antibody treatment, it was surprisingly found that B cell depletion improves the beneficial effects of anti-CCR8 antibody treatment. Without limitation, B cells can be depleted by using antibodies targeting CD19 or CD20 or another suitable B cell marker.
分层/预测和监测方案Stratification/Prediction and Monitoring Scheme
根据以下实施方式描述的分层步骤也作为独立方法提供,例如用于抗CCR8抗体治疗的分层、诊断或治疗成功监测。The stratification steps described in the following embodiments are also provided as standalone methods, such as stratification, diagnosis, or monitoring of treatment success for anti-CCR8 antibody therapy.
根据第22方面的一些第四实施方式,其可以并且被建议与根据第22方面的第一、第二和/或第三实施方式的实施方式组合,该用途包括确定某些参数以预测或监测治疗成功,例如用于对一组受试者或患者进行分层以预测肿瘤响应或监测治疗成功。例如,受试者可以是人类或非人类,例如小鼠、啮齿动物或食蟹猴。According to some fourth embodiments of aspect 22, it may and is suggested to be combined with embodiments according to the first, second, and/or third embodiments of aspect 22, the use including determining certain parameters to predict or monitor treatment success, for example, for stratifying a group of subjects or patients to predict tumor response or monitor treatment success. For example, subjects may be human or non-human, such as mice, rodents, or cynomolgus monkeys.
根据第22方面的第四实施方式的一些实施方式A,该用途包括确定According to some embodiments A of the fourth embodiment of aspect 22, the use includes determining
a.肿瘤浸润淋巴细胞的存在或数量,a. The presence or number of tumor-infiltrating lymphocytes
b.巨噬细胞和/或NK细胞的存在或数量,b. Presence or number of macrophages and/or NK cells
c.CCR8阳性或FOXP3阳性调节性T细胞的存在或数量,c. The presence or number of CCR8-positive or FOXP3-positive regulatory T cells.
d.肿瘤突变负荷,d. Tumor mutation burden,
e.癌症分期,e. Cancer staging
f.干扰素刺激基因或蛋白的存在、水平或激活,f. The presence, level, or activation of interferon-stimulated genes or proteins.
g.CCR8表达,g.CCR8 expression,
h.补体因子蛋白、丝氨酸蛋白酶抑制剂和/或MHC成分的存在或数量,h. The presence or quantity of complement factor proteins, serine protease inhibitors, and/or MHC components.
i.细胞因子的存在或数量,例如炎性或抑制性细胞因子,i. The presence or quantity of cytokines, such as inflammatory or inhibitory cytokines.
j.激活免疫基因表达,j. Activate immune gene expression,
k.免疫检查点蛋白表达,如PD-(L)1或CTLA4表达,k. Expression of immune checkpoint proteins, such as PD-(L)1 or CTLA4.
1.肿瘤浸润CD19+B细胞的存在或数量,和/或1. The presence or number of tumor-infiltrating CD19+ B cells, and/or
m.肿瘤浸润性CD8+T细胞的存在或数量,m. The presence or number of tumor-infiltrating CD8+ T cells
用于对一组受试者或患者进行分层以预测肿瘤反应,或用于预测或监测治疗成功。Used to stratify a group of subjects or patients to predict tumor response, or to predict or monitor treatment success.
根据第22方面的第四实施方式的一些实施方式A1,该用途包括测定(a)肿瘤浸润淋巴细胞、(b)巨噬细胞和/或NK细胞、和/或(c)CCR8阳性或FOXP3阳性调节性T细胞的存在或数量。评估细胞类型的存在或数量,例如(a)肿瘤浸润淋巴细胞,(b)巨噬细胞和/或NK细胞,和/或(c)CCR8阳性调节性T细胞可以通过活检进行,例如皮肤活检、手术活检、内窥镜活检或穿刺活检,例如细针穿刺活检、空芯针活检、真空辅助活检或图像引导活检和随后的染色。然后可以将(a)肿瘤浸润淋巴细胞、(b)巨噬细胞和/或NK细胞和/或(c)CCR8阳性调节性T细胞的数量或相对量与参考进行比较,例如参考样本或参考值。(a)肿瘤浸润淋巴细胞、(b)巨噬细胞和/或NK细胞和/或(c)CCR8阳性调节性T细胞的相对存在或数量可用于预测对本发明的抗体或片段治疗的有利反应。或者,可以使用评分系统,例如确定肿瘤浸润淋巴细胞的数量或相对量,如Zhang,Dachuan,et al.″Scoring system for tumor-infiltratinglymphocytes and its prognostic value for gastric cancer.″Frontiers inimmunology 10(2019):71中描述的评分系统。According to some embodiments A1 of the fourth embodiment of aspect 22, the use includes determining the presence or number of (a) tumor-infiltrating lymphocytes, (b) macrophages and/or NK cells, and/or (c) CCR8-positive or FOXP3-positive regulatory T cells. Assessing the presence or number of cell types, such as (a) tumor-infiltrating lymphocytes, (b) macrophages and/or NK cells, and/or (c) CCR8-positive regulatory T cells, can be performed via biopsy, such as skin biopsy, surgical biopsy, endoscopic biopsy, or needle biopsy, such as fine-needle aspiration biopsy, core needle biopsy, vacuum-assisted biopsy, or image-guided biopsy, followed by staining. The number or relative amount of (a) tumor-infiltrating lymphocytes, (b) macrophages and/or NK cells, and/or (c) CCR8-positive regulatory T cells can then be compared with a reference, such as a reference sample or reference value. The relative presence or number of (a) tumor-infiltrating lymphocytes, (b) macrophages and/or NK cells and/or (c) CCR8-positive regulatory T cells can be used to predict a favorable response to the antibody or fragment therapy of the present invention. Alternatively, a scoring system can be used, for example, to determine the number or relative amount of tumor-infiltrating lymphocytes, such as the scoring system described in Zhang, Dachuan, et al. "Scoring system for tumor-infiltrating lymphocytes and its prognostic value for gastric cancer." Frontiers in Immunology 10 (2019): 71.
根据第22方面的第四实施方式的一些实施方式A2,该用途包括确定肿瘤突变负荷以预测和监测肿瘤响应。肿瘤突变负荷(TMB)是一种生物标志物,用于测量癌症患者肿瘤中存在的体细胞突变数量,并量化为每兆碱基突变(mut/Mb)。该指标可用于对患者进行分层,例如以预测或监测对根据本发明的抗体或缀合物治疗的响应。存在并可使用FDA批准的测试,例如参考值≥10mut/Mb。或者,微卫星不稳定性(MSI)可用于分层,这是由DNA错配修复系统故障引起的。According to some embodiments A2 of the fourth embodiment of aspect 22, this use includes determining tumor mutational burden to predict and monitor tumor response. Tumor mutational burden (TMB) is a biomarker used to measure the number of somatic mutations present in a cancer patient's tumor and quantifies it as megabase mutations per 1,000 bases (mut/Mb). This indicator can be used to stratify patients, for example, to predict or monitor response to treatment with an antibody or conjugate according to the invention. An FDA-approved test is present and can be used, for example, a reference value ≥10 mut/Mb. Alternatively, microsatellite instability (MSI), which is caused by a failure of the DNA mismatch repair system, can be used for stratification.
根据第22方面的第四实施方式的一些实施方式A3,该用途包括确定癌症分期以预测和监测肿瘤响应。可以如本领域已知的那样进行癌症分期,例如使用TNM分类系统或FIGO分期,并可用于对患者进行分层,例如以预测或监测对本发明的抗体或缀合物治疗的响应。According to some embodiments A3 of the fourth embodiment of aspect 22, this use includes determining cancer staging to predict and monitor tumor response. Cancer staging can be performed as is known in the art, for example using the TNM classification system or FIGO staging, and can be used to stratify patients, for example to predict or monitor response to antibody or conjugate treatment of the present invention.
根据根据第22方面的第四实施方式的一些实施方式A4,该用途包括确定干扰素或干扰素刺激的基因或蛋白质的存在、水平或激活以用于预测和监测肿瘤响应。干扰素刺激基因是其表达受干扰素,特别是IFNg刺激的基因。合适的干扰素刺激基因或蛋白质包括但不限于ACOD1,ACTG1,ACTR2,ACTR3,ADAMTS13,AIF1,AQP4,ASS1,B2M,BST2,C9JQL5,CALCOCO2,CAMK2A,CAMK2B,CAMK2D,CAMK2G,CASP1,CCL1,CCL11,CCL13,CCL14,CCL15,CCL15,CCL14,CCL16,CCL17,CCL18,CCL19,CCL2,CCL20,CCL21,CCL22,CCL23,CCL24,CCL25,CCL26,CCL3,CCL3L1,CCL4,CCL4L1,CCL5,CCL7,CCL8,CD40,CD44,CD58,CDC42EP2,CDC42EP4,CIITA,CITED1,CLDN1,CX3CL1,CXCL16,CYP27B1DAPK1,DAPK3,EDN1,EPRS,EVL,FCGR1A,FCGR1B,FLNB,GAPDH,GBP1,GBP2,GBP4,GBP5,GBP6,GCH1,GSN,HCK,HLA-A,HLA-B,HLA-C,HLA-DPA1,HLA-DPB1,HLA-DQA1,HLA-DQA2,HLA-DQB1,HLA-DQB2,HLA-DRAHLA-DRB1,HLA-DRB3,HLA-DRB4,HLA-DRB5,HLA-E,HLA-F,HLA-G,HLA-H,ICAM1,IFI30,IFITM1,IFITM2,IFITM3,IFNG,IFNGR1,IFNGR2,IL12B,IL12RB1IL23R,IRF1,IRF2,IRF3,IRF4,IRF5,IRF6,IRF7,IRF8,IRF9,JAK1,JAK2,KIF16B,KIF5B,KYNU,LGALS9,MEFV,MID1,MRC1,MT2A,MYO1C,NCAM1,NMI,NOS2,NUB1,OAS1,OAS2,OAS3,OASL,PDE12,PML,PRKCD,PTAFR,RAB12,RAB20,RAB43,RAB7B,RPL13A,RPS6KB1RYDEN,SEC61A1SLC11A1SLC26A6SLC30A8 SNCA,SP100,STAR,STAT1,STX4,STX8,STXBP1,STXBP2,STXBP3,STXBP4,SYNCRIPTDGF1,TLR2,TLR3,TLR4,TRIM21,TRIM22,TRIM25,TRIM26,TRIM31,TRIM34,TRIM38,TRIM5,TRIM62,TRIM68,TRIM8,UBD,VAMP3,VCAM1,VIM,VPS26B,WAS,WNT5A,XCL1,XCL2,ZYX。According to some embodiments A4 of the fourth embodiment of aspect 22, this use includes determining the presence, level, or activation of interferon or interferon-stimulated genes or proteins for the purpose of predicting and monitoring tumor responses. Interferon-stimulated genes are genes whose expression is stimulated by interferon, particularly IFNg. Suitable interferon-stimulated genes or proteins include, but are not limited to, ACOD1, ACTG1, ACTR2, ACTR3, ADAMTS13, AIF1, AQP4, ASS1, B2M, BST2, C9JQL5, CALCOCO2, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CASP1, CCL1, CCL11, CCL13, CCL14, CCL15, CCL15, CCL14, CCL16, CCL17, CCL18, CCL19, CCL2, CCL20, CCL21, CCL22, CCL23, CCL24, CCL25, CCL26, CCL3, CCL3L1, CCL4, CCL4L1, CCL5, CCL7, CCL 8. CD40, CD44, CD58, CDC42EP2, CDC42EP4, CIITA, CITED1, CLDN1, CX3CL1, CXCL16, CYP27B1DAPK1, DAPK3, EDN1, EPRS, EVL, FCGR1A, FCGR1B, FLNB, GAPDH, GBP1, GBP2, GB P4, GBP5, GBP6, GCH1, GSN, HCK, HLA-A, HLA-B, HLA-C, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRAHLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DR B5, HLA-E, HLA-F, HLA-G, HLA-H, ICAM1, IFI30, IFITM1, IFITM2, IFITM3, IFNG, IFNGR1, IFNGR2, IL12B, IL12RB1IL23R, IRF1, IRF2, IRF3, IRF4, IRF5, IRF6, IRF7, IRF8, IRF9, JAK1, JAK2, KIF16B, KIF5B, KYNU, LGALS9, MEFV, MID1, MRC1, MT2A, MYO1C, NCAM1, NMI, NOS2, NUB1, OAS1, OAS2, OAS3, OASL, PDE12, PML, PRKCD, PTAFR, RAB12, RAB2 0, RAB43, RAB7B, RPL13A, RPS6KB1RYDEN, SEC61A1SLC11A1SLC26A6SLC30A8 SNCA, SP100, STAR, STAT1, STX4, STX8, STXBP1, STXBP2, STXBP3, STXBP4, SYNCRIPTDGF1, TL R2, TLR3, TLR4, TRIM21, TRIM22, TRIM25, TRIM26, TRIM31, TRIM34, TRIM38, TRIM5, TRIM62, TRIM68, TRIM8, UBD, VAMP3, VCAM1, VIM, VPS26B, WAS, WNT5A, XCL1, XCL2, ZYX.
根据第22方面的第四实施方式的一些实施方式A5,该用途包括确定CCR8表达用于预测和监测肿瘤响应。可以确定CCR8表达水平,例如基于活检样本,如本领域已知的,例如使用基于IHC、PCR或ELISA的方法,例如使用本文公开的抗体、片段或缀合物。According to some embodiments A5 of the fourth embodiment of aspect 22, this use includes determining CCR8 expression for predicting and monitoring tumor response. CCR8 expression levels can be determined, for example, based on biopsy samples, as known in the art, such as using IHC, PCR, or ELISA-based methods, such as using antibodies, fragments, or conjugates disclosed herein.
根据第22方面的第四实施方式的一些实施方式A6,该用途包括测定选自(a)补体因子蛋白、(b)丝氨酸蛋白酶抑制剂、(c)MHC组分或(d)Arg2或(e)本文公开的另一种生物标志物的基因或蛋白的存在、水平或激活(参见例如实施例12.7.1或12.7.2)用于预测和监测肿瘤响应。合适的补体因子蛋白包括但不限于C1R、C1S、C4A、C5ar2、F12和MASP2,或它们用于治疗的来自各个物种的类似物。合适的丝氨酸蛋白酶抑制蛋白包括但不限于Serpina1a、Serpina1b、Serpina1d、Serpina3i或它们来自其他物种的类似物。合适的MHC组分包括但不限于H2-K2、H2-T24、H2-Q10、H2-B1、H2-Q1、H2-Q5和H2-DMb2,或它们来自其他物种的类似物。According to some embodiments A6 of the fourth embodiment of aspect 22, the use includes determining the presence, level, or activation of a gene or protein selected from (a) complement factor proteins, (b) serine protease inhibitors, (c) MHC components, or (d) Arg2, or (e) another biomarker disclosed herein (see, for example, Examples 12.7.1 or 12.7.2) for predicting and monitoring tumor response. Suitable complement factor proteins include, but are not limited to, C1R, C1S, C4A, C5ar2, F12, and MASP2, or their analogues from various species for therapeutic purposes. Suitable serine protease inhibitors include, but are not limited to, Serpina1a, Serpina1b, Serpina1d, Serpina3i, or their analogues from other species. Suitable MHC components include, but are not limited to, H2-K2, H2-T24, H2-Q10, H2-B1, H2-Q1, H2-Q5, and H2-DMb2, or their analogues from other species.
如实施例12.1.2中所讨论的,发明人基于来自同基因小鼠模型的早期肿瘤的全基因组RNA-seq数据发现,以下基因水平的增加与肿瘤响应密切相关:Eif3j2,Eno1b,Ifi44l,Hist1h2al,Ifi202b,Hmga1b,Amd2,Sycp1,Itln1,Trim34b,Catsperg2,Zfp868,Serpina1b,Prss41,C1rb,Cyld,Ccnblipl,Masp2,Acaa1b,C4a,Snord93,Abhd1,Serpina3h,H2-K2,Cd1d2,Hal,Rnf151,Rbm46,Arg2,Mir8099-2,Igsf21,Olfr373,C1s2,Crym,Arvl,Hddc3,Plppr4,Ppplr11,Rps3a2,Zfp459,Rnd1,Serpinala,Vcpkmt,Atp10d,Gbp2b,H2-T24,Tlcd2,Ctse,H2-Q10,Cyp2c55,Borcs8,Tpsab1,Trim43b,Cc2d1a,Serpina1d,Cacna1a,Kcnj14,Ttc13,Farsa,Olfr1217,Jaml,H2-Bl,Tnpo2,Rims3,Dock9,Car5b,Atpla4,H2-Q1,Zfp69,Slpi,Pcdhgb8,Ocell,Selenbp2,Nsd3,Wt1,Nap112,Ranbp9,Gtpbp3,AY761185,Rnaset2a,Serpina3i,El12,Gal3st2b,Urb2,F12,Klk1,Ifi214,Cstl1,Agtpbp1,Msh5,Cox18,Zfp330,Ttc37,Klk4,H2-Q5,Cxcl11,Rab39,Pm20d1,Nod2,H2-DMb2。有趣的是,该集合高度富集了早期补体因子、补体调节因子(如丝氨酸蛋白酶抑制剂)和MHC组分。特别是,高水平补体C1/C4的存在可能有助于Treg裂解。当补体因子的耗竭/消耗降低Treg耗竭的功效时,补充补体系统,例如在联合治疗中可能是一种选择。As discussed in Example 12.1.2, the inventors, based on genome-wide RNA-seq data from early-stage tumors in syngeneic mouse models, found that increased levels of the following genes were closely associated with tumor response: Eif3j2, Eno1b, Ifi44l, Hist1h2al, Ifi202b, Hmga1b, Amd2, Sycp1, Itln1, Trim34b, Catsperg2, Zfp868, Serpina1b, Prss41, C1rb, Cyld, C cnblipl, Masp2, Acaa1b, C4a, Snord93, Abhd1, Serpina3h, H2-K2, Cd1d2, Hal, Rnf151, Rbm46, Arg2, Mir8099-2, Igsf21, Olfr373, C1s2, Crym, Arvl, Hddc3, Plppr4, Ppplr11, Rps3a2, Zfp459, Rnd1, Serpinala, Vcpkmt, Atp10d , Gbp2b, H2-T24, Tlcd2, Ctse, H2-Q10, Cyp2c55, Borcs8, Tpsab1, Trim43b, Cc2d1a, Serpina1d, Cacna1a, Kcnj14 , Ttc13, Farsa, Olfr1217, Jaml, H2-Bl, Tnpo2, Rims3, Dock9, Car5b, Atpla4, H2-Q1, Zfp69, Slpi, Pcdhgb8, Ocel The list includes: l, Selenbp2, Nsd3, Wt1, Nap112, Ranbp9, Gtpbp3, AY761185, Rnaset2a, Serpina3i, El12, Gal3st2b, Urb2, F12, Klk1, Ifi214, Cstl1, Agptpbp1, Msh5, Cox18, Zfp330, Ttc37, Klk4, H2-Q5, Cxcl11, Rab39, Pm20d1, Nod2, and H2-DMb2. Interestingly, this set is highly enriched for early complement factors, complement regulators (such as serine protease inhibitors), and MHC components. In particular, the presence of high levels of complement C1/C4 may contribute to Treg cleavage. When complement factor depletion/consumption reduces the efficacy of Treg depletion, complement system supplementation, such as in combination therapy, may be an option.
根据第22方面的第四实施方式的一些优选的实施方式,该用途包括测定选自Eif3j2,Eno1b,Ifi441,Hist1h2a1,Ifi202b,Hmga1b,Amd2,Sycp1,Itln1,Trim34b,Catsperg2,Zfp868,Serpinalb,Prss41,C1rb,Cyld,Ccnblip1,Masp2,Acaa1b,C4a,Snord93,Abhd1,Serpina3h,H2-K2,Cd1d2,Hal,Rnf151,Rbm46,Arg2,Mir8099-2,Igsf21,Olfr373,C1s2,Crym,Arv1,Hddc3,Plppr4,Ppp1rl1,Rps3a2,Zfp459,Rnd1,Serpina1a,Vcpkmt,Atp10d,Gbp2b,H2-T24,Tlcd2,Ctse,H2-Q10,Cyp2c55,Borcs8,Tpsab1,Trim43b,Cc2d1a,Serpina1d,Cacnala,Kcnj14,Ttc13,Farsa,Olfr1217,Jaml,H2-B1,Tnpo2,Rims3,Dock9,Car5b,Atp1a4,H2-Q1,Zfp69,Slpi,Pcdhgb8,Ocel1,Selenb2,Nsd3,Wt1,Nap112,Ranbp9,Gtpbp3,AY761185,Rnaset2a,Serpina3i,Ell2,Gal3st2b,Urb2,F12,Klk1,Ifi214,Cstl1,Agtpbp1,Msh5,Cox18,Zfp330,Ttc37,Klk4,H2-Q5,Cxc111,Rab39,Pm20d1,Nod2,H2-DMb2或其任何组合的基因或蛋白质的存在、水平或激活用于预测和监测肿瘤响应。如本领域技术人员立即理解的,对于人类受试者,分层、预测或监测方法包括确定所提供基因或蛋白的人类对应物的存在、水平或激活。According to some preferred embodiments of the fourth embodiment of aspect 22, the use includes determining the presence of a protein selected from Eif3j2, Eno1b, Ifi441, Hist1h2a1, Ifi202b, Hmga1b, Amd2, Sycp1, Itln1, Trim34b, Catsperg2, Zfp868, Serpinalb, Prss41, C1rb, Cyld, Ccnblip1, Massp2, Acaa1b, C4a, Snord93, Ab hd1, Serpina3h, H2-K2, Cd1d2, Hal, Rnf151, Rbm46, Arg2, Mir8099-2, Igsf21, Olfr373, C1s2, Crym, Arv1, Hddc 3. Plppr4, Ppp1rl1, Rps3a2, Zfp459, Rnd1, Serpina1a, Vcpkmt, Atp10d, Gbp2b, H2-T24, Tlcd2, Ctse, H2-Q10, Cy p2c55, Borcs8, Tpsab1, Trim43b, Cc2d1a, Serpina1d, Cacnala, Kcnj14, Ttc13, Farsa, Olfr1217, Jaml, H2-B1, Tnpo2, Rims3, Dock9, Car5b, Atp1a4, H2-Q1, Zfp69, Slpi, Pcdhgb8, Ocel1, Selenb2, Nsd3, Wt1, Nap112, Ranbp9, The presence, level, or activation of genes or proteins such as Gtpbp3, AY761185, Rnaset2a, Serpina3i, Ell2, Gal3st2b, Urb2, F12, Klk1, Ifi214, Cstl1, Agptpbp1, Msh5, Cox18, Zfp330, Ttc37, Klk4, H2-Q5, Cxc111, Rab39, Pm20d1, Nod2, H2-DMb2, or any combination thereof are used to predict and monitor tumor responses. As will be immediately understood by those skilled in the art, for human subjects, stratification, prediction, or monitoring methods include determining the presence, level, or activation of human counterparts of the provided genes or proteins.
根据第22方面的第四实施方式的一些实施方式A7,该用途包括确定炎性或抑制性细胞因子的存在或数量以预测和监测肿瘤响应。炎性或抑制性细胞因子的存在或数量的评估可以如本领域已知的那样进行。According to some embodiments A7 of the fourth embodiment of aspect 22, this use includes determining the presence or quantity of inflammatory or inhibitory cytokines to predict and monitor tumor response. The assessment of the presence or quantity of inflammatory or inhibitory cytokines can be performed as is known in the art.
根据第22方面的第四实施方式的一些实施方式A8,该用途包括基于免疫基因表达的激活来预测或监测肿瘤响应。可以使用本领域已知的方法测量免疫基因表达的激活,例如使用基因集富集分析或使用本领域已知的基于标志物的测定。此外,分层、预测或监测可基于激活的Treg或免疫细胞的基因签名特征发生。According to some embodiments A8 of the fourth embodiment of aspect 22, this use includes predicting or monitoring tumor response based on the activation of immune gene expression. The activation of immune gene expression can be measured using methods known in the art, such as gene set enrichment analysis or biomarker-based assays known in the art. Furthermore, stratification, prediction, or monitoring can occur based on the gene signature characteristics of activated Tregs or immune cells.
根据第22方面的第四实施方式的一些高度优选的实施方式A9,该用途包括对一组受试者或患者进行分层以基于免疫检查点蛋白表达预测肿瘤响应,例如PD-L1表达、PD-1表达或CTLA4表达,或用途包括确定免疫检查点蛋白表达水平,例如PD-L1表达、PD-1表达或CTLA4表达,以预测和监测肿瘤响应。According to some highly preferred embodiments A9 of the fourth embodiment of aspect 22, the use includes stratifying a group of subjects or patients to predict tumor response based on the expression of immune checkpoint proteins, such as PD-L1 expression, PD-1 expression, or CTLA4 expression, or the use includes determining the expression level of immune checkpoint proteins, such as PD-L1 expression, PD-1 expression, or CTLA4 expression, to predict and monitor tumor response.
程序性死亡配体1(PD-L1)是一种免疫相关生物标志物,其可以在包括肿瘤细胞在内的许多组织类型的表面上表达。PD-L1蛋白表达可以通过使用肿瘤比例评分(TPS)或联合阳性评分(CPS)来确定。根据本发明,出人意料地发现,对于具有ICI响应性肿瘤特别是具有(高)PD-L1表达的肿瘤的受试者,对使用抗CCR8抗体的(单一)疗法的响应得到改善(参见实施例12.7)。根据这一观察结果,发明人发现FoxP3+Treg细胞浸润同样与高PD-L1表达相关。因此,发明人建议将PD-L1作为分层的替代标志物,以克服CCR8难以分析并因此不能轻易用于选择最有可能受益于抗CCR8抗体治疗的受试者群体的问题。在特别优选的实施方式中,PD-L1表达是基于CPS或TPS确定的。如果PD-L1表达存在或高,例如如CPS≥1,优选地CPS≥5,最优选地CPS≥10所示,或如TPS≥1%,优选地TPS≥10%,最优选地TPS≥50%所示,受试者或患者被确定为适合用抗CCR8抗体治疗。Programmed death-ligand 1 (PD-L1) is an immune-related biomarker that can be expressed on the surface of many tissue types, including tumor cells. PD-L1 protein expression can be determined using tumor proportion score (TPS) or combined positive score (CPS). According to the invention, it was unexpectedly found that subjects with ICI-responsive tumors, particularly those with (high) PD-L1 expression, showed improved response to (mono) therapy with anti-CCR8 antibodies (see Example 12.7). Based on this observation, the inventors found that FoxP3+Treg cell infiltration was also associated with high PD-L1 expression. Therefore, the inventors propose using PD-L1 as an alternative marker for stratification to overcome the problem that CCR8 is difficult to analyze and therefore cannot be easily used to select subject populations most likely to benefit from anti-CCR8 antibody therapy. In a particularly preferred embodiment, PD-L1 expression is determined based on CPS or TPS. If PD-L1 expression is present or high, for example, as shown by CPS≥1, preferably CPS≥5, most preferably CPS≥10, or as shown by TPS≥1%, preferably TPS≥10%, most preferably TPS≥50%, the subject or patient is determined to be suitable for treatment with anti-CCR8 antibody.
方面23-进一步和诊断用途Aspect 23 - Further and Diagnostic Uses
本文所述的抗趋化因子受体或抗CCR8抗体、片段和缀合物可用于多种目的,例如帮助纯化或固定趋化因子受体或CCR8表达细胞,例如激活的或肿瘤内的Tregs,用于体外、体内和离体应用或诊断。作为具体实例,抗体可用于定性和/或定量测量生物样品中趋化因子受体或趋化因子受体表达细胞水平的免疫测定,参见,例如Harlow et al.,Antibodies:A Laboratory Manual,Second Edition(Cold Spring Harbor Laboratory Press,1988)。The anti-chemokine receptor or anti-CCR8 antibodies, fragments, and conjugates described herein can be used for a variety of purposes, such as aiding in the purification or immobilization of chemokine receptor or CCR8-expressing cells, such as activated or intratumoral Tregs, for in vitro, in vivo, and ex vivo applications or diagnostics. As a specific example, antibodies can be used for immunoassays to qualitatively and/or quantitatively measure the levels of chemokine receptors or chemokine receptor-expressing cells in biological samples; see, for example, Harlow et al., Antibodies: A Laboratory Manual, Second Edition (Cold Spring Harbor Laboratory Press, 1988).
例如,抗趋化因子受体抗体、抗CCR8抗体或其抗原结合片段可用于检测表达趋化因子受体或CCR8的肿瘤的存在。可以分析各种生物样本(包括血清和组织活检样本)中趋化因子受体或CCR8表达细胞或脱落趋化因子受体或CCR8的存在或水平。此外,抗趋化因子受体或抗CCR8抗体可用于各种成像方法,例如使用99Tc(或不同同位素)缀合抗体的免疫闪烁显像术。例如,与描述的使用111In缀合抗PSMA抗体的成像方案类似的成像方案可用于检测癌症(Sodee,D.Bruce,et al.″Preliminary Imaging Results Using In-111LabeledCYT-356(Prostascintst)in the Detection of Recurrent ProstateCancer.″Clinicalnuclear medicine 21.10(1996):759-767.)。可以使用的另一种检测方法是正电子发射断层扫描,例如通过将本发明的抗体与合适的同位素缀合(参见Herzog,Hans,et al.″Measurement of pharmacokinetics of yttrium-86radiopharmaceuticals with PETand radiation dose calculation of analogous yttrium-90radiotherapeutics.″Journal ofNuclear Medicine 34.12(1993):2222-2226)。For example, anti-chemokine receptor antibodies, anti-CCR8 antibodies, or their antigen-binding fragments can be used to detect the presence of tumors expressing chemokine receptors or CCR8. The presence or level of chemokine receptor or CCR8-expressing cells or shed chemokine receptors or CCR8 can be analyzed in various biological samples (including serum and tissue biopsy samples). Furthermore, anti-chemokine receptor or anti-CCR8 antibodies can be used in various imaging methods, such as immunoscintigraphy using 99Tc (or different isotopes) conjugated antibodies. For example, imaging protocols similar to those described using 111In conjugated anti-PSMA antibodies can be used to detect cancer (Sodee, D. Bruce, et al. "Preliminary Imaging Results Using In-111 Labeled CYT-356 (Prostascint) in the Detection of Recurrent Prostate Cancer." Clinical nuclear medicine 21.10 (1996): 759-767.). Another detection method that can be used is positron emission tomography (PET), for example by conjugating the antibody of the present invention with a suitable isotope (see Herzog, Hans, et al. "Measurement of pharmacokinetics of yttrium-86 radiopharmaceuticals with PET and radiation dose calculation of analogous yttrium-90 radiopharmaceuticals." Journal of Nuclear Medicine 34.12 (1993): 2222-2226).
根据第23方面,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面地缀合物或根据第20方面的药物组合物用于诊断应用或诊断。According to aspect 23, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is provided for diagnostic applications or diagnosis.
在第23方面的一些第一实施方式中,提供了根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面地缀合物或根据第20方面的药物组合物用于体内诊断方法。该用途可以是用于诊断以趋化因子受体阳性细胞为特征的肿瘤或疾病的用途,例如CCR8阳性细胞,如CCR8阳性调节性T细胞。例如,以趋化因子受体阳性细胞为特征的肿瘤或疾病选自T细胞急性淋巴细胞白血病、乳腺癌、三阴性乳腺癌、三阳性乳腺癌、非小细胞肺癌(NSCLC)、小细胞肺癌(SCLC)睾丸癌、胃癌、头颈部鳞状细胞癌、胸腺瘤、食管腺癌、结直肠癌、胰腺癌、卵巢癌或宫颈癌、急性髓系白血病、肾癌、膀胱癌、皮肤癌、黑色素瘤、甲状腺癌、间皮瘤、肉瘤和前列腺癌。根据一些优选的实施方式,在体内诊断方法中的用途是在头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌、或本文所述的任何其他肿瘤的诊断中的用途。In some first embodiments of aspect 23, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is provided for use in in vivo diagnostic methods. This use may be for diagnosing tumors or diseases characterized by chemokine receptor-positive cells, such as CCR8-positive cells, like CCR8-positive regulatory T cells. For example, tumors or diseases characterized by chemokine receptor-positive cells are selected from T-cell acute lymphoblastic leukemia, breast cancer, triple-negative breast cancer, triple-positive breast cancer, non-small cell lung cancer (NSCLC), small cell lung cancer (SCLC), testicular cancer, gastric cancer, head and neck squamous cell carcinoma, thymoma, esophageal adenocarcinoma, colorectal cancer, pancreatic cancer, ovarian cancer or cervical cancer, acute myeloid leukemia, kidney cancer, bladder cancer, skin cancer, melanoma, thyroid cancer, mesothelioma, sarcoma, and prostate cancer. According to some preferred embodiments, the use in in vivo diagnostic methods is for the diagnosis of head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumors, melanoma, bladder cancer, liver cancer and/or prostate cancer, or any other tumors described herein.
根据一些优选的实施方式,根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段,或根据第19方面地缀合物或根据第20方面的药物组合物用于治疗受试者或患者的分层,例如用于治疗本文所述的疾病。According to some preferred embodiments, an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, is used to treat a subject or patient stratification, for example, for treating the disease described herein.
方面24-CCR8抗体的DNA/RNADNA/RNA of 24-CCR8 antibody
根据第24方面,提供了编码根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段的多核苷酸。优选地,根据该方面的多核苷酸是根据序列表提供的多核苷酸。According to aspect 24, a polynucleotide encoding an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18 is provided. Preferably, the polynucleotide according to this aspect is a polynucleotide provided in the sequence listing.
方面25-抗体载体Aspect 25 - Antibody Vector
根据第25方面,提供了包含根据第24方面的多核苷酸的载体。各种合适的载体系统是本领域已知的或本文描述的。According to aspect 25, a vector comprising the polynucleotide according to aspect 24 is provided. Various suitable vector systems are known in the art or described herein.
方面26-抗体的生产细胞Aspect 26 - Antibody Production Cells
根据第26方面,提供了一种分离的细胞,其被安排用于产生根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段。优选地,根据当前方面的分离细胞是真核细胞,例如包含根据第25方面的载体的CHO或HEK细胞。在另一个优选的实施方式中,细胞是大鼠骨髓瘤YB2/0细胞。According to aspect 26, an isolated cell is provided, which is arranged to produce an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18. Preferably, the isolated cell according to the present aspect is a eukaryotic cell, such as CHO or HEK cells containing a vector according to aspect 25. In another preferred embodiment, the cell is a rat myeloma YB2/0 cell.
方面27-抗体的生产方法Aspect 27 - Antibody Production Methods
根据第27方面,提供了一种产生根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段或根据第19方面的缀合物的方法,包括培养根据第26方面的细胞和任选地纯化抗体或抗原结合片段。在一些高度优选的实施方式中,该方法包括抗体的非岩藻糖基化,如本文别处所述在一些实施方式中,该方法包括抗体的纯化。According to aspect 27, a method is provided for producing an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, comprising culturing cells according to aspect 26 and optionally purifying the antibody or antigen-binding fragment. In some highly preferred embodiments, the method includes defucosylation of the antibody, as described elsewhere herein; in some embodiments, the method includes purification of the antibody.
例如,本发明的抗体可以通过下述纯化方法进行纯化。所描述的纯化过程适用于范围广泛的单克隆IgG抗体,并针对高达8g/L的生物反应器滴度进行了优化,预期收获体积为来自一次性或不锈钢生物反应器的2000L。通过适当的修饰,可以处理具有其他滴度范围的抗体培养物。通过深度过滤和/或带电过滤收集和澄清细胞培养物。澄清后的收获物储存在一次性袋中或可选的冷却的不锈钢储罐中。For example, the antibodies of the present invention can be purified by the purification method described below. The described purification process is applicable to a wide range of monoclonal IgG antibodies and is optimized for bioreactor titers up to 8 g/L, with a anticipated harvest volume of 2000 L from a disposable or stainless steel bioreactor. Antibody cultures with other titer ranges can be processed with appropriate modifications. Cell cultures are collected and clarified by depth filtration and/or electrofiltration. The clarified harvest is stored in disposable bags or, optionally, in a cooled stainless steel tank.
一般工艺条件General process conditions
优选封闭式处理和一次性系统;通过适当的清洁和转换程序,不锈钢滑道或系统也是可能的。一次性袋子通常采用低密度或超低密度聚乙烯作为接触层。除其他外,可以使用乙酸钠/乙酸或Tris/Tris-HCl缓冲系统,通常总浓度为50mM,包括50mM NaCl,除非另有说明。各个单元操作(例如上样、洗脱或流穿)的缓冲液和过程中间体通常经过0.2μm在线过滤或使用过滤组件,例如使用PES膜和/或羊毛过滤器。这些溶液通常在环境温度(例如18-26℃)或2-8℃条件下储存在一次性袋或不锈钢容器中。Closed-loop processing and single-use systems are preferred; stainless steel chutes or systems are also possible with appropriate cleaning and conversion procedures. Single-use bags typically use low-density or ultra-low-density polyethylene as the contact layer. Sodium acetate/acetic acid or Tris/Tris-HCl buffer systems may be used, among others, typically with a total concentration of 50 mM, including 50 mM NaCl, unless otherwise specified. Buffers and intermediates for individual unit operations (e.g., loading, elution, or flow-through) are typically filtered in-line at 0.2 μm or using filter assemblies such as PES membranes and/or wool filters. These solutions are typically stored in single-use bags or stainless steel containers at ambient temperature (e.g., 18–26 °C) or 2–8 °C.
捕获capture
使用基于蛋白A的色谱法进行抗体捕获,例如利用Cytiva MabSelect SuRe、MabSelect SuRe LX、Mab Select PrismA或Purolite A50树脂。在有或没有通过超滤预浓缩的情况下,在澄清后进行加载。加载密度通常为45-75g/L,使用单一或可变流速将澄清的收获物应用到柱子上(120-400厘米/小时)。层析可以使用一根或多根柱以批处理模式进行,也可以使用最多8根柱以连续(MCC(多柱层析)/SMB(模拟移动床))模式进行。对于批处理模式,预装柱或自装柱的典型床高为20cm。对于连续模式,目标是澄清收获物与树脂的接触时间为1-4分钟。根据抗体滴度,捕获在一个或多个循环中进行。在加载之前,使用Tris缓冲液(例如pH 7)平衡色谱柱;洗涤以至少两个洗涤步骤进行;在醋酸盐缓冲液中第一洗涤缓冲液中的NaCl浓度高,然后第二缓冲液中的NaCl浓度低(例如第一次洗涤:1M NaCl,pH5.5;第二次洗涤:50mM NaCl,βH 6.0)。例如,洗脱可以通过含有0-50mM NaCl的低pH(例如3.5)醋酸盐缓冲液实现,通常≤5个柱体积(CV),并使用UV或体积控制洗脱液收集。洗脱液可以在这一步或病毒灭活后汇集并充分混合。亲和柱通过≥3CV乙酸(例如0.1M,包括500mMNaCl)再生,使用0.5-1.0M NaOH进行消毒(就地清洗,CIP)30分钟,使用≥4CV重新平衡。该柱存储在例如20%EtOH或2%BnOH。Antibody capture is performed using protein A-based chromatography, such as with Cytiva MabSelect SuRe, MabSelect SuRe LX, Mab Select PrismA, or Purolite A50 resin. Loading is performed after clarification, with or without pre-concentration via ultrafiltration. Loading densities are typically 45–75 g/L, and the clarified harvest is applied to the column using a single or variable flow rate (120–400 cm/h). Chromatography can be performed in batch mode using one or more columns, or in continuous (MCC/SMB) mode using up to eight columns. For batch mode, the typical bed height is 20 cm for pre-packed or self-packed columns. For continuous mode, the target contact time between the clarified harvest and the resin is 1–4 minutes. Depending on the antibody titer, capture is performed in one or more cycles. Before loading, equilibrate the column with Tris buffer (e.g., pH 7); washing is performed in at least two wash steps; the first wash buffer has a high NaCl concentration in acetate buffer, followed by a second wash buffer with a low NaCl concentration (e.g., first wash: 1M NaCl, pH 5.5; second wash: 50mM NaCl, βH 6.0). Elution can be achieved, for example, with a low pH (e.g., 3.5) acetate buffer containing 0–50mM NaCl, typically ≤5 column volumes (CV), and eluent collection can be performed using UV or volume control. The eluent can be pooled and thoroughly mixed at this step or after virus inactivation. The affinity column is regenerated with ≥3CV of acetic acid (e.g., 0.1M, including 500mM NaCl), sterilized with 0.5–1.0M NaOH (wash in place, CIP) for 30 minutes, and reequilibrated with ≥4CV. The column is stored, for example, in 20% EtOH or 2% BnOH.
或者,可以使用与上述相同的加载方案和缓冲系统,在纤维素结构(例如FibroPrismA)上使用亲和配体从澄清的收获物中进行亲和捕获。可以跳过再生或CIP块以获得最佳处理时间。5-20秒的接触时间可应用于不同尺寸的Fibro装置(例如0.4mL至2.4L)。通常,可以实现25-35g/L单位体积的负载能力。单个单元可用于处理单个批次或多个批次,具体取决于Fibro单元和生物反应器的大小以及抗体培养物的滴度。亲和负载材料可以在负载前以>300L/m2的吞吐量通过带电过滤器进一步澄清,以最大限度地延长使用寿命并最大限度地减少污染。Alternatively, affinity capture from clarified harvest can be performed using affinity ligands on cellulose structures (e.g., FibroPrismA) using the same loading scheme and buffering system described above. Regeneration or CIP blocks can be skipped to achieve optimal processing time. Contact times of 5–20 seconds are applicable to various sizes of Fibro units (e.g., 0.4 mL to 2.4 L). Typically, loading capacities of 25–35 g/L per unit volume can be achieved. A single unit can be used to process a single batch or multiple batches, depending on the size of the Fibro unit and bioreactor, as well as the titer of the antibody culture. Affinity-loaded material can be further clarified before loading through an electrostatic filter at a throughput of >300 L/m² to maximize usability and minimize contamination.
低pH病毒灭活Low pH virus inactivation
捕获洗脱液用HOAc或HCl调节至pH值3.7-3.9,并在≥18℃的相同或单独袋中保持120-240分钟,以灭活可能存在的病毒。或者,病毒灭活在pH 3.4-3.6下进行>30分钟。然后将工艺中间体调整至储存或进一步加工条件,例如使用1-2M Tris/-HCl滴定剂储备液调节至pH 4-7。The capture eluent is adjusted to pH 3.7–3.9 with HOAc or HCl and incubated at ≥18°C in the same or separate bags for 120–240 minutes to inactivate any present viruses. Alternatively, virus inactivation is performed at pH 3.4–3.6 for >30 minutes. The process intermediate is then adjusted to storage or further processing conditions, for example, by adjusting to pH 4–7 using a 1–2M Tris/-HCl titrant stock solution.
精制(polishing)1Polishing 1
抗体通过阴离子交换层析(AEX)进一步精制,通常采用膜囊或膜盒(例如Sartorius Sartobind STIC PA 4mm或3M MA ST Polisher)的流通模式,流速≤350MV/h,用于去除工艺相关和/或产品相关的杂质和颗粒。根据抗体的量,可以在一个或多个循环中处理来自一批的全部量。在加载之前,将中间体调整到目标电导率,例如8-20mS/cm,以及目标pH值,例如对于具有基本等电点的抗体为7.0。对于等电点低于pH 7.0的抗体,电导率可以为5-20mS/cm,pH可以在其等电点和pH 5.0之间。膜用Tris缓冲液pH 7.0或乙酸盐缓冲液pH 5-6平衡、装载密度一般在0.5-10g抗体/mL膜体积(MV)之间。可以执行具有平衡缓冲液的洗(chase)并与收集的流出物组合,其收集标准由例如紫外线或体积控制。膜吸附器可以使用一次或多次,为此它被再生(对于25MV,1M NaCl)并重新平衡(Tris缓冲液pH 7.0)。The antibody is further purified by anion exchange chromatography (AEX), typically using a membrane capsule or cartridge (e.g., Sartorius Sartobind STIC PA 4mm or 3M MA ST Polisher) at a flow rate ≤350 mV/h, to remove process-related and/or product-related impurities and particles. Depending on the amount of antibody, the entire quantity from a batch can be processed in one or more cycles. Before loading, the intermediate is adjusted to the target conductivity, e.g., 8-20 mS/cm, and the target pH, e.g., 7.0 for antibodies with a basic isoelectric point. For antibodies with an isoelectric point below pH 7.0, the conductivity can be 5-20 mS/cm, and the pH can be between its isoelectric point and pH 5.0. The membrane is equilibrated with Tris buffer pH 7.0 or acetate buffer pH 5-6, and the loading density is generally between 0.5-10 g antibody/mL membrane volume (MV). Washing with equilibration buffer can be performed and combined with the collected effluent, the collection criteria of which are controlled by, for example, ultraviolet light or volume. The membrane adsorber can be used once or multiple times, for which it is regenerated (for 25 mV, 1 M NaCl) and reequilibrated (Tris buffer, pH 7.0).
精制2Refined 2
最终精制可以例如通过阳离子交换层析(CEX)来实现。原则上,AEX和CEX单元操作的顺序可以颠倒。CEX单元操作通常在结合和洗脱模式下进行,流速在100-200cm/h之间。带有树脂的预装柱或自装柱,例如Cytiva Capto S ImpAct或Capto SP ImpRes可在20cm床高下使用。根据抗体的量,改进步骤在一个或多个循环中进行。如果需要,可以使用HOAc、Tris滴定剂或WFI将负载调整到5-9mS/cm之间的目标电导率和pH 4.5-7.5。以40-105g/L之间的典型密度将负载施加到用≥5CV醋酸盐缓冲液(pH和电导率与CEX负载匹配)平衡的CEX柱上,然后使用≥5CV的相同缓冲液进行清洗。使用具有合适NaCl浓度(>50mM;<500mM)的醋酸盐缓冲液洗脱抗体,并通过紫外线控制收集洗脱液,收集的洗脱液体积通常≤10CV。使用0.5-2M NaCl的醋酸盐缓冲液对色谱柱进行再生、重新平衡(≥5CV,使用CEX平衡缓冲液)、消毒(0.5-1.0M NaOH,持续≥30分钟)、重新平衡(≥5CV,使用CEX平衡缓冲液),最后存储在例如20%EtOH或2%BnOH。Final purification can be achieved, for example, by cation exchange chromatography (CEX). In principle, the order of AEX and CEX unit operations can be reversed. CEX unit operations are typically performed in binding and elution mode at flow rates between 100 and 200 cm/h. Pre-packed or self-packed columns with resin, such as Cytiva Capto S ImpAct or Capto SP ImpRes, can be used at a bed height of 20 cm. Depending on the amount of antibody, the purification step is performed in one or more cycles. If necessary, the loading can be adjusted to a target conductivity between 5 and 9 mS/cm and a pH of 4.5–7.5 using HOAc, Tris titrant, or WFI. The loading is applied to a CEX column equilibrated with ≥5 CV acetate buffer (pH and conductivity matched to the CEX loading) at a typical density between 40 and 105 g/L, followed by washing with the same buffer at ≥5 CV. Elute the antibody with acetate buffer containing an appropriate NaCl concentration (>50 mM; <500 mM), and collect the eluent under UV control, with the collected eluent volume typically ≤10 CV. Regenerate the column with 0.5–2 M NaCl acetate buffer, reequilibrate (≥5 CV using CEX equilibration buffer), sterilize (0.5–1.0 M NaOH for ≥30 minutes), reequilibrate (≥5 CV using CEX equilibration buffer), and finally store in, for example, 20% EtOH or 2% BnOH.
另外的精制Other refined
当需要另外的精制以去除残留的产品或工艺相关杂质时,可以使用混合模式色谱(MMC)代替或与CEX步骤一起使用。混合模式色谱树脂的实例是Capto adhere和Capto MMCImpRes。该单元操作通常以流通模式操作,但也可以采用结合-洗脱模式。该色谱柱可以自行填充或预填充,床高为5-20厘米,具有各种直径,并在流穿模式下以100-500厘米/小时的流速运行或以结合-洗脱模式下以100-220厘米/小时的流速运行。When additional purification is required to remove residual product or process-related impurities, mixed-mode chromatography (MMC) can be used instead of or in conjunction with the CEX step. Examples of mixed-mode chromatography resins are Capto adhere and Capto MMC ImRes. This unit operation is typically performed in flow-through mode, but binding-elution mode is also possible. The column can be self-packed or pre-packed, with a bed height of 5–20 cm, various diameters, and is operated at a flow rate of 100–500 cm/h in flow-through mode or 100–220 cm/h in binding-elution mode.
如果需要,通常会使用HOAc、Tris滴定剂或WFI将负载调整到3-12mS/cm之间的目标电导率和4.2-7.5的pH值。负载以75-300g/L之间的典型密度施加到用≥5CV醋酸盐缓冲液(pH和电导率与MMC负载匹配)平衡的MMC柱上。可以执行具有平衡缓冲液的洗(chase)并与收集的流出物组合,其收集标准由例如紫外线或体积控制。MMC柱可以使用一次或多次,具体取决于要精制的抗体量。使用醋酸缓冲液中的0.5-2M NaCl再生柱子,重新平衡(≥5CV,使用平衡缓冲液),消毒(0.5-1.0M NaOH≥30分钟),最后储存在例如20%EtOH或2%BnOH。。If necessary, the loading is typically adjusted to a target conductivity between 3-12 mS/cm and a pH between 4.2-7.5 using HOAc, Tris titrant, or WFI. The loading is applied at a typical density between 75-300 g/L onto an MMC column equilibrated with ≥5 CV acetate buffer (pH and conductivity matched to the MMC loading). Washing with equilibration buffer can be performed and combined with the collected effluent, the collection criteria of which are controlled by, for example, UV or volume. The MMC column can be used once or multiple times, depending on the amount of antibody to be purified. The column is regenerated using 0.5-2 M NaCl in acetate buffer, reequilibrated (≥5 CV, using equilibration buffer), sterilized (0.5-1.0 M NaOH ≥30 min), and finally stored in, for example, 20% EtOH or 2% BnOH.
纳滤nanofiltration
可能残留的外来病毒通过基于PDVF的纳滤去除,例如使用带或不带预过滤器的Planova BioEX。在恒定压力(例如2.0-3.4bar)下以1500-5000g抗体/m2的装载密度将负载施加到预平衡的纳米过滤器(≥5L/m2乙酸盐缓冲液,配方例如与MA AEX或CEX洗脱条件相匹配)。可以使用相同的缓冲液追踪过滤器,并且通常在使用后测试过滤器的完整性。在完整性测试失败时,可以重复此步骤。或者,可以通过带或不带预滤器的基于纤维素的纳滤去除外来病毒。在恒定压力(例如0.8-1.2bar)下以500-2000g抗体/m2的装载密度将负载施加到预平衡的纳米过滤器(≥5L/m2乙酸盐缓冲液,配方例如与MA AEX或CEX洗脱条件相匹配)。Residual foreign viruses may be removed by PDVF-based nanofiltration, such as using Planova BioEX with or without a pre-filter. The load is applied to a pre-equilibrated nanofilter (≥5 L/ m² acetate buffer, formulation matched to MA AEX or CEX elution conditions, for example) at a loading density of 1500–5000 g antibody/ m² under constant pressure (e.g., 2.0–3.4 bar). The filter can be tracked using the same buffer, and the filter integrity is typically tested after use. This step can be repeated if the integrity test fails. Alternatively, foreign viruses can be removed by cellulose-based nanofiltration with or without a pre-filter. The load is applied to a pre-equilibrated nanofilter (≥5 L/ m² acetate buffer, formulation matched to MA AEX or CEX elution conditions, for example) at a loading density of 500–2000 g antibody/ m² under constant pressure (e.g., 0.8–1.2 bar).
浓缩和缓冲液交换Concentration and buffer exchange
中间体通过超滤浓缩至15-110g/L,用≥6渗滤体积对渗滤缓冲液(DFB)(例如10mM组氨酸、10mM蛋氨酸、30mM精氨酸,pH 5.3)进行渗滤,如果需要,进一步浓缩至200g/L。这通常使用切向流过滤装置和截留值为30-50kDa的合适膜(例如Millipore Pellicon、Sartorius Hydrosart、Pall Omega)进行,载量通常为300-1000g抗体/m2。该过程通常由进料或滞留流量(例如2-7L/min/m2)控制,或者由进料压力(2-4bar)和TMP(0.7-2bar)控制。膜可以被DFB洗,并且合并的截留物用DFB稀释至目标浓度。TFF系统和膜用0.5M NaOH消毒,并用醋酸盐缓冲液或DFB平衡。膜完整性或渗透性在使用前进行测试。The intermediate is concentrated to 15-110 g/L by ultrafiltration and percolated with ≥6 percolation volumes of percolation buffer (DFB) (e.g., 10 mM histidine, 10 mM methionine, 30 mM arginine, pH 5.3), further concentrated to 200 g/L if necessary. This is typically performed using a tangential flow filtration system and a suitable membrane with a cutoff of 30-50 kDa (e.g., Millipore Pellicon, Sartorius Hydrosart, Pall Omega), with a loading typically of 300-1000 g antibody/ m² . The process is usually controlled by feed or retention flow rate (e.g., 2-7 L/min/ m² ), or by feed pressure (2-4 bar) and TMP (0.7-2 bar). The membrane can be washed with DFB, and the combined retentates are diluted with DFB to the target concentration. The TFF system and membrane are sterilized with 0.5 M NaOH and equilibrated with acetate buffer or DFB. Membrane integrity or permeability should be tested before use.
稳定Stablize
在可选的稳定化步骤中,添加赋形剂浓缩物以生产原料药(BDS)。生物负载减少过滤(例如0.2μm)是使用例如预平衡过滤器(例如在DFB中稀释的赋形剂浓缩物),在使用后进行完整性测试。在完整性测试失败时,可以重复过滤步骤。In an optional stabilization step, excipient concentrate is added to produce the drug substance (BDS). Bioburden reduction filtration (e.g., 0.2 μm) is performed using, for example, a pre-equilibration filter (e.g., excipient concentrate diluted in DFB), followed by an integrity test after use. If the integrity test fails, the filtration step can be repeated.
填充和冻结Fill and freeze
BDS装在带有LDPE接触层(例如5或10L)的合适袋子中,其带有优选的无菌连接和断开的i.d.采样室。这些袋子通过任选的真空密封(LDPE外包装袋)进行单独保护包装,并放置在保护壳(例如RoS S壳)中。在任选的2-8℃中间储存后,壳袋被冷冻(使用平板或被动冷冻机),随后储存在≤-30或≤-60℃,例如+/-5℃,或者≤-25或≤-60℃,例如+/-5℃。BDS are packaged in suitable bags with an LDPE contact layer (e.g., 5 or 10 L) and preferably aseptically connected and disconnected i.d. sampling chambers. These bags are individually protected by optional vacuum sealing (LDPE outer packaging bag) and placed in a protective shell (e.g., RoS S shell). After storage at an optional intermediate temperature of 2–8 °C, the shell bags are frozen (using a plate or passive freezer) and subsequently stored at ≤-30 or ≤-60 °C, e.g., +/-5 °C, or ≤-25 or ≤-60 °C, e.g., +/-5 °C.
方面28-具有由抗原定义的抗体的试剂盒或部分Section 28 - Kits or portions containing antibodies defined by antigens
根据第28方面,提供了一种试剂盒,其包含根据第6、7、8、9、10、11、12、13、14、15、16、17和/或18方面的抗体或抗原结合片段、或根据第19方面的缀合物或根据第20方面的药物组合物,以及使用说明书。According to aspect 28, a kit is provided comprising an antibody or antigen-binding fragment according to aspects 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17 and/or 18, or a conjugate according to aspect 19, or a pharmaceutical composition according to aspect 20, and instructions for use.
本发明的抗体、片段、缀合物或药物组合物可以在试剂盒中提供,即在一个或多个容器中以预定量包装的试剂组合以及说明书。例如,当抗体、片段或缀合物是治疗性抗体、片段或缀合物时,使用说明可包括包装插页。例如,包装插页可包括描述如本文所述的有利施用模式或组合治疗的信息。The antibodies, fragments, conjugates, or pharmaceutical compositions of the present invention can be provided in a kit, i.e., a combination of reagents packaged in a predetermined amount in one or more containers along with instructions for use. For example, when the antibody, fragment, or conjugate is a therapeutic antibody, fragment, or conjugate, the instructions for use may include a packaging insert. For example, the packaging insert may include information describing advantageous modes of administration or combination therapies as described herein.
例如,当抗体用酶标记时,试剂盒可包括酶所需的底物和辅助因子(例如,提供可检测发色团或荧光团的底物前体)。此外,可以包括其他添加剂,例如稳定剂、缓冲液(例如封闭缓冲液或裂解缓冲液)等。各种试剂的相对量可以广泛变化以提供基本上优化测定的灵敏度的试剂的溶液浓度。特别地,试剂可以作为干粉提供,通常是冻干的,包括在溶解时将提供具有适当浓度的试剂溶液的赋形剂。For example, when antibodies are labeled with enzymes, the kit may include the substrate and cofactors required for the enzyme (e.g., providing a substrate precursor that can detect chromophores or fluorophores). Additionally, other additives may be included, such as stabilizers, buffers (e.g., blocking buffers or lysis buffers), etc. The relative amounts of various reagents can be varied widely to provide reagent solution concentrations that substantially optimize the sensitivity of the assay. In particular, reagents may be provided as dry powders, typically lyophilized, including excipients that provide a reagent solution of appropriate concentration upon dissolution.
方面29-包含抗CCR8抗体的组合疗法Aspect 29 - Combination therapy including anti-CCR8 antibodies
根据一个方面,提供了用于治疗肿瘤的抗CCR8抗体和另外的治疗活性化合物或疗法,其中所述另外的治疗活性化合物是According to one aspect, an anti-CCR8 antibody for treating tumors and a further therapeutically active compound or therapy are provided, wherein said further therapeutically active compound is
a)化疗剂,优选地紫杉烷、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,a) Chemotherapy agents, preferably taxane, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
b)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,b) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
c)靶向肿瘤细胞特异性表达的蛋白的抗体,c) Antibodies that target proteins specifically expressed by tumor cells.
d)靶向HER2和/或EGFR的抗体或小分子,d) Antibodies or small molecules targeting HER2 and/or EGFR,
e)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,e) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
f)靶向激酶抑制剂,例如索拉非尼、瑞戈非尼或MEKi-1,和/或f) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1, and/or
g)放射治疗。g) Radiotherapy.
换而言之,提供了一种抗CCR8抗体,优选地如本文别处所述的诱导ADCC和/或ADCP的抗CCR8抗体,用于治疗肿瘤,其中该用途包括施用不靶向检查点蛋白并选自以下的另外的治疗活性化合物或疗法In other words, an anti-CCR8 antibody, preferably an anti-CCR8 antibody that induces ADCC and/or ADCP as described elsewhere herein, is provided for the treatment of tumors, wherein this use includes administration of non-target checkpoint proteins and of other therapeutically active compounds or therapies selected from the following.
h)化疗剂,优选紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,h) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
i)靶向另外的趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,i) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
j)靶向肿瘤细胞特异性表达的蛋白的抗体,j) Antibodies that target proteins specifically expressed by tumor cells.
k)靶向HER2和/或EGFR的抗体或小分子,k) Antibodies or small molecules targeting HER2 and/or EGFR,
l)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,l) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
m)靶向激酶抑制剂,如索拉非尼、瑞戈非尼或MEKi-1,m) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1,
n)放射治疗,和/或n) Radiation therapy, and/or
o)(化合物或抗体用于)肿瘤内B细胞,优选地CD19+B细胞的耗竭。o)(compound or antibody used for) depletion of tumor B cells, preferably CD19+ B cells.
抗CCR8抗体可以是如本文所述的本发明的抗CCR8抗体或本领域已知的任何其他治疗上合适的抗CCR8抗体。肿瘤可以是本文所述的任何肿瘤,例如针对第22方面。优选地,肿瘤或疾病的特征在于趋化因子受体阳性细胞,例如CCR8阳性细胞,例如CCR8阳性调节性T细胞或CCR8阳性肿瘤细胞。优选地,肿瘤是ICI响应性肿瘤。基于本文描述的实例(例如实施例12.6ff.,参见响应小鼠模型),似乎有道理的是,特别是那些对免疫检查点抑制有响应或最初对免疫检查点抑制有响应的肿瘤将受益于抗CCR8抗体治疗,无论是单独治疗还是组合。另外的治疗活性化合物可以是如本文别处所述的治疗活性化合物。可以选择合适的紫杉烷,例如来自紫杉醇、白蛋白结合型紫杉醇、卡巴他赛或多烯紫杉醇或其衍生物。根据一个优选的实施方式,该用途还包括施用检查点抑制剂,例如抗-PD-1抗体、抗-PD-L1抗体或CTLA4抗体,例如如本文别处所述。The anti-CCR8 antibody may be the anti-CCR8 antibody of the present invention as described herein or any other therapeutically suitable anti-CCR8 antibody known in the art. The tumor may be any tumor described herein, for example, for aspect 22. Preferably, the tumor or disease is characterized by chemokine receptor-positive cells, such as CCR8-positive cells, such as CCR8-positive regulatory T cells or CCR8-positive tumor cells. Preferably, the tumor is an ICI-responsive tumor. Based on the examples described herein (e.g., Example 12.6ff., see responsive mouse model), it seems reasonable that, in particular, tumors that are responsive to or initially responsive to immune checkpoint inhibition will benefit from anti-CCR8 antibody therapy, whether alone or in combination. Additional therapeutically active compounds may be therapeutically active compounds as described elsewhere herein. Suitable taxanes may be selected, such as those derived from paclitaxel, albumin-bound paclitaxel, cabazitaxel, or docetaxel or derivatives thereof. According to a preferred embodiment, this use also includes administration of checkpoint inhibitors, such as anti-PD-1 antibodies, anti-PD-L1 antibodies, or CTLA4 antibodies, as described elsewhere herein.
方面30-包含抗CCR8抗体的三重组合治疗Aspect 30 - Triple combination therapy including anti-CCR8 antibody
根据一个方面,提供了抗CCR8抗体、检查点抑制剂如抗PD-1抗体、抗PD-L1抗体或CTLA4抗体,和另外的治疗活性化合物或疗法用于治疗肿瘤,其中另外的治疗活性化合物或疗法优选地为According to one aspect, anti-CCR8 antibodies, checkpoint inhibitors such as anti-PD-1 antibodies, anti-PD-L1 antibodies, or CTLA4 antibodies, and additional therapeutically active compounds or therapies are provided for treating tumors, wherein the additional therapeutically active compounds or therapies are preferably...
a)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR10、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,a) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
b)靶向肿瘤细胞特异性表达的蛋白的抗体,b) Antibodies that target proteins specifically expressed by tumor cells.
c)靶向HER2和/或EGFR的抗体或小分子,c) Antibodies or small molecules targeting HER2 and/or EGFR,
d)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,d) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
e)化疗剂,优选紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,e) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
f)靶向激酶抑制剂,例如索拉非尼、瑞戈非尼或MEKi-1,和/或f) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1, and/or
g)放射治疗,g) Radiotherapy,
h)(化合物或抗体用于)肿瘤内B细胞,优选地CD19+B细胞的耗竭。h)(compounds or antibodies used for) the depletion of tumor B cells, preferably CD19+ B cells.
换言之,提供了用于治疗肿瘤的诱导ADCC和/或ADCP的抗CCR8抗体,其中该用途包括施用不靶向检查点蛋白并且选自如下的另外的治疗活性化合物或疗法In other words, an anti-CCR8 antibody that induces ADCC and/or ADCP for the treatment of tumors is provided, wherein this use includes administration of a non-target checkpoint protein and selected from other therapeutically active compounds or therapies.
a)化疗剂,优选紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,a) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
b)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CRl或CXCR1,b) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
c)靶向肿瘤细胞特异性表达的蛋白的抗体,c) Antibodies that target proteins specifically expressed by tumor cells.
d)靶向HER2和/或EGFR的抗体或小分子,d) Antibodies or small molecules targeting HER2 and/or EGFR,
e)靶向激酶抑制剂,如索拉非尼、瑞戈非尼或MEKi-1,e) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1,
f)放射治疗,和/或f) Radiation therapy, and/or
耗竭肿瘤内B细胞,优选地CD 19+B细胞,并且该用途还包括施用检查点抑制剂,例如抗PD-1抗体、抗PD-L1抗体或CTLA4抗体,例如如本文别处所述。The use of this method also includes the administration of checkpoint inhibitors, such as anti-PD-1 antibodies, anti-PD-L1 antibodies, or CTLA4 antibodies, as described elsewhere herein.
方面31-包含抗CCR8抗体的顺序组合治疗Aspect 31 - Sequential combination therapy including anti-CCR8 antibodies
根据一个方面,提供了用于治疗肿瘤的抗CCR8抗体和另外的治疗活性化合物或疗法,其中在第一剂抗CCR8抗体之后施用一剂另外的治疗活性化合物或疗法,例如According to one aspect, an anti-CCR8 antibody for treating tumors and a further therapeutically active compound or therapy are provided, wherein a dose of the further therapeutically active compound or therapy is administered after a first dose of the anti-CCR8 antibody, for example...
a)在抗CCR8抗体使瘤内CD8细胞与T reg细胞的比率至少增加2、3、4或5倍后,或a) After anti-CCR8 antibodies increase the ratio of intratumoral CD8 cells to T reg cells by at least 2, 3, 4, or 5 times, or
b)在抗CCR8抗体耗竭至少40%、45%、50%、55%、60%、65%或70%的瘤内Treg细胞后。b) After the anti-CCR8 antibody depletes at least 40%, 45%, 50%, 55%, 60%, 65%, or 70% of the intratumoral Treg cells.
换而言之,提供了一种抗CCR8抗体,优选地如本文别处所述的诱导ADCC和/或ADCP的抗CCR8抗体,用于治疗肿瘤,其中该用途包括施用另外的治疗活性化合物或疗法,其中在第一剂抗CCR8抗体之后施用一剂另外的治疗活性化合物或疗法,优选地In other words, an anti-CCR8 antibody, preferably an anti-CCR8 antibody that induces ADCC and/or ADCP as described elsewhere herein, is provided for the treatment of tumors, wherein this use includes the administration of additional therapeutically active compounds or therapies, wherein an additional therapeutically active compound or therapy is administered after a first dose of the anti-CCR8 antibody, preferably.
a)在抗CCR8抗体诱导肿瘤内CD8细胞与T reg细胞比率至少增加2、3、4或5倍后,或a) After anti-CCR8 antibody induces an increase of at least 2, 3, 4, or 5 times in the ratio of CD8 cells to T reg cells within the tumor, or
b)在抗CCR8抗体耗竭至少40%、45%、50%、55%、60%、65%或70%的肿瘤内Treg细胞后。b) After the anti-CCR8 antibody depletes at least 40%, 45%, 50%, 55%, 60%, 65%, or 70% of the tumor's intratumoral Treg cells.
根据优选的治疗方案,治疗开始于施用第一剂抗CCR8抗体(例如如上所述每天一次、每周一次、q2w、q3w或q4w),随后施用另外的治疗活性化合物或疗法。不受理论的束缚,应该选择抗CCR8抗体的初始剂量和另外的治疗活性化合物之间的时间以允许至少40、50或60%的肿瘤内Treg耗竭。抗CCR8抗体可以是如本文所述的本发明的抗CCR8抗体,但也可以是任何其他治疗上合适的抗CCR8抗体。肿瘤可以是本文所述的任何肿瘤,例如对于第22方面。优选地,肿瘤或疾病的特征在于趋化因子受体阳性细胞,例如CCR8阳性细胞,例如CCR8阳性调节性T细胞或CCR8阳性肿瘤细胞。优选地,该肿瘤是或最初是ICI响应性肿瘤。由于对PD(L)-1抗体的获得性耐药可能会受到肿瘤内激活的调节性T细胞(以CCR8表达为特征)的强烈影响,因此使用抗CCR8抗体与检查点抑制剂相结合的顺序治疗有利于克服这种获得性耐药。发现在第一剂抗CCR8抗体后施用另外的治疗活性化合物或疗法可显著提高治疗效果,即使对于极具挑战性的肿瘤模型也是如此。第一剂抗CCR8抗体与另外治疗活性化合物的剂量之间的时间应足以诱导第一抗肿瘤免疫反应。根据本文提供的数据(参见实施例12.6ff),这表现为肿瘤内CD8细胞与T reg细胞的比率至少增加2、3、4或5倍或(暂时)耗竭至少40%、45%、50%、55%、60%、65%或70%的肿瘤内Treg细胞。According to the preferred treatment regimen, treatment begins with the administration of a first dose of the anti-CCR8 antibody (e.g., once daily, once weekly, q2w, q3w, or q4w as described above), followed by the administration of additional therapeutically active compounds or therapies. Without being bound by theory, the time between the initial dose of the anti-CCR8 antibody and the additional therapeutically active compound should be chosen to allow at least 40, 50, or 60% depletion of intratumoral Tregs. The anti-CCR8 antibody may be the anti-CCR8 antibody of the present invention as described herein, but may also be any other therapeutically suitable anti-CCR8 antibody. The tumor may be any tumor described herein, such as for aspect 22. Preferably, the tumor or disease is characterized by chemokine receptor-positive cells, such as CCR8-positive cells, such as CCR8-positive regulatory T cells or CCR8-positive tumor cells. Preferably, the tumor is or is initially an ICI-responsive tumor. Because acquired resistance to PD(L)-1 antibodies can be strongly influenced by tumor-activated regulatory T cells (characterized by CCR8 expression), sequential therapy combining anti-CCR8 antibodies with checkpoint inhibitors is beneficial in overcoming this acquired resistance. Administering an additional therapeutically active compound or therapy after the first dose of anti-CCR8 antibody has been found to significantly improve treatment efficacy, even in highly challenging tumor models. The time between the first dose of anti-CCR8 antibody and the dose of the additional therapeutically active compound should be sufficient to induce a primary anti-tumor immune response. Based on the data provided herein (see Example 12.6ff), this manifests as an increase of at least 2, 3, 4, or 5-fold in the ratio of intratumoral CD8 cells to T reg cells, or (temporarily) depletion of at least 40%, 45%, 50%, 55%, 60%, 65%, or 70% of intratumoral T reg cells.
另外的治疗活性化合物或疗法可以是本文别处公开的任何化合物或疗法。治疗活性化合物可以是也可以不是检查点抑制剂,例如抗PD-L1抗体、抗PD1抗体或抗CTLA4抗体。尽管第二治疗剂可以是非靶向治疗剂,但已发现靶向治疗剂对于该目的是高度优选的。如本文所定义的靶向治疗剂是特异性识别肿瘤细胞而不是所有快速分裂细胞或免疫细胞群的治疗活性化合物。尽管靶向所有分裂细胞或影响免疫细胞群的药物可以组合使用并可以提高疗效(参见实施例12.6.8、12.6.9),但它们可能会干扰可持续免疫肿瘤响应所需的免疫细胞群。通过使用靶向肿瘤细胞特异性表达的蛋白的抗体解决了这个问题。优选的靶向治疗是结合由肿瘤细胞特异性表达的蛋白的抗体。The additional therapeutically active compound or therapy may be any compound or therapy disclosed elsewhere herein. The therapeutically active compound may or may not be a checkpoint inhibitor, such as an anti-PD-L1 antibody, an anti-PD1 antibody, or an anti-CTLA4 antibody. Although the second therapeutic agent may be a non-targeted agent, targeted agents have been found to be highly preferred for this purpose. A targeted agent, as defined herein, is a therapeutically active compound that specifically recognizes tumor cells rather than all rapidly dividing cells or immune cell populations. While drugs that target all dividing cells or affect immune cell populations can be used in combination and may improve efficacy (see Examples 12.6.8, 12.6.9), they may interfere with the immune cell populations required for a sustained immune-tumor response. This problem is addressed by using antibodies that target proteins specifically expressed by tumor cells. Preferred targeted therapies are antibodies that bind to proteins specifically expressed by tumor cells.
优选地,另外的治疗活性化合物或疗法选自Preferably, the additional therapeutically active compounds or therapies are selected from...
a)针对检查点蛋白的抗体或小分子,例如PD-(L)1或CTLA-4,a) Antibodies or small molecules targeting checkpoint proteins, such as PD-(L)1 or CTLA-4,
b)化疗剂,优选紫杉烷、紫杉醇、多柔比星、顺铂、卡铂、奥沙利铂或吉西他滨,b) Chemotherapy agents, preferably taxane, paclitaxel, doxorubicin, cisplatin, carboplatin, oxaliplatin, or gemcitabine.
c)靶向其他趋化因子受体的抗体,例如CCR1、CCR2、CCR3、CCR4、CCR5、CCR6、CCR7、CCR8、CCR9、CCR1 0、CXCR1、CXCR2、CXCR3、CXCR4、CXCR5、CXCR6、CX3CR1或CXCR1,c) Antibodies targeting other chemokine receptors, such as CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10, CXCR1, CXCR2, CXCR3, CXCR4, CXCR5, CXCR6, CX3CR1, or CXCR1.
d)靶向肿瘤细胞特异性表达的蛋白的抗体,d) Antibodies targeting proteins specifically expressed by tumor cells.
e)靶向HER2和/或EGFR的抗体或小分子,e) Antibodies or small molecules targeting HER2 and/or EGFR,
f)靶向激酶抑制剂,如索拉非尼、瑞戈非尼或MEKi-1,f) Targeted kinase inhibitors, such as sorafenib, regorafenib, or MEKi-1,
g)任何头颈癌、乳腺癌、胃癌、肺癌、鳞状细胞癌、食道肿瘤、黑色素瘤、膀胱癌、肝癌和/或前列腺癌的标准治疗,g) Standard treatment for any head and neck cancer, breast cancer, gastric cancer, lung cancer, squamous cell carcinoma, esophageal tumor, melanoma, bladder cancer, liver cancer, and/or prostate cancer.
h)放射治疗,和/或h) Radiation therapy, and/or
i)(用于)肿瘤内B细胞,优选地CD19+B细胞耗竭的化合物或抗体。i) For use with tumor B cells, preferably compounds or antibodies that deplete CD19+ B cells.
可以选择合适的紫杉烷,例如来自紫杉醇、白蛋白结合型紫杉醇、卡巴他赛或多烯紫杉醇或其衍生物。Suitable taxanes can be selected, such as those derived from paclitaxel, albumin-bound paclitaxel, cabazitaxel, or docetaxel or their derivatives.
优选地,另外的治疗活性化合物或疗法的剂量是所述另外的治疗活性化合物或疗法的第一剂量。Preferably, the dose of the additional therapeutically active compound or therapy is the first dose of the additional therapeutically active compound or therapy.
方面32-分层方法/诊断方法Aspect 32 - Stratification Methods/Diagnostic Methods
如本文别处所讨论的,针对根据第22方面的第四实施方式描述的分层步骤可以用作根据第22方面的治疗方法的一部分,或者单独提供作为As discussed elsewhere herein, the layering steps described for the fourth embodiment according to aspect 22 can be used as part of the treatment method according to aspect 22, or provided separately as...
a)选择最有可能受益于抗CCR8抗体治疗的受试者的方法,a) The method for selecting subjects most likely to benefit from anti-CCR8 antibody treatment.
b)诊断肿瘤对抗CCR8抗体治疗敏感的诊断方法,或b) Diagnostic methods for diagnosing tumors that are sensitive to anti-CCR8 antibody therapy, or
c)一种监测抗CCR8抗体治疗成功的方法。c) A method for monitoring the success of anti-CCR8 antibody therapy.
对于当前方面,抗体可以是根据本发明的抗体,但也可以是任何治疗上合适的抗CCR8抗体。For the present invention, the antibody may be the antibody according to the present invention, but may also be any therapeutically suitable anti-CCR8 antibody.
用于抗CCR8抗体治疗的生物标志物Biomarkers for anti-CCR8 antibody therapy
到目前为止,没有生物标志物可用于预测或监测抗CCR8抗体的治疗成功率。虽然所证明的作用模式表明CCR8本身可以作为一种可能的生物标志物,但发明人发现CCR8水平在临床设置或临床研究中有些难以评估。为了解决这个紧迫的问题,发明人提出了假设并且可以验证其中一些作为具有出色预测能力的合适生物标志物,参见例如实施例12.7.1和12.7.2。标志物表达水平通常用本领域已知的测定或方法确定,随后将该水平与本文别处所述的参考值进行比较,并随后用于预测或监测治疗反应。To date, no biomarker has been available for predicting or monitoring the success rate of treatment with anti-CCR8 antibodies. While the demonstrated mode of action suggests that CCR8 itself could serve as a potential biomarker, the inventors have found CCR8 levels somewhat difficult to assess in clinical settings or clinical studies. To address this pressing issue, the inventors have proposed hypotheses, some of which can be verified as suitable biomarkers with excellent predictive capabilities, see, for example, Examples 12.7.1 and 12.7.2. Biomarker expression levels are typically determined using assays or methods known in the art, and then compared to reference values described elsewhere herein, and subsequently used to predict or monitor treatment response.
提供了用于将受试者诊断/分级为具有抗CCR8抗体治疗敏感的肿瘤的方法的生物标志物,该用途包括Biomarkers are provided for methods of diagnosing/grading subjects with tumors sensitive to anti-CCR8 antibody therapy, the uses of which include
a.确定肿瘤或包含调节性T细胞的肿瘤样品中生物标志物的水平,a. Determine the levels of biomarkers in tumor samples or tumor samples containing regulatory T cells.
b.将生物标志物的水平与参考样本或值进行比较,以及b. Compare the levels of biomarkers with reference samples or values, and
c.如果生物标志物的水平高于或等于参考样品或值,则将受试者诊断/分级为具有抗CCR8抗体治疗敏感的肿瘤,c. If the biomarker level is higher than or equal to the reference sample or value, the subject will be diagnosed/classified as having a tumor sensitive to anti-CCR8 antibody therapy.
其中生物标志物是Among them, biomarkers are
d.免疫检查点蛋白,优选地PD-1、PD-L1或CTLA4,d. Immune checkpoint proteins, preferably PD-1, PD-L1, or CTLA4.
e.粒酶或免疫细胞标志物,优选地淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞或其组合的标志物,e. Granulase or immune cell markers, preferably markers of lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or combinations thereof.
f.Treg浸润标志物,优选地CCR8,FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7或CXCL9,f. Treg infiltration markers, preferably CCR8, FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, or CXCL9.
g.T细胞标志物或细胞毒性T细胞标志物优选地选自CD3、CD4、CD8、CD25、CXCR3、CCR5、4-1BB、OX-40或GITR,g. T cell markers or cytotoxic T cell markers are preferably selected from CD3, CD4, CD8, CD25, CXCR3, CCR5, 4-1BB, OX-40, or GITR.
h.干扰素或干扰素诱导蛋白,优选地选自IFNγ、IL10、IL12p70、IL1β、IL2和TNFα,h. Interferon or interferon-induced protein, preferably selected from IFNγ, IL10, IL12p70, IL1β, IL2 and TNFα,
i.补体因子,i. Complement factors,
j.丝氨酸蛋白酶抑制剂,和/或j. serine protease inhibitors, and/or
k.源自表12.7.2.1、12.7.2.2或12.7.2.3的基因的分子。k. Molecules derived from genes in Tables 12.7.2.1, 12.7.2.2, or 12.7.2.3.
优选地,生物标志物是免疫检查点蛋白,最优选地PD-1、PD-L1或CTLA4。Preferably, the biomarker is an immune checkpoint protein, most preferably PD-1, PD-L1, or CTLA4.
还提供了生物标志物用于预测或监测包括施用抗CCR8抗体的疗法的治疗成功的用途,该用途包括It also provides the use of biomarkers for predicting or monitoring treatment success, including the administration of anti-CCR8 antibodies, which includes
a.确定样本中生物标志物的水平,以及a. Determine the levels of biomarkers in the sample, and
b.将生物标志物的水平与参考样本或值进行比较,b. Compare the levels of biomarkers with reference samples or values.
其中生物标志物是Among them, biomarkers are
c.免疫检查点蛋白,优选地PD-1、PD-L1或CTLA4,c. Immune checkpoint proteins, preferably PD-1, PD-L1, or CTLA4.
d.颗粒酶或免疫细胞标志物,优选地淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞或其组合d. Granzymes or immune cell markers, preferably lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or combinations thereof.
e.Treg浸润标志物,优选地选自FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7,CXCL9,e. Treg infiltration markers, preferably selected from FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, CXCL9.
f.T细胞标志物或细胞毒性T细胞标志物,优选地选自CD3、CD4、CD8、CD25、CXCR3、CCR5和TNF受体超家族成员,例如4-1BB、OX-40或GITR,f. T cell markers or cytotoxic T cell markers, preferably selected from CD3, CD4, CD8, CD25, CXCR3, CCR5 and TNF receptor superfamily members, such as 4-1BB, OX-40 or GITR.
g.干扰素诱导蛋白,优选地选自IFNγ、IL10、IL12p70、IL1β、IL2和TNFα,g. Interferon-induced protein, preferably selected from IFNγ, IL10, IL12p70, IL1β, IL2 and TNFα,
h.补体因子,h. Complement factors,
i.丝氨酸蛋白酶抑制剂和/或i. serine protease inhibitors and/or
j.源自表12.7.2.1、12.7.2.2或12.7.2.3的基因的分子。j. Molecules derived from genes in Tables 12.7.2.1, 12.7.2.2, or 12.7.2.3.
优选地,生物标志物是免疫检查点蛋白,最优选地PD-1、PD-L1或CTLA4。Preferably, the biomarker is an immune checkpoint protein, most preferably PD-1, PD-L1, or CTLA4.
此外,还提供了结合生物标志物的分子,其用于将受试者诊断/分级为具有抗CCR8抗体治疗敏感的肿瘤的方法,该用途包括使用结合生物标志物的分子测定肿瘤或肿瘤样品中生物标志物的水平,其中生物标志物是(优选地)In addition, a method is provided for diagnosing/grading a subject with a tumor sensitive to anti-CCR8 antibody therapy using a molecule that binds to the biomarker. This use includes determining the level of the biomarker in a tumor or tumor sample using the molecule that binds to the biomarker, wherein the biomarker is (preferably)
a.免疫检查点蛋白,优选地PD-1、PD-L 1或CTLA4,a. Immune checkpoint proteins, preferably PD-1, PD-L1, or CTLA4.
b.颗粒酶或免疫细胞标志物,优选地淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞或其组合的标志物b. Granulase or immune cell markers, preferably markers of lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or combinations thereof.
c.Treg浸润标志物,优选地CCR8,FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7或CXCL9,c. Treg infiltration markers, preferably CCR8, FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, or CXCL9.
d.T细胞标志物或细胞毒性T细胞标志物优选地选自CD3、CD4、CD8、CD25、CXCR3、CCR5、4-1BB、OX-40或GITR,d. T cell markers or cytotoxic T cell markers are preferably selected from CD3, CD4, CD8, CD25, CXCR3, CCR5, 4-1BB, OX-40, or GITR.
e.干扰素或干扰素诱导蛋白,优选地选自IFNγ、IL10、IL12p70、IL1β、IL2和TNFα,e. Interferon or interferon-induced protein, preferably selected from IFNγ, IL10, IL12p70, IL1β, IL2 and TNFα,
f.补体因子,f. Complement factors,
g.丝氨酸蛋白酶抑制剂,和/或g. serine protease inhibitors, and/or
h.源自表12.7.2.1、12.7.2.2或12.7.2.3的基因的分子。h. Molecules derived from genes in Tables 12.7.2.1, 12.7.2.2, or 12.7.2.3.
结合生物标志物的分子优选地是抗体或抗原结合片段,或其缀合物。最优选地,结合生物标志物的分子是抗PD-1、PD-L1或CTLA4抗体,例如Nivolumab、Pembrolizumab、Atezolizumab、Avelumab、Durvalumab、Cemiplimab、Dostarlimab或Ipilimumab。The molecule that binds to the biomarker is preferably an antibody or antigen-binding fragment, or a conjugate thereof. Most preferably, the molecule that binds to the biomarker is an anti-PD-1, PD-L1, or CTLA4 antibody, such as Nivolumab, Pembrolizumab, Atezolizumab, Avelumab, Durvalumab, Cemiplimab, Dostarlimab, or Ipilimumab.
此外,还提供结合生物标志物的分子用于预测或监测包括施用抗CCR8抗体的疗法的治疗成功的用途,该用途包括使用结合生物标志物的分子确定肿瘤或肿瘤样品中生物标志物的水平,其中生物标志物是(优选地)Furthermore, the use of molecules that bind biomarkers for predicting or monitoring treatment success, including the administration of anti-CCR8 antibodies, is provided. This use includes using molecules that bind biomarkers to determine the level of a biomarker in a tumor or tumor sample, wherein the biomarker is (preferably)
a.免疫检查点蛋白,优选地PD-1、PD-L1或CTLA4,a. Immune checkpoint proteins, preferably PD-1, PD-L1, or CTLA4.
b.粒酶或免疫细胞标志物,优选地淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞或其组合的标志物,b. Granulase or immune cell markers, preferably markers of lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or combinations thereof.
c.Treg浸润标志物,优选地CCR8,FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7或CXCL9,c. Treg infiltration markers, preferably CCR8, FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, or CXCL9.
d.T细胞标志物或细胞毒性T细胞标志物优选选自CD3、CD4、CD8、CD25、CXCR3、CCR5、4-1BB、OX-40或GITR,d. T cell markers or cytotoxic T cell markers are preferably selected from CD3, CD4, CD8, CD25, CXCR3, CCR5, 4-1BB, OX-40, or GITR.
e.干扰素或干扰素诱导蛋白,优选地选自IFNγ、IL10、IL12p70、IL1β、IL2和TNFα,e. Interferon or interferon-induced protein, preferably selected from IFNγ, IL10, IL12p70, IL1β, IL2 and TNFα,
f.补体因子,f. Complement factors,
g.丝氨酸蛋白酶抑制剂,和/或g. serine protease inhibitors, and/or
h.源自表12.7.2.1、12.7.2.2或12.7.2.3的基因的分子,和h. Molecules derived from genes in Tables 12.7.2.1, 12.7.2.2, or 12.7.2.3, and
其中结合生物标志物的分子优选地是抗体或抗原结合片段,或其缀合物。最优选地,结合生物标志物的分子是抗检查点、抗PD-1、抗PD-L1或抗CTLA4抗体,例如Nivolumab、Pembrolizumab、Atezolizumab、Avelumab、Durvalumab、Cemiplimab、Dostarlimab或Ipilimumab。The molecule that binds the biomarker is preferably an antibody or antigen-binding fragment, or a conjugate thereof. Most preferably, the molecule that binds the biomarker is an anti-checkpoint, anti-PD-1, anti-PD-L1, or anti-CTLA4 antibody, such as Nivolumab, Pembrolizumab, Atezolizumab, Avelumab, Durvalumab, Cemiplimab, Dostarlimab, or Ipilimumab.
在当前方面的优选的实施方式中,生物标志物是免疫细胞标志物,结合生物标志物的分子优选地是结合淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞的标志物或其组合的抗体。In a preferred embodiment of the present invention, the biomarker is an immune cell marker, and the molecule binding the biomarker is preferably an antibody that binds to a marker of lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or a combination thereof.
在当前方面的优选的实施方式中,结合生物标志物的分子是结合Treg浸润标志物的分子,优选地结合CCR8,FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7或CXCL9。In a preferred embodiment of the present aspect, the molecule that binds the biomarker is a molecule that binds the Treg infiltration marker, preferably CCR8, FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, or CXCL9.
在当前方面的优选的实施方式中,结合生物标志物的分子是结合T细胞标志物的抗体,T细胞标志物优选地选自CD3、CD4、CD8、CD25、CXCR3、CCR5和TNF受体超家族成员,包括4-1BB、OX-40、或GITR。In a preferred embodiment of the present aspect, the molecule that binds the biomarker is an antibody that binds a T-cell marker, which is preferably selected from CD3, CD4, CD8, CD25, CXCR3, CCR5 and members of the TNF receptor superfamily, including 4-1BB, OX-40, or GITR.
在当前方面的优选的实施方式中,结合生物标志物的分子是结合干扰素或干扰素诱导蛋白的抗体,优选地选自INFγ、IL10、IL12p70、IL1β、IL2和TNFα。In a preferred embodiment of the present aspect, the molecule that binds the biomarker is an antibody that binds to interferon or interferon-induced protein, preferably selected from INFγ, IL10, IL12p70, IL1β, IL2 and TNFα.
免疫检查点蛋白作为抗CCR8抗体治疗的生物标志物Immune checkpoint proteins as biomarkers for anti-CCR8 antibody therapy
根据本发明,令人惊奇地发现,对于至少最初对ICI治疗有响应,特别是对抗PD-(L)1或CTLA4抗体治疗有响应的受试者,对使用抗CCR8抗体的(单一)疗法的响应得到改善,参见例如表12.7.1。由于PD-L1表达是对抗PD-L1抗体治疗的响应的预测指标,发明人假设PD-L1表达和检查点蛋白表达本身也可能适合直接预测抗CCR8抗体治疗的响应。这一假设可以通过PD-L1表达和抗CCR8抗体治疗响应之间的相关数据得到证实(表12.8.1)。可以如本领域已知的那样确定PD-L1表达,例如不限于使用肿瘤比例评分(TPS)、联合阳性评分(CPS)或mRNA表达。因此,发明人建议免疫检查点标志物,特别是PD-L1作为分层的替代标志物,以克服CCR8难以分析并因此难以实施的问题,以便选择最有可能受益于抗CCR8抗体治疗的患者群体。According to the present invention, it has been surprisingly found that, for subjects who initially responded to ICI therapy, particularly to anti-PD-(L)1 or CTLA4 antibody therapy, the response to (monotherapy) using anti-CCR8 antibodies was improved, see, for example, Table 12.7.1. Since PD-L1 expression is a predictor of response to anti-PD-L1 antibody therapy, the inventors hypothesized that PD-L1 expression and checkpoint protein expression themselves may also be suitable for directly predicting response to anti-CCR8 antibody therapy. This hypothesis can be confirmed by correlation data between PD-L1 expression and response to anti-CCR8 antibody therapy (Table 12.8.1). PD-L1 expression can be determined as is known in the art, for example, but not limited to using tumor proportion score (TPS), combined positive score (CPS), or mRNA expression. Therefore, the inventors propose immune checkpoint biomarkers, particularly PD-L1, as alternative biomarkers for stratification to overcome the difficulty in analyzing and therefore implementing CCR8 in order to select the patient population most likely to benefit from anti-CCR8 antibody therapy.
因此,提供了结合免疫检查点蛋白的分子,用于将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤的方法,该方法包括Therefore, a method is provided for diagnosing/grading subjects with tumors sensitive to anti-CCR8 antibody therapy, comprising a molecule that binds to immune checkpoint proteins.
a.确定肿瘤(样本)中免疫检查点蛋白的表达水平,a. Determine the expression levels of immune checkpoint proteins in tumor (samples),
b.将免疫检查点蛋白表达水平与参考样本或值进行比较,以及b. Compare the expression levels of immune checkpoint proteins with reference samples or values, and
c.如果免疫检查点蛋白表达水平高于或等于参考样品或值,则将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤。c. If the expression level of immune checkpoint proteins is higher than or equal to the reference sample or value, the subject will be diagnosed/graded as having a tumor sensitive to anti-CCR8 antibody therapy.
此外,提供了结合免疫检查点蛋白的分子用于监测抗CCR8抗体疗法的治疗成功的用途,该方法包括Furthermore, the use of molecules that bind to immune checkpoint proteins for monitoring the therapeutic success of anti-CCR8 antibody therapy is provided, the method comprising:
a.确定肿瘤(样本)/样本中免疫检查点蛋白的表达水平,以及a. Determine the expression levels of immune checkpoint proteins in tumor (sample)/sample, and
b.将免疫检查点蛋白表达水平与参考样本或值进行比较。b. Compare the expression levels of immune checkpoint proteins with reference samples or values.
结合免疫检查点蛋白的分子优选地是抗体。免疫检查点蛋白优选地为PD-1、PD-L1或CTLA4。结合免疫检查点蛋白的分子优选地是结合PD-1、PD-L1或CTLA4的抗体。例如,抗体可以是PD-L128-8、PD-L1 22C3、PD-L1 SP142、PD-L1 SP263或本领域已知作为伴随诊断的任何其他合适的抗体。在特别优选的实施方式中,检查点蛋白表达水平基于组合阳性评分(CPS)或肿瘤比例评分(TPS)来确定。如果免疫检查点蛋白表达存在或高,如CPS≥1,优选地CPS≥5,最优选地CPS≥10所示,或如TPS≥1%,优选地TPS≥10%,最优选地TPS≥50%所示,则受试者或患者的肿瘤被诊断/分层为对抗CCR8抗体治疗敏感。因此,在一些优选的实施方式中,参考值是CPS=1,更优选地CPS=5或最优选地CPS=10。在一些其他或相同的优选地实施方式中,参考值是TPS=1%,更优选地TPS=10%,或最优选地TPS≥50%。The molecule that binds to the immune checkpoint protein is preferably an antibody. The immune checkpoint protein is preferably PD-1, PD-L1, or CTLA4. The molecule that binds to the immune checkpoint protein is preferably an antibody that binds to PD-1, PD-L1, or CTLA4. For example, the antibody may be PD-L128-8, PD-L1 22C3, PD-L1 SP142, PD-L1 SP263, or any other suitable antibody known in the art as a companion diagnostic. In a particularly preferred embodiment, the checkpoint protein expression level is determined based on a combined positive score (CPS) or a tumor proportion score (TPS). If immune checkpoint protein expression is present or high, such as CPS ≥ 1, preferably CPS ≥ 5, most preferably CPS ≥ 10, or such as TPS ≥ 1%, preferably TPS ≥ 10%, most preferably TPS ≥ 50%, then the subject's or patient's tumor is diagnosed/stratified as sensitive to anti-CCR8 antibody treatment. Therefore, in some preferred embodiments, the reference value is CPS = 1, more preferably CPS = 5, or most preferably CPS = 10. In some other or similar preferred embodiments, the reference value is TPS = 1%, more preferably TPS = 10%, or most preferably TPS ≥ 50%.
在一些优选地实施方式中,PD-L1表达通过CPS≥1确定,优选通过CPS≥5,最优选通过CPS≥10或通过TPS≥1%,优选通过TPS≥10%,最优选通过TPS≥50%。In some preferred embodiments, PD-L1 expression is determined by CPS≥1, preferably by CPS≥5, most preferably by CPS≥10 or by TPS≥1%, preferably by TPS≥10%, and most preferably by TPS≥50%.
Treg浸润标志物作为抗CCR8抗体治疗的生物标志物Treg infiltration markers as biomarkers for anti-CCR8 antibody therapy
提供了一种结合Treg浸润标志物的分子,用于将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤的方法,该方法包括A molecule that binds to a Treg invasion marker is provided for a method of diagnosing/grading subjects with tumors sensitive to anti-CCR8 antibody therapy, the method comprising:
a.确定肿瘤(样品)中Treg浸润标志物的表达水平,a. Determine the expression levels of Treg invasion markers in tumor (samples).
b.将Treg浸润标志物表达水平与参考样本或值进行比较,以及b. Compare the expression levels of the Treg infiltration marker with reference samples or values, and
c.如果Treg浸润标志物的水平高于或等于参考样品或值,则将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤。c. If the level of the Treg invasion marker is higher than or equal to the reference sample or value, the subject will be diagnosed/classified as having a tumor sensitive to anti-CCR8 antibody therapy.
Treg浸润标志物是在激活的Treg上高表达的标志物。优选地,Treg浸润标志物选自CCR8,FOXP3,ICOS,CCR4,TIGIT,P2RY10,CD80,TNFRSF9,CD3(G),SLAMF1,IL7R,IL2RB,CTLA4,CD5,ITK,IL2RA,LAX1,IKZF3,GBP5,CXCR6,SIRPG,CD2,CSF2RB,SLAMF7,CXCL9,参见表11.1.1、表12.8.1。Treg浸润标志物可以不同于CCR8。结合Treg浸润标志物的分子优选地是抗体,例如结合一种或多种Treg浸润标志物的抗体。Treg infiltration markers are markers highly expressed on activated Tregs. Preferably, the Treg infiltration markers are selected from CCR8, FOXP3, ICOS, CCR4, TIGIT, P2RY10, CD80, TNFRSF9, CD3(G), SLAMF1, IL7R, IL2RB, CTLA4, CD5, ITK, IL2RA, LAX1, IKZF3, GBP5, CXCR6, SIRPG, CD2, CSF2RB, SLAMF7, and CXCL9 (see Tables 11.1.1 and 12.8.1). Treg infiltration markers may differ from CCR8. The molecule binding the Treg infiltration marker is preferably an antibody, such as an antibody binding to one or more Treg infiltration markers.
本文公开的Treg浸润标志物也可用作控制治疗成功的生物标志物,例如如本文别处所述。如果获得至少40%或50%的(暂时的)Treg耗竭,例如通过将Treg浸润标志物减少2倍,则认为治疗成功。The Treg infiltration markers disclosed herein can also be used as biomarkers for controlling treatment success, as described elsewhere herein. Treatment success is considered to be achieved if at least 40% or 50% (temporary) Treg exhaustion is achieved, for example by reducing Treg infiltration markers by a factor of 2.
免疫细胞标志物作为抗CCR8抗体治疗的生物标志物Immune cell markers as biomarkers for anti-CCR8 antibody therapy
提供了一种结合免疫细胞标志物的分子,用于将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤的方法,该方法包括A method is provided for diagnosing/grading a subject with a molecule that binds to an immune cell marker for diagnosing/classifying a tumor sensitive to anti-CCR8 antibody therapy, the method comprising:
a.确定肿瘤(样本)中免疫细胞标志物的表达水平,a. Determine the expression levels of immune cell markers in tumor (samples),
b.将免疫细胞标志物表达水平与参考样本或值进行比较,以及b. Compare the expression levels of immune cell markers with reference samples or values, and
c.如果免疫细胞标志物的水平高于或等于参考样品或值,则将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤。c. If the level of immune cell markers is higher than or equal to the reference sample or value, the subject will be diagnosed/classified as having a tumor sensitive to anti-CCR8 antibody therapy.
免疫细胞标志物可以是淋巴细胞、效应细胞、T细胞、细胞毒性T细胞、巨噬细胞、M1巨噬细胞、M2巨噬细胞、B细胞、NK细胞或其组合的标志物。这些免疫细胞群的合适标志物在整个公开内容中有所描述。例如,合适的T细胞标志物包括CD3(例如CD3E、D和/或G)。例如,合适的细胞毒性T细胞标志物包括CD8(例如CD8A和/或B)。例如,合适的巨噬细胞标志物包括MS4A7。例如,合适的巨噬细胞M1细胞标志物包括Acod1。例如,合适的M2巨噬细胞标志物包括Mrc1。例如,合适的B细胞标志物包括CD19、CD20、CD22和/或MSA41。Immune cell markers can be markers of lymphocytes, effector cells, T cells, cytotoxic T cells, macrophages, M1 macrophages, M2 macrophages, B cells, NK cells, or combinations thereof. Suitable markers for these immune cell populations are described throughout this disclosure. For example, suitable T cell markers include CD3 (e.g., CD3E, D, and/or G). For example, suitable cytotoxic T cell markers include CD8 (e.g., CD8A and/or B). For example, suitable macrophage markers include MS4A7. For example, suitable M1 macrophage markers include Acod1. For example, suitable M2 macrophage markers include Mrc1. For example, suitable B cell markers include CD19, CD20, CD22, and/or MSA41.
本文公开的免疫细胞标志物也可用作控制治疗成功的生物标志物,例如如本文别处所述。如果发生(暂时的)免疫细胞增加,例如至少50%,例如如免疫细胞浸润标志物增加至少2倍所示,治疗被认为是成功的。The immune cell markers disclosed herein can also be used as biomarkers for controlling treatment success, as described elsewhere herein. Treatment is considered successful if a (temporary) increase in immune cells occurs, for example, at least 50%, or as indicated by an increase of at least 2-fold in immune cell infiltration markers.
T细胞标志物作为抗CCR8抗体治疗的生物标志物T-cell markers as biomarkers for anti-CCR8 antibody therapy
提供了一种结合T细胞标志物的分子,用于将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤的方法,该方法包括A method is provided for diagnosing/grading subjects with tumors sensitive to anti-CCR8 antibody therapy using a molecule that binds to T-cell markers, the method comprising:
a.确定肿瘤(样本)中T细胞标志物的表达水平,a. Determine the expression levels of T cell markers in tumor (samples),
b.将T细胞标志物表达水平与参考样本或值进行比较,以及b. Compare the expression levels of T cell markers with reference samples or values, and
c.如果T细胞标志物的水平高于或等于参考样品或值,则将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤。c. If the level of T-cell markers is higher than or equal to the reference sample or value, the subject will be diagnosed/classified as having a tumor sensitive to anti-CCR8 antibody therapy.
T细胞标志物可以是在T细胞如激活的T细胞上高表达的标志物。优选地,T细胞标志物选自CD3、CD4、CD8、CD25、CXCR3、CCR5和TNF受体超家族成员,包括4-1BB、OX-40或GITR。结合T细胞标志物的分子优选地是抗体,例如结合本文公开的一种或多种T细胞标志物的抗体。T-cell markers can be markers highly expressed on T cells, such as activated T cells. Preferably, T-cell markers are selected from CD3, CD4, CD8, CD25, CXCR3, CCR5, and members of the TNF receptor superfamily, including 4-1BB, OX-40, or GITR. Molecules that bind to T-cell markers are preferably antibodies, such as antibodies that bind to one or more T-cell markers disclosed herein.
本文公开的T细胞标志物也可单独或与Treg浸润标志物(例如如本文别处所述)组合用作控制治疗成功的生物标志物。如果发生(暂时的)T细胞增加,例如至少50%,例如如T细胞标志物增加至少2倍所示,治疗被认为是成功的。The T-cell markers disclosed herein can also be used alone or in combination with Treg infiltration markers (such as those described elsewhere herein) as biomarkers for controlling treatment success. Treatment is considered successful if a (transient) increase in T cells occurs, such as at least 50%, or as indicated by an increase in T-cell markers of at least 2-fold.
干扰素或干扰素诱导蛋白作为抗CCR8抗体治疗的生物标志物Interferon or interferon-induced protein as biomarkers for anti-CCR8 antibody therapy
提供了一种干扰素或干扰素诱导蛋白,用于将受试者诊断/分级为具有对抗CCR8抗体治疗敏感的肿瘤或用于监测治疗成功的方法,该方法包括A method is provided for diagnosing/grading subjects with tumors sensitive to anti-CCR8 antibody therapy or for monitoring treatment success, the method comprising:
a.确定肿瘤(样品)中干扰素或干扰素诱导蛋白的水平,a. Determine the level of interferon or interferon-induced protein in the tumor (sample).
b.将干扰素或干扰素诱导蛋白的水平与参考样品或值进行比较,以及b. Compare the levels of interferon or interferon-induced proteins with reference samples or values, and
c.如果干扰素或干扰素诱导蛋白的水平高于或等于参考样品或值,则将受试者诊断/分层为具有对抗CCR8抗体治疗敏感的肿瘤。c. If the level of interferon or interferon-induced protein is higher than or equal to the reference sample or value, the subject will be diagnosed/stratified as having a tumor sensitive to anti-CCR8 antibody therapy.
干扰素或干扰素诱导蛋白优选选自IFNγ、IL10、IL12p70、IL1β、IL2和TNFα。根据本发明,发现CCR8 mRNA表达与炎症标志物IFNγ的相关性对于50种肿瘤适应症是显著的,参见表11.1.2。由此可以得出结论,IFNγ水平可适合作为本文公开的生物标志物。这已得到证实,例如在实施例12.6.2中,IFNγ和TNFα水平与治疗响应相关。在不同的实验中(实施例12.6.6),增加的IFNγ、IL-1b和IL-2水平与改善的功效相关。合适的干扰素刺激基因或蛋白包括但不限于ACOD1,ACTG1,ACTR2,ACTR3,ADAMTS13,AIF1,AQP4,ASS1,B2M,BST2,C9JQL5,CALCOCO2,CAMK2A,CAMK2B,CAMK2D,CAMK2G,CASP1,CCL1,CCL11,CCL13,CCL14,CCL15,CCL15,CCL14,CCL16,CCL17,CCL18,CCL19,CCL2,CCL20,CCL21,CCL22,CCL23,CCL24,CCL25,CCL26,CCL3,CCL3L1,CCL4,CCL4L1,CCL5,CCL7,CCL8,CD40,CD44,CD58,CDC42EP2,CDC42EP4,CIITA,CITED1,CLDN1,CX3CL1,CXCL16,CYP27B1 DAPK1,DAPK3,EDN1,EPRS,EVL,FCGR1A,FCGR1B,FLNB,GAPDH,GBP1,GBP2,GBP4,GBP5,GBP6,GCH1,GSN,HCK,HLA-A,HLA-B,HLA-C,HLA-DPA1,HLA-DPB1,HLA-DQA1,HLA-DQA2,HLA-DQB1,HLA-DQB2,HLA-DRAHLA-DRB1,HLA-DRB3,HLA-DRB4,HLA-DRB5,HLA-E,HLA-F,HLA-G,HLA-H,ICAM1,IFI30,IFITM1,IFITM2,IFITM3,IFNG,IFNGR1,IFNGR2,IL12B,IL12RB1IL23R,IRF1,IRF2,IRF3,IRF4,IRF5,IRF6,IRF7,IRF8,IRF9,JAK1,JAK2,KIF16B,KIF5B,KYNU,LGALS9,MEFV,MID1,MRC1,MT2A,MYO1C,NCAM1,NMI,NOS2,NUB1,OAS1,OAS2,OAS3,OASL,PDE12,PML,PRKCD,PTAFR,RAB12,RAB20,RAB43,RAB7B,RPL13A,RPS6KB1RYDEN,SEC61A1SLC11A1SLC26A6SLC30A8SNCA,SP100,STAR,STAT1,STX4,STX8,STXBP1,STXBP2,STXBP3,STXBP4,SYNCRIPTDGF1,TLR2,TLR3,TLR4,TRIM21,TRIM22,TRIM25,TRIM26,TRIM31,TRIM34,TRIM38,TRIM5,TRIM62,TRIM68,TRIM8,UBD,VAMP3,VCAM1,VIM,VPS26B,WAS,WNT5A,XCL 1,XCL2,ZYX。Interferon or interferon-induced proteins are preferably selected from IFNγ, IL10, IL12p70, IL1β, IL2, and TNFα. According to the present invention, the correlation between CCR8 mRNA expression and the inflammatory marker IFNγ was found to be significant for 50 tumor indications (see Table 11.1.2). It can be concluded that IFNγ levels are suitable as biomarkers disclosed herein. This has been confirmed, for example, in Example 12.6.2, where IFNγ and TNFα levels were associated with treatment response. In different experiments (Example 12.6.6), increased IFNγ, IL-1β, and IL-2 levels were associated with improved efficacy. Suitable interferon-stimulated genes or proteins include, but are not limited to, ACOD1, ACTG1, ACTR2, ACTR3, ADAMTS13, AIF1, AQP4, ASS1, B2M, BST2, C9JQL5, CALCOCO2, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CASP1, CCL1, CCL11, CCL13, CCL14, CCL15, CCL15, CCL14, CCL16, CCL17, CCL18, CCL19, CCL2, CCL20, CCL21, CCL22, CCL23, CCL24, CCL25, CCL26, CCL3, CCL3L1, CCL4, CCL4L1, CCL5, CCL7, and CCL8. , CD40, CD44, CD58, CDC42EP2, CDC42EP4, CIITA, CITED1, CLDN1, CX3CL1, CXCL16, CYP27B1 DAPK1, DAPK3, EDN1, EPRS, EVL, FCGR1A, FCGR1B, FLNB, GAPDH, GBP1, GBP2, GB P4, GBP5, GBP6, GCH1, GSN, HCK, HLA-A, HLA-B, HLA-C, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRAHLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DR B5, HLA-E, HLA-F, HLA-G, HLA-H, ICAM1, IFI30, IFITM1, IFITM2, IFITM3, IFNG, IFNGR1, IFNGR2, IL12B, IL12RB1IL23R, IRF1, IRF2, IRF3, IRF4, IRF5, IRF6, IRF7, IRF8, IRF9, JAK1, JAK2, KIF16B, KIF5B, KYNU, LGALS9, MEFV, MID1, MRC1, MT2A, MYO1C, NCAM1, NMI, NOS2, NUB1, OAS1, OAS2, OAS3, OASL, PDE12, PML, PRKCD, PTAFR, RAB12, RAB2 0,RAB43,RAB7B,RPL13A,RPS6KB1RYDEN,SEC61A1SLC11A1SLC26A6SLC30A8SNCA,SP100,STAR,STAT1,STX4,STX8,STXBP1,STXBP2,STXBP3,STXBP4,SYNCRIPTDGF1,TLR 2. TLR3, TLR4, TRIM21, TRIM22, TRIM25, TRIM26, TRIM31, TRIM34, TRIM38, TRIM5, TRIM62, TRIM68, TRIM8, UBD, VAMP3, VCAM1, VIM, VPS26B, WAS, WNT5A, XCL 1, XCL2, ZYX.
实施例Example
实施例1:比对CC趋化因子受体和CXC趋化因子受体Example 1: Comparison of CC chemokine receptor and CXC chemokine receptor
从Uniprot检索人类CC和CXC趋化因子受体序列并用ClustalOmega比对。结果导入Jalview进行可视化(图1)。带负电荷的氨基酸残基E和D(灰色),以及酪氨酸残基(Y,深灰色)和半胱氨酸残基(C,浅灰色)被突出显示。虽然N端结构域在序列上有偏差,但它们的特点是具有相对较多的带负电荷的氨基酸和酪氨酸残基。Human CC and CXC chemokine receptor sequences were retrieved from Uniprot and aligned using ClustalOmega. The results were imported into Jalview for visualization (Figure 1). Negatively charged amino acid residues E and D (gray), as well as tyrosine residues (Y, dark gray) and cysteine residues (C, light gray) are highlighted. Although the N-terminal domains are sequence-biased, they are characterized by a relatively large number of negatively charged amino acid and tyrosine residues.
实施例2:人、食蟹猴和鼠CCR8的比对Example 2: Comparison of CCR8 in humans, cynomolgus monkeys, and mice
从Uniprot检索人CCR8、食蟹猴CCR8和鼠CCR8序列并用Clustal Omega比对。将结果导入Jalview以进行序列同一性的可视化和计算,参见图2a。虽然人和食蟹猴CCR8的成对比对产生94.37%的序列同一性,但小鼠和人CCR8之间的百分比(百分比ID=70.99)以及小鼠和食蟹猴CCR8之间的百分比(百分比ID=71.55)要低得多。在N端(TRD)区域和C端区域中可以观察到实质性差异。Human, cynomolgus monkey, and mouse CCR8 sequences were retrieved from Uniprot and aligned using Clustal Omega. The results were imported into Jalview for visualization and computation of sequence identity (see Figure 2a). While pairwise alignment of human and cynomolgus monkey CCR8 yielded 94.37% sequence identity, the percentages between mouse and human CCR8 (percentage ID = 70.99) and between mouse and cynomolgus monkey CCR8 (percentage ID = 71.55) were significantly lower. Substantial differences were observed in the N-terminal (TRD) and C-terminal regions.
食蟹猴TRD与人TRD的序列同源性为68%,鼠TRD与人TRD的序列同源性为52%。然而,酸性和酪氨酸硫酸化TRD显示带负电荷的簇,其成功用于产生交叉反应抗体,参见实施例6。至少发现MDYT和YYPD基序在物种之间是保守的。The cynomolgus monkey TRD showed 68% sequence homology with the human TRD, while the mouse TRD showed 52% sequence homology. However, acidic and tyrosine-sulfated TRDs exhibited negatively charged clusters, which were successfully used to generate cross-reactive antibodies (see Example 6). At least the MDYT and YYPD motifs were found to be conserved across species.
实施例3:对特异性结合CCR8的现有技术抗体的评估Example 3: Evaluation of existing-technology antibodies that specifically bind to CCR8
使用表达CCR8的细胞系进行FACS实验,以评估特异性结合CCR8和CCR8染色而市售销售的多种现有技术抗体。小鼠T淋巴瘤细胞系BW5147.4表达鼠CCR8和人皮肤T淋巴瘤,HuT78表达低水平人CCR8。趋化因子受体的现有技术抗体,特别是CCR8的抗体通常具有低特异性,例如Xing et al.,Appl IHC Mol Morphol(2015):“依据我们的经验和如其他人之前发表的,由于可用抗体缺乏特异性,我们无法通过免疫组织化学评估CCR8表达。”,Chenivesse et al.,JI(2012):“我们无法评估CCL18对CD4+CCR8+细胞的吸引力,因为所有市售的抗CCR8抗体都缺乏特异性,这不允许细胞分选,至少在我们手中是这样。”,或Pease,Biochem J(2011):“由于缺乏针对人CCR8的看似可靠的抗体,后者一直存在问题。例如,在一项检查CCR8在CD4+CD25+Treg群体上的表达的研究中,使用市售抗体无法检测到CCR8表面染色,尽管如CCL1驱动的微丝聚合所评估这些细胞明显表达功能性CCR8。”(cf.Xing,Xiaoming,et al.″Expression of the chemokine receptor gene,CCR8,is associatedWith DUSP22 rearrangements in anaplastic large cell lymphoma.″Appliedimmunohistochemistry&molecular morphology:AIMM/official publication of theSociety for Applied Immunohistochemistry 23.8(2015):580;Chenivesse,Cécile,etal.″Pulmonary CCL18 recruits human regulatory T cells.″The Journal ofImmunology 189.1(2012):128-137.;和Pease,James E.″Targeting chemokinereceptors in allergic disease.″Biochemical Journal 434.1(2011):11-24.)。FACS experiments were performed using cell lines expressing CCR8 to evaluate a variety of commercially available, existing-technology antibodies that specifically bind to CCR8 and CCR8 staining. The mouse T-lymphoma cell line BW5147.4 expresses mouse CCR8 and human cutaneous T-lymphoma, while HuT78 expresses low levels of human CCR8. Existing antibodies against chemokine receptors, particularly those against CCR8, often exhibit low specificity. For example, Xing et al., Appl IHC Mol Morphol (2015): “Based on our experience and as previously reported by others, we are unable to assess CCR8 expression by immunohistochemistry due to the lack of specificity of available antibodies.” Chenivesse et al., JI (2012): “We are unable to assess the attractiveness of CCL18 to CD4 + CCR8 + cells because all commercially available anti-CCR8 antibodies lack specificity, which does not allow for cell sorting, at least in our hands.” or Pease, Biochem J (2011): “The latter has been problematic due to the lack of seemingly reliable antibodies against human CCR8. For example, in a study examining CCR8 expression in a CD4+CD25+ Treg population, CCR8 surface staining was undetectable using commercially available antibodies, despite these cells clearly expressing functional CCR8 as assessed by CCL1-driven microfilament polymerization.” (cf. Xing, Xiaoming, et al. "Expression of the chemokine receptor gene, CCR8, is associatedWith DUSP22 rearrangements in anaplastic large cell lymphoma. Appliedimmunohistochemistry&molecular morphology: AIMM/official publication of the Society for Applied Immunohistochemistry 23.8(2015):580; Chenivesse, Cécile, et al. Pulmonary CCL18 recruits human regulatory T cells. "The Journal of Immunology 189.1 (2012): 128-137.; and Pease, James E. "Targeting chemokinereceptors in allergic disease." Biochemical Journal 434.1 (2011): 11-24.).
表3.1列出了三种经过分析的市售抗体,它们在发明人手中并未特异性染色CCR8(参见图3)。大鼠IgG2B克隆#191704(MAB1429,R&D systems)未显示人CCR8的特异性结合,这也与WO2007044756的实施例6中描述的观察结果一致。Abcam E77显示出非常微弱的信号和高背景(数据未显示)。MM0068-4G19(Abcam)、191704(R&D Systems)、4G 19(Bioaol(Genetex))以及11n24和10k39(均为antikoerper-online.de)在发明人手中未显示出与人CCR8的特异性结合。Table 3.1 lists three commercially available antibodies that were analyzed but did not specifically stain CCR8 in the inventors' hands (see Figure 3). Rat IgG2B clone #191704 (MAB1429, R&D Systems) did not show specific binding to human CCR8, consistent with the observations described in Example 6 of WO2007044756. Abcam E77 showed a very weak signal and high background (data not shown). MM0068-4G19 (Abcam), 191704 (R&D Systems), 4G 19 (Bioaol (Genetex)), and 11n24 and 10k39 (all from antikoerper-online.de) did not show specific binding to human CCR8 in the inventors' hands.
表3.1:选择的现有技术抗体,cf.图3.Table 3.1: Selected existing technology antibodies, cf. Figure 3.
发明人在现有技术中仅发现两种可靠的特异性结合人CCR8的单克隆抗体:ICOS开发并最初公开于WO2007044756的克隆433H和Biolegend提供和销售的L263G8。两种抗体都是使用过表达人CCR8的细胞作为免疫原产生的。L263G8不与鼠CCR8发生交叉反应,并且不与BW5147.3细胞或转染有mCCR8的HEK 293T细胞中的鼠CCR8结合。The inventors have discovered only two reliable monoclonal antibodies that specifically bind to human CCR8 in the prior art: clone 433H, developed by ICOS and initially disclosed in WO2007044756, and L263G8, supplied and marketed by Biolegend. Both antibodies are produced using cells overexpressing human CCR8 as immunogens. L263G8 does not cross-react with mouse CCR8 and does not bind to mouse CCR8 in BW5147.3 cells or HEK 293T cells transfected with mCCR8.
单克隆大鼠IgG2b,κ抗小鼠CCR8克隆SA214G2(Biolegend目录号150302)对表达鼠CCR8的BW5147.4细胞染色呈阳性。该抗体是基于转染鼠CCR8的细胞产生的。Monoclonal rat IgG2b,κ anti-mouse CCR8 clone SA214G2 (Biolegend catalog number 150302) showed positive staining on BW5147.4 cells expressing mouse CCR8. This antibody was produced based on cells transfected with mouse CCR8.
总之,特异性识别人CC趋化因子受体的抗体对于该目标类别的一些成员来说是罕见的。低比率与针对人趋化因子受体的出售的其他市售抗体的结果一致。In summary, antibodies that specifically recognize the human CC chemokine receptor are rare for some members of this target class. This low rate is consistent with results from other commercially available antibodies targeting the human chemokine receptor.
实施例4:CC和CXC趋化因子受体的抗原Example 4: Antigens of CC and CXC chemokine receptors
因为关于酪氨酸硫酸化的文献不完整且部分矛盾(例如在物种之间),发明人使用各种可用的工具、文献搜索和自己的经验来预测硫酸化位点。表4.1总结了适合作为抗原以获得针对各个趋化因子受体的改进抗体的所得多肽。这些抗原已成功用于抗体产生,例如如随后的实施例所示,作为抗原或用于脱靶淘选。通过应用根据Monigatti F.et al.(Monigatti,Flavio,et al.″The Sulfinator:predicting tyrosine sulfation sitesin protein sequences.″Bioinformatics 18.5(2002):769-770.)的算法用55的E-截止值确认了带下划线的硫酸化位点。这些序列以前都没有包含在隐马尔可夫模型的训练集中。Because the literature on tyrosine sulfation is incomplete and partially contradictory (e.g., across species), the inventors used a variety of available tools, literature searches, and their own experience to predict sulfation sites. Table 4.1 summarizes the resulting peptides suitable as antigens to obtain improved antibodies against various chemokine receptors. These antigens have been successfully used for antibody production, for example, as shown in the following examples, either as antigens or for off-target screening. The underlined sulfation sites were confirmed with an E-cutoff value of 55 by applying the algorithm according to Monigatti F. et al. (Monigatti, Flavio, et al. "The Sulfinator: predicting tyrosine sulfation sites in protein sequences." Bioinformatics 18.5 (2002): 769-770.). These sequences were not previously included in the training set of the Hidden Markov Model.
括号中酪氨酸的硫酸化可以省略。对于人CCR3和人CCR8,预测Y172和Y353分别有另外的硫酸化位点。对于猴CCR3和猴CCR2,预测Y172和Y188分别有另外的硫酸化位点。以粗体显示的硫酸化位点先前已在文献中描述过(cf.Liu,Justin,et al.″Tyrosinesulfation is prevalent in human chemokine receptors import ant in lungdisease.″American j ournal of respiratory cell and molecular biology 38.6(2008):738-743;Millard;Christopher J.,et al.″Structural basis of receptorsulfotyrosine recognition by a CC chemokine:the N-terminal region of CCR3bound to CCL11/eotaxin-1.″Structure 22.11(2014):1571-1581)。The sulfation of tyrosine residues in parentheses can be omitted. For human CCR3 and human CCR8, additional sulfation sites are predicted for Y172 and Y353, respectively. For monkey CCR3 and monkey CCR2, additional sulfation sites are predicted for Y172 and Y188, respectively. The sulfation sites shown in bold have been previously described in the literature (cf. Liu, Justin, et al. "Tyrosine sulfation is prevalent in human chemokine receptors important ant in lung disease." American Journal of Respiratory Cell and Molecular Biology 38.6 (2008): 738-743; Millard; Christopher J., et al. "Structural basis of receptor sulfotyrosine recognition by a CC chemokine: the N-terminal region of CCR3 bound to CCL11/eotaxin-1." Structure 22.11 (2014): 1571-1581).
多肽设计Peptide design
CCR8的N端由人和食蟹猴CCR8全长蛋白中的第1至35位氨基酸以及小鼠CCR8全长蛋白中的第1至33位氨基酸形成。N端由以半胱氨酸连接的TRD(人和食蟹猴CCR8的氨基酸1-24和小鼠CCR8的氨基酸1-22)和LID结构域(人和食蟹猴CCR8的氨基酸26-35和小鼠CCR8的氨基酸24-33)组成。对于包含N端的多肽的合成,将半胱氨酸替换为丝氨酸以避免肽聚集。表5.1显示了用于通过如实施例6中所述的噬菌体展示淘选产生抗CCR8抗体的多肽的各自ID。为了测试蛋白质的翻译后修饰是否导致抗体产生困难,使用未修饰或硫酸化的包含TRD和/N端序列的肽。在食蟹猴和人CCR8的TRD的至少50%的酪氨酸上引入了硫酸化,例如在相应肽的位置3、15和17上。对于小鼠TRD和N端肽,在相应肽的第3、14和15位酪氨酸上引入硫酸化(参见表6.1)。此外,包含通过引入C端生物素化进行工程化的LID的肽,所述生物素化通过TTDS(三氧杂十三烷-琥珀酰胺酸)接头连接。也可以使用其他标签和接头。TRD或N端的肽通过引入由TTDS-赖氨酸接头连接的N端生物素化进行修饰。同样,另外已知的接头和/或标签同样可以用于促进肽的固定。The N-terminus of CCR8 is formed by amino acids 1 to 35 of the full-length human and cynomolgus monkey CCR8 protein and amino acids 1 to 33 of the full-length mouse CCR8 protein. The N-terminus consists of a TRD (amino acids 1-24 of human and cynomolgus monkey CCR8 and amino acids 1-22 of mouse CCR8) linked by cysteine residues and an LID domain (amino acids 26-35 of human and cynomolgus monkey CCR8 and amino acids 24-33 of mouse CCR8). For the synthesis of peptides containing the N-terminus, cysteine residues are replaced with serine residues to avoid peptide aggregation. Table 5.1 shows the respective IDs of the peptides used to generate anti-CCR8 antibodies via phage display panning as described in Example 6. To test whether post-translational modifications of the protein lead to difficulties in antibody production, unmodified or sulfated peptides containing the TRD and/or N-terminal sequence were used. Sulfation was introduced on at least 50% of the tyrosine residues of the TRD in cynomolgus monkey and human CCR8, for example at positions 3, 15, and 17 of the corresponding peptides. For mouse TRD and N-terminal peptides, sulfation is introduced at tyrosine residues 3, 14, and 15 of the corresponding peptides (see Table 6.1). Additionally, peptides containing LIDs engineered by introducing C-terminal biotinylation linked via a TTDS (trioxadecane-succinamide) linker are also included. Other tags and linkers can also be used. TRD or N-terminal peptides are modified by introducing N-terminal biotinylation linked by a TTDS-lysine linker. Similarly, other known linkers and/or tags can also be used to facilitate peptide immobilization.
为了测试蛋白质的翻译后修饰是否导致抗体产生困难,使用未修饰或硫酸化的包含TRD和/N端序列的肽。在食蟹猴和人CCR8的TRD的至少50%的酪氨酸上引入了硫酸化,例如在相应肽的位置3、15和17上。对于小鼠TRD和N端肽,在相应肽的第3、14和15位酪氨酸上引入硫酸化(参见表6.1)。此外,包含通过引入C端生物素化进行工程化的LID的肽,所述生物素化通过TTDS(三氧杂十三烷-琥珀酰胺酸)接头连接。也可以使用其他标签和接头。TRD或N端的肽通过引入由TTDS-赖氨酸接头连接的N端生物素化进行修饰。同样,另外已知的接头和/或标签同样可以用于促进肽的固定。To test whether post-translational modifications of proteins lead to difficulties in antibody production, unmodified or sulfated peptides containing TRD and/or N-terminal sequences were used. Sulfation was introduced on at least 50% of the tyrosine residues of the TRD in cynomolgus monkeys and human CCR8, for example, at positions 3, 15, and 17 of the corresponding peptide. For mouse TRDs and N-terminal peptides, sulfate was introduced on tyrosine residues 3, 14, and 15 of the corresponding peptide (see Table 6.1). Additionally, peptides containing LIDs engineered by introducing C-terminal biotinylation linked via a TTDS (trioxadecane-succinamide) linker were also used. Other tags and linkers can also be used. TRD or N-terminal peptides are modified by introducing N-terminal biotinylation linked by a TTDS-lysine linker. Similarly, other known linkers and/or tags can also be used to facilitate peptide immobilization.
多肽合成Peptide synthesis
肽可以从不同的商业来源获得并且可以如本领域已知的那样制备,例如使用标准的Fmoc固相肽合成(SPPS)化学。硫酸化肽的有效合成在技术上具有挑战性,因为酪氨酸硫酸化肽在碱性条件下是稳定的,而磺基酪氨酸在酸性条件下会发生脱硫作用,这使得简单地将FmocTyr(SO3Na)OH逐步掺入生长的肽中是不合适的。肽的整体硫酸化是可能的,例如使用三氧化硫-吡啶,但不允许对选定的酪氨酸进行特定硫酸化。然而,基于Fmoc的SSPS仍可用于合成硫酸化肽。为此,正交保护的酪氨酸衍生物如氟硫酸化酪氨酸、叠氮甲基保护的酪氨酸或新戊基保护的酪氨酸可用于掺入。受保护的酪氨酸可以随后以选择性和定量的方式被揭露。Peptides are available from various commercial sources and can be prepared as is known in the art, for example using standard Fmoc solid-phase peptide synthesis (SPPS) chemistry. The efficient synthesis of sulfated peptides is technically challenging because tyrosine sulfated peptides are stable under alkaline conditions, while sulfotyrosine undergoes desulfurization under acidic conditions, making it unsuitable to simply incorporate FmocTyr(SO3Na)OH stepwise into the grown peptide. Whole-scale sulfation of the peptide is possible, for example using sulfur trioxide-pyridine, but specific sulfation of selected tyrosines is not permitted. However, Fmoc-based SSPS can still be used to synthesize sulfated peptides. For this purpose, orthogonally protected tyrosine derivatives such as fluorosulfated tyrosine, azidomethyl-protected tyrosine, or neopentyl-protected tyrosine can be used for incorporation. The protected tyrosine can then be revealed selectively and quantitatively.
Chen等,Angew Chem,2016报道了Fmoc-氟硫酸化酪氨酸的一步合成。然后引入了一种有效的Fmoc固相肽合成策略,用于将氟硫酸化酪氨酸残基掺入目标肽中。标准的同时肽树脂裂解和酸不稳定侧链保护基团的去除提供了含有氟硫酸化酪氨酸的粗肽。碱性乙二醇作为溶剂和反应物将氟硫酸化酪氨酸肽高产率地转化为磺基酪氨酸肽。Chen et al., Angew Chem, 2016, reported a one-step synthesis of Fmoc-fluorosulfated tyrosine. An efficient Fmoc solid-phase peptide synthesis strategy was then introduced to incorporate fluorosulfated tyrosine residues into the target peptide. Standard simultaneous peptide resin cleavage and removal of acid-labile side-chain protecting groups provided crude peptides containing fluorosulfated tyrosine. Basic ethylene glycol was used as both solvent and reactant to convert the fluorosulfated tyrosine peptide to sulfotyrosine peptides in high yield.
产生的肽可以随后如本领域已知的那样纯化,例如通过HPLC,例如在BEH C-18(Waters)或Kinetex C-18(Phenomenex)色谱柱上,可以通过质谱法(IonSpray和正离子检测器)进行分析,例如用于质量控制。The resulting peptides can then be purified as is known in the art, for example by HPLC, such as on a BEH C-18 (Waters) or Kinetex C-18 (Phenomenex) column, and analyzed by mass spectrometry (IonSpray and positive ion detector), for example for quality control.
在文献中,全长人CCR8蛋白中的两个二硫桥已被描述为通过位置106和183上的半胱氨酸连接细胞外环1(ECL1)和细胞外环2(ECL2)。半胱氨酸25和272之间的另一个二硫键被假设将第7个跨膜螺旋与N端连接起来。然而,预期实施例的肽不会在半胱氨酸之间形成任何二硫键。In the literature, the two disulfide bridges in the full-length human CCR8 protein have been described as connecting extracellular loop 1 (ECL1) and extracellular loop 2 (ECL2) via cysteine residues at positions 106 and 183. Another disulfide bond between cysteine residues 25 and 272 is hypothesized to connect the 7th transmembrane helix to the N-terminus. However, the peptides of the anticipated embodiments do not form any disulfide bonds between cysteine residues.
实施例6:噬菌体展示和人抗CCR8抗体筛选Example 6: Phage display and screening of human anti-CCR8 antibodies
全人抗体噬菌体展示文库(BioInvent n-CoDeR Fab入文库)用于通过针对可溶性生物素化肽的选择来分离人单克隆抗体。肽由Pepscan提供。肽的合成如实施例5中所述进行。对于淘选程序应用以下方案。A fully human antibody phage display library (BioInvent n-CoDeR Fab library) was used to isolate human monoclonal antibodies by selection against soluble biotinylated peptides. The peptides were provided by Pepscan. Peptide synthesis was performed as described in Example 5. The following protocol was applied for the panning process.
表6.1:包括用于通过噬菌体展示和ELISA筛选进行抗体选择的修饰的肽的列表。Table 6.1: List of modified peptides used for antibody selection via phage display and ELISA screening.
链霉偶联的Dynabeads M-280(InvitrogenTM)在室温(RT)下分别用生物素化肽(1管)和生物素化脱靶肽(3管)包被一小时。洗涤Dynabeads,随后在室温下以端对端旋转封闭1小时。Streptomyces-conjugated Dynabeads M-280 (Invitrogen ™ ) were coated with biotinylated peptides (1 tube) and biotinylated off-target peptides (3 tubes) for one hour at room temperature (RT). The Dynabeads were washed and then blocked end-to-end by spin-coating at room temperature for one hour.
为了去除脱靶结合物,将封闭的噬菌体文库添加到封闭的脱靶加载的Dynabeads中,并在室温下以端对端旋转孵育10分钟。该去除步骤重复2次。将去除过的噬菌体文库添加到封闭的靶标加载的Dynabeads中,并在RT下端对端旋转孵育60分钟。To remove off-target bindings, a blocked phage library was added to blocked off-target loaded Dynabeads and incubated end-to-end at room temperature for 10 minutes. This removal step was repeated twice. The removed phage library was then added to blocked target loaded Dynabeads and incubated end-to-end at RT for 60 minutes.
严格洗涤后(3次封闭缓冲液(PBS-T,3%奶粉)和9次PBS-T(150mM NaCl;8mMNa2HPO4;1.5mM KH2PO4;调整至pH=7.4-7.6,0.05%Tween-20)),带有Fab-噬菌体特异性结合包被靶标的Dynabeads被直接用于感染大肠杆菌菌株HB101。随后使用M13KO7辅助噬菌体(Invitrogen)在大肠杆菌菌株HB101中扩增噬菌体。After rigorous washing (3 times with blocking buffer (PBS-T, 3% milk powder) and 9 times with PBS-T (150mM NaCl; 8mM Na2HPO4; 1.5mM KH2PO4; adjusted to pH 7.4-7.6, 0.05% Tween-20), Dynabeads carrying the Fab-phage-specific binding target were directly used to infect Escherichia coli strain HB101. The phage was then amplified in E. coli strain HB101 using the M13KO7 helper phage (Invitrogen).
在接下来的选择轮次中,靶标浓度降低以增加高亲和力结合物的选择压力。在文库淘选期间,执行了两种不同的选择策略(图4)。该策略旨在鉴定对包含TRD的人CCR8 N端区和/或包含TRD的食蟹猴CCR8 N端区域表现出结合活性的抗体。用作抗原或用于脱靶淘选的所有肽至少在一个位置被硫酸化,参见表4.1和表6.1。In subsequent selection rounds, the target concentration was reduced to increase the selection pressure on high-affinity conjugates. Two different selection strategies were implemented during library panning (Figure 4). This strategy aimed to identify antibodies exhibiting binding activity against the N-terminal region of human CCR8 containing TRD and/or the N-terminal region of cynomolgus monkey CCR8 containing TRD. All peptides used as antigens or for off-target panning were sulfated at at least one position, see Tables 4.1 and 6.1.
对于这两种策略,加入使用包含TRD(TPP-14829,SEQ ID NO:22,Y22被硫酸化)作为脱靶肽的生物素化人CCR4 N端区的去除步骤。For both strategies, a removal step using biotinylated human CCR4 N-terminal region containing TRD (TPP-14829, SEQ ID NO: 22, Y22 is sulfated) as an off-target peptide is added.
策略I包括对人CCR8 N端硫酸化肽(TPP-14827,SEQ ID NO:46,Y3、Y15、Y17被硫酸化)进行第一轮淘选,然后对同一肽(TPP-14827,SEQ ID NO:46,Y3、Y15、Y17被硫酸化)或在食蟹猴CCR8 N端,硫酸化肽(TPP-14828,SEQ ID NO:47,Y3、Y15、Y17被硫酸化)上进行3论淘选。Strategy I involves a first round of panning on the N-terminal sulfated peptide of human CCR8 (TPP-14827, SEQ ID NO: 46, Y3, Y15, Y17 are sulfated), followed by a third round of panning on the same peptide (TPP-14827, SEQ ID NO: 46, Y3, Y15, Y17 are sulfated) or on the N-terminal sulfated peptide of cynomolgus monkey CCR8 (TPP-14828, SEQ ID NO: 47, Y3, Y15, Y17 are sulfated).
策略II包括对食蟹猴CCR8 N端,硫酸化肽(TPP-14828,SEQ ID NO:47,Y3、Y15、Y17被硫酸化)进行第一轮淘选,然后对同一肽(TPP-14828,SEQ ID NO:47,Y3、Y15、Y17被硫酸化)或人CCR8 N端,硫酸化肽(TPP-14827,SEQ ID NO:46,Y3、Y15、Y17被硫酸化)进行3轮淘选,如图4所示。Strategy II involves a first round of panning for cynomolgus monkey CCR8 N-terminal sulfated peptides (TPP-14828, SEQ ID NO: 47, Y3, Y15, and Y17 are sulfated), followed by three rounds of panning for the same peptide (TPP-14828, SEQ ID NO: 47, Y3, Y15, and Y17 are sulfated) or human CCR8 N-terminal sulfated peptides (TPP-14827, SEQ ID NO: 46, Y3, Y15, and Y17 are sulfated), as shown in Figure 4.
对于第一次定性评估,对每个克隆库进行了88个随机挑选的噬菌体上Fab(Fab-on-phage)克隆的单克隆培养和表达,随后测试了克隆与先前用于淘选的各个靶标的结合。此外,通过流式细胞术(FACS)确定与人和食蟹猴CCR8表达细胞的结合。For the initial qualitative evaluation, 88 randomly selected phage-on-phage clones from each clone library were cultured and expressed as monoclonal samples, and binding to the clones with the various targets previously used for panning was then tested. Furthermore, binding to human and cynomolgus monkey CCR8-expressing cells was determined by flow cytometry (FACS).
特定结合物在特定上下文中被定义为分子显示Certain conjugates are defined as molecular displays in a specific context.
(i)在ELISA测定中,靶标的信号强度比脱靶信号强度高至少10倍,(i) In ELISA assays, the signal intensity of the target is at least 10 times higher than the off-target signal intensity.
(ii)在FACS测定中,表达CCR8的细胞系的信号比不表达CCR8的对照细胞系的信号高至少2倍,并且(ii) In FACS assays, the signal of cell lines expressing CCR8 was at least 2-fold higher than that of control cell lines not expressing CCR8, and
(iii)在FACS测定中,对照细胞系上的信号小于10000。(iii) In FACS assays, the signal on the control cell line is less than 10,000.
来自12个库的在两个测定的至少一个中具有显著命中率的质粒被提交进行基因III去除,并在高通量ELISA和FACS筛选中筛选得到可溶性Fab。Plasmids from 12 libraries that showed significant hit rates in at least one of the two assays were submitted for gene III removal and screened for soluble Fab in high-throughput ELISA and FACS screening.
实施例7:人抗人CCR8抗体的高通量筛选Example 7: High-throughput screening of human anti-human CCR8 antibodies
从噬菌体展示期间产生的12个克隆库中,通过ELISA(HTS-ELISA)在高通量筛选中筛选了17000个不同的sFab克隆,以确定它们与先前用于噬菌体展示淘选的肽的结合,即(i)TPP-14827,SEQ ID NO:46,Y3、Y15、Y17被硫酸化,(ii)TPP-14828,SEQ ID NO:47,Y3、Y15、Y17被硫酸化,以及(iii)相应的脱靶肽TPP-14829,SEQ ID NO:22,Y22被硫酸化。对于ELISA筛选,在4℃的涂覆缓冲液(Carbonat-Basis,Candor 121125)中以浓度O.1μg/ml将肽固定在链霉素涂覆的板(Greiner bio-one 781997)上。用60μl PBS 0.05%Tween洗涤板3次并用50μl Smart(Candor113500)在20℃下封闭1小时后,将10μl sFab样品添加到板中并在20℃下孵育1小时。随后用60μl PBS 0.05%Tween洗涤3次后,加入20μl抗c-Myc HRP抗体,20℃孵育1h,随后用60μl PBS 0.05%Tween洗涤3次,加入20μl Amplex Red溶液(Invitrogen A12222,1∶1000在NaP缓冲液50mM pH7.6中,含1∶10000的30%H2O2)。在20℃下最终孵育20分钟后,使用595nm的发射波长和530nm的激发波长确定信号。为了分析,使用单个sFab克隆的信号与背景比,而背景由不包含任何sFab培养物但包含相应的样品培养基的每个板上的48个孔的平均值定义。From 12 clone libraries generated during phage display, 17,000 distinct sFab clones were screened in high-throughput screening using ELISA (HTS-ELISA) to determine their binding to peptides previously used for phage display panning: (i) TPP-14827, SEQ ID NO: 46, Y3, Y15, Y17 sulfated; (ii) TPP-14828, SEQ ID NO: 47, Y3, Y15, Y17 sulfated; and (iii) the corresponding off-target peptide TPP-14829, SEQ ID NO: 22, Y22 sulfated. For ELISA screening, the peptides were immobilized at a concentration of 0.1 μg/ml in coating buffer (Carbonat-Basis, Candor 121125) at 4°C on streptomycin-coated plates (Greiner bio-one 781997). After washing the plate three times with 60 μl PBS 0.05% Tween and blocking it for 1 hour at 20 °C with 50 μl Smart (Candor 113500), 10 μl of sFab sample was added to the plate and incubated at 20 °C for 1 hour. Following this, the plate was washed three times with 60 μl PBS 0.05% Tween, and 20 μl of anti-c-Myc HRP antibody was added. The plate was incubated at 20 °C for 1 hour, then washed three times with 60 μl PBS 0.05% Tween, and 20 μl of Amplex Red solution (Invitrogen A12222, 1:1000 in 50 mM NaP buffer, pH 7.6, containing 1:10000 of 30% H2O2) was added. After a final incubation of 20 minutes at 20 °C, the signal was determined using an emission wavelength of 595 nm and an excitation wavelength of 530 nm. For analysis, the signal-to-background ratio of a single sFab clone was used, with the background defined by the average of 48 wells on each plate that did not contain any sFab culture but contained the corresponding sample culture medium.
总共2193个不同的sFab克隆显示与人和食蟹猴N端硫酸化肽TPP-14827(SEQ IDNO:46,Y3、Y15、Y17被硫酸化)和TPP-14828(SEQ ID NO:47,Y3、Y15、Y17被硫酸化)两者的显著结合,如大于5的信号背景比所示,同时未显示与脱靶TPP-14829(SEQ ID NO:22,Y22被硫酸化)有任何显著结合。这些sFab克隆被重新构建为全长人IgG1抗体,并应用于人和食蟹猴CCR8表达细胞系的FACS筛选。A total of 2193 different sFab clones showed significant binding to both human and cynomolgus monkey N-terminal sulfated peptides TPP-14827 (SEQ ID NO: 46, Y3, Y15, Y17 sulfated) and TPP-14828 (SEQ ID NO: 47, Y3, Y15, Y17 sulfated), as indicated by a signal-to-background ratio greater than 5, while no significant binding was shown to off-target TPP-14829 (SEQ ID NO: 22, Y22 sulfated). These sFab clones were reconstructed into full-length human IgG1 antibodies and used for FACS screening of human and cynomolgus monkey CCR8-expressing cell lines.
基于与食蟹猴和人CCR8表达细胞两者的结合,以及未显示与不表达CCR8的亲本细胞系有任何显著的非特异性结合,选择十个抗体克隆用于产生和进一步表征。这些初始命中是TPP-17575至TPP-17581和TPP-18205至TPP-18207,CDR显示在表7.1中。进一步手动优化抗体以用于治疗而产生表7.2a和表7.2b中所示的抗体组,还参见序列表。Based on binding to both cynomolgus monkey and human CCR8-expressing cells, and the absence of significant nonspecific binding to parental cell lines that do not express CCR8, ten antibody clones were selected for generation and further characterization. These initial hits were TPP-17575 to TPP-17581 and TPP-18205 to TPP-18207, and CDRs are shown in Table 7.1. Further manual optimization of the antibodies for therapeutic use resulted in the antibody sets shown in Tables 7.2a and 7.2b, see also the sequence listing.
此外,为了获得抗体TPP-27495,TPP-23411的序列被工程化为包含YTE突变M252Y、S254T和T256E。TPP-27495是70%无岩藻糖基化的。Furthermore, to obtain the antibody TPP-27495, the sequence of TPP-23411 was engineered to include the YTE mutations M252Y, S254T, and T256E. TPP-27495 is 70% fucosylated-free.
此外,为了获得抗体TPP-27496,TPP-23411的序列被工程化为包含LS突变M428L和N434S。TPP-27496是70%无岩藻糖基化的。Furthermore, to obtain the antibody TPP-27496, the sequence of TPP-23411 was engineered to include the LS mutations M428L and N434S. TPP-27496 is 70% fucosylated-free.
实施例8:抗鼠CCR8抗体的产生Example 8: Production of anti-mouse CCR8 antibody
噬菌体展示和抗体筛选Phage display and antibody screening
全人抗体噬菌体展示文库(BioInvent n-CoDeR Fab lambda文库)用于通过选择可溶性生物素化肽来分离识别鼠CCR8的人单克隆抗体。肽由Pepscan提供。如本文其他处所述进行肽的合成。对于淘选程序,应用以下方案。A fully human antibody phage display library (BioInvent n-CoDeR Fab lambda library) was used to isolate human monoclonal antibodies recognizing mouse CCR8 by selecting soluble biotinylated peptides. The peptides were provided by Pepscan. Peptide synthesis was performed as described elsewhere in this document. The following protocol was used for the panning process.
链霉素偶联的Dynabeads M-280(InvitrogenTM)在室温(RT)下分别用生物素化肽(1管)和生物素化脱靶肽(3管)包被一小时。洗涤Dynabeads,随后在室温下以端对端旋转封闭1小时。为了去除脱靶结合物,将封闭的噬菌体文库添加到封闭的脱靶加载的Dynabeads中,并在室温下以端对端旋转孵育10分钟。该去除步骤重复2次。将去除过的噬菌体文库添加到封闭的靶标加载的Dynabeads中,并在RT下端对端旋转孵育60分钟。Streptomycin-conjugated Dynabeads M-280 (Invitrogen ™ ) were coated with biotinylated peptides (1 tube) and biotinylated off-target peptides (3 tubes) for one hour at room temperature (RT). The Dynabeads were washed and then blocked end-to-end by rotation at room temperature for 1 hour. To remove off-target conjugates, a blocked phage library was added to the blocked off-target loaded Dynabeads and incubated end-to-end by rotation at room temperature for 10 minutes. This removal step was repeated twice. The removed phage library was then added to the blocked target loaded Dynabeads and incubated end-to-end by rotation at RT for 60 minutes.
严格洗涤后(3次封闭缓冲液(PBS-T,3%奶粉)和9次PBS(150mM NaCl;8mMNa2HPO4;1.5mM KH2PO4;调整至pH=7.4-7.6)和0.05%Tween-20)),带有Fab-噬菌体特异性结合包被靶标的Dynabeads被直接用于感染大肠杆菌菌株HB101。随后使用M13KO7辅助噬菌体(InvitrogenTM)在大肠杆菌菌株HB101中扩增噬菌体。After rigorous washing (3 times with blocking buffer (PBS-T, 3% milk powder) and 9 times with PBS (150mM NaCl; 8mM Na2HPO4; 1.5mM KH2PO4; adjusted to pH 7.4-7.6) and 0.05% Tween-20), Dynabeads carrying Fab-phage-specific binding targets were directly used to infect Escherichia coli strain HB101. The phage was then amplified in E. coli strain HB101 using the M13KO7 helper phage (Invitrogen ™ ).
在接下来的选择轮次中,靶标浓度降低以增加高亲和力结合物的选择压力。In subsequent selection rounds, the target concentration is reduced to increase the selection pressure on high-affinity binders.
为了生成结合小鼠CCR8的抗体,设计了一种选择策略来鉴定对N端区域内的小鼠CCR8富含酪氨酸的结构域(TRD)表现出结合活性的抗体。对于小鼠CCR8 TRD肽的阳性选择,使用含有50%正常肽和50%硫酸化肽的混合物(Seq ID NO:45非硫酸化(TPP-13792)或Y3、Y14、Y15被硫酸化(TPP-13793))。包含使用生物素化的脱靶肽N端区域内的人CCR4 TRD的去除步骤。此外,对硫酸化和非硫酸化肽的混合物(Seq ID No:19非硫酸化(TPP-13799)或Y19和Y22被硫酸化(TPP-13800))进行人CCR4的去除步骤。To generate antibodies binding to mouse CCR8, a selection strategy was designed to identify antibodies exhibiting binding activity against the tyrosine-rich domain (TRD) of mouse CCR8 in the N-terminal region. For positive selection of mouse CCR8 TRD peptides, a mixture containing 50% normal peptide and 50% sulfated peptide was used (Seq ID No: 45 non-sulfated (TPP-13792) or Y3, Y14, Y15 sulfated (TPP-13793)). A removal step involving the human CCR4 TRD in the N-terminal region of the off-target peptide was also included. Furthermore, a human CCR4 removal step was performed on a mixture of sulfated and non-sulfated peptides (Seq ID No: 19 non-sulfated (TPP-13799) or Y19 and Y22 sulfated (TPP-13800)).
淘选策略是总共进行四轮淘选,每轮针对指定的硫酸化和非硫酸化肽混合物,见图5。The screening strategy involves a total of four rounds of screening, each round targeting a specified mixture of sulfated and non-sulfated peptides, as shown in Figure 5.
对于每个克隆库进行了88个随机挑选的噬菌体上Fab(Fab-on-phage)克隆的单克隆培养和表达,随后测试了克隆与先前用于淘选的相应靶标的结合。然而,对硫酸化和非硫酸化肽进行了单独的ELISA测量。For each cloning library, 88 randomly selected phage-on-phage Fab clones were cultured and expressed as monoclonal samples, and binding of the clones to the corresponding targets previously used for panning was then tested. However, sulfated and non-sulfated peptides were measured separately by ELISA.
此外,通过流式细胞术(FACS)确定与表达人、小鼠和食蟹猴CCR8的细胞的结合。Furthermore, the binding to cells expressing human, mouse, and cynomolgus monkey CCR8 was determined by flow cytometry (FACS).
特定结合物在特定上下文中被定义为分子显示Certain conjugates are defined as molecular displays in a specific context.
(i)在ELISA测定中,靶标的信号强度比脱靶信号强度高至少10倍,并且(i) In ELISA assays, the target signal intensity is at least 10 times higher than the off-target signal intensity, and
(ii)在FACS测定中,表达CCR8的细胞系的信号比不表达CCR8的对照细胞系的信号高至少10倍。(ii) In FACS assays, the signal of cell lines expressing CCR8 was at least 10 times higher than that of control cell lines not expressing CCR8.
在这些测量中,抗体TPP-14095和TPP-14099被鉴定为与小鼠CCR8表达细胞结合,但不与对照细胞、表达人CCR8的对照细胞或表达食蟹猴CCR8的对照细胞结合。此外,发现抗体与硫酸化TRD肽结合,但不与非硫酸化肽结合。In these measurements, antibodies TPP-14095 and TPP-14099 were identified as binding to mouse CCR8-expressing cells, but not to control cells, human CCR8-expressing control cells, or cynomolgus monkey CCR8-expressing control cells. Furthermore, the antibodies were found to bind to sulfated TRD peptides, but not to non-sulfated peptides.
实施例9:CCR8抗体的结构表征Example 9: Structural characterization of CCR8 antibody
在六个CDR环中,H3环显示出最大的结构多样性并且位于结合位点的中心。它还通过亲和力成熟获得最多的突变,平均与抗原的接触次数最多。因此,它在抗原结合中起着至关重要的作用。Among the six CDR rings, the H3 ring exhibits the greatest structural diversity and is located at the center of the binding site. It also acquires the most mutations through affinity maturation and has the highest average number of contacts with the antigen. Therefore, it plays a crucial role in antigen binding.
通过分析前面实施例中获得的抗体的具体结构,令人惊讶地发现HCDR3的组成在结构上不同于通常的人HCDR3结构域。更详细地说,人抗人CCR8抗体的HCDR3结构域的酪氨酸残基数量明显高于对具有匹配长度的随机全人HCDR3的预期(~10%,参见Zemlin,Michael,et al.″Expressed murine and human HCDR3 intervals of equal lengthexhibit distinct repertoires that differ in their amino acid composition andpredicted range of structures.″Journal of molecular biology 334.4(2003):733-749)。Analysis of the specific structures of the antibodies obtained in the preceding examples revealed a surprising structural difference between the HCDR3 domain and the typical human HCDR3 domain. More specifically, the number of tyrosine residues in the HCDR3 domain of the human anti-human CCR8 antibody was significantly higher than expected for a random whole-human HCDR3 of matching length (~10%, see Zemlin, Michael, et al. "Expressed murine and human HCDR3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures." Journal of Molecular Biology 334.4 (2003): 733-749).
这些数据表明酪氨酸的存在对特异性结合硫酸化抗原具有有益影响。优化抗体的特征还在于组氨酸频率的显著增加。对于这些抗体,组氨酸含量平均为10%。匹配长度的HCDR3中组氨酸的平均出现率在鼠HCDR3中约为2%,在人HCDR3中甚至更低,参见Zemlin,Michael,et al.(2003)。These data suggest that the presence of tyrosine has a beneficial effect on the specific binding of sulfated antigens. The optimized antibodies are also characterized by a significant increase in histidine frequency. For these antibodies, the average histidine content is 10%. The average occurrence of histidine in matched-length HCDR3 is approximately 2% in mouse HCDR3 and even lower in human HCDR3; see Zemlin, Michael, et al. (2003).
因为用于选择的抗原的特征在于以硫酸化酪氨酸和带负电荷的氨基酸形式提供的负电荷,发明人假设HCDR3中正电荷的出现提高了与硫酸化抗原的结合,但对于结合非硫酸化抗原是更不必需的。虽然最初获得的抗体组的HCDR3中带正电荷的残基(H、K、R)的频率约为7%,但改进后的抗体每个HCDR3平均具有15%的带正电荷氨基酸(例如高达约31%)。Because the antigens used for selection are characterized by a negative charge provided in the form of sulfated tyrosine and negatively charged amino acids, the inventors hypothesized that the presence of a positive charge in HCDR3 enhances binding to sulfated antigens, but is less necessary for binding to non-sulfated antigens. While the frequency of positively charged residues (H, K, R) in HCDR3 of the initially obtained antibody group was approximately 7%, the improved antibodies have an average of 15% positively charged amino acids per HCDR3 (e.g., up to approximately 31%).
根据本发明的抗体的特征在于酪氨酸频率高于通常的全人HCDR3。虽然这些高酪氨酸频率更容易用鼠CDR获得,但这可以解释为什么以前尝试获得特异性识别CC趋化因子受体如CCR8的人抗人抗体没有成功。The antibodies according to the invention are characterized by a higher tyrosine frequency than that of typical fully human HCDR3. While these high tyrosine frequencies are more readily obtained using mouse CDR, this may explain why previous attempts to obtain human anti-human antibodies that specifically recognize CC chemokine receptors such as CCR8 have been unsuccessful.
实施例10:抗CCR8抗体的功能表征Example 10: Functional characterization of anti-CCR8 antibody
细胞系cell lines
使用本领域已知的Inscreenex产生表达人、食蟹猴或小鼠CCR8的稳定HEK 293和CHO细胞系。胸腺细胞系Hut-78和淋巴瘤细胞系TALL-1从ATCC获得,并证实显示内源性CCR8表达。由于CCR8的表达可能不同,因此对表达水平进行了监测。Stable HEK 293 and CHO cell lines expressing human, cynomolgus monkey, or mouse CCR8 were generated using Inscreenex, a technology known in the art. The thymocyte cell line Hut-78 and the lymphoma cell line TALL-1 were obtained from ATCC and confirmed to show endogenous CCR8 expression. Because CCR8 expression can vary, expression levels were monitored.
人调节性T细胞Human regulatory T cells
FACS分选的来自健康供体PBMC的CD4+和CD25+细胞购自BioIVT、AllCells或StemCell Technologies。在解冻细胞并在培养物中恢复过夜后,按照Treg扩增试剂盒方案的指示,用来自Miltenyi的设计用于Treg扩增的抗CD3和抗CD28珠激活细胞,并补充IL-2(R&D Systems)。通常,在激活幼稚的PBMC后,CCR8的表达在第5-7天之间最高,并且细胞可以在初次激活后7-9天重新激活。再刺激后,CCR8表达在第2-4天之间最高。FACS-sorted CD4+ and CD25+ cells from healthy donor PBMCs were purchased from BioIVT, AllCells, or StemCell Technologies. After thawing and overnight recovery in culture, cells were activated with anti-CD3 and anti-CD28 beads from Miltenyi, designed for Treg amplification, following the Treg amplification kit protocol, and supplemented with IL-2 (R&D Systems). Typically, CCR8 expression peaks between days 5 and 7 after activation of immature PBMCs, and cells can be reactivated 7–9 days after initial activation. Following restimulation, CCR8 expression peaks between days 2 and 4.
实施例10.1.1:评估结合来自不同物种的CCR8的亲和力Example 10.1.1: Assessing the affinity for binding CCR8 from different species
FACS实验FACS Experiment
抗体对人、食蟹猴和鼠CCR8和其他趋化因子受体的亲和力通过本领域已知的FACS确定。简而言之,CHO细胞被工程化以表达来自各个物种的CCR8。或者,使用来自人类供体的激活的人Treg来确定抗体对激活的Treg的亲和力。EC50值由FACS确定。所有候选抗体不仅对人CCR8具有较高的亲和力,其EC50在低数纳摩尔范围内,而且对食蟹猴CCR8也具有相同数量级的较高的亲和力。这些物种中的相似亲和力对于促进研究以预测人类以后的安全问题非常重要。这是在免疫肿瘤学中寻找治疗性抗体的一个主要问题,因为小鼠模型在预测人类免疫学副作用方面有很大的局限性。对于表10.1.1.1中所示的本发明抗体,确定的结合人Treg的EC50在10和25nM之间。The affinity of the antibodies for human, cynomolgus monkey, and mouse CCR8 and other chemokine receptors was determined using FACS known in the art. Briefly, CHO cells were engineered to express CCR8 from the respective species. Alternatively, activated human Tregs from human donors were used to determine the antibody affinity for activated Tregs. EC50 values were determined by FACS. All candidate antibodies showed not only high affinity for human CCR8 with EC50s in the low nanomolar range, but also similarly high affinity for cynomolgus monkey CCR8. This similar affinity across these species is crucial for advancing research to predict future safety concerns in humans. This is a major challenge in the search for therapeutic antibodies in immuno-oncology, as mouse models have significant limitations in predicting immunological side effects in humans. For the antibodies of the present invention shown in Table 10.1.1.1, the determined EC50s for binding to human Tregs were between 10 and 25 nM.
本发明抗体在表达人CCR8的CHO细胞、表达食蟹猴CCR8的CHO细胞或激活的人Tregs(供体1)中的亲和力分别显示在图6、7和8中。The affinity of the antibody of the present invention in CHO cells expressing human CCR8, CHO cells expressing cynomolgus monkey CCR8, or activated human Tregs (donor 1) is shown in Figures 6, 7, and 8, respectively.
表10.1.1.1:以nM为单位的本发明抗体的EC50值。对稳定表达人CCR8或食蟹猴CCR8的CHO细胞,或对人激活的CD4+CD25+T细胞进行FACS染色。这些细胞用Miltenyi的Treg扩增试剂盒激活。Table 10.1.1.1: EC50 values of the antibodies of this invention in nM. FACS staining was performed on CHO cells stably expressing human CCR8 or cynomolgus monkey CCR8, or on activated human CD4+CD25+ T cells. These cells were activated using Miltenyi's Treg amplification kit.
抗体TPP-23411和TPP-21360因在重链的C端添加一个赖氨酸残基而彼此不同,即TPP-23411包含赖氨酸。TPP-23411和TPP-21360在单独的FACS实验中测试了与人和食蟹猴CCR8的结合。结合人CCR8和食蟹猴CCR8的EC50曲线在两种抗体之间完美比对(数据未显示,IC50值参见表10.1.1.2)。Antibodies TPP-23411 and TPP-21360 are distinguished by the addition of a lysine residue at the C-terminus of the heavy chain; specifically, TPP-23411 contains lysine. TPP-23411 and TPP-21360 were tested for binding to human and cynomolgus monkey CCR8 in separate FACS experiments. The EC50 curves for binding to human and cynomolgus monkey CCR8 were perfectly correlated between the two antibodies (data not shown; IC50 values are shown in Table 10.1.1.2).
表10.1.1.2:以nM为单位测量的候选EC50值。对稳定表达人CCR8或食蟹猴CCR8的CHO细胞进行染色。Table 10.1.1.2: Candidate EC50 values measured in nM. CHO cells stably expressing human CCR8 or cynomolgus monkey CCR8 were stained.
TPP-21181和TPP-23411在单独的FACS实验中测试了与人和食蟹猴CCR8的结合,参见图9、10。各自的EC50值列于表10.1.1.3。TPP-21181 and TPP-23411 were tested for binding to human and cynomolgus monkey CCR8 in separate FACS experiments (see Figures 9 and 10). Their respective EC50 values are listed in Table 10.1.1.3.
表10.1.1.3:以nM为单位测量的抗体EC50值。对稳定表达人CCR8或食蟹猴CCR8的CHO细胞进行染色。Table 10.1.1.3: Antibody EC50 values measured in nM. CHO cells stably expressing human CCR8 or cynomolgus monkey CCR8 were stained.
在进一步的FACS实验中,将现有技术抗体L263G8(Biolegend)和433H(ICOS,BD)与TPP-21360在与人和食蟹猴CCR8的结合方面进行比较,参见图11、12和表10.1.1.4。现有技术抗体仅显示出与食蟹猴CCR8的总体结合很低或基本上没有(低饱和度,此处MFI<<1000)。只有根据本发明的抗体以相同数量级的亲和力特异性识别人和食蟹猴CCR8,即在一些情况下甚至在亚纳摩尔范围内。表10.1.1.4:TPP-21360与L263G8和433H相比的EC50值。对稳定表达人CCR8或食蟹猴CCR8的CHO细胞进行染色。In further FACS experiments, prior art antibodies L263G8 (Biolegend) and 433H (ICOS, BD) were compared with TPP-21360 in terms of binding to human and cynomolgus monkey CCR8, see Figures 11, 12 and Table 10.1.1.4. Prior art antibodies showed only very low or virtually no overall binding to cynomolgus monkey CCR8 (low saturation, MFI << 1000). Only the antibody according to the invention specifically recognized human and cynomolgus monkey CCR8 with the same order of magnitude affinity, i.e., even in the sub-nanomolar range in some cases. Table 10.1.1.4: EC50 values of TPP-21360 compared to L263G8 and 433H. CHO cells stably expressing human or cynomolgus monkey CCR8 were stained.
这些结果表明,针对困难的靶标(例如CCR8),硫酸化抗原的使用促进了对其预期靶标具有特异性的交叉反应性抗体的产生,例如食蟹猴/人抗体。作为概念验证,激活的人Treg用本发明抗体TPP-23411或现有技术抗体L263G8染色,如图13所示。识别鼠CCR8的本发明抗体同样对其靶标具有极好的亲和力,如表10.1.1.5所示。表10.1.1.5:TPP-14095和TPP-14099的EC50值。对表达鼠CCR8的CHO细胞进行FACS染色。These results demonstrate that the use of sulfated antigens promotes the generation of cross-reactive antibodies specific to their intended targets, such as cynomolgus monkey/human antibodies, against difficult targets (e.g., CCR8). As a proof of concept, activated human Tregs were stained with the antibody of this invention, TPP-23411, or the prior art antibody, L263G8, as shown in Figure 13. The antibody of this invention recognizing mouse CCR8 also exhibits excellent affinity for its target, as shown in Table 10.1.1.5. Table 10.1.1.5: EC50 values of TPP-14095 and TPP-14099. FACS staining was performed on CHO cells expressing mouse CCR8.
表10.1.1.6显示了各种其他本发明的抗人CCR8抗体与用人CCR8或食蟹猴CCR8转染的CHO细胞或表达内源性人CCR8的Hut78细胞结合的EC50值。有趣的是,具有G50A突变的抗体对表达食蟹猴CCR8的CHO细胞具有更高的结合亲和力。因此优选包含该构架突变的抗CCR8抗体。Table 10.1.1.6 shows the EC50 values of various other anti-human CCR8 antibodies of the present invention binding to CHO cells transfected with human CCR8 or cynomolgus monkey CCR8, or Hut78 cells expressing endogenous human CCR8. Interestingly, antibodies with the G50A mutation exhibit higher binding affinity to CHO cells expressing cynomolgus monkey CCR8. Therefore, anti-CCR8 antibodies containing this scaffold mutation are preferred.
表10.1.1.6表征本发明的抗人CCR8抗体与转染人CCR8或食蟹猴CCR8的CHO细胞(如本文别处所述)或与内源性表达人CCR8的细胞系HuT78的结合的以M表示的EC50值。Table 10.1.1.6 shows the EC50 values, expressed in M, characterizing the binding of the anti-human CCR8 antibody of the present invention to CHO cells transfected with human CCR8 or cynomolgus monkey CCR8 (as described elsewhere herein) or to the HuT78 cell line endogenously expressing human CCR8.
实施例10.1.2:用于表征抗体对不同物种的未修饰TRD结构域的结合亲和力的SPR实验Example 10.1.2: SPR assay for characterizing the binding affinity of antibodies to unmodified TRD domains of different species
为了分析抗体对其未修饰(即非硫酸化)抗原的亲和力,表面等离子共振(SPR)结合测定在Biacore T200仪器上在25℃下使用测定缓冲液HBS-EP+1x、1mg/ml BSA、300mMNaCl进行。使用与CM5传感器芯片共价胺偶联的抗人Fc IgG捕获IgG。N端His6标记的人CCR8TRD(TPP-19950:MDYTLDLSVTTVTDYYYPDIFSSP,SEQ ID NO:43)、食蟹猴CCR8 TRD(TPP-19952:MDYTLDPSMTTMTDYYYPDSLSSP,SEQ ID NO:44)或鼠CCR8TRD(TPP-19951:MDYTMEPNVTMTDYYPDFFTAP,SEQ ID NO:45)在C端与人血清白蛋白(HSA)融合以生成CCR8-HSA融合蛋白。各自的CCR8-HSA融合蛋白在多循环动力学模式中用作浓度范围为1.56-200nM的分析物。获得的传感图适用于1:1朗缪尔结合模型。对于人抗人CCR8抗体TPP-23411和TPP-21360,结合很低(160nM)并且与食蟹猴CCR8 TRD的结合甚至更低,例如在μM范围内,这些支持硫酸化对于本发明抗体的抗体识别的重要性。To analyze the affinity of antibodies for their unmodified (i.e., non-sulfated) antigens, surface plasmon resonance (SPR) binding assays were performed on a Biacore T200 instrument at 25°C using assay buffer HBS-EP+1x, 1 mg/ml BSA, and 300 mM NaCl. IgG was captured using anti-human Fc IgG covalently coupled to the CM5 sensor chip. N-terminal His6-labeled human CCR8 TRD (TPP-19950: MDYTLDLSVTTVTDYYYPDIFSSP, SEQ ID NO: 43), cynomolgus monkey CCR8 TRD (TPP-19952: MDYTLDPSMTTMTDYYYPDSLSSP, SEQ ID NO: 44), or mouse CCR8 TRD (TPP-19951: MDYTMEPNVTMTDYYPDFFTAP, SEQ ID NO: 45) were fused at the C-terminus with human serum albumin (HSA) to generate CCR8-HSA fusion proteins. The respective CCR8-HSA fusion proteins were used as analytes in a multi-cycle kinetic model at concentrations ranging from 1.56 to 200 nM. The obtained sensor maps were adapted for a 1:1 Langmuir binding model. The binding to human anti-human CCR8 antibodies TPP-23411 and TPP-21360 is very low (160 nM) and even lower with cynomolgus monkey CCR8 TRD, for example in the μM range. These support the importance of sulfation for antibody recognition of the antibodies of the present invention.
表10.1.2.1:通过SPR测定的本发明抗体对人、食蟹猴或鼠CCR8的His6标记的HSA融合TRD的结合亲和力。与食蟹猴CCR8肽的结合在μM范围内,并且是一个近似值,因为测试的最高浓度为200nM。单独的HSA和同种型对照未显示任何结合(数据未显示)。Table 10.1.2.1: Binding affinity of the antibodies of the present invention to His6-labeled HSA fusion TRDs of human, cynomolgus monkey, or mouse CCR8, as determined by SPR. Binding to the cynomolgus monkey CCR8 peptide is in the μM range and is an approximation because the highest concentration tested was 200 nM. No binding was shown for HSA alone or for the isotype control (data not shown).
实施例10.1.3:用于结合亲和力的系统表征的SPR实验Example 10.1.3: SPR Experiment for System Characterization of Binding Affinity
进行SPR结合测定以系统地评估抗体与a)非硫酸化v.硫酸化抗原、b)TRD v.N端和c)人v.食蟹猴CCR8的结合。SPR结合测定是在Biacore T200仪器(Cytiva)上于25℃下使用测定缓冲液1xHBS-EP+(订单号BR100826,Cytiva)进行的。肽用作配体,并使用其C端生物素标记捕获到链霉素蛋白包被的传感器芯片上(“Sensor Chip SA”,订单号BR100398,Cytiva)。为此,在每个肽的C端添加末端赖氨酸(K)以进行生物素化。对于CCR8的N端,TRD和LID结构域之间天然存在的半胱氨酸被丝氨酸取代。抗体用作分析物(TPP-19546、TPP-21181、TPP-23411、hIgG1同种型对照TPP-9809和mIgG2a同种型对照TPP-10748)。测定缓冲液中分析物的浓度为0.05-10nM,测量在多循环动力学模式下进行。传感器表面在每个循环后用甘氨酸pH 2.0再生。获得的传感图是双重参考的(减去参考流动池信号和缓冲液注入),并适用于1:1Langmuir结合模型,以使用Biacore T200评估软件导出动力学数据。SPR binding assays were performed to systematically evaluate the binding of antibodies to a) non-sulfated v. sulfated antigen, b) TRD v. N-terminus, and c) human v. cynomolgus monkey CCR8. SPR binding assays were performed on a Biacore T200 instrument (Cytiva) at 25°C using assay buffer 1xHBS-EP+ (order no. BR100826, Cytiva). Peptides were used as ligands and captured onto a streptomycin-coated sensor chip (“Sensor Chip SA”, order no. BR100398, Cytiva) using their C-terminal biotinylated label. For this purpose, a terminal lysine (K) was added to the C-terminus of each peptide for biotinylation. For the N-terminus of CCR8, the naturally occurring cysteine between the TRD and LID domains was replaced with a serine. Antibodies were used as analytes (TPP-19546, TPP-21181, TPP-23411, hIgG1 isotype control TPP-9809, and mIgG2a isotype control TPP-10748). The concentration of analytes in the assay buffer ranged from 0.05 to 10 nM, and measurements were performed in a multi-cycle kinetic mode. The sensor surface was regenerated with glycine at pH 2.0 after each cycle. The obtained sensor maps were dual-referenced (subtracting the reference flow cell signal and buffer injection) and adapted to a 1:1 Langmuir binding model to export kinetic data using Biacore T200 evaluation software.
表10.1.3.1:用于表征抗体表位的肽列表。包含CCR8的TRD序列(#1至4)或N端(#5至8)的肽,源自食蟹猴(#1、2、5、6)或人(#3、4、7、8)CCR8,硫酸化(#2、4、6、8)或非硫酸化(#1、3、5、7)。SO3:硫酸盐残基。Biot:用于固定的生物素修饰。Table 10.1.3.1: List of peptides used to characterize antibody epitopes. Peptides containing the TRD sequence (#1 to 4) or N-terminus (#5 to 8) of CCR8, derived from cynomolgus monkey (#1, 2, 5, 6) or human (#3, 4, 7, 8) CCR8, sulfated (#2, 4, 6, 8) or non-sulfated (#1, 3, 5, 7). SO3: Sulfate residues. Biot: Biotin modification for immobilization.
对于分析的本发明抗体TPP-19546、TPP-21181和TPP-23411,未检测到与CCR8的非硫酸化TRD或非硫酸化N端的结合,不依赖于物种。相比之下,硫酸化TRD和硫酸化N-term,如食蟹猴和/或人CCR8,测定的KD值在pM范围的优异亲和力。在某些情况下,结合人CCR8 TRD和N端的KD值基本相同,即在误差范围内。在其他情况下,与N端的结合略有改进。For the analyzed antibodies of this invention, TPP-19546, TPP-21181, and TPP-23411, no binding to the non-sulfated TRD or non-sulfated N-terminus of CCR8 was detected, regardless of species. In contrast, sulfated TRD and sulfated N-term, such as cynomolgus monkey and/or human CCR8, showed excellent affinity with measured KD values in the pM range. In some cases, the KD values for binding to the human CCR8 TRD and N-terminus were essentially the same, i.e., within the error range. In other cases, binding to the N-terminus was slightly improved.
总之,这些结果表明硫酸化酪氨酸是结合的原因。他们进一步表明,硫酸化TRD对于结合是必要且充分的,但完整的N端的存在作为表位在某些情况下可能会进一步改善结合。最后,这些结果还证明了人和食蟹猴CCR8的交叉反应性。In summary, these results indicate that sulfated tyrosine is the cause of binding. They further suggest that sulfated TRD is both necessary and sufficient for binding, but the presence of the intact N-terminus as an epitope may further improve binding in certain situations. Finally, these results also demonstrate the cross-reactivity of CCR8 in humans and cynomolgus monkeys.
表10.1.2.3:发明抗体对食蟹猴或人CCR8的TRD或N端的SPR结合亲和力。奇数肽以未修饰的酪氨酸为特征,偶数肽以硫酸化酪氨酸(Ys)为特征。同种型对照未显示与任何肽的结合(数据未显示)。1)mp=多相:近似值。Table 10.1.2.3: Inventive antibody binding affinity to the TRD or N-terminus SPR of cynomolgus monkey or human CCR8. Odd-numbered peptides are characterized by unmodified tyrosine residues, and even-numbered peptides are characterized by sulfated tyrosine residues (Ys). No binding to any peptide was observed in the isotype control (data not shown). 1) mp = polyphase: approximate value.
实施例10.2:结合的特异性Example 10.2: Binding Specificity
如本文别处所述进行FACS分析以确定与靶向阴性人细胞系的非特异性结合。对于具有模拟转染子的CHO细胞,未观察到抗人CCR8抗体TPP-23160的非特异性结合(图14)。FACS analysis was performed as described elsewhere in this article to determine nonspecific binding to the target-negative human cell line. No nonspecific binding of the anti-human CCR8 antibody TPP-23160 was observed in CHO cells with mimic transfectants (Figure 14).
此外,用人CCR1或人CCR4瞬时转染HEK细胞。大多数本发明抗体的脱靶结合较低(图15、16)。In addition, HEK cells were transiently transfected with human CCR1 or human CCR4. Most of the antibodies of this invention exhibited low off-target binding (Figures 15, 16).
使用来自不同肿瘤组织的细胞系的细胞组来表征这些组织中的非特异性结合(表10.2.1)。大多数抗体的总体概况是有利的,而某些抗体可以观察到一定程度的多反应性。总的来说,多反应性的程度在所有发明抗体的治疗应用的可接受范围内。然而,TPP-20950、TPP-18206、TPP-18429、TPP-18430和TPP-18433显示出更高程度的多反应性,并且在下面显示的七个细胞系中的至少两个或三个中显示出一定程度的结合。Cell groups from cell lines derived from different tumor tissues were used to characterize nonspecific binding in these tissues (Table 10.2.1). The overall profile of most antibodies was favorable, while some antibodies showed some degree of multireactivity. Generally, the degree of multireactivity was within acceptable limits for the therapeutic application of all the invented antibodies. However, TPP-20950, TPP-18206, TPP-18429, TPP-18430, and TPP-18433 exhibited higher degrees of multireactivity and showed some degree of binding in at least two or three of the seven cell lines shown below.
表10.2.1:细胞组中本发明抗体的多反应性。如果适用,EC50以M显示。Table 10.2.1: Multireactivity of the antibodies of the present invention in cell groups. EC50 is shown as M, if applicable.
进行第一个基于ELISA的实验以分析抗体TPP-18206、TPP-17578、TPP-19546和TPP-23411以及两种参考抗体与BVP、胰岛素或DNA的非特异性结合。本发明抗体与胰岛素、DNA和/或BVP的非特异性结合低于第一参考抗体(Gantenerumab,Roche)与这些抗原的非特异性结合,也低于第二参考抗体(Remicade,Janssen Biotech)与这些抗原的非特异性结合。在测试的本发明抗体中,TPP-23411显示出对DNA、BVP和胰岛素中的每一种的最低多反应性。The first ELISA-based assay was performed to analyze the nonspecific binding of antibodies TPP-18206, TPP-17578, TPP-19546, and TPP-23411, as well as two reference antibodies, to BVP, insulin, or DNA. The nonspecific binding of the present invention's antibodies to insulin, DNA, and/or BVP was lower than that of the first reference antibody (Gantenerumab, Roche) and also lower than that of the second reference antibody (Remicade, Janssen Biotech). Among the present invention's antibodies tested, TPP-23411 showed the lowest multireactivity to each of DNA, BVP, and insulin.
进行第二个基于ELISA的实验以分析抗体TPP-18206(wt或afuco)、TPP-21360afuco、TPP-23411(wt或afuco)、TPP-20955、TPP-21047、和参考TPP-9809(同种型对照)、Gantenerumab(TPP-12151)、Lenzilumab(TPP-12166)、Remicade(TPP-12160)和Avastin(TPP-17586)。测试的本发明抗体与胰岛素、DNA以及BVP的非特异性结合低于第一参考抗体(Gantenerumab,Roche)的非特异性结合。TPP-20955和TPP-21047显示总体上比其他发明抗体更多的非特异性结合(数据未显示)。总的来说,多反应性程度在所有发明抗体的治疗应用的可接受范围内,不依赖于其非岩藻糖基化状态。A second ELISA-based assay was performed to analyze antibodies TPP-18206 (wt or afuco), TPP-21360 (afuco), TPP-23411 (wt or afuco), TPP-20955, TPP-21047, and reference TPP-9809 (isotype control), Gantenerumab (TPP-12151), Lenzilumab (TPP-12166), Remicade (TPP-12160), and Avastin (TPP-17586). The nonspecific binding of the tested antibodies of the present invention to insulin, DNA, and BVP was lower than that of the first reference antibody (Gantenerumab, Roche). TPP-20955 and TPP-21047 showed generally higher nonspecific binding than other antibodies of the present invention (data not shown). Overall, the degree of multireactivity was within acceptable limits for the therapeutic applications of all the antibodies of the present invention, independent of their unfucosylated state.
进行第三个基于ELISA的实验以分析抗体TPP-27495(YTE)、TPP-27496(LS)、TPP-18429、TPP-18430、TPP-18432、TPP-18433、TPP-18436、TPP-27479、TPP-27480和对照抗体与BVP、胰岛素或DNA的非特异性结合。总的来说,多反应性程度在所有发明抗体的治疗应用的可接受范围内,不依赖于YTE或LS突变。A third ELISA-based assay was performed to analyze the nonspecific binding of antibodies TPP-27495 (YTE), TPP-27496 (LS), TPP-18429, TPP-18430, TPP-18432, TPP-18433, TPP-18436, TPP-27479, TPP-27480, and a control antibody to BVP, insulin, or DNA. Overall, the degree of multireactivity was within acceptable limits for the therapeutic applications of all the invented antibodies, independent of YTE or LS mutations.
通过对这些细胞群进行染色来分析本发明的CCR8抗体与不同于人Treg的免疫细胞群的不期望的结合,参见图17。The undesirable binding of the CCR8 antibody of the present invention to immune cell populations different from human Tregs was analyzed by staining these cell populations, see Figure 17.
图18显示CCR8在激活后人Treg上的上调。Figure 18 shows the upregulation of CCR8 in human Tregs after activation.
实施例10.3:ADCC和ADCP诱导的评估Example 10.3: Evaluation of ADCC and ADCP induction
实施例10.3.1:抗体的无岩藻糖基化Example 10.3.1: Fucosylation-free antibody
根据本发明的抗体是使用GlymaxX技术进行糖工程化,参见US8642292,以改善抗体FC区与效应细胞表达的FC受体之间的相互作用。简而言之,该技术基于细菌酶GDP-6-脱氧-D-lyxo-4-己酮糖还原酶的异源细胞溶质共表达,该酶将岩藻糖从头合成途径重新导向为糖核苷酸GDP-鼠李糖,而后者不能被由真核细胞代谢。这会耗竭岩藻糖库并导致在N-聚糖的核心部分(无核心岩藻糖)和可变部分(无触角岩藻糖)上产生非岩藻糖基化抗体。它还抑制O-聚糖的岩藻糖基化和蛋白质-O-岩藻糖基化。从N297上的N-聚糖去除岩藻糖导致对FcγR的亲和力增加,如实施例10.3.2所示。The antibody according to the invention is glycoengineered using GlymaxX technology, see US8642292, to improve the interaction between the antibody's FC region and the FC receptor expressed on effector cells. Briefly, this technology is based on the heterologous cytosol co-expression of the bacterial enzyme GDP-6-deoxy-D-lyxo-4-hexylose reductase, which redirects the de novo fucose synthesis pathway to the glyconucleotide GDP-rhamnose, which cannot be metabolized by eukaryotic cells. This depletes the fucose library and results in the production of non-fucosylated antibodies on both the core portion (coreless fucose) and the variable portion (antennaeless fucose) of the N-glycan. It also inhibits the fucosylation of O-glycans and protein-O-fucosylation. Removal of fucose from the N-glycan on N297 results in increased affinity for FcγR, as illustrated in Example 10.3.2.
实施例10.3.2:基于SPR的人Fcγ受体结合分析Example 10.3.2: SPR-based human Fcγ receptor binding analysis
为确定本发明的抗体及其非岩藻糖基化形式结合在参与ADCC或ADCP的人效应细胞上表达的相应FC受体的能力,SPR结合测定在T200仪器上于25℃用CM5传感器芯片和测定缓冲液HBS-EP+500mM NaCl进行。FcγR变体通过胺偶联的抗His捕获抗体(ab)捕获,IgG用作浓度高达25μM的分析物。KD值来源于稳态亲和力分析或符合1:1Langmuir等温线的动力学数据。抗体的非岩藻糖基化形式显示出与人和食蟹猴FcgRIIIa两者的结合增加,表明在两个物种中其非岩藻糖化形式的本发明抗体的ADCC诱导得到改善,因此造成Treg耗竭(表10.3.2.1)。To determine the ability of the antibody of the present invention and its non-fucosylated form to bind to the corresponding FC receptor expressed on human effector cells involved in ADCC or ADCP, SPR binding assays were performed on a T200 instrument at 25°C using a CM5 sensor chip and assay buffer HBS-EP + 500 mM NaCl. The FcγR variant was captured by an amine-conjugated anti-His capture antibody (ab), with IgG used as the analyte at concentrations up to 25 μM. KD values were derived from steady-state affinity analysis or kinetic data conforming to the 1:1 Langmuir isotherm. The non-fucosylated form of the antibody showed increased binding to both human and cynomolgus monkey FcgRIIIa, indicating improved ADCC induction in the non-fucosylated form of the antibody of the present invention in both species, thus leading to Treg depletion (Table 10.3.2.1).
此外,对食蟹猴和人FcyRIII两者具有可比的亲和力对于在食蟹猴动物模型中模拟ADCC功效很重要。这些模型系统在肿瘤免疫学中特别重要,因为啮齿动物模型通常不适合反映治疗性抗体的免疫副作用。本发明的非岩藻糖基化抗体显示出对食蟹猴和人中各自的FC受体具有高度可比性的亲和力。Furthermore, comparable affinity for both cynomolgus monkey and human FcyRIII is important for mimicking ADCC efficacy in cynomolgus monkey animal models. These model systems are particularly important in tumor immunology because rodent models are generally unsuitable for reflecting the immune side effects of therapeutic antibodies. The non-fucosylated antibody of the present invention exhibits highly comparable affinity for the respective FC receptors in cynomolgus monkeys and humans.
表10.3.2.1:本发明抗体对不同FC受体的亲和力的SPR分析。斜体:最高浓度为25μM且未达到饱和时的近似值;n.e.:不可评估;n.b.:无结合;res.bdg.:残留结合,不可定量评估;KD>25μM:拟合值超出饱和度。curve.TPP-9809:同种型对照。Table 10.3.2.1: SPR analysis of the affinity of the antibody of this invention for different FC receptors. Italics: approximate value at the highest concentration of 25 μM and before saturation; n.e.: not evaluable; n.b.: no binding; res.bdg.: residual binding, not evaluable quantitatively; KD > 25 μM: fitted value exceeds saturation. curve.TPP-9809: isotype control.
实施例10.3.3:CCR8抗体介导的ADCC诱导Example 10.3.3: CCR8 antibody-mediated ADCC induction
实施例10.3.3.1:抗人CCR8抗体介导的ADCC诱导Example 10.3.3.1: Anti-human CCR8 antibody-mediated ADCC induction
对于功能性ADCC测定,表达人CCR8的HEK细胞或激活的人Treg用作靶细胞,NK92v-GPF-CD16 176V(NantKwest)用作效应细胞。在96孔组织培养处理板中,将表达CCR8的各靶细胞与效应细胞以4:1的比率在存在各种浓度的治疗性抗体的情况下在含有1%热灭活FBS、100 U/ml Pen/Strep、1mN丙酮酸钠和1x NEAA的RPMI1640中孵育。洋地黄皂苷用于最大裂解,并在2小时孵育结束时将CytoTox-Glo(Promega)添加到测定中。使用CytoTox-gloPromega程序确定原始发光值。平均最大背景,MMB=(靶标最大)-(靶标自发)用于计算%裂解。%Lysis=(原始发光-no ab)/MMB X 100。For the functional ADCC assay, HEK cells expressing human CCR8 or activated human Tregs were used as target cells, and NK92v-GPF-CD16 176V (NantKwest) were used as effector cells. In 96-well tissue culture plates, target cells and effector cells expressing CCR8 were incubated at a 4:1 ratio in the presence of various concentrations of therapeutic antibodies in RPMI 1640 containing 1% heat-inactivated FBS, 100 U/ml Pen/Strep, 1 mN sodium pyruvate, and 1x NEAA. Digitalis saponins were used for maximum lysis, and CytoTox-Glo (Promega) was added to the assay at the end of a 2-hour incubation. The raw luminescence value was determined using the CytoTox-gloPromega procedure. The mean maximum background, MMB = (target maximum) - (target spontaneous), was used to calculate % lysis. % Lysis = (raw luminescence - no ab) / MMB x 100.
对于候选抗体TPP-19546(上小图)和TPP-21360(下小图),在表达人CCR8的HEK细胞中,无岩藻糖基化将ADCC诱导的细胞毒性分别增加至~50%和~70%(参见图19)。在具有约85%CCR8表达的激活的人Treg上,由无岩藻糖基化TPP-21360或TPP-23411产生的ADCC衍生细胞毒性高达59%或52%(参见图20,表10.3.3.1.3)。对于无岩藻糖基化的TPP-21360,使用NK92v作为效应细胞,具有85%CCR8表达的激活的人Tregs的细胞毒性%的平均EC50约为~20pM。表10.3.3.1.1至10.3.3.1.6显示了不同发明抗体和/或不同供体的结果。For the candidate antibodies TPP-19546 (top inset) and TPP-21360 (bottom inset), in HEK cells expressing human CCR8, the absence of fucosylation increased ADCC-induced cytotoxicity to ~50% and ~70%, respectively (see Figure 19). In activated human Tregs with approximately 85% CCR8 expression, ADCC-derived cytotoxicity from the absence of fucosylated TPP-21360 or TPP-23411 reached as high as 59% or 52% (see Figure 20, Table 10.3.3.1.3). For the absence of fucosylated TPP-21360, using NK92v as effector cells, the mean EC50 for cytotoxicity % in activated human Tregs with 85% CCR8 expression was approximately ~20 pM. Tables 10.3.3.1.1 to 10.3.3.1.6 show results for different inventive antibodies and/or different donors.
表10.3.3.1.1:ADCC测定总结:使用激活的Tregs作为靶细胞和NK92v细胞系作为效应细胞的EC50和最大应答。Table 10.3.3.1.1: Summary of ADCC assays: EC50 and maximum response using activated Tregs as target cells and NK92v cell line as effector cells.
表10.3.3.1.2:ADCC测定总结:使用激活的Tregs作为靶细胞和NK92v细胞系作为效应细胞的EC50和最大应答。该测定中使用的所有TPP均无岩藻糖基化。Table 10.3.3.1.2: Summary of ADCC Assay: EC50 and maximum response were measured using activated Tregs as target cells and the NK92v cell line as effector cells. All TPPs used in this assay were unfucosylated.
表10.3.3.1.3:ADCC测定总结:使用激活的Tregs作为靶细胞和NK92v细胞系作为效应细胞的EC50和最大应答。本研究中使用的激活的人Treg具有约85%的CCR8表达。Table 10.3.3.1.3: Summary of ADCC assays: EC50 and maximum response were measured using activated Tregs as target cells and the NK92v cell line as effector cells. The activated human Tregs used in this study had approximately 85% CCR8 expression.
表10.3.3.1.4:ADCC测定总结:使用Tregs作为靶细胞和NK92v细胞系作为效应细胞EC50和最大应答。本研究中使用的激活的人Treg只有约31%的CCR8表达。Table 10.3.3.1.4: Summary of ADCC assays: Tregs were used as target cells and the NK92v cell line as effector cells for EC50 and maximum response. The activated human Tregs used in this study showed only approximately 31% CCR8 expression.
表10.3.3.1.5:ADCC测定:使用表达人CCR8(>95%CCR8)的HEK细胞作为靶细胞和NK92v细胞系作为效应细胞的EC50和最大应答。Table 10.3.3.1.5: ADCC assay: EC50 and maximum response were measured using HEK cells expressing human CCR8 (>95% CCR8) as target cells and NK92v cell line as effector cells.
表10.3.3.1.6:ADCC测定:使用表达人CCR8(>95%CCR8)的HEK细胞作为靶细胞和NK92v细胞系作为效应细胞的EC50和最大应答。Table 10.3.3.1.6: ADCC assay: EC50 and maximum response were measured using HEK cells expressing human CCR8 (>95% CCR8) as target cells and NK92v cell line as effector cells.
实施例10.3.3.2:抗小鼠CCR8抗体(替代抗体)介导的ADCC诱导Example 10.3.3.2: Anti-mouse CCR8 antibody (alternative antibody) mediated ADCC induction
为了比较本发明的人抗人/食蟹猴CCR8抗体与本发明的人抗鼠CCR8替代抗体的行为,后者同样表征了ADCC诱导。使用原代鼠NK细胞作为效应细胞,使用鼠CCR8表达HEK293细胞和BW5417.3(数据未显示)作为靶细胞进行替代抗体的功能性ADCC测定。在共培养期间使用含有超低IgG的培养基以避免CCR8抗体与血清IgG的非特异性结合。此外,为了更准确地反映体内情况,在添加效应细胞之前首先将靶细胞与替代CCR8抗体预孵育,从而使FcγRIII更好地聚集在效应细胞上,这是ADCC作用模式的早期步骤。使用U型底96孔板,在含有1%Ultra-low IgG FBS One Shot培养基的RPMI 1640中以10∶1的比率将效应细胞和靶细胞共培养20小时。替代抗鼠CCR8抗体TPP-15285和同种型对照抗体TPP-10748用于各种浓缩步骤。使用CytoTox-Glo TM Cytotoxicity Assay(Promega)确定细胞毒性(细胞毒性%=[(实验值-不含抗体的对照/(靶细胞的最大裂解-靶细胞的自发裂解)]x 100%)。实验值通过在添加替代CCR8抗体后将靶细胞与效应细胞共培养来确定对照值。通过在不添加本发明抗体的情况下将靶细胞与效应细胞共培养来测定对照值。对于已经在测定开始加入洋地黄皂苷的情况下,确定靶细胞的最大裂解值。通过测量测定培养基中靶细胞的自发裂解而不加入任何其他试剂来确定自发裂解值。92%至97%的靶细胞显示出鼠CCR8的表达(通过FACS确定)。TPP-15285的ADCC相关细胞毒性约为39%,平均EC50约为111pM(表10.3.3.2.1)。本发明的最高抗体浓度导致钩(hook)效应,进一步支持提议的基于ADCC的作用模式。优化的功能性ADCC测定因此证实ADCC是本发明替代CCR8抗体体内功效的相关作用模式,并因此证实抗鼠CCR8抗体TPP-15285适合作为抗人CCR8抗体的替代抗体.To compare the behavior of the human anti-human/cynomolgus monkey CCR8 antibody of the present invention with that of the human anti-mouse CCR8 alternative antibody of the present invention, the latter also characterizing ADCC induction, primary mouse NK cells were used as effector cells, and mouse CCR8-expressing HEK293 cells and BW5417.3 (data not shown) were used as target cells for functional ADCC assays of the alternative antibody. A medium containing ultra-low IgG was used during co-culture to avoid non-specific binding of the CCR8 antibody to serum IgG. Furthermore, to more accurately reflect in vivo conditions, the target cells were pre-incubated with the alternative CCR8 antibody before adding effector cells, thereby allowing FcγRIII to better aggregate on the effector cells, an early step in the ADCC action mode. Effector cells and target cells were co-cultured for 20 hours at a 10:1 ratio in RPMI 1640 containing 1% Ultra-low IgG FBS One Shot medium in U-bottom 96-well plates. The alternative anti-mouse CCR8 antibody TPP-15285 and the isotype control antibody TPP-10748 were used for various concentration steps. Cytotoxicity was determined using the CytoTox-Glo ™ Cytotoxicity Assay (Promega) (Cytotoxicity % = [(Experimental value - Control without antibody / (Maximum lysis of target cells - Spontaneous lysis of target cells)] x (100%). Control values were determined by co-culturing target cells with effector cells after adding the alternative CCR8 antibody. Control values were also determined by co-culturing target cells with effector cells without adding the antibody of the present invention. The maximum lysis value of target cells was determined for cases where digitalis saponins were added at the start of the assay. Spontaneous lysis values were determined by measuring spontaneous lysis of target cells in the assay medium without adding any other reagents. 92% to 97% of target cells showed expression of mouse CCR8 (determined by FACS). The ADCC-related cytotoxicity of TPP-15285 was approximately 39%, with a mean EC50 of approximately 111 pM (Table 10.3.3.2.1). The highest antibody concentration of the present invention resulted in a hook effect, further supporting the proposed ADCC-based mode of action. The optimized functional ADCC assay thus confirms that ADCC is the relevant mode of action for the in vivo efficacy of the alternative CCR8 antibody of the present invention, and therefore confirms that the anti-mouse CCR8 antibody TPP-15285 is suitable as an alternative antibody to the anti-human CCR8 antibody.
表10.3.3.2.1:使用岩藻糖基化(野生型)替代CCR8抗体的ADCC测定总结。Table 10.3.3.2.1: Summary of ADCC assays using fucosylation (wild-type) as an alternative to CCR8 antibody.
表10.3.3.2.2:ADCC测定显示由野生型替代CCR8抗体TPP-15285诱导的细胞毒性百分比(4次重复)。Table 10.3.3.2.2: ADCC assay showing the percentage of cytotoxicity induced by wild-type alternative CCR8 antibody TPP-15285 (4 replicates).
实施例10.3.4:抗CCR8抗体介导的ADCP诱导Example 10.3.4: Anti-CCR8 antibody-mediated ADCP induction
实施例10.3.4.1:抗人CCR8抗体介导的ADCP诱导Example 10.3.4.1: Anti-human CCR8 antibody-mediated ADCP induction
为了产生巨噬细胞(M2c)效应细胞,从健康供体(AllCells)的PBMC中阴性选择(Miltenyi)CD14+细胞。根据StemCell Tech提供的八天分化方案进行M2c巨噬细胞分化(参见图21)。在测定日,使用FACS对M2c进行染色以了解CD16、CD32、CD64、CD163、CD206、CD11b、CD80和CD14的表达。靶细胞是表达人CCR8的HEK细胞或激活的人Treg细胞。简而言之,根据制造商的说明,用羧基荧光素琥珀酰亚胺酯(CFSE)(ThermoFisher)标记靶细胞。靶细胞在96孔板中与不同浓度的抗体和效应细胞以4:1的靶细胞对效应细胞比率进行共培养孵育。在这些测定中,添加了1μg/ml的抗CD47(阳性对照);这会增强应答,因为它会阻止“不要吃我”信号。孵育3-4小时后,样品在MACSQuant或Attune流式细胞仪上运行。吞噬作用%由CD206+CFSE+双阳性细胞测定。CD206是在巨噬细胞上表达的标志物。To generate macrophage (M2c) effector cells, CD14+ cells were negatively selected (Miltenyi) from PBMCs of healthy donors (AllCells). M2c macrophage differentiation was performed according to the eight-day differentiation protocol provided by StemCell Tech (see Figure 21). On assay day, M2c cells were stained with FACS to assess the expression of CD16, CD32, CD64, CD163, CD206, CD11b, CD80, and CD14. Target cells were HEK cells expressing human CCR8 or activated human Treg cells. Briefly, target cells were labeled with carboxyfluorescein succinimide (CFSE) (ThermoFisher) according to the manufacturer's instructions. Target cells were co-cultured in 96-well plates with varying concentrations of antibody and effector cells at a target cell to effector cell ratio of 4:1. In these assays, 1 μg/ml of anti-CD47 (positive control) was added; this enhances the response as it blocks the "don't eat me" signal. After incubation for 3–4 hours, samples were run on a MACSQuant or Attune flow cytometer. Phagocytosis percentage was determined by CD206+CFSE+ double-positive cells. CD206 is a marker expressed on macrophages.
M1巨噬细胞类似地从相同的来源材料(新鲜的PBMC)中产生。简而言之,通过阴性选择分离CD14+细胞,并在含有50ng/mL M-CSF的无血清培养基(StemCell TechImmnocult)中培养四天。然而,在第5天,M1巨噬细胞通过添加10ng/mL LPS+50ng/mL IFN-g进行极化,而M2c巨噬细胞通过添加10ng/mL IL-10进行极化。M1 macrophages were similarly generated from the same source material (fresh PBMCs). Briefly, CD14+ cells were isolated by negative selection and cultured for four days in serum-free medium (StemCell TechImmnocult) containing 50 ng/mL M-CSF. However, on day 5, M1 macrophages were polarized by the addition of 10 ng/mL LPS + 50 ng/mL IFN-γ, while M2c macrophages were polarized by the addition of 10 ng/mL IL-10.
图22显示了表达人CCR8的HEK细胞作为靶细胞,体外分化的巨噬细胞M2c作为效应细胞诱导吞噬作用。本发明抗体TPP-19546、TPP-21360和TPP-23411的野生型和无岩藻糖基化形式两者均诱导ADCP。图23和24以及表10.3.4.1.1至10.3.4.1.7显示了以EC50和对多种本发明抗体、多种供体和不同巨噬细胞群的最大应答为特征的ADCP诱导。对于所有抗体,观察到相当程度的ADCP。Figure 22 shows HEK cells expressing human CCR8 as target cells and in vitro differentiated M2c macrophages as effector cells inducing phagocytosis. Both wild-type and fucosylated forms of the present invention's antibodies TPP-19546, TPP-21360, and TPP-23411 induced ADCP. Figures 23 and 24, and Tables 10.3.4.1.1 to 10.3.4.1.7, show ADCP induction characterized by EC50 and maximum response to various antibodies of the present invention, various donors, and different macrophage populations. A considerable degree of ADCP was observed for all antibodies.
表10.3.4.1.1:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。该测定中使用的所有TPP均无岩藻糖基化。TPP-9809是同种型对照。对于人Treg供体1212CCR8由40%的细胞表达。Table 10.3.4.1.1: Summary of ADCP Assay: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. All TPPs used in this assay were unfucosylated. TPP-9809 was an isotype control. The human Treg donor 1212CCR8 was expressed in 40% of the cells.
表10.3.4.1.2:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。对于人类Treg供体1163CCR8由67%的细胞表达。Table 10.3.4.1.2: Summary of ADCP assays: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control. The human Treg donor 1163CCR8 was expressed in 67% of the cells.
表10.3.4.1.3:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。对于人类Treg供体1163CCR8由67%的细胞表达。Table 10.3.4.1.3: Summary of ADCP assays: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control. The human Treg donor 1163CCR8 was expressed in 67% of the cells.
表10.3.4.1.4:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。对于人Treg供体1212CCR8由40%的细胞表达。Table 10.3.4.1.4: Summary of ADCP assays: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control. Human Treg donor 1212CCR8 was expressed in 40% of cells.
表10.3.4.1.5:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。对于人Treg供体1212CCR8由40%的细胞表达。Table 10.3.4.1.5: Summary of ADCP assays: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control. Human Treg donor 1212CCR8 was expressed in 40% of cells.
表10.3.4.1.6:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。Table 10.3.4.1.6: Summary of ADCP assay: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control.
表10.3.4.1.7:ADCP测定总结:使用激活的Tregs作为靶细胞和M2c巨噬细胞作为效应细胞的EC50和最大应答。TPP-9809是同种型对照。Table 10.3.4.1.7: Summary of ADCP assay: EC50 and maximum response were measured using activated Tregs as target cells and M2c macrophages as effector cells. TPP-9809 was an isotype control.
表10.3.4.1.7:使用Incucyte实时成像的ADCP测定总结:使用巨噬细胞作为效应细胞和表达人CCR8的HEK细胞作为靶细胞且比率为4:1时的EC50和最大应答。人CCR8表达为80%。TPP-9809是同种型对照。M2c巨噬细胞被接种到超低附着的96孔板中。添加不同浓度的治疗性抗体后,添加pHrodo红色染料(Sartorius#4649)标记的靶细胞,并将板在37℃和5%CO2下孵育。使用Incucyte S3中的20x物镜每30分钟自动获取和分析相差和红色荧光图像,持续12小时(4张图片/孔,3次重复)。ADCP诱导因测试的治疗性野生型抗体而异。Table 10.3.4.1.7: Summary of ADCP assays using Incucyte real-time imaging: EC50 and maximum response using macrophages as effector cells and HEK cells expressing human CCR8 as target cells at a ratio of 4:1. Human CCR8 expression was 80%. TPP-9809 was used as an isotype control. M2c macrophages were seeded into ultra-low attachment 96-well plates. After adding different concentrations of therapeutic antibody, target cells labeled with pHrodo red dye (Sartorius #4649) were added, and the plates were incubated at 37°C and 5% CO2. Phase contrast and red fluorescence images were automatically acquired and analyzed every 30 minutes using a 20x objective lens in the Incucyte S3 for 12 hours (4 images/well, 3 replicates). ADCP induction varied depending on the therapeutic wild-type antibody tested.
实施例10.3.4.2:由抗鼠CCR8抗体(替代抗体)介导的ADCP诱导Example 10.3.4.2: ADCP induction mediated by anti-mouse CCR8 antibody (alternative antibody)
为了比较本发明的人抗人/食蟹猴CCR8抗体与本发明的人抗鼠CCR8替代抗体的行为,后者同样表征了ADCP诱导。对于功能性ADCP测定,原代小鼠骨髓衍生的M2巨噬细胞用作效应细胞,鼠CCR8表达HEK293细胞和BW 5417.3细胞(数据未显示)用作靶细胞。为了产生效应细胞,将鼠骨髓衍生的巨噬细胞接种到24孔板中,并通过添加20ng/ml M-CSF、0.05μg/mlIL-4和0.05μg/ml IL-13极化为M2巨噬细胞。靶细胞用羧基荧光素琥珀酰亚胺酯染料(CFSE,ThermoFisher)标记,并以效应细胞与靶细胞的比率为2:1添加到效应细胞中。最后,添加不同浓度的替代抗鼠CCR8抗体TPP-15285和同种型对照TPP-10748。共培养2小时后,对细胞进行鼠M2巨噬细胞标志物F4/80染色,并使用流式细胞术测量F4/80+和CFSE+双阳性巨噬细胞的级分来确定吞噬作用的百分比。92%至97%的靶细胞显示鼠CCR8的表达(如通过FACS确定的)。TPP-15285诱导的吞噬作用为~11%,平均EC50为~402pM(表10.3.4.2.1)。最高抗体浓度导致钩效应,进一步支持提议的作用方式。优化的功能性ADCP测定进一步证实ADCP是本发明替代CCR8抗体体内功效的相关作用模式,因此证实抗鼠CCR8抗体TPP-15285适合作为抗CCR8抗体的替代抗体.To compare the behavior of the human anti-human/cynomolgus monkey CCR8 antibody of the present invention with that of the human anti-mouse CCR8 alternative antibody of the present invention, the latter also characterized ADCP induction. For the functional ADCP assay, primary mouse bone marrow-derived M2 macrophages were used as effector cells, and mouse CCR8-expressing HEK293 cells and BW 5417.3 cells (data not shown) were used as target cells. To generate effector cells, mouse bone marrow-derived macrophages were seeded into 24-well plates and polarized into M2 macrophages by adding 20 ng/ml M-CSF, 0.05 μg/ml IL-4, and 0.05 μg/ml IL-13. Target cells were labeled with carboxyfluorescein succinimide dye (CFSE, ThermoFisher) and added to effector cells at an effector cell to target cell ratio of 2:1. Finally, different concentrations of the alternative anti-mouse CCR8 antibody TPP-15285 and the isotype control TPP-10748 were added. After co-culturing for 2 hours, cells were stained with the mouse M2 macrophage marker F4/80, and the fractionation of F4/80+ and CFSE+ double-positive macrophages was determined by flow cytometry to ascertain the percentage of phagocytosis. 92% to 97% of target cells showed expression of mouse CCR8 (as determined by FACS). TPP-15285-induced phagocytosis was ~11%, with a mean EC50 of ~402 pM (Table 10.3.4.2.1). The highest antibody concentration resulted in a hook effect, further supporting the proposed mode of action. Optimized functional ADCP assays further confirmed that ADCP is the relevant mode of action for the in vivo efficacy of the CCR8 antibody of this invention, thus demonstrating that the anti-mouse CCR8 antibody TPP-15285 is suitable as an alternative antibody to anti-CCR8 antibodies.
表10.3.4.2.1:使用岩藻糖基化(野生型)替代CCR8抗体的ADCP测定总结。Table 10.3.4.2.1: Summary of ADCP assays using fucosylation (wild-type) as an alternative to CCR8 antibody.
表10.3.4.2.2:使用替代CCR8抗体的ADCP测定。Table 10.3.4.2.2: ADCP assay using alternative CCR8 antibody.
实施例10.4:CCR8抗体对CCR8信号的调节Example 10.4: Regulation of CCR8 signaling by CCR8 antibody
CCL1是CCR8的特异性配体。与CCR8结合后,CCL 1可以诱导钙(Ca)通量、趋化性,以及通过β-arrestin信号传导-受体内化,后者可能独立于G蛋白信号传导。抗体至少可以通过6种不同的方式调节GPCR:CCL1 is a specific ligand for CCR8. Upon binding to CCR8, CCL1 can induce calcium (Ca) flux, chemotaxis, and receptor internalization via β-arrestin signaling, the latter potentially independent of G protein signaling. Antibodies can regulate GPCRs in at least six different ways:
1.反向激动剂在结合后会平息GPCR的潜在内源性激活。对于CCR8,内源性激活可以是例如~10%。1. The inverse agonist quells the potential endogenous activation of GPCRs upon binding. For CCR8, endogenous activation can be, for example, ~10%.
2.偏向β-arrestin或G蛋白的拮抗剂会阻断G蛋白依赖性信号或β-arrestin信号,并且对各自的其他途径没有影响。2. Antagonists that favor β-arrestin or G proteins block G protein-dependent signaling or β-arrestin signaling without affecting their other pathways.
3.中性拮抗剂可以阻断G蛋白和β-arrestin信号通路。3. Neutral antagonists can block the G protein and β-arrestin signaling pathways.
4.完全激动剂激活G蛋白和β-arrestin信号通路。4. Full agonists activate G protein and β-arrestin signaling pathways.
5.偏向β-arrestin或G蛋白的激动剂激活G蛋白信号通路或β-arrestin信号通路,但不能同时激活两者。5. Agonists that favor β-arrestin or G proteins activate either the G protein signaling pathway or the β-arrestin signaling pathway, but cannot activate both simultaneously.
6.促进二聚化的激动剂交联两个GPCR,例如抗体的不同臂,导致各种信号活动。6. Agonists that promote dimerization crosslink two GPCRs, such as different arms of an antibody, leading to various signaling activities.
对于基于ADCC和ADCP的消除肿瘤内Tregs的方法,排除抗体可能对CCR8产生的任何潜在信号效应是理想的。为评估这一点,发明人使用Ca通量测定作为G蛋白依赖性信号传导的读数,并使用β-arrestin激活和磷酸信号传导作为G蛋白非依赖性信号通路的读数。磷酸化Erk1/2参与MAP激酶通路并调节多种细胞应答,而众所周知,磷酸化AKT与PI3激酶通路相关,并已在CCR8中显示参与促进趋化性。AKT通路也参与促进细胞存活和生长,最近,CCL1已被证明可促进CCR8表达细胞的存活(Barsheshet,Yiftah,et al.″CCR8+FOXp3+Tregcells as master drivers of immune regulation.″Proceedings of the NationalAcademy of Sciences 114.23(2017):6086-6091.)。For methods to eliminate intratumoral Tregs based on ADCC and ADCP, it is ideal to exclude any potential signaling effects that antibodies might produce on CCR8. To assess this, the inventors used Ca flux assays as a readout of G protein-dependent signaling and β-arrestin activation and phosphate signaling as readouts of G protein-independent signaling pathways. Phosphorylation of Erk1/2 is involved in the MAP kinase pathway and regulates a variety of cellular responses, while phosphorylation of AKT is known to be associated with the PI3 kinase pathway and has been shown to be involved in promoting chemotaxis in CCR8. The AKT pathway is also involved in promoting cell survival and growth, and recently, CCL1 has been shown to promote the survival of CCR8-expressing cells (Barsheshet, Yiftah, et al. "CCR8+FOXp3+Treg cells as master drivers of immune regulation." Proceedings of the National Academy of Sciences 114.23 (2017): 6086-6091.).
实施例10.4.1:用于监测β-arrestin信号传导的DiscoverX测定Example 10.4.1: DiscoverX Measurement for Monitoring β-arrestin Signal Transduction
应答于刺激,即配体的结合-例如CCL1与CCR8-GPCR可以激活G蛋白非依赖性信号,如β-arrestin信号。这会导致趋化因子受体的内化(Fox,James M.,et al.″Structure/Function Relationships of CCR8 Agonists and Antagonists.Amino-terminalextension of CCL1 by a single amino acid generates a partial agonist.″Journalof Biological Chemistry 281.48(2006):36652-36661)。β-arrestin测定购自DiscoverX。简而言之,CCR8与一个小的酶供体片段ProLinkTM(PK)在框内融合,并在稳定表达β-arrestin和β-半乳糖苷酶(称为酶接受者或EA)的较大的N-端缺失突变体的融合蛋白的细胞中共表达。CCR8的激活会刺激β-arrestin与PK标记的CCR8结合,并迫使两种酶片段互补,从而形成具有活性的β-半乳糖苷酶。这种相互作用导致酶活性增加,可以使用化学发光PathHunter检测试剂进行测量。In response to stimuli, i.e., ligand binding—for example, CCL1 and CCR8-GPCR can activate G protein-independent signals, such as β-arrestin signaling. This leads to the internalization of chemokine receptors (Fox, James M., et al. "Structure/Function Relationships of CCR8 Agonists and Antagonists. Amino-terminal extension of CCL1 by a single amino acid generates a partial agonist." Journal of Biological Chemistry 281.48(2006): 36652-36661). β-arrestin assays were purchased from DiscoverX. In short, CCR8 is fused in-frame with a small enzyme donor fragment, ProLink ™ (PK), and co-expressed in cells with a fusion protein that stably expresses a larger N-terminal deletion mutant of β-arrestin and β-galactosidase (called the enzyme acceptor or EA). Activation of CCR8 stimulates β-arrestin to bind to PK-labeled CCR8, forcing the two enzyme fragments to complement each other, thereby forming an active β-galactosidase. This interaction leads to increased enzyme activity, which can be measured using the chemiluminescent PathHunter assay.
在第一个实验中,抗体或CCL1与共表达用ProLink标记的人CCR8和EA的CHO细胞孵育90分钟,然后添加检测剂。现有技术抗体和本发明抗体均未诱导β-arrestin信号传导(图25)。In the first experiment, the antibody or CCL1 was incubated with CHO cells co-expressing human CCR8 and EA labeled with ProLink for 90 minutes, followed by the addition of the detection reagent. Neither the prior art antibody nor the antibody of this invention induced β-arrestin signaling (Figure 25).
在下一个实验中,于EC80用CCL1刺激细胞以激活β-arrestin信号传导,并添加本发明的抗体或现有技术抗体以评估它们阻断激活的β-arrestin信号的能力。令人惊讶的是,β-arrestin信号传导被现有技术抗体L263G8和433H阻断,而本发明的抗体TP-23411显示对β-arrestin信号传导没有显著影响,至少达到100nM的浓度(图26)。In the next experiment, cells were stimulated with CCL1 at EC80 to activate β-arrestin signaling, and the antibodies of the present invention or prior art antibodies were added to evaluate their ability to block activated β-arrestin signaling. Surprisingly, β-arrestin signaling was blocked by prior art antibodies L263G8 and 433H, while the antibody of the present invention TP-23411 showed no significant effect on β-arrestin signaling at a concentration of at least 100 nM (Figure 26).
表10.4.1.1:TPP-23411和现有技术抗体L263G8和433H抑制CCL1诱导的的β-arrestin信号传导的IC50值,单位为nM。对稳定表达用ProLink标记的人CCR8的CHO细胞进行染色。无法确定本发明抗体的IC50,表明TPP-23411不阻断CCL1诱导的β-arrestin信号传导。Table 10.4.1.1: IC50 values of TPP-23411 and prior art antibodies L263G8 and 433H for inhibiting CCL1-induced β-arrestin signaling, in nM. CHO cells stably expressing ProLink-labeled human CCR8 were stained. The IC50 of the antibody of the present invention could not be determined, indicating that TPP-23411 does not block CCL1-induced β-arrestin signaling.
实施例10.4.2:磷酸ELISAExample 10.4.2: Phosphate ELISA
磷酸化AKT信号传导促进生存和生长,而磷酸化Erk1/2信号传导调节多种细胞响应。磷酸化Erk1/2和磷酸化AKT抗体购自CellSignaling,并根据制造商的方案进行ELISA测定。表达人CCR8或激活的人Treg的CHO细胞用CCL1、TPP-23411、Biolegend L263G8或BD抗体433H处理,或保持未处理作为阴性对照。CCL1作为阳性对照。有趣的是,现有技术抗体Biolegend L263G8和BD抗体433H两者均诱导磷酸化Erk1/2水平(图27、28)以及磷酸化AKT水平(图29、30)的显著增加,例如在激活的人Tregs中15分钟后,本发明抗体的情况并非如此。Phosphorylated AKT signaling promotes survival and growth, while phosphorylated Erk1/2 signaling regulates a variety of cellular responses. Phosphorylated Erk1/2 and phosphorylated AKT antibodies were purchased from CellSignaling and assayed by ELISA according to the manufacturer's protocol. CHO cells expressing human CCR8 or activated human Tregs were treated with CCL1, TPP-23411, Biolegend L263G8, or BD antibody 433H, or left untreated as a negative control. CCL1 served as a positive control. Interestingly, both the prior art antibodies Biolegend L263G8 and BD antibody 433H induced a significant increase in phosphorylated Erk1/2 levels (Figs. 27, 28) and phosphorylated AKT levels (Figs. 29, 30), for example, after 15 minutes in activated human Tregs, which was not the case with the antibodies of the present invention.
总之,两种现有技术抗体都对G蛋白非依赖性途径如AKT磷酸化或ERK1/2磷酸化具有激动作用。In summary, both existing antibody technologies have agonistic effects on G protein-independent pathways such as AKT phosphorylation or ERK1/2 phosphorylation.
实施例10.4.3:钙通量测定Example 10.4.3: Calcium flux determination
细胞内钙动员的测量是一种可靠的检测方法,其可以以高通量方式进行以研究化合物或抗体对潜在药物靶点(如CCR8)的影响。为此,可以使用基于荧光的FLIPR钙测定法(Molecular Devices,Sunnyvale,CA)监测通过释放Ca2+发出的信号的受体的活性。简而言之,将表达人CCR8的CHO细胞接种到测定板中并孵育过夜。然后将细胞加载Ca+敏感染料BUV396/496。Intracellular calcium mobilization measurement is a reliable detection method that can be performed in a high-throughput manner to study the effects of compounds or antibodies on potential drug targets such as CCR8. For this purpose, the activity of receptors that emit signals by releasing Ca2+ can be monitored using a fluorescence-based FLIPR calcium assay (Molecular Devices, Sunnyvale, CA). Briefly, CHO cells expressing human CCR8 are seeded into assay plates and incubated overnight. The cells are then loaded with the Ca+-sensitive dye BUV396/496.
对于拮抗功能的测量,通过FLIPR Tera监测Ca通量信号,这与向细胞中添加不同浓度的抗体或参考化合物(MC148)同时开始。将细胞与抗体或参考化合物孵育1分钟后,添加CCL1激动剂,并通过FLIPR Tetra额外记录钙通量信号3分钟。为测量激动功能,平行添加抗体/参考化合物以通过FLIPR监测Ca通量信号3分钟。For the measurement of antagonistic function, Ca flux signal was monitored using FLIPR Tetra, which was initiated simultaneously with the addition of different concentrations of antibody or reference compound (MC148) to the cells. After incubating the cells with the antibody or reference compound for 1 minute, the CCL1 agonist was added, and the calcium flux signal was additionally recorded using FLIPR Tetra for 3 minutes. To measure agonistic function, the antibody/reference compound was added in parallel to monitor the Ca flux signal using FLIPR for 3 minutes.
表10.4.3.1至10.4.3.4显示了抗鼠或抗人CCR8抗体的钙通量测定结果。无法确定TPP-14099和TPP-21047的IC50。其他本发明抗体的IC 50不同。一般而言,大多数本发明抗体以及现有技术抗体有效阻断CCL1诱导的G蛋白依赖性信号传导。Tables 10.4.3.1 to 10.4.3.4 show the calcium flux assay results for anti-mouse or anti-human CCR8 antibodies. The IC50 values for TPP-14099 and TPP-21047 could not be determined. The IC50 values for other antibodies of this invention differ. In general, most antibodies of this invention, as well as prior art antibodies, effectively block CCL1-induced G protein-dependent signaling.
表10.4.3.1:Ca通量测定。表达鼠CCR8的CHO细胞用于测试抗体阻断CCL1诱导的G蛋白依赖性Ca信号传导的能力。40ng/ml的CCL1用于诱导。TPP-14095和TPP-14099都与小鼠CCR8结合。对于本发明抗体或现有技术抗体,未观察到对G蛋白依赖性Ca信号传导的激动作用(数据未显示)。Table 10.4.3.1: Ca flux assay. CHO cells expressing mouse CCR8 were used to test the ability of the antibody to block CCL1-induced G protein-dependent Ca signaling. 40 ng/ml of CCL1 was used for induction. Both TPP-14095 and TPP-14099 bound to mouse CCR8. No agonistic effect on G protein-dependent Ca signaling was observed with either the antibody of this invention or prior art antibodies (data not shown).
表10.4.3.2:Ca通量测定。表达人CCR8的CHO细胞用于测试抗体阻断CCL1诱导的G蛋白依赖性Ca信号传导的能力。CCL1以80ng/ml的浓度使用。Table 10.4.3.2: Ca flux assay. CHO cells expressing human CCR8 were used to test the ability of the antibody to block CCL1-induced G protein-dependent Ca signaling. CCL1 was used at a concentration of 80 ng/ml.
表10.4.3.3:Ca通量测定。表达人CCR8的CHO细胞用于测试抗体阻断CCL1诱导的G蛋白依赖性Ca信号传导的能力。CCL1以60ng/ml的浓度使用。Table 10.4.3.3: Ca flux assay. CHO cells expressing human CCR8 were used to test the ability of the antibody to block CCL1-induced G protein-dependent Ca signaling. CCL1 was used at a concentration of 60 ng/ml.
表10.4.3.4:Ca通量测定。表达人CCR8的CHO细胞用于测试抗体阻断CCL1诱导的G蛋白依赖性Ca信号传导的能力。CCL1以60ng/ml的浓度使用。Table 10.4.3.4: Ca flux assay. CHO cells expressing human CCR8 were used to test the ability of the antibody to block CCL1-induced G protein-dependent Ca signaling. CCL1 was used at a concentration of 60 ng/ml.
实施例10.5:本发明抗体的内化Example 10.5: Internalization of the antibody of the present invention
为了评估CCR8的内化,成像技术被用来可视化这个过程。特异性抗CCR8抗体TPP-21360和TPP-23411以及相应的同种型对照抗体TPP-5657用荧光染料标记。此外,商业抗体L263G8和433H以及鼠抗体SA214G2也与永久染料BODIPY结合。这些抗体在pH 8.3下与2至6摩尔过量的FL染料(酯,D2184,ThermoFisher)进行赖氨酸偶联。缀合后,通过色谱法(PD10脱盐柱1-2.5ml;GE Healthcare)纯化反应混合物以去除过量染料并调节pH值。然后,浓缩蛋白质溶液(VIVASPIN 500,Fa.Sartoriusstedim biotec)。使用分光光度计(NanoDrop)测定抗体的染料载量,并使用公式D:P=Adye εprotein:(A280-0,16Adye)εdye进行计算。靶标特异性抗体TPP-21360和TPP-23411以及同种型对照抗体的染料载量显示在相似的范围内(染料载量/ab:4.0和4.1)。商业抗体引起3.8和3.9的染料负载/抗体。缀合可能对抗体亲和力产生负面影响,因此在细胞结合测定(FACS)中测试缀合抗体对于确保标记不会改变与CCR8(CD198)的结合至关重要(参见图31a,图32a、图34a、b)。然后,偶联抗体可用于使用人CCR8阳性细胞系HuT78和鼠CCR8阳性细胞系BW5147.3进行的内化测定。在处理之前,将表达CCR8的细胞系(2x104/孔)接种在96-MTP(CellCarrier Ultra,PerkinElmer)中的100μl培养基中。在37℃/5%CO2条件下孵育18小时后,更换培养基并添加不同浓度的标记抗体(2.5、1μg/ml;重复三次)。对标记的同种型对照抗体(阴性对照)应用相同的处理方案。此外,将亲本CHO-K1细胞系(CCR8阴性细胞)作为计数器筛选(特异性对照)进行类似处理。以动力学方式进行靶标特异性抗体的内化研究。在不同时间点(0小时、0.5小时、2小时、6小时和24小时)后拍摄图像,并通过测量总内化荧光强度/细胞来确定内化功效。使用Operetta CLS(PerkinElmer)进行测量,并使用Harmony高内涵分析软件(PerkinElmer)进行图像数据分析。To assess CCR8 internalization, imaging techniques were used to visualize the process. Specific anti-CCR8 antibodies TPP-21360 and TPP-23411, along with the corresponding isotype control antibody TPP-5657, were labeled with fluorescent dyes. Additionally, commercial antibodies L263G8 and 433H, as well as the mouse antibody SA214G2, were conjugated with the permanent dye BODIPY. These antibodies were lysine-conjugated with 2 to 6 moles of excess FL dye (ester, D2184, Thermo Fisher) at pH 8.3. Following conjugation, the reaction mixture was purified by chromatography (PD10 desalting column, 1–2.5 mL; GE Healthcare) to remove excess dye and adjust the pH. The protein solution was then concentrated (VIVASPIN 500, Fa. Sartoriusstedim Biotec). The dye loading of the antibodies was determined using a spectrophotometer (NanoDrop) and calculated using the formula D: P = Adye εprotein: (A 280 - 0, 16Adye) εdye. The dye loadings of the target-specific antibodies TPP-21360 and TPP-23411, as well as the isotype control antibody, showed similar ranges (dye loading/ab: 4.0 and 4.1). The commercial antibodies elicited dye loading/antibody ratios of 3.8 and 3.9. Conjugation can negatively impact antibody affinity; therefore, testing conjugated antibodies in a cell binding assay (FACS) is crucial to ensure that the label does not alter binding to CCR8 (CD198) (see Figures 31a, 32a, 34a, and b). The conjugated antibodies were then used in an internalization assay using the human CCR8-positive cell line HuT78 and the mouse CCR8-positive cell line BW5147.3. Prior to treatment, CCR8-expressing cell lines (2 x 10⁴ cells/well) were seeded in 100 μl of 96-MTP (CellCarrier Ultra, PerkinElmer) medium. After incubation at 37°C/5% CO₂ for 18 hours, the medium was replaced and different concentrations of labeled antibody (2.5, 1 μg/ml; repeated three times) were added. The same treatment protocol was applied to labeled isotype control antibodies (negative controls). Additionally, the parental CHO-K1 cell line (CCR8-negative cells) was used as a counter for selection (specific control) and similar treatment was performed. Target-specific antibody internalization was studied kinetically. Images were captured at different time points (0 h, 0.5 h, 2 h, 6 h, and 24 h), and internalization efficacy was determined by measuring total internalized fluorescence intensity/cell. Measurements were performed using Operetta CLS (PerkinElmer), and image data were analyzed using Harmony high-content analysis software (PerkinElmer).
图31b和32b显示了HuT78细胞中商业抗人CCR8抗体433H和L263G8以及BW5147.3细胞中商业抗鼠CCR8抗体SA214G2的大量内化,而图33显示了低内化或无内化本发明的抗体TPP-21360和TPP-23411,其基本上与同种型对照相当。Figures 31b and 32b show extensive internalization of commercial anti-human CCR8 antibodies 433H and L263G8 in HuT78 cells and commercial anti-mouse CCR8 antibody SA214G2 in BW5147.3 cells, while Figure 33 shows low or no internalization of the antibodies of the present invention TPP-21360 and TPP-23411, which are essentially equivalent to the isotype control.
表10.5.1:发明抗体和现有技术抗体的内化数据总结。n.a:未测试。Table 10.5.1: Summary of internalization data for inventive and prior art antibodies. n.a: Not tested.
为证实低内化确实是用本文所述的硫酸化肽抗原获得的所有本发明抗CCR8抗体的特征,就其内化行为以囊泡区域/细胞作为读取结果分析了表10.5.2中列出的本发明抗体(也参见图89)。使用已知大量内化的抗CD71抗体作为阳性对照。事实上,所有测试的本发明抗人CCR8抗体都是非内化抗体,即未表现出显著程度的内化的抗体。有趣的是,TPP-17577,唯一在HCDR3中不含组氨酸的测试人抗人抗CCR8抗体显示出比在HCDR3中包含组氨酸的所有测试人抗人抗CCR8抗体更高的内化。To confirm that low internalization is indeed characteristic of all the anti-CCR8 antibodies of the present invention obtained using the sulfated peptide antigen described herein, the antibodies of the present invention listed in Table 10.5.2 were analyzed for their internalization behavior using vesicle regions/cells as reads (see also Figure 89). Anti-CD71 antibodies known to exhibit high internalization were used as positive controls. In fact, all the anti-human CCR8 antibodies of the present invention tested were non-internalizing antibodies, i.e., antibodies that did not show a significant degree of internalization. Interestingly, TPP-17577, the only tested human anti-human anti-CCR8 antibody that did not contain histidine in HCDR3, showed higher internalization than all the tested human anti-human anti-CCR8 antibodies that did contain histidine in HCDR3.
表10.5.2:本发明抗体的内化数据的总结。n.a:未测试。Table 10.5.2: Summary of internalization data for the antibodies of this invention. n.a: Not tested.
实施例10.6.1:抗CCR8抗体的FcRn亲和层析Example 10.6.1: FcRn affinity chromatography of anti-CCR8 antibody
新生儿Fc受体(FcRn)与体内IgG抗体代谢过程的调节有关。在血管内皮细胞核内体的酸性环境中与FcRn结合可保护IgG免受溶酶体降解。IgG从FcRn释放到血流中发生在生理pH 7.4。因此,FcRn在pH<6.5时与IgG结合,在生理pH 7.4时不结合。IgG和FcRn之间的相互作用对IgG的体内药代动力学有影响。通过固定化FcRn模拟抗体循环相互作用来表征pH依赖性的IgG与FcRn的结合,可以揭示有助于其药代动力学的IgG特性。Neonatal Fc receptors (FcRn) are involved in the regulation of IgG antibody metabolism in vivo. Binding of FcRn to the acidic environment of vascular endothelial cell nuclei protects IgG from lysosomal degradation. IgG release from FcRn into the bloodstream occurs at physiological pH 7.4. Therefore, FcRn binds to IgG at pH < 6.5 and does not bind at physiological pH 7.4. The interaction between IgG and FcRn affects the in vivo pharmacokinetics of IgG. Characterizing pH-dependent IgG binding to FcRn by immobilizing FcRn to mimic antibody cycling interactions can reveal IgG properties that contribute to its pharmacokinetic properties.
FcRn亲和力运行在Pure 25层析系统上于25℃下进行。FcRn柱(Roche,订单号8128057001;预装了大约1mL树脂;结合容量:≥100μg IgG)用运行缓冲液A平衡:20mMMES/HCl pH 5.5 140mM NaCl。将30μL的每种抗体(在平衡缓冲液中为1mg/mL)上样到色谱柱。通过增加运行缓冲液B 20mM Tris/HCl pH 8.8 140mM NaCl的百分比产生线性pH梯度,如下所示:0分钟-20%B,10分钟-20%B,80分钟-100%B,90分钟-100%B,93分钟-20%B,103分钟-20%B。流速为0.5mL/min。监测洗脱点的pH值并从Unicorn 7.1生成的色谱图中读取。FcRn affinity assays were performed on a Pure 25 chromatography system at 25°C. The FcRn column (Roche, order number 8128057001; pre-packed with approximately 1 mL of resin; binding capacity: ≥100 μg IgG) was equilibrated with run buffer A: 20 mM Tris/HCl, pH 5.5, 140 mM NaCl. 30 μL of each antibody (1 mg/mL in equilibration buffer) was loaded onto the column. A linear pH gradient was generated by increasing the percentage of run buffer B (20 mM Tris/HCl, pH 8.8, 140 mM NaCl) as follows: 0 min - 20% B, 10 min - 20% B, 80 min - 100% B, 90 min - 100% B, 93 min - 20% B, 103 min - 20% B. The flow rate was 0.5 mL/min. Monitor the pH value at the elution point and read it from the chromatogram generated by Unicorn 7.1.
从表10.6.1.1可以看出,现有技术抗体Ustekinumab作为标准药代动力学的对照,现有技术抗体Briakinumab作为快速药代动力学的对照(参见Schoch,Angela,et al.″Charge-mediated influence of the antibody variable domain on FcRn-dependentpharmacokinetics.″Proceedings of the National Academy of Sciences 112.19(2015):5997-6002)。TPP-17577、TPP-18205、TPP-27495、TPP-21047和TPP-27496显示出大于pH 7.5的洗脱pH,并且可以认为在pH 7.4至pH7.5下也显示出与FcRn的结合。测得的pH值可用于预测抗体的清除率和半衰期。As shown in Table 10.6.1.1, the prior art antibody Ustekinumab was used as a standard pharmacokinetic control, and the prior art antibody Briakinumab was used as a rapid pharmacokinetic control (see Schoch, Angela, et al. "Charge-mediated influence of the antibody variable domain on FcRn-dependent pharmacokinetics." Proceedings of the National Academy of Sciences 112.19 (2015): 5997-6002). TPP-17577, TPP-18205, TPP-27495, TPP-21047, and TPP-27496 showed elution pH values greater than pH 7.5 and can be considered to show binding to FcRn at pH 7.4 to pH 7.5. The measured pH values can be used to predict antibody clearance and half-life.
表10.6.1.1:不同抗体的FcRn亲和层析:洗脱时的pH。两个pH值表示双峰。Table 10.6.1.1: FcRn affinity chromatography for different antibodies: pH during elution. The two pH values represent biphasic peaks.
实施例10.6.2:基于SPR的FcRn结合分析Example 10.6.2: SPR-based FcRn binding analysis
为了评估抗CCR8抗体对FcRn的结合亲和力,使用SPR在pH 6.0和pH 7.4研究了结合。结合测定在Biacore T200仪器上在25℃下使用CM5传感器芯片和测定缓冲液PBST进行。对于FcRn结合测定,将人、小鼠或食蟹猴FcRn胺偶联到CM5传感器芯片表面(~300RU),并将IgG以15.6-2.000nM的浓度注入PBST,pH 6。再生是用PBST pH 7.4进行。在另一项仅在pH7.4下进行的实验中,IgG以2μM的一个浓度进行测试,因此仅在发生结合时才对其进行定性评估。KD值来自稳态亲和力分析以及通过拟合1∶1结合等温线的动力学分析。To assess the binding affinity of anti-CCR8 antibody to FcRn, binding was investigated using SPR at pH 6.0 and pH 7.4. Binding assays were performed on a Biacore T200 instrument at 25 °C using a CM5 sensor chip and assay buffer PBST. For FcRn binding assays, human, mouse, or cynomolgus monkey FcRn amines were coupled to the surface of the CM5 sensor chip (~300 RU), and IgG was injected into PBST at concentrations of 15.6–2,000 nM at pH 6. Regeneration was performed using PBST at pH 7.4. In another experiment conducted only at pH 7.4, IgG was tested at a concentration of 2 μM, thus qualitative assessment was only performed upon binding. KD values were derived from steady-state affinity analysis and kinetic analysis by fitting 1:1 binding isotherms.
从表10.6.2.1可以看出,如前所述,Ustekinumab作为阳性对照,Briakinumab作为阴性对照,如Schoch et al,2015所描述。这两种抗体对FcRn的亲和力没有显著差异,但它们在pH 7.4时对FcRn的结合应答存在差异。因此,可以假设在pH 7.4下表现出结合应答的抗体可能具有加速的体内半衰期。As shown in Table 10.6.2.1, as previously described, Ustekinumab was used as a positive control and Briakinumab as a negative control, as described by Schoch et al., 2015. These two antibodies did not show a significant difference in affinity for FcRn, but their binding responses to FcRn at pH 7.4 differed. Therefore, it can be hypothesized that the antibody exhibiting a binding response at pH 7.4 may have an accelerated in vivo half-life.
实施例10.7:抗CCR8抗体的肝素亲和层析Example 10.7: Heparin affinity chromatography of anti-CCR8 antibody
对于本发明的识别人CCR8的抗体,很可能是电荷介导的相互作用,因为抗体识别带电荷的抗原酪氨酸基序并具有特定的结构组成,例如关于他们的HCDR3。然而,除了在pH7.4下结合FcRn之外,电荷介导的相互作用是IgG降解的驱动力。与单核细胞或巨噬细胞的带负电荷的糖萼结合可能导致胞饮作用和随后的蛋白水解降解。Kraft et al.表明当与FcRn层析一起进行肝素亲和层析时,可以更有效和准确地预测体内抗体行为(Kraft,Thomas E.,et al.″Heparin chromatography as an in vitro predictor for antibodyclearance rate through pinocytosis.″MAbs.Vol.12.No.1.Taylor&Francis,2020)。For the antibodies of this invention that recognize human CCR8, it is likely that the interaction is charge-mediated, as the antibodies recognize charged antigen tyrosine motifs and have specific structural compositions, such as HCDR3. However, apart from binding FcRn at pH 7.4, charge-mediated interactions are a driving force for IgG degradation. Binding to the negatively charged glycocalyx of monocytes or macrophages may lead to pinocytosis and subsequent proteolytic degradation. Kraft et al. showed that heparin affinity chromatography, when performed in conjunction with FcRn chromatography, can more effectively and accurately predict antibody behavior in vivo (Kraft, Thomas E., et al. "Heparin chromatography as an in vivo predictor for antibody clearance rate through pinocytosis." MAbs. Vol. 12. No. 1. Taylor & Francis, 2020).
表10.6.2.1:本发明抗体对不同FCRN受体的亲和力的SPR分析。Table 10.6.2.1: SPR analysis of the affinity of the antibodies of the present invention for different FCRN receptors.
小结合应答定义为<30RU的应答,结合应答为>30RU。Small binding response is defined as a response <30RU, and binding response is defined as >30RU.
高亲和力、高水平的相互作用以及因此的高保留时间可以预示测试抗体的半衰期较短。肝素亲和力运行在Pure 25层析系统上于25℃下进行。乙酰肝素柱(Tosoh)用运行缓冲液A平衡:50mM TRIS,pH 7.4。将50μL的每种抗体(在20mM组氨酸pH 5.5中为1mg/mL)上样到柱上。通过增加运行缓冲液B 20mM Tris pH 7.41M NaCl的百分比生成线性盐梯度,如下所示:注射后2分钟-0%B,0-55%B超过16.5分钟,100%超过0.5分钟,100%B四分钟。流速为0.8mL/min。监测洗脱时间并从Unicorn 7.1生成的色谱图中读取。High affinity, high levels of interaction, and therefore high retention times can predict a short half-life of the test antibody. Heparin affinity tests were performed on a Pure 25 chromatography system at 25°C. Heparin columns (Tosoh) were equilibrated with run buffer A: 50 mM Tris, pH 7.4. 50 μL of each antibody (1 mg/mL at 20 mM histidine, pH 5.5) was loaded onto the column. A linear salt gradient was generated by increasing the percentage of run buffer B (20 mM Tris, pH 7.4, 1 M NaCl) as follows: 2 min post-injection - 0% B, 0-55% B over 16.5 min, 100% over 0.5 min, 100% B over 4 min. The flow rate was 0.8 mL/min. Elution times were monitored and read from the chromatograms generated by the Unicorn 7.1.
从表10.7.1可以看出,并且如前所述,Ustekinumab作为阳性对照,Briakinumab作为阴性对照。大多数测试的本发明抗体集中在15至18分钟的保留时间附近。因此,如果静电相互作用在体内起作用,这些抗体可能会显示出缩短的半衰期。As can be seen from Table 10.7.1, and as previously stated, Ustekinumab was used as a positive control and Briakinumab as a negative control. Most of the antibodies tested showed retention times around 15 to 18 minutes. Therefore, these antibodies may exhibit shortened half-lives if electrostatic interactions are at play in vivo.
表10.7.1:不同抗体的肝素亲和层析:洗脱时的pH。Table 10.7.1: Heparin affinity chromatography for different antibodies: pH during elution.
实施例10.8:食蟹猴中的毒性研究和CCR8耗竭Example 10.8: Toxicity Study and CCR8 Depletion in Crab-Eating Macaques
食蟹猴用50mg/kg的TPP-23411处理四个星期。这些动物没有表现出中毒迹象。在最后一次治疗后一周,使用RNA-seq分析胸腺组织(在健康组织中具有最高水平的CCR8)。在用抗CCR8抗体治疗的动物中,发现CCR8 mRNA水平显著降低。在较低剂量的TPP-23411下,未发现CCR8水平显著降低。Crab-eating macaques were treated with 50 mg/kg of TPP-23411 for four weeks. These animals showed no signs of toxicity. One week after the last treatment, thymus tissue (which has the highest levels of CCR8 in healthy tissue) was analyzed using RNA-seq. A significant decrease in CCR8 mRNA levels was found in animals treated with anti-CCR8 antibodies. No significant decrease in CCR8 levels was found at lower doses of TPP-23411.
实施例11:靶标的治疗适用性Example 11: Therapeutic Applicability of the Target
对于免疫肿瘤学中特定靶标的治疗用途,靶标的特异性表达对于最大限度地减少全身副作用至关重要。靶标应对目标组织或细胞具有特异性,例如用于肿瘤内Treg,不得在健康组织上表达。此外,靶标在特定肿瘤组织中的表达增加可能指向该适应症的医学用途。例如,CCR8也在B细胞淋巴瘤和T细胞淋巴瘤肿瘤细胞系中表达。For therapeutic applications of specific targets in immuno-oncology, target-specific expression is crucial for minimizing systemic side effects. Targets should be specific to the target tissue or cell; for example, for intratumoral Tregs, they should not be expressed in healthy tissues. Furthermore, increased expression of a target in specific tumor tissues may indicate medical use for that indication. For example, CCR8 is also expressed in B-cell lymphoma and T-cell lymphoma tumor cell lines.
全身性去除Treg细胞不仅可以激发和增强肿瘤免疫力,还可以激发和增强自身免疫力,这在患有免疫失调-多内分泌病-肠病-X连锁(IPEX)综合征的患者身上得到了证明。在这种疾病中,患者由于基因改变而缺乏Tregs,如果没有接受适当的免疫抑制治疗,患者会在出生后的前2年内因全身性自身免疫而死亡。因此,认为旨在去除或抑制肿瘤内Treg的靶标的高特异性对于避免治疗性抗体的副作用非常重要,例如针对CCR4靶向抗体观察到的副作用。Systemic depletion of Treg cells can stimulate and enhance not only tumor immunity but also autoimmunity, as demonstrated in patients with Immune Dysfunction-Multi-Endocrine Disorder-Enteropathy-X-Linked (IPEX) syndrome. In this disease, patients lack Tregs due to genetic alterations and, without appropriate immunosuppressive therapy, will die within the first two years of life due to systemic autoimmunity. Therefore, high specificity of targets aimed at depleting or inhibiting intratumoral Tregs is considered crucial to avoiding the side effects of therapeutic antibodies, such as those observed with CCR4-targeting antibodies.
实施例11.1:靶标CCR8的特异性Example 11.1: Specificity of the target CCR8
在第一项分析中,发明人评估了CCR8 mRNA在不同人体组织和细胞类型中的表达。仅在激活的调节性T细胞以及肿瘤浸润淋巴细胞中观察到CCR8 mRNA的显著表达(图35)。In the first analysis, the inventors assessed the expression of CCR8 mRNA in different human tissues and cell types. Significant expression of CCR8 mRNA was observed only in activated regulatory T cells and tumor-infiltrating lymphocytes (Figure 35).
在第二项分析中,发明人评估了50种不同肿瘤适应症中的CCR8mRNA表达。具有最高CCR8表达的适应症是例如乳腺癌、肺腺癌(ADC)、睾丸癌、胃癌和鳞状细胞癌(SCC)、头颈部恶性肿瘤以及食管肿瘤,但在结直肠癌、卵巢癌和宫颈癌中也有高表达。在除胰腺癌和黑色素瘤以外的所有适应症中,发现与相应的正常组织相比,肿瘤中的表达更高(图36)。In the second analysis, the inventors evaluated CCR8 mRNA expression in 50 different tumor indications. Indications with the highest CCR8 expression included, for example, breast cancer, lung adenocarcinoma (ADC), testicular cancer, gastric cancer and squamous cell carcinoma (SCC), head and neck malignancies, and esophageal tumors, but high expression was also found in colorectal cancer, ovarian cancer, and cervical cancer. In all indications except pancreatic cancer and melanoma, higher expression was found in tumors compared to the corresponding normal tissues (Figure 36).
在第三项分析中,发明人评估了CCR8 mRNA与FOXP3 mRNA在各种肿瘤适应症中的共表达。与Treg标记FOXP3的共表达对于证明CCR8确实主要在Tregs上表达很重要,参见表11.1.1。IHC染色证实了这些发现,见图37。In the third analysis, the inventors assessed the co-expression of CCR8 mRNA and FOXP3 mRNA across various tumor indications. Co-expression with the Treg marker FOXP3 was important in demonstrating that CCR8 is indeed primarily expressed on Tregs (see Table 11.1.1). IHC staining confirmed these findings (see Figure 37).
表11.1.1:CCR8和调节性T细胞定义标志物FOXP3是所有9588个TCGA肿瘤样本(不包括作为适应症的胸腺瘤)中最密切相关的基因,表明这些基因在同一细胞类型中共表达。该表显示了与CCR8和FOXP3 mRNA表达水平及其各自的Pearson相关系数r最密切相关的25个基因(在35021个基因中)。Table 11.1.1: CCR8 and the regulatory T cell defining marker FOXP3 were the most closely associated genes in all 9588 TCGA tumor samples (excluding thymoma as an indication), indicating that these genes are co-expressed in the same cell type. This table shows the 25 genes (out of 35021 genes) most closely associated with CCR8 and FOXP3 mRNA expression levels and their respective Pearson correlation coefficients r.
此外,还评估了CCR8 mRNA与泛T细胞标志物CD3、细胞毒性T细胞标志物CD8、巨噬细胞标志物MS4A7、一般炎症标志物IFNg和B细胞标志物CD1 9、CD20、CD22的相关性,用于50种肿瘤适应症,参见表11.1.2。有趣的是,对于几乎所有适应症,相关性都非常显著,表明在免疫细胞浸润到肿瘤本身,尤其是T reg浸润时,CCR8的表达增加。由此可以预期,免疫细胞浸润,特别是T细胞浸润同样是有价值的生物标志物,可用于患者分层以识别更有可能从抗CCR8疗法中获益的患者。Furthermore, the correlations between CCR8 mRNA and pan-T cell marker CD3, cytotoxic T cell marker CD8, macrophage marker MS4A7, general inflammatory marker IFNg, and B cell markers CD19, CD20, and CD22 were evaluated for 50 oncology indications (see Table 11.1.2). Interestingly, the correlations were highly significant for almost all indications, indicating increased CCR8 expression when immune cells infiltrate the tumor itself, particularly T-reg infiltration. Therefore, it can be expected that immune cell infiltration, especially T-cell infiltration, is also a valuable biomarker that can be used for patient stratification to identify patients more likely to benefit from anti-CCR8 therapy.
表11.1.2:CCR8和Treg标志物FOXP3、泛T细胞标志物CD3、细胞毒性T细胞标志物CD8、巨噬细胞标志物MS4A7、一般炎症标志物IFNg或B细胞标志物CD19、CD20、CD22的log2mRNA水平之间的Pearson相关系数r。结果表明,在TCGA的50种适应症中,有48种CCR8与免疫细胞特别是T reg浸润到肿瘤中具有高度显著的共表达。因此可以预期,例如T细胞浸润构成了一种有价值的分层生物标志物,用于识别可能从抗CCR8疗法中获益的患者。Table 11.1.2: Pearson correlation coefficients (r) between the log2 mRNA levels of CCR8 and Treg markers FOXP3, pan-T cell marker CD3, cytotoxic T cell marker CD8, macrophage marker MS4A7, general inflammatory marker IFNg, or B cell markers CD19, CD20, and CD22. The results indicate that in 48 out of 50 indications for TCGA, CCR8 is highly significantly co-expressed with immune cells, particularly T reg infiltration into tumors. Therefore, it can be expected that, for example, T cell infiltration constitutes a valuable stratified biomarker for identifying patients who may benefit from anti-CCR8 therapy.
实施例11.2:与T效应细胞相比,CCR8对肿瘤内Treg的特异性Example 11.2: CCR8's specificity against intratumoral Tregs compared to T effector cells
关于人类癌症免疫疗法的Treg耗竭,有几个问题需要考虑。Treg和激活的效应T细胞通常共享相同类型的细胞表面分子的表达,包括CD25和CTLA-4,这使得很难在不影响这些效应T细胞的情况下用这些分子特异性抗体来选择性地耗竭Treg。Several issues need to be considered regarding Treg depletion in human cancer immunotherapy. Tregs and activated effector T cells often share the expression of the same types of cell surface molecules, including CD25 and CTLA-4, making it difficult to selectively deplete Tregs with molecules-specific antibodies without affecting these effector T cells.
肿瘤中的Foxp3+CD25+CD4+Treg细胞(肿瘤浸润或肿瘤内Treg)相比于淋巴或非淋巴组织或血液中的Tregs,表达更高水平的与T细胞激活相关的细胞表面分子,例如CD25、CTLA-4、PD-1、LAG3、TIGIT、ICOS、和TNF受体超家族成员包括4-1BB、OX-40和GITR。此外,肿瘤浸润性Treg表达高水平的特异性趋化因子受体,包括CCR4和CCR8。Foxp3+CD25+CD4+ Treg cells in tumors (tumor-infiltrating or intratumoral Tregs) express higher levels of cell surface molecules associated with T cell activation, such as CD25, CTLA-4, PD-1, LAG3, TIGIT, ICOS, and TNF receptor superfamily members including 4-1BB, OX-40, and GITR, compared to Tregs in lymphoid or non-lymphoid tissues or blood. Furthermore, tumor-infiltrating Tregs express high levels of specific chemokine receptors, including CCR4 and CCR8.
CD4+CD25+分选和未分选的PBMC用抗CD3和抗CD28珠子+IL2激活6天。FACS分析显示CCR8蛋白表达优先在受刺激的Tregs(CD4+CD25+FoxP3+CD127dim)上表达,参见图38。替代靶标OX40、GITR和CD25但不是CCR8在受刺激的CD8+Teff细胞和CD4+T细胞(CD4+CD25+Foxp3-)上显著表达。CCR4显示Treg特异性表达,但没有肿瘤内T reg特异性。这些发现与CCR4抗体显示出免疫学副作用的观察结果一致,这归因于Treg的系统性耗竭。就特异性而言,CCR8似乎在支持肿瘤内Treg的特异性耗竭上更优异。CD4+CD25+ sorted and unsorted PBMCs were activated for 6 days with anti-CD3 and anti-CD28 beads + IL2. FACS analysis showed that CCR8 protein expression was preferentially expressed on stimulated Tregs (CD4+CD25+FoxP3+CD127dim) (see Figure 38). Alternative targets OX40, GITR, and CD25, but not CCR8, were significantly expressed on stimulated CD8+ Teff cells and CD4+ T cells (CD4+CD25+Foxp3-). CCR4 showed Treg-specific expression but not intratumoral Treg specificity. These findings are consistent with observations of immunological side effects from CCR4 antibodies, attributed to systemic Treg depletion. In terms of specificity, CCR8 appears to be superior in supporting the specific depletion of intratumoral Tregs.
为了证实这些发现,从Guo,Xinyi,et al.″Global characterization of Tcells in non-small-cell lung cancer by single-cell sequencing.″Naturemedicine 24.7(2018):978-985,Zhang,Yuanyuan,et al.″Deep single-cell RNAsequencing data of individual T cellsfrom treatment-colorectal cancerpatients.″Scientific data 6.1(2019):1-15,and Zheng,Chunhong,et al.″Landscapeof infiltrating T cells in liver cancer revealed by single-cellsequencing.Cell 169.7(2017):1342-1356分别获取NSCLC,CRC和肝癌的原始数据,用于分析CCR8特异性,见图39。事实上,对于这些肿瘤,CCR8 mRNA表达主要局限于存在于肿瘤组织中的调节性T细胞(浅灰色框),而大部分在正常组织的调节性T细胞以及CD4辅助性T细胞和CD8细胞毒性T细胞(分别为中灰色和深灰色框)中不存在。To confirm these findings, refer to Guo, Xinyi, et al. "Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing." Nature Medicine 24.7 (2018): 978-985, and Zhang, Yuanyuan, et al. "Deep single-cell RNA sequencing data of individual T cells from treatment-colorectal cancer patients." Scientific data 6. 1(2019): 1-15, and Zheng, Chunhong, et al. "Landscape of infiltrating T cells in liver cancer revealed by single-cell sequencing. Cell 169.7(2017): 1342-1356". Raw data for NSCLC, CRC, and liver cancer were obtained to analyze CCR8 specificity, as shown in Figure 39. In fact, for these tumors, CCR8 mRNA expression was mainly limited to regulatory T cells present in tumor tissue (light gray box), while most of it was absent in regulatory T cells, CD4 helper T cells, and CD8 cytotoxic T cells in normal tissue (medium gray and dark gray boxes, respectively).
人肿瘤裂解物样品的FACS分析证实,CCR8蛋白在非小细胞肺癌(NSCLC)、结直肠癌(CRC)、肾细胞癌(RCC)和淋巴结(LNs,数据未显示)的人肿瘤浸润Treg上特异性表达,图40。高达90%的肿瘤浸润Treg为CCR8阳性,例如在NSCLC中,III+期为40-90%,在I/II期为40-70%,在CRC中为III+期20-40%,在RCC中为III+期40-50%。基于这些数据,认为根据分期进行分层会为接受抗CCR8抗体治疗的患者带来进一步的益处。FACS analysis of human tumor lysate samples confirmed that the CCR8 protein is specifically expressed on human tumor-infiltrating Tregs in non-small cell lung cancer (NSCLC), colorectal cancer (CRC), renal cell carcinoma (RCC), and lymph nodes (LNs, data not shown) (Figure 40). Up to 90% of tumor-infiltrating Tregs are CCR8 positive; for example, in NSCLC, 40-90% for stage III+, 40-70% for stage I/II, 20-40% for stage III+ in CRC, and 40-50% for stage III+ in RCC. Based on these data, it is believed that stratification according to stage would provide further benefit to patients receiving anti-CCR8 antibody therapy.
实施例12:体内实验Example 12: In vivo experiment
实施例12.1.1:替代抗体和同基因肿瘤模型Example 12.1.1: Alternative Antibodies and Homogeneous Tumor Models
在小鼠实验中,结合小鼠CCR8的替代抗体被用于证明抗肿瘤功效并表征作用方式,即肿瘤内的Treg消耗取决于ADCC(抗体依赖性细胞毒性)和ADCP(抗体依赖性细胞吞噬作用)效力。In mouse experiments, alternative antibodies binding to mouse CCR8 were used to demonstrate antitumor efficacy and characterize the mechanism of action, namely that the consumption of Tregs within the tumor depends on the efficacy of ADCC (antibody-dependent cytotoxicity) and ADCP (antibody-dependent phagocytosis).
表12.1.1.1:用于体内研究的替代抗小鼠CCR8抗体列表。使用过表达鼠类CCR8的HEK293细胞作为靶细胞,使用NK92细胞作为效应细胞来确ADCC。ADCC活性通过乳酸脱氢酶(LDH)释放来测量。Table 12.1.1.1: List of alternative anti-mouse CCR8 antibodies used in in vivo studies. HEK293 cells overexpressing mouse CCR8 were used as target cells, and NK92 cells were used as effector cells to determine ADCC. ADCC activity was measured by lactate dehydrogenase (LDH) release.
抗鼠CCR8抗体TPP-14099以3nM的EC50结合表达鼠CCR8的CHO细胞和以13.2nM的EC50结合鼠iTreg,如通过FACS所确定的(数据未显示)。The anti-mouse CCR8 antibody TPP-14099 bound CHO cells expressing mouse CCR8 at 3 nM EC50 and mouse iTregs at 13.2 nM EC50, as determined by FACS (data not shown).
不同的同基因肿瘤模型被用于模拟具有高度免疫浸润的肿瘤以及具有低程度免疫细胞浸润的肿瘤。此外,所使用的模型对已知检查点抑制剂治疗的应答存在偏差,例如用抗CTLA4、抗PD 1或抗PD-L1抗体治疗。表12.1.1.2中显示了测试肿瘤模型的概览,其中包含本发明抗CCR8抗体的功效数据。值得注意的是,在各种同基因肿瘤模型中证明了疗效。Different syngeneic tumor models were used to simulate tumors with high immune infiltration and tumors with low levels of immune cell infiltration. Furthermore, the models used showed biased responses to known checkpoint inhibitor treatments, such as those with anti-CTLA4, anti-PD1, or anti-PD-L1 antibodies. Table 12.1.1.2 shows an overview of the tested tumor models, including efficacy data for the anti-CCR8 antibody of this invention. Notably, efficacy was demonstrated in various syngeneic tumor models.
简而言之,将每100μl PBS、培养基或50%Matrigel混合物通常含有500.000-1.000.000个肿瘤细胞的悬浮液皮下注射到雌性免疫小鼠(例如Balb/c、C57B16)的侧腹。在约60-100立方毫米(通常为100立方毫米)的可触及肿瘤大小下,CCR8抗体施用开始时通常以5-10ml/kg的体积进行10mg/kg的腹膜内注射。在剂量滴定研究中,测试了较低的剂量。各自同种型的非结合抗体用作对照。组包括n=10只小鼠。治疗每周应用两次,通常作为q3/4d时间表,每周测量3次肿瘤大小和体重。肿瘤生长数据绘制为随时间变化的平均体积。In short, a suspension containing 500,000–1,000,000 tumor cells per 100 μl of PBS, culture medium, or 50% Matrigel mixture was subcutaneously injected into the flank of female immunized mice (e.g., Balb/c, C57B16). At a palpable tumor size of approximately 60–100 cubic millimeters (typically 100 cubic millimeters), CCR8 antibody administration was initially initiated with an intraperitoneal injection of 10 mg/kg at a volume of 5–10 ml/kg. Lower doses were tested in dose titration studies. Non-binding antibodies of their respective isotypes served as controls. Groups consisted of n = 10 mice. Treatment was administered twice weekly, typically on a q3/4-day schedule, with tumor size and body weight measured three times weekly. Tumor growth data were plotted as mean volume over time.
在二抗治疗后24小时,肿瘤和组织样本取自经过相同处理的卫星动物(每组n=5),并在解离成单细胞和红细胞裂解后通过流式细胞术进行分析,特别关注每100mg组织中调节性T细胞(Treg)的绝对数量的变化。用于确定激活的Treg的标志物是CD45+CD4+CD25+FoxP3+。其他FACS标志物包括CD8、NKp46、4-1BB、F4/80、CD11c、Gr1和MHCII。Twenty-four hours after secondary antibody therapy, tumor and tissue samples were obtained from satellite animals that had undergone the same treatment (n=5 per group) and analyzed by flow cytometry after dissociation into single cells and erythrocyte lysis, with particular attention paid to changes in the absolute number of regulatory T cells (Tregs) per 100 mg of tissue. The markers used to identify activated Tregs were CD45+CD4+CD25+FoxP3+. Other FACS markers included CD8, NKp46, 4-1BB, F4/80, CD11c, Gr1, and MHCII.
表12.1.1.2:具有表征治疗结果的参数的不同肿瘤模型的概述。基于同基因小鼠肿瘤模型中抗CCR8替代抗体的最终肿瘤体积,通过Treg耗竭、总体响应率和肿瘤对照的比率来测量功效。1Treg耗竭计算为同种型对照中肿瘤内Treg与用治疗性抗体治疗的肿瘤中的肿瘤内Treg之间的百分比差异。2总缓解率(ORR)和完全缓解(CR)基于RECIST标准对小鼠模型中肿瘤快速生长的适应性(CR:完全缓解(<初始肿瘤体积的10%);PR:部分缓解(最大300%的初始肿瘤体积);NR:无响应者(>300%的初始肿瘤体积))。3T/C指研究结束时治疗肿瘤体积/对照肿瘤体积。n.d.:未确定。4该肿瘤模型中几项研究的平均值。Table 12.1.1.2: Overview of different tumor models with parameters characterizing treatment outcomes. Efficacy was measured by Treg depletion, overall response rate, and tumor-to-control ratio based on the final tumor volume of the anti-CCR8 alternative antibody in the syngeneic mouse tumor model. 1 Treg depletion was calculated as the percentage difference between intratumoral Tregs in the syngeneic control and intratumoral Tregs in the tumor treated with the therapeutic antibody. 2 Overall response rate (ORR) and complete response (CR) were based on RECIST criteria for adaptation to rapid tumor growth in the mouse model (CR: complete response (<10% of initial tumor volume); PR: partial response (maximum 300% of initial tumor volume); NR: non-responder (>300% of initial tumor volume)). 3 T/C refers to the treated tumor volume/control tumor volume at the end of the study. nd: undetermined. 4 Mean values from several studies in this tumor model.
对于每个同基因小鼠肿瘤模型,同种型对照组和抗CCR8治疗组中的10个肿瘤在治疗周期结束时、最后一次治疗后24小时(每两周治疗一次,直到任一组中的肿瘤达到3000mm3的平均体积)收获,并通过RNA-seq测量全基因组mRNA表达。在通过RNA-seq评估的17个模型中,13个模型与对照组相比显示出抗CCR8治疗组的CD8mRNA水平升高,其倍数变化如表12.1.1.3所示。对于CT26、H22、RM1、MBT2和Hepa1-6模型,根据T检验统计,CD8水平的增加是显著的,表明在治疗周期结束时细胞毒性T细胞浸润显著增加。这些数据强烈表明CD8+细胞参与影响肿瘤响应。For each syngeneic mouse tumor model, 10 tumors from the isotype control group and the anti-CCR8 treatment group were harvested at the end of the treatment cycle, 24 hours after the last treatment (treated every two weeks until the tumors in either group reached an average volume of 3000 mm³ ), and whole-genome mRNA expression was measured by RNA-seq. Of the 17 models evaluated by RNA-seq, 13 showed increased CD8 mRNA levels in the anti-CCR8 treatment group compared to the control group, with fold changes shown in Table 12.1.1.3. For the CT26, H22, RM1, MBT2, and Hepa1-6 models, the increase in CD8 levels was significant according to the T-test, indicating a significant increase in cytotoxic T cell infiltration at the end of the treatment cycle. These data strongly suggest that CD8+ cells are involved in influencing tumor response.
表12.1.1.3:抗CCR8处理诱导的CD8 mRNA水平的变化。Table 12.1.1.3: Changes in CD8 mRNA levels induced by anti-CCR8 treatment.
实施例12.1.2:用于生物标志物识别的同基因模型表征Example 12.1.2: Homogeneous model characterization for biomarker identification
基于来自同基因模型的早期肿瘤的全基因组RNA-seq数据,发现以下基因水平的升高与肿瘤响应密切相关:Eif3j2,Eno1b,Ifi441,Hist1h2al,Ifi202b,Hmga1b,Amd2,Sycp1,Itln1,Trim34b,Catsperg2,Zfp868,Serpina1b,Prss41,C1rb,Cyld,Ccnb1ip1,Masp2,Acaa1b,C4a,Snord93,Abhd1,Serpina3h,H2-K2,Cd1d2,Hal,Rnf151,Rbm46,Arg2,Mir8099-2,Igsf21,Olfr373,C1s2,Crym,Arv1,Hddc3,Plppr4,Ppp1rl1,Rps3a2,Zfp459,Rnd1,Serpina1a,Vcpkmt,Atp10d,Gbp2b,H2-T24,Tlcd2,Ctse,H2-Q10,Cyp2c55,Borcs8,Tpsab1,Trim43b,Cc2d1a,Serpina1d,Cacnala,Kcnj14,Ttc13,Farsa,Olfr1217,Jaml,H2-Bl,Tnpo2,Rims3,Dock9,Car5b,Atpla4,H2-Q1,Zfp69,Slpi,Pcdhgb8,Ocel1,Selenbp2,Nsd3,Wt1,Nap112,Ranbp9,Gtpbp3,AY761185,Rnaset2a,Serpina3i,Ell2,Gal3st2b,Urb2,F12,Klk1,Ifi214,Cstl1,Agtpbp1,Msh5,Cox18,Zfp330,Ttc37,Klk4,H2-Q5,Cxcl11,Rab39,Pm20d1,Nod2,H2-DMb2。有趣的是,该集合高度富集了早期补体因子、补体调节因子(如Serpins)和MHC组分。这些标志物或其组合可用于分层或预测或监测肿瘤响应。特别是,高水平补体C1/C4的存在可能有助于Treg裂解。当补体因子的耗竭/消耗降低Treg耗竭的功效时,补充补体系统,例如在联合治疗中可能是一种选择。Based on genome-wide RNA-seq data from early-stage tumors of an endogenetic model, elevated levels of the following genes were found to be closely associated with tumor response: Eif3j2, Eno1b, Ifi441, Hist1h2al, Ifi202b, Hmga1b, Amd2, Sycp1, Itln1, Trim34b, Catsperg2, Zfp868, Serpina1b, Prss41, C1rb, Cyld, Ccnb1ip1, Masp2, A caa1b, C4a, Snord93, Abhd1, Serpina3h, H2-K2, Cd1d2, Hal, Rnf151, Rbm46, Arg2, Mir8099-2, Igsf21, Olfr3 73, C1s2, Crym, Arv1, Hddc3, Plppr4, Ppp1rl1, Rps3a2, Zfp459, Rnd1, Serpina1a, Vcpkmt, Atp10d, Gbp2b, H2- T24, Tlcd2, Ctse, H2-Q10, Cyp2c55, Borcs8, Tpsab1, Trim43b, Cc2d1a, Serpina1d, Cacnala, Kcnj14, Ttc13, Farsa, Olfr1217, Jaml, H2-Bl, Tnpo2, Rims3, Dock9, Car5b, Atpla4, H2-Q1, Zfp69, Slpi, Pcdhgb8, Ocel1, Sel The biomarkers included enbp2, Nsd3, Wt1, Nap112, Ranbp9, Gtpbp3, AY761185, Rnaset2a, Serpina3i, Ell2, Gal3st2b, Urb2, F12, Klk1, Ifi214, Cstl1, Agptpbp1, Msh5, Cox18, Zfp330, Ttc37, Klk4, H2-Q5, Cxcl11, Rab39, Pm20d1, Nod2, and H2-DMb2. Interestingly, this set was highly enriched for early complement factors, complement regulators (such as Serpins), and MHC components. These biomarkers, or combinations thereof, could be used to stratify, predict, or monitor tumor responses. In particular, the presence of high levels of complement C1/C4 may contribute to Treg lysis. When the depletion/consumption of complement factors reduces the effectiveness of Treg depletion, supplementing the complement system, for example in combination therapy, may be an option.
不同的同基因模型进一步表征了免疫细胞亚群的绝对数量和肿瘤中总CD45+免疫细胞的频率。对于通过流式细胞术分析的模型(表12.1.2.1),B16F10的特点是免疫细胞数量最少-并且肿瘤体积减少最少,参见表12.1.2.1。因此,免疫细胞浸润可用于分层以预测对CCR8抗体治疗的应答。这个假设后来可以用B16Bl6来证实。Different syngeneic models further characterized the absolute number of immune cell subsets and the frequency of total CD45+ immune cells in the tumor. For the models analyzed by flow cytometry (Table 12.1.2.1), B16F10 was characterized by the lowest number of immune cells—and the least reduction in tumor volume, see Table 12.1.2.1. Therefore, immune cell infiltration can be used to stratify and predict response to CCR8 antibody therapy. This hypothesis was later confirmed using B16Bl6.
表12.1.2.1:通过在早期时间点(第二次治疗后24小时)分析的载剂组肿瘤中免疫细胞亚群的绝对数量和总CD45+免疫细胞内的频率表征肿瘤微环境。T/C vol描述了研究结束时CCR8抗体治疗组(10mg/kg,每周两次)与对照组的肿瘤体积比率。Table 12.1.2.1: The tumor microenvironment was characterized by the absolute number of immune cell subsets and the frequency of total CD45+ immune cells in the tumors of the load-treated group analyzed at an early time point (24 hours after the second treatment). T/C vol describes the tumor volume ratio of the CCR8 antibody treatment group (10 mg/kg, twice weekly) to the control group at the end of the study.
实施例12.2:在CT26荷瘤小鼠中的功效Example 12.2: Efficacy in CT26 tumor-bearing mice
用抗CCR8抗体TPP-15285和TPP-15286治疗在CT26荷瘤小鼠中显示出很强的抗肿瘤功效(图41)。TPP-15285在0.1mg/kg的最低剂量下显示疗效降低,其他剂量依赖性差异不显著。正如预期的那样,抗PD-L1抗体(“PDL1”)在模型中表现出中等功效。各同种型的非结合抗体未显示任何功效。Treatment with anti-CCR8 antibodies TPP-15285 and TPP-15286 in CT26 tumor-bearing mice demonstrated potent antitumor efficacy (Figure 41). TPP-15285 showed reduced efficacy at the lowest dose of 0.1 mg/kg, with no significant differences at other dose-dependent levels. As expected, the anti-PD-L1 antibody (“PDL1”) exhibited moderate efficacy in the model. No efficacy was observed with any of the isotype-specific unbound antibodies.
相应治疗组的蛛网图(个体小鼠的肿瘤随时间的生长)(图42)清楚地证明了同质性强的功效,在所有剂量组中都出现了两种抗CCR8抗体的完全响应。Spider plots of the corresponding treatment groups (tumor growth of individual mice over time) (Figure 42) clearly demonstrate the efficacy with high homogeneity, with complete responses from both anti-CCR8 antibodies observed in all dose groups.
在二抗治疗后24小时,通过流式细胞术对CT26肿瘤样本进行的Treg分析显示,与同种型对照组相比,抗CCR8抗体治疗组中的Treg数量大大减少。在TPP-15285的情况下,Treg消耗明显是剂量依赖性的(图43)。Treg analysis of CT26 tumor samples by flow cytometry 24 hours after secondary antibody treatment showed a significant reduction in the number of Tregs in the anti-CCR8 antibody treatment group compared to the isotype control group. In the case of TPP-15285, Treg depletion was clearly dose-dependent (Figure 43).
表12.2.1:来自图43的相应数据。Table 12.2.1: Relevant data from Figure 43.
实施例12.3:作用模式研究Example 12.3: Study on the mode of action
实施例12.3.1:在负荷CT26肿瘤的小鼠中进行的ADCC/ADCP作用模式研究Example 12.3.1: Study on the ADCC/ADCP mechanism of action in mice burdened with CT26 tumors
与糖基化抗体相比,可在原核宿主中产生的非糖基化抗体显示出几乎相同的抗原结合亲和力、生理温度下的稳定性和体内血清持久性。然而,N-连接聚糖的缺失几乎消除了所有FcγR结合亲和力和免疫效应子功能,这些功能对于通过ADCC或ADCP清除抗体调理的靶细胞至关重要。为了为基于ADCC/ADCP的作用模式提供证据,生成了抗体的非糖基化版本作为阴性对照。Compared to glycosylated antibodies, non-glycosylated antibodies, which can be generated in prokaryotic hosts, exhibit nearly identical antigen-binding affinity, stability at physiological temperatures, and in vivo serum persistence. However, the absence of N-linked glycans virtually eliminates all FcγR binding affinity and immune effector functions, which are crucial for clearing antibody-opyrated target cells via ADCC or ADCP. To provide evidence for ADCC/ADCP-based modes of action, non-glycosylated versions of the antibodies were generated as negative controls.
TPP-18208和TPP-18209是抗CCR8替代抗体的糖基化人IgG1版本,无法通过Fc-γ受体结合效应细胞,例如NK细胞和/或巨噬细胞。这些抗体在负荷CT26肿瘤的小鼠中测试了抗肿瘤功效,并与包含相同序列(TPP-14095、TPP-14099)的相应野生型/糖基化对应物进行了比较。此外,该研究还包括抗CCR8抗体TPP-15285和TPP-15286(糖基化,mIgG2同种型)。TPP-18208 and TPP-18209 are glycosylated human IgG1 versions of anti-CCR8 alternative antibodies that cannot bind to effector cells, such as NK cells and/or macrophages, via Fc-γ receptors. These antibodies were tested for antitumor efficacy in mice burdened with CT26 tumors and compared to their corresponding wild-type/glycosylated counterparts containing the same sequences (TPP-14095, TPP-14099). Additionally, this study included the anti-CCR8 antibodies TPP-15285 and TPP-15286 (glycosylated, mIgG2 isotype).
野生型抗体显示出很强的抗肿瘤功效,而与同种型对照相比,非糖基化抗体未显示出任何功效(图44)。蜘蛛图说明了每个治疗组中个体小鼠的结果(图45)。因此,通过流式细胞术进行的离体肿瘤分析证明仅在用野生型(糖基化)抗体处理后Treg耗竭,而与相应的非结合同种型对照相比,非糖基化抗体未显示Treg耗竭(图46)。Wild-type antibodies exhibited strong antitumor efficacy, while non-glycosylated antibodies showed no efficacy compared to the isotype control (Figure 44). Spider plots illustrate the results for individual mice in each treatment group (Figure 45). Thus, in vitro tumor analysis by flow cytometry demonstrated Treg depletion only after treatment with wild-type (glycosylated) antibodies, while non-glycosylated antibodies did not show Treg depletion compared to the corresponding unbound isotype control (Figure 46).
这些结果证实了ADCC和/或ADCP是CT26肿瘤中抗CCR8抗体耗竭Treg的主要作用模式。These results confirm that ADCC and/or ADCP are the main modes of action of anti-CCR8 antibody-depleted Tregs in CT26 tumors.
实施例12.3.2:B细胞或T细胞的参与以及CD8+细胞耗竭或CD19+细胞耗竭对抗CCR8抗体抗肿瘤功效的影响Example 12.3.2: The involvement of B cells or T cells and the effect of CD8+ cell depletion or CD19+ cell depletion on the anti-tumor efficacy of CCR8 antibody.
为了测试肿瘤浸润性CD8+T细胞或CD 19+B细胞的存在与抗CCR8抗体的抗肿瘤功效的相关性,发明人使用了基因修饰的C57BL6小鼠,该小鼠在谱系特异性Cd8a+或谱系特异性Cd19+启动子的控制下表达白喉毒素受体(DTR)。注射白喉毒素(DT)后,CD8+T细胞或CD19+B细胞从小鼠血液(数据未显示)以及皮下携带的同基因MC38肿瘤中定量耗竭(表12.3.2.1)。To test the correlation between the presence of tumor-infiltrating CD8+ T cells or CD19+ B cells and the antitumor efficacy of anti-CCR8 antibodies, the inventors used genetically modified C57BL6 mice that expressed diphtheria toxin receptor (DTR) under the control of lineage-specific Cd8a+ or lineage-specific Cd19+ promoters. Following diphtheria toxin (DT) injection, CD8+ T cells or CD19+ B cells were quantitatively depleted from mouse blood (data not shown) and subcutaneously carried syngeneic MC38 tumors (Table 12.3.2.1).
正如预期的那样,CD8+T细胞的耗竭完全消除了抗CCR8治疗的抗肿瘤作用,导致肿瘤生长与同种型对照组相同(图87)。这些结果证实了本发明的抗CCR8抗体的抗肿瘤功效依赖于CD8+T细胞的存在。As expected, the depletion of CD8+ T cells completely eliminated the anti-tumor effect of anti-CCR8 therapy, resulting in tumor growth identical to that of the isotype control group (Figure 87). These results confirm that the anti-tumor efficacy of the anti-CCR8 antibody of the present invention depends on the presence of CD8+ T cells.
相反,非常令人惊讶的是,耗竭CD19+B细胞显著增加了TPP15285的功效(图88),导致T/C比率从0.35降低到0.16(T检验p值=0.032)。因此,建议将抗CCR8治疗与B细胞耗竭或B细胞耗竭剂(如抗CD19抗体或抗CD20抗体,如利妥昔单抗)相结合,以进一步改善临床癌症治疗。Conversely, quite surprisingly, depletion of CD19+ B cells significantly increased the efficacy of TPP15285 (Figure 88), resulting in a decrease in the T/C ratio from 0.35 to 0.16 (T-test p-value = 0.032). Therefore, it is recommended to combine anti-CCR8 therapy with B-cell depletion or B-cell depletion agents (such as anti-CD19 antibodies or anti-CD20 antibodies, such as rituximab) to further improve clinical cancer treatment.
表12.3.2.1:白喉毒素处理的DTR小鼠中CD8a和CD19表达的消耗。Table 12.3.2.1: Depletion of CD8a and CD19 expression in diphtheria toxin-treated DTR mice.
表12.3.2.2:评估CD19+B细胞耗竭或CD8+T细胞耗竭影响的治疗组。Table 12.3.2.2: Treatment groups assessed for the effects of CD19+ B cell depletion or CD8+ T cell depletion.
实施例12.3.3:CT26同基因肿瘤小鼠中CD8/FOXP3比率增加的时间过程Example 12.3.3: Time course of increased CD8/FOXP3 ratio in CT26 syngeneic tumor mice
为了获得对免疫细胞水平的一些机制见解,在用TPP15285或同种型对照处理的CT26同基因肿瘤小鼠中监测CD8和FOXP3的mRNA水平。直接在施用第一剂之前以及施用第一剂后12小时、24小时、36小时、48小时、72小时收获10个肿瘤用于RNA-seq分析。类似地,在施用第二、第三和第四剂量的TPP15285后24小时收获肿瘤。对所有肿瘤进行RNA-seq分析以测量鼠Foxp3、CD8a和CD8b1mRNA水平。计算平均Cd8a和Cd8b1与Fopx3比率的比率,并通过T检验计算对照组和TPP15285治疗组之间比率差异的显著性。To gain some mechanistic insights into the immune cell level, CD8 and FOXP3 mRNA levels were monitored in CT26 syngeneic tumor mice treated with TPP15285 or an isotype control. Ten tumors were harvested directly before the first dose and at 12, 24, 36, 48, and 72 hours after the first dose for RNA-seq analysis. Similarly, tumors were harvested 24 hours after the second, third, and fourth doses of TPP15285. RNA-seq analysis was performed on all tumors to measure mouse Foxp3, CD8a, and CD8b1 mRNA levels. The mean ratios of Cd8a and Cd8b1 to Fopx3 were calculated, and the significance of the difference in ratios between the control and TPP15285 treatment groups was determined using a t-test.
CD8与FOXP3mRNA的比率在同种型对照和TPP15285治疗后最早时间点之间的值在0.9和2.0左右之间变化,但随后在TPP15285组中分别在第一次给药后72小时、第二次给药后24小时和第三次给药后24小时显著增加到5.8、3.9和4.4,表明TPP15285显著耗竭了调节性T细胞。在第4次给药后24小时,比值回落至2.6。The ratio of CD8 to FOXP3 mRNA varied between approximately 0.9 and 2.0 at the earliest time point after TPP15285 treatment in the isotype control and TPP15285 groups. However, in the TPP15285 group, it significantly increased to 5.8, 3.9, and 4.4 at 72 hours after the first dose, 24 hours after the second dose, and 24 hours after the third dose, respectively, indicating that TPP15285 significantly depleted regulatory T cells. At 24 hours after the fourth dose, the ratio returned to 2.6.
表12.3.3.1:在施用TPP15285或同种型对照后不同时间点测量的mRNA水平的CD8/FOXP3比率。Table 12.3.3.1: CD8/FOXP3 ratio of mRNA levels measured at different time points after administration of TPP15285 or isotype control.
实施例12.4:CCR8抗体TPP-15285在EMT6荷瘤小鼠中的功效Example 12.4: Efficacy of CCR8 antibody TPP-15285 in EMT6 tumor-bearing mice
实施例12.4.1:CCR8抗体TPP-15285在EMT6荷瘤小鼠中的功效一一不同剂量Example 12.4.1: Efficacy of CCR8 antibody TPP-15285 in EMT6 tumor-bearing mice—Different dosages
抗CCR8替代抗体TPP-15285在EMT6荷瘤小鼠中表现出剂量依赖性功效,在10mg/kg剂量组中效果最强。对于该剂量,TPP-15285具有优于抗CTLA4抗体的功效(图47、图48)。在1mg/kg剂量组中仍然观察到很强的疗效,而0.1和0.01mg/kg剂量组几乎没有疗效。蜘蛛图在个体小鼠水平上说明了这些结果(图49)。The anti-CCR8 alternative antibody TPP-15285 demonstrated dose-dependent efficacy in EMT6 tumor-bearing mice, with the strongest effect observed at the 10 mg/kg dose. At this dose, TPP-15285 showed superior efficacy compared to the anti-CTLA4 antibody (Figures 47 and 48). Strong efficacy was also observed at the 1 mg/kg dose, while the 0.1 and 0.01 mg/kg doses showed almost no efficacy. Spider diagrams illustrate these results at the individual mouse level (Figure 49).
在第二抗体治疗后24小时通过流式细胞术对EMT6-肿瘤样品进行的Treg分析显示,与同种型对照组相比,抗CCR8抗体治疗的Treg数量大大减少。Treg耗竭明显是剂量依赖性的(图50)。如先前在文献中所述,还观察到抗CTLA4的Treg耗竭。此外,对于有效剂量组10mg/kg和1mg/kg的TPP-15285以及抗CTLA4,证明了在研究结束时取样的肿瘤中CD8+T细胞的强烈增加(图51)。表12.4.1.1和表12.4.1.2显示了免疫细胞群的进一步变化。Treg analysis of EMT6-tumor samples by flow cytometry 24 hours after the second antibody treatment showed a significant reduction in the number of Tregs compared to the isotype control group. Treg depletion was clearly dose-dependent (Figure 50). Treg depletion of anti-CTLA4 was also observed, as previously described in the literature. Furthermore, a strong increase in CD8+ T cells was demonstrated in tumors sampled at the end of the study for effective doses of TPP-15285 (10 mg/kg) and anti-CTLA4 at the end of the study (Figure 51). Tables 12.4.1.1 and 12.4.1.2 show further changes in the immune cell population.
表12.4.1.1:在用不同剂量的CCR8抗体TPP-15285第二次治疗荷瘤EMT6小鼠后24小时或在研究结束时,通过免疫细胞的FACS分析确定免疫细胞群的相对百分比。Table 12.4.1.1: The relative percentage of immune cell populations was determined by FACS analysis of immune cells 24 hours after the second treatment of tumor-bearing EMT6 mice with different doses of CCR8 antibody TPP-15285 or at the end of the study.
表12.4.1.2:在用不同剂量的CCR8抗体TPP-15285第二次治疗荷瘤EMT6小鼠后24小时或在研究结束时,通过FACS分析Tregs的相对百分比、CD8:Treg比率或CD4conv:Treg比率。Table 12.4.1.2: The relative percentage of Tregs, CD8:Treg ratio, or CD4conv:Treg ratio were analyzed by FACS 24 hours after the second treatment of tumor-bearing EMT6 mice with different doses of the CCR8 antibody TPP-15285 or at the end of the study.
实施例12.4.2:CCR8抗体TPP-15285在EMT6荷瘤小鼠中的功效——单次或多次给药Example 12.4.2: Efficacy of CCR8 antibody TPP-15285 in EMT6 tumor-bearing mice—single or multiple administrations
小鼠乳腺癌模型EMT-6与TPP-15285一起使用,以测试单次给药与多次给药的影响。测试了四种不同的治疗方案:单次治疗、两次BIW治疗、三次BIW治疗或四次BIW治疗。每组用载剂对照或0.1mg/kg、1mg/kg或5mg/kg的TPP-15285治疗。除了功效研究外,在治疗后24小时、48小时和120小时处死卫星动物进行离体表型分析。抗体施用发生在i.p.但也可以使用其他途径。The mouse breast cancer model EMT-6 was used in conjunction with TPP-15285 to test the effects of single versus multiple administrations. Four different treatment regimens were tested: single treatment, two BIW treatments, three BIW treatments, or four BIW treatments. Each group was treated with a load-controlled regimen or with TPP-15285 at 0.1 mg/kg, 1 mg/kg, or 5 mg/kg. In addition to efficacy studies, satellite animals were sacrificed at 24, 48, and 120 hours post-treatment for in vitro phenotypic analysis. Antibody administration occurred intraepithelially (i.p.), but other routes could also be used.
单次治疗、两次BIW治疗、三次BIW治疗或四次BIW治疗的功效数据显示在图85中。有趣的是,单次剂量治疗适合获得优异的治疗效果。在研究结束时,CD8+肿瘤内T细胞的频率、绝对数量和活化都有所增加,参见表12.4.2.1。然而,在研究结束时,肿瘤内Treg数量和频率或CCR8表达没有差异,参见表12.4.2.2。此外,在研究结束时或研究期间,肿瘤内NK细胞或巨噬细胞数量没有差异(数据未显示)。Efficacy data for single-dose, two-dose, three-dose, or four-dose BIW treatments are shown in Figure 85. Interestingly, single-dose treatment was most effective in achieving superior therapeutic results. At the end of the study, the frequency, absolute number, and activation of CD8+ intratumoral T cells were increased (see Table 12.4.2.1). However, there were no differences in the number and frequency of intratumoral Tregs or CCR8 expression at the end of the study (see Table 12.4.2.2). Furthermore, there were no differences in the number of intratumoral NK cells or macrophages at the end of the study or during the study (data not shown).
然而,在时间进程中,在第1次和第2次治疗后肿瘤内Tregs(CD4+CD25+Foxp3+)出现剂量依赖性减少,但在第3次和第4次治疗后不太明显,参见表12.4.2.3。这也在CCR8+Treg中观察到(数据未显示)。此外,CD8+T细胞的绝对数量随时间增加,参见表12.4.2.4。因此,与同种型对照相比,CD8与Treg的比率在第一次给药后增加,并且在第四次给药后一直保持高水平。血液样本的特征未显示在不同治疗方案和随时间推移血液中Tregs显著减少或CD8 T细胞增加(数据未显示)。此外,在血液中的NK和巨噬细胞中没有观察到变化(数据未显示)。However, over time, a dose-dependent decrease in intratumoral Tregs (CD4+CD25+Foxp3+) was observed after the first and second treatments, but less pronounced after the third and fourth treatments (see Table 12.4.2.3). This was also observed in CCR8+Tregs (data not shown). Furthermore, the absolute number of CD8+ T cells increased over time (see Table 12.4.2.4). Therefore, compared to the isotype control, the CD8/Treg ratio increased after the first dose and remained high after the fourth dose. Characterization of blood samples did not show a significant decrease in Tregs or an increase in CD8 T cells in the blood across different treatment regimens and over time (data not shown). Additionally, no changes were observed in NK cells and macrophages in the blood (data not shown).
表12.4.2.1:在研究结束时通过FACS确定的每100mg肿瘤的绝对CD8+细胞。FACS分析揭示了细胞毒性T细胞的频率、绝对数量和激活状态的增加。Table 12.4.2.1: Absolute CD8+ cells per 100 mg of tumor as determined by FACS at the end of the study. FACS analysis revealed an increase in the frequency, absolute number, and activation status of cytotoxic T cells.
表12.4.2.2:研究结束时通过FACS确定的每100mg肿瘤的绝对CD4+CD25+FoxP3+Treg细胞。Table 12.4.2.2: Absolute CD4+CD25+FoxP3+Treg cells per 100 mg tumor as determined by FACS at the end of the study.
表12.4.2.3:绝对CD4+CD25+FoxP3+Treg细胞/100mg肿瘤,如卫星动物中通过FACS测定的。Table 12.4.2.3: Absolute CD4+CD25+FoxP3+Treg cells/100mg tumor, as determined by FACS in satellite animals.
表12.4.2.4:卫星动物中通过FACS确定的每100mg肿瘤的绝对CD8+细胞。Table 12.4.2.4: Absolute CD8+ cells per 100 mg tumor as determined by FACS in satellite animals.
实施例12.5:抗CCR8抗体TPP-15285在F9荷瘤小鼠中的功效Example 12.5: Efficacy of anti-CCR8 antibody TPP-15285 in F9 tumor-bearing mice
抗CCR8替代抗体TPP-15285在F9荷瘤小鼠中表现出剂量依赖性功效,相比于抗PD-L1抗体的功效,在10mg/kg和1mg/kg剂量组中具有强效,但在0.4mg/kg剂量组中功效降低,(图52、图53)。蛛网图说明了这些在个体小鼠基础上的结果(图54)。The anti-CCR8 alternative antibody TPP-15285 showed dose-dependent efficacy in F9 tumor-bearing mice, exhibiting potent efficacy compared to the anti-PD-L1 antibody at 10 mg/kg and 1 mg/kg doses, but with decreased efficacy at 0.4 mg/kg dose (Figures 52 and 53). Spider diagrams illustrate these results on an individual mouse basis (Figure 54).
在第二抗体治疗后24小时,通过流式细胞术对F9肿瘤样品进行Treg分析,结果显示与同种型对照组相比,10mg/kg剂量抗CCR8抗体治疗组中的Treg数量大大减少。Treg耗竭明显是剂量依赖性的(图55)。抗PD-L1抗体治疗也观察到Treg耗竭。此外,对于TPP-15285的所有剂量组以及抗PD-L1抗体,都证明了肿瘤中CD8+T细胞的强烈和剂量依赖性增加(图55)。对各种免疫细胞群的进一步影响如图55、图56和表12.5.1所示。Treg analysis of F9 tumor samples by flow cytometry was performed 24 hours after the second antibody treatment. The results showed a significant reduction in the number of Tregs in the 10 mg/kg anti-CCR8 antibody treatment group compared with the isotype control group. Treg depletion was clearly dose-dependent (Figure 55). Treg depletion was also observed with anti-PD-L1 antibody treatment. Furthermore, a strong and dose-dependent increase in CD8+ T cells in the tumor was demonstrated in all dose groups of TPP-15285 and anti-PD-L1 antibody (Figure 55). Further effects on various immune cell populations are shown in Figures 55 and 56 and Table 12.5.1.
表12.5.1:抗CCR8抗体或抗PDL1抗体对免疫细胞群的影响及其在第二次治疗后24小时的比率。Table 12.5.1: Effects of anti-CCR8 or anti-PDL1 antibodies on immune cell populations and their ratios 24 hours after the second treatment.
实施例12.6:抗CCR8抗体在联合治疗中的功效Example 12.6: Efficacy of anti-CCR8 antibody in combination therapy
进行了各种实验来分析抗CCR8抗体单独或与检查点靶向抗体(如抗PD-L1、抗PD 1和抗CTLA4抗体)联合使用的功效。发现与这些检查点靶向分子的组合可提供额外的功效。此外,还评估了进一步的联合治疗,例如化疗药物如奥沙利铂、多柔比星、吉西他滨或放射治疗。表12.6.1总结了不同联合治疗的结果。如果仅在用抗CCR8抗体治疗开始后才开始用第二种治疗剂治疗,则观察到额外的益处。Various experiments were conducted to analyze the efficacy of anti-CCR8 antibodies alone or in combination with checkpoint-targeting antibodies (such as anti-PD-L1, anti-PD-1, and anti-CTLA4 antibodies). Combinations with these checkpoint-targeting molecules were found to provide additional efficacy. Furthermore, further combination therapies, such as chemotherapy drugs like oxaliplatin, doxorubicin, gemcitabine, or radiation therapy, were evaluated. Table 12.6.1 summarizes the results of different combination therapies. Additional benefit was observed if a second therapeutic agent was started only after the initiation of anti-CCR8 antibody therapy.
表12.6.1:抗CCR8抗体联合治疗和结果。Table 12.6.1: Combination therapy with anti-CCR8 antibodies and results.
这些结果表明将抗CCR8抗体治疗与其他治疗活性剂相结合的有益影响。发明人还得出结论,如果首先施用抗CCR8抗体,并且如果仅在Treg细胞初始减少(例如至少50%)后才施用进一步的治疗剂,则顺序施用治疗剂会增加额外的益处,例如如实施例12.6.5和12.6.7所示。These results demonstrate the beneficial effects of combining anti-CCR8 antibody treatment with other therapeutic agents. The inventors also concluded that sequential administration of the therapeutic agents, if the anti-CCR8 antibody is administered first and further therapeutic agents are administered only after the initial reduction of Treg cells (e.g., at least 50%), provides additional benefits, as illustrated in Examples 12.6.5 and 12.6.7.
鉴于这些实验和结果,发明人确信三重组合例如抗CCR8抗体、靶向检查点蛋白的抗体和靶向治疗剂(小分子以及抗体)的组合因为这些治疗作用模式的差异可进一步提高生存率。因此,抗CCR8抗体与检查点靶向抗体和肿瘤细胞靶向抗体或药剂的组合被建议用于肿瘤治疗。在一个优选的实施方式中,该组合是CCR8抗体、抗PD(L)-1抗体和紫杉醇的组合。Based on these experiments and results, the inventors are convinced that combinations of triplet agents, such as anti-CCR8 antibodies, checkpoint protein-targeting antibodies, and targeted therapeutic agents (small molecules and antibodies), can further improve survival rates due to the differences in these therapeutic modes of action. Therefore, combinations of anti-CCR8 antibodies with checkpoint-targeting antibodies and tumor cell-targeting antibodies or agents are proposed for cancer treatment. In a preferred embodiment, this combination is a combination of a CCR8 antibody, an anti-PD(L)-1 antibody, and paclitaxel.
实施例12.6.1:抗CCR8抗体在C38荷瘤小鼠中的功效以及与抗PD-L1抗体的联合治疗Example 12.6.1: Efficacy of anti-CCR8 antibody in C38 tumor-bearing mice and its combination therapy with anti-PD-L1 antibody
抗CCR8替代抗体TPP-14099和TPP-15285在C38荷瘤小鼠中显示出强大的功效,与抗PD-L1抗体的功效相当(图57a)。TPP-15285与3mg/kg抗PD-L1抗体的组合显示出进一步提高的疗效。两种抗体分别配制在磷酸盐缓冲盐水中,并每周两次以总共四次单独的腹膜内注射方式施用,即在同一天与同时治疗开始组合。The anti-CCR8 alternative antibodies TPP-14099 and TPP-15285 showed potent efficacy in C38 tumor-bearing mice, comparable to that of the anti-PD-L1 antibody (Figure 57a). The combination of TPP-15285 with 3 mg/kg of the anti-PD-L1 antibody showed further enhanced efficacy. Both antibodies were separately formulated in phosphate-buffered saline and administered twice weekly via a total of four separate intraperitoneal injections, i.e., on the same day as the start of treatment.
在超过94天的生存研究中监测小鼠(图57b)。值得注意的是,用抗CCR8抗体和抗PD-L1抗体组合治疗的小鼠中有8只存活了94天,用CCR8抗体TPP-15285单独治疗的10只小鼠中有4只存活了94天,而没有用单独的抗PD-L1抗体治疗的小鼠存活94天,证实了抗CCR8抗体和PD-L1抗体的协同功效。C38是一种低浸润的同基因小鼠模型,它使用C38结肠癌细胞进行肿瘤诱导。该模型通常被认为对抗PD-L1抗体治疗有应答。鉴于本文所述的可用数据,建议根据T细胞浸润和/或对PD-L1治疗的应答对患者进行分层,以提供额外的益处。Mice were monitored in a survival study exceeding 94 days (Figure 57b). Notably, 8 mice treated with a combination of anti-CCR8 and anti-PD-L1 antibodies survived for 94 days, 4 out of 10 mice treated with the CCR8 antibody TPP-15285 alone survived for 94 days, and mice not treated with anti-PD-L1 antibodies alone survived for 94 days, confirming the synergistic efficacy of the anti-CCR8 and PD-L1 antibodies. C38 is a low-invasive syngeneic mouse model that uses C38 colon cancer cells for tumor induction. This model is generally considered to respond to anti-PD-L1 antibody therapy. Given the available data described in this article, it is recommended that patients be stratified according to T-cell infiltration and/or response to PD-L1 therapy to provide additional benefit.
在第二抗体治疗后24小时,通过流式细胞术对C38肿瘤样品进行的Treg分析表明,与同种型对照组相比,抗CCR8抗体治疗组中的Treg数量大大减少(图58)。对于TPP-15285与抗PD-L1抗体的组合,观察到最强的Treg耗竭。此外,对于TPP-15285与抗PD-L1抗体的组合,观察到最高的CD8+/Treg比率。有趣的是,巨噬细胞分析显示在研究的第24天有所增加(图59)。Treg analysis of C38 tumor samples by flow cytometry 24 hours after the second antibody treatment showed a significant reduction in the number of Tregs in the anti-CCR8 antibody treatment group compared to the isotype control group (Figure 58). The strongest Treg depletion was observed with the combination of TPP-15285 and the anti-PD-L1 antibody. Furthermore, the highest CD8+/Treg ratio was observed with the combination of TPP-15285 and the anti-PD-L1 antibody. Interestingly, macrophage analysis showed an increase at day 24 of the study (Figure 59).
实施例12.6.2:抗CCR8抗体在B16F10-OVA荷瘤小鼠中的功效&与抗CTLA4抗体的联合治疗Example 12.6.2: Efficacy of anti-CCR8 antibody in B16F10-OVA tumor-bearing mice & combination therapy with anti-CTLA4 antibody
抗CCR8抗体TPP-15285(10mg/kg)在携带B16F10-OVA的小鼠中显示出与抗CTLA4抗体(10mg/kg)的功效相当的强功效(图60)。TPP-15285与抗CTLA4抗体的组合显示协同功效,与CD8+T细胞和IFNg/TNFa水平的增加相关。The anti-CCR8 antibody TPP-15285 (10 mg/kg) showed comparable efficacy to the anti-CTLA4 antibody (10 mg/kg) in mice carrying B16F10-OVA (Figure 60). The combination of TPP-15285 and the anti-CTLA4 antibody showed synergistic efficacy, which was associated with increased CD8+ T cell and IFNg/TNFα levels.
两种抗体都配制在PBS中,并在同一天与同时开始的治疗相组合,每周两次进行总共三次腹膜内注射。Both antibodies were prepared in PBS and combined with the treatment that started at the same time on the same day, administered intraperitoneally for a total of three times, twice a week.
在第二抗体治疗后24小时(第12天)通过流式细胞术对B16F10-OVA肿瘤样品进行的Treg分析表明,与同种型对照组相比,CCR8抗体治疗组中的Treg数量大大减少(表12.6.2.1)。对于TPP-15285与抗CTLA4抗体的组合,观察到最强的Treg耗竭。此外,对于TPP-15285与抗CTLA4抗体的组合,观察到最强的CD8+T细胞增加。Treg analysis of B16F10-OVA tumor samples by flow cytometry 24 hours after the second antibody treatment (day 12) showed a significant reduction in Treg numbers in the CCR8 antibody treatment group compared to the isotype control group (Table 12.6.2.1). The strongest Treg depletion was observed with the combination of TPP-15285 and anti-CTLA4 antibody. Furthermore, the strongest increase in CD8+ T cells was observed with the combination of TPP-15285 and anti-CTLA4 antibody.
在使用TPP-15285+同种型对照、抗CTLA4抗体+同种型对照或TPP-15285+抗CTLA4抗体进行第二抗体治疗后24小时,B16F10-OVA肿瘤的FACS分析表明肿瘤内Treg频率降低和CD8+T细胞的绝对数量增加。24 hours after secondary antibody treatment with TPP-15285+ isotype control, anti-CTLA4 antibody+ isotype control, or TPP-15285+ anti-CTLA4 antibody, FACS analysis of B16F10-OVA tumors showed a decrease in the frequency of intratumoral Tregs and an increase in the absolute number of CD8+ T cells.
表12.6.2.1:研究结束时通过FACS确定的肿瘤内细胞群和通过ELISA确定的IFNg。*n=5个样本的平均值。Table 12.6.2.1: Intratumoral cell populations determined by FACS and IFNg determined by ELISA at the end of the study. *n = mean of 5 samples.
实施例12.6.3:在携带EMT-6肿瘤的小鼠中使用抗PD-1抗体和抗CCR8抗体的联合治疗:协同功效Example 12.6.3: Combined therapy with anti-PD-1 and anti-CCR8 antibodies in mice carrying EMT-6 tumors: synergistic efficacy
单独使用抗鼠CCR8抗体TPP-15285(1mg/kg)、单独使用抗鼠PD-1抗体(CDRs:atezolizumab,10mg/kg)或联合使用TPP-15285(1mg/kg)和抗鼠PD-1抗体(10mg/kg)的治疗效果在EMT-6荷瘤小鼠中进行了评估。两种抗体均在PBS中配制,并在同一天与同时开始的治疗相结合,每周两次进行总共四次腹膜内注射。The therapeutic effects of TPP-15285 (1 mg/kg) alone, anti-mouse PD-1 antibody (CDRs: atezolizumab, 10 mg/kg) alone, or in combination with TPP-15285 (1 mg/kg) and anti-mouse PD-1 antibody (10 mg/kg) were evaluated in EMT-6 tumor-bearing mice. Both antibodies were prepared in PBS and administered intraperitoneally twice a week for a total of four times, in conjunction with concurrently initiated treatments, on the same day.
抗CCR8抗体TPP-15285在1mg/kg的低剂量下在携带EMT-6的小鼠中显示出较弱的功效,与10mg/kg的抗PD-1抗体的弱功效相当(图61)。1mg/kg TPP-15285与10mg/kg抗PD-1的组合显示协同功效。The anti-CCR8 antibody TPP-15285 showed weak efficacy in mice carrying EMT-6 at a low dose of 1 mg/kg, comparable to the weak efficacy of the anti-PD-1 antibody at 10 mg/kg (Figure 61). The combination of 1 mg/kg TPP-15285 and 10 mg/kg anti-PD-1 showed synergistic efficacy.
在第二抗体治疗后24小时,通过流式细胞术对EMT-6肿瘤样本进行的Treg分析显示,与同种型对照组或抗PD-1单一疗法相比,CCR8抗体治疗组中的Treg数量大大减少(图62)。Treg analysis of EMT-6 tumor samples by flow cytometry 24 hours after the second antibody treatment showed that the number of Tregs in the CCR8 antibody treatment group was significantly reduced compared with the isotype control group or anti-PD-1 monotherapy (Figure 62).
表12.6.3.1:在研究结束时通过FACS在EMT-6肿瘤中确定的肿瘤内细胞群。*n=5个样品的平均值,细胞/100mg肿瘤。Table 12.6.3.1: Intratumoral cell populations identified in EMT-6 tumors by FACS at the end of the study. *n = mean of 5 samples, cells/100 mg tumor.
实施例12.6.4:在C38荷瘤小鼠中使用抗PD-1抗体和抗CCR8抗体的联合治疗Example 12.6.4: Combined treatment with anti-PD-1 and anti-CCR8 antibodies in C38 tumor-bearing mice
单独使用抗鼠CCR8抗体TPP-15285(5mg/kg)、单独使用抗鼠PD-1抗体(aPD_1,CDR:atezolizumab,5mg/kg)或联合施用TPP_15285(5mg/kg)和抗鼠PD-1抗体(5mg/kg)的治疗功效在C38荷瘤小鼠中进行评估。两种抗体均在PBS中配制,并在同一天与同时开始的治疗相结合,每周两次进行总共四次腹膜内注射。The therapeutic efficacy of TPP-15285 (5 mg/kg) alone, anti-mouse PD-1 antibody (aPD_1, CDR: atezolizumab, 5 mg/kg) alone, or in combination with TPP_15285 (5 mg/kg) and anti-mouse PD-1 antibody (5 mg/kg) was evaluated in C38 tumor-bearing mice. Both antibodies were prepared in PBS and administered intraperitoneally twice a week for a total of four times, on the same day in conjunction with concurrently initiated treatment.
抗CCR8抗体TPP-15285在C38荷瘤小鼠中表现出很强的功效,高于以相同剂量施用的抗PD-1抗体的功效(图63a)。64天后,与抗CCR8单一疗法的9/10和抗PD1单一疗法的4/10相比,5mg/kg TPP-15285与5mg/kg抗PD-1抗体的组合显示出改善的生存功效,具有10/10的完全响应者(图63b)。The anti-CCR8 antibody TPP-15285 demonstrated potent efficacy in C38 tumor-bearing mice, exceeding that of the anti-PD-1 antibody administered at the same dose (Figure 63a). After 64 days, the combination of 5 mg/kg TPP-15285 and 5 mg/kg anti-PD-1 antibody showed improved survival efficacy with 10/10 complete responders, compared to 9/10 of those treated with anti-CCR8 monotherapy and 4/10 of those treated with anti-PD1 monotherapy (Figure 63b).
在第二抗体治疗后24小时,通过流式细胞术对C38肿瘤样品的Treg分析显示在图64、表12.6.4.1中。Treg analysis of C38 tumor samples by flow cytometry 24 hours after the second antibody treatment is shown in Figure 64 and Table 12.6.4.1.
表12.6.4.1:在第二抗体治疗后24小时,通过FACS在C38肿瘤中测定的肿瘤内细胞群。*n=5个样本的平均值,细胞/100mg肿瘤。Table 12.6.4.1: Intratumoral cell population measured by FACS in C38 tumors 24 hours after secondary antibody treatment. *n = mean of 5 samples, cells/100 mg tumor.
实施例12.6.5:抗CCR8抗体与抗PD-1抗体在MB49荷瘤小鼠中的顺序联合治疗Example 12.6.5: Sequential combination therapy of anti-CCR8 antibody and anti-PD-1 antibody in MB49 tumor-bearing mice
单独使用抗鼠CCR8抗体TPP-15285(10mg/kg)、单独使用抗鼠PD-1抗体(CDR:atezolizumab,10mg/kg)和联合使用TPP-15285(10mg/kg)和抗PD-1抗体(10mg/kg)的治疗功效在MB49荷瘤小鼠的研究中进行了评估。在这项研究中,第一剂抗PD1抗体仅在抗CCR8抗体之后施用,即在允许抗CCR8抗体对Tregs产生影响导致CD8+T细胞与Treg比率增加之后。更具体地说,在第二次抗CCR8抗体治疗后24小时开始用抗PD1抗体治疗。The therapeutic efficacy of anti-mouse CCR8 antibody TPP-15285 (10 mg/kg) alone, anti-mouse PD-1 antibody (CDR: atezolizumab, 10 mg/kg) alone, and the combination of TPP-15285 (10 mg/kg) and anti-PD-1 antibody (10 mg/kg) was evaluated in MB49 tumor-bearing mice. In this study, the first dose of anti-PD-1 antibody was administered only after the anti-CCR8 antibody, i.e., after allowing the anti-CCR8 antibody to affect Tregs, resulting in an increase in the CD8+ T cell to Treg ratio. More specifically, anti-PD-1 antibody treatment was initiated 24 hours after the second anti-CCR8 antibody treatment.
抗CCR8抗体TPP-15285在携带MB49肿瘤的小鼠中表现出很强的功效,高于抗PD1抗体(图65)。10mg/kgTPP-15285与10mg/kg抗PD-1的组合显示出进一步改善的功效。The anti-CCR8 antibody TPP-15285 showed strong efficacy in mice carrying MB49 tumors, exceeding that of the anti-PD1 antibody (Figure 65). The combination of 10 mg/kg TPP-15285 with 10 mg/kg anti-PD-1 showed further improved efficacy.
研究结束时对MB49衍生肿瘤样本的FACS分析显示,与载剂对照组或抗PD-1抗体单一疗法相比,抗CCR8抗体治疗组的CD45+细胞、CD8+细胞和NK细胞频率增加,Tregs频率降低(图66、表12.6.5.1)。At the end of the study, FACS analysis of MB49-derived tumor samples showed that, compared with the load control group or anti-PD-1 antibody monotherapy, the anti-CCR8 antibody treatment group had increased frequencies of CD45+ cells, CD8+ cells, and NK cells, and decreased frequencies of Tregs (Figure 66, Table 12.6.5.1).
MB49是一种中等浸润同基因模型,使用对免疫检查点抑制剂(ICI)疗法有响应的膀胱癌细胞。鉴于这些数据,建议对受试者进行低免疫浸润和/或对ICI治疗响应的分层,以为该联合治疗提供额外益处。MB49 is an intermediate-invasive syngeneic model using bladder cancer cells that have responded to immune checkpoint inhibitor (ICI) therapy. Based on these data, it is recommended that subjects be stratified by low immune infiltration and/or response to ICI treatment to provide additional benefit from this combination therapy.
特别是,发现在抗CCR8抗体治疗后开始联合治疗会带来益处。不受理论的束缚,发明人认为CCR8抗体对Treg的初始消耗增强了抗原呈递细胞的活性和肿瘤T细胞的启动,导致对检查点抑制剂如PD-(L)1的敏感性提高,因为Treg作为肿瘤细胞外在因素在癌症患者对检查点抑制剂的原发性和适应性耐药中发挥作用。In particular, it was found that initiating combination therapy after anti-CCR8 antibody treatment brought benefits. Unbound by theory, the inventors believe that the initial depletion of Tregs by CCR8 antibodies enhances the activity of antigen-presenting cells and the activation of tumor T cells, leading to increased sensitivity to checkpoint inhibitors such as PD-(L)1, because Tregs, as an external factor to tumor cells, play a role in the primary and adaptive resistance of cancer patients to checkpoint inhibitors.
表12.6.5.1:在研究结束时通过FACS在MB49肿瘤中确定的肿瘤内细胞群。*n=5个样本的平均值,细胞/100 mg肿瘤。Table 12.6.5.1: Intratumoral cell populations identified in MB49 tumors by FACS at the end of the study. *n = mean of 5 samples, cells/100 mg tumor.
实施例12.6.6:在具有EMT-6肿瘤的小鼠中用包含抗CCR8抗体和化学疗法的联合治疗Example 12.6.6: Combination therapy including anti-CCR8 antibody and chemotherapy in mice with EMT-6 tumors
抗CCR8抗体TPP-15285(5mg/kg,q3/4d i.p.)单独、奥沙利铂(5mg/kg,q4d i.p.)单独、多柔比星(6mg/kg,i.v.SD)单独、多烯紫杉醇(10mg/kg,q2dx5,i.v.)单独或TPP-15285与奥沙利铂、多柔比星或多烯紫杉醇的组合的治疗功效在EMT-6荷瘤小鼠中进行了评估。治疗剂在PBS中配制,联合治疗在同一天开始,同时开始治疗。The therapeutic efficacy of anti-CCR8 antibody TPP-15285 (5 mg/kg, q3/4d i.p.) alone, oxaliplatin (5 mg/kg, q4d i.p.) alone, doxorubicin (6 mg/kg, i.v. SD) alone, docetaxel (10 mg/kg, q2d x 5, i.v.) alone, or in combination with oxaliplatin, doxorubicin, or docetaxel was evaluated in EMT-6 tumor-bearing mice. The therapeutic agents were prepared in PBS, and combination therapy was initiated on the same day, with treatment starting simultaneously.
虽然抗CCR8抗体与每种化疗剂的组合提供优于使用该化疗剂的单一疗法的益处,但该组合并不优于抗CCR8单一疗法(图67)。发明人确信,顺序施用治疗剂是有益的,允许抗CCR8抗体在应用化学治疗剂以耗竭快速分裂的细胞之前有效地耗竭Tregs。While the combination of anti-CCR8 antibodies with each chemotherapeutic agent provides benefits superior to monotherapy using that chemotherapeutic agent, the combination is not superior to anti-CCR8 monotherapy (Figure 67). The inventors are convinced that sequential administration of the therapeutic agents is beneficial, allowing the anti-CCR8 antibody to effectively deplete Tregs before applying the chemotherapeutic agent to deplete rapidly dividing cells.
在研究结束时通过流式细胞术分析了肿瘤和血液中的免疫细胞群,参见表12.6.6.1和表12.6.6.2。对于联合治疗,与每种单一疗法和对照相比,肿瘤内CD8/Treg比率和血液中激活的CD8+CD25+T细胞的频率增加。At the end of the study, immune cell populations in tumors and blood were analyzed by flow cytometry, see Tables 12.6.6.1 and 12.6.6.2. For combination therapy, compared with each monotherapy and control, the intratumoral CD8/Treg ratio and the frequency of activated CD8+CD25+ T cells in the blood were increased.
此外,还分析了IFN gamma、IL10、IL12p70、IL1beta、IL2和TNFα。在单一和组合组中观察到IFNγ、IL-1b和IL-2水平升高。仅在组合组中观察到TNFα增加(数据未显示)。In addition, IFN-γ, IL-10, IL-12p70, IL-1beta, IL-2, and TNFα were analyzed. Elevated levels of IFN-γ, IL-1β, and IL-2 were observed in both the single and combined groups. An increase in TNFα was observed only in the combined group (data not shown).
表12.6.6.1:研究结束时通过FACS确定的肿瘤内细胞群。*如果没有另外说明,n=5个样本的平均值,细胞/100mg肿瘤。Table 12.6.6.1: Intratumoral cell populations determined by FACS at the end of the study. *Unless otherwise specified, n = mean of 5 samples, cells/100 mg tumor.
表12.6.6.2:研究结束时通过FACS确定的血液免疫细胞群。*n=5个样本的平均值,细胞/100μl血液。Table 12.6.6.2: Blood immune cell populations identified by FACS at the end of the study. *n = mean of 5 samples, cells/100 μl blood.
实施例12.6.7:在Lewis肺癌小鼠中用抗PD-(L)1抗体和抗CCR8抗体进行顺序联合治疗Example 12.6.7: Sequential combination therapy with anti-PD-(L)1 antibody and anti-CCR8 antibody in Lewis lung cancer mice
单独抗CCR8抗体TPP-15285(10mg/kg)、单独抗PD-1抗体(aPD-1,CDRs:atezolizumab,10mg/kg)、抗PD-L1抗体(10mg/kg)单独、单独抗CTLA4抗体、TPP-15285(10mg/kg)和抗PD-1抗体(10mg/kg)的组合,或TPP-15285(10mg/kg)和抗PD-L1抗体(10mg/kg)的组合的治疗功效在Lewis肺肿瘤携带小鼠中进行了评估(图69)。抗体在PBS中配制。对于抗CCR8抗体,在肿瘤接种后第11、14、18和22天施用给药。对于联合治疗,在第二次抗CCR8抗体剂量后24小时开始施用抗PD-(L)1抗体。在这个时间点,FACS分析显示相对于同种型对照TPP-15285单组的肿瘤内Treg消耗为60%(数据未显示)。The therapeutic efficacy of anti-CCR8 antibody TPP-15285 (10 mg/kg) alone, anti-PD-1 antibody (aPD-1, CDRs: atezolizumab, 10 mg/kg) alone, anti-PD-L1 antibody (10 mg/kg) alone, anti-CTLA4 antibody alone, a combination of TPP-15285 (10 mg/kg) and anti-PD-1 antibody (10 mg/kg), or a combination of TPP-15285 (10 mg/kg) and anti-PD-L1 antibody (10 mg/kg) was evaluated in Lewis lung tumor-carrying mice (Figure 69). Antibodies were prepared in PBS. For anti-CCR8 antibody, administration was performed on days 11, 14, 18, and 22 post-tumor inoculation. For combination therapy, anti-PD-(L)1 antibody was administered 24 hours after the second dose of anti-CCR8 antibody. At this time point, FACS analysis showed that intratumoral Treg consumption was 60% compared to the isotype control TPP-15285 single group (data not shown).
Lewis肺被用作具有抑制性肿瘤微环境的同基因模型,并且已知其对抗PD-(L)1治疗和抗CTLA4治疗没有响应。尽管在第二次治疗后24小时测量到有效的Treg耗竭,但未观察到TPP-15285的单一治疗功效。然而,在抗CCR8抗体后与抗鼠PD-1抗体的联合治疗显示出改善的疗效,这也与研究结束时CD8/Treg比率增加有关(表12.6.7.1)。Lewis lung was used as an syngeneic model of a suppressive tumor microenvironment and is known to be unresponsive to anti-PD-(L)1 and anti-CTLA4 therapy. Although effective Treg depletion was measured 24 hours after the second treatment, no monotherapy efficacy of TPP-15285 was observed. However, combination therapy with an anti-mouse PD-1 antibody following anti-CCR8 antibody therapy showed improved efficacy, which was also associated with an increased CD8/Treg ratio at the end of the study (Table 12.6.7.1).
表12.6.7.1:研究结束时通过FACS确定的肿瘤内细胞群。*n=5个样本的平均值。Table 12.6.7.1: Intratumoral cell populations identified by FACS at the end of the study. *n = mean of 5 samples.
实施例12.6.8:在携带EMT-6肿瘤的小鼠中用包含抗CCR8抗体和放疗的联合治疗Example 12.6.8: Combined treatment with anti-CCR8 antibody and radiotherapy in mice carrying EMT-6 tumors
抗CCR8抗体TPP-15285(3mg/kg)或放疗(RT,3x2Gy)单独或组合的治疗效果在EMT-6荷瘤小鼠中进行评估(图70)。联合治疗以3x 2Gy分次照射开始,然后是3mg/kg biw x 2。单独的放射治疗仅轻度延迟肿瘤生长。抗CCR8抗体和放疗的组合仅显示出轻微的疗效改善,但研究结束时Treg耗竭比每种单一疗法更明显(数据未显示)。The therapeutic effects of anti-CCR8 antibody TPP-15285 (3 mg/kg) or radiotherapy (RT, 3 x 2 Gy) alone or in combination were evaluated in EMT-6 tumor-bearing mice (Figure 70). Combination therapy began with 3 x 2 Gy fractionated irradiation, followed by 3 mg/kg biw x 2. Radiotherapy alone only slightly delayed tumor growth. The combination of anti-CCR8 antibody and radiotherapy showed only a slight improvement in efficacy, but Treg exhaustion was more pronounced at the end of the study than with either single therapy (data not shown).
实施例12.6.9:在MBT2荷瘤小鼠中用包含抗CCR8抗体和施用PD-1抗体、PD-L1抗体或紫杉醇的联合疗法Example 12.6.9: Combination therapy in MBT2 tumor-bearing mice containing anti-CCR8 antibody and administration of PD-1 antibody, PD-L1 antibody, or paclitaxel.
如表12.6.9.1所示,在MBT2同基因肿瘤荷瘤小鼠中单独或组合测试本发明的抗CCR8抗体、抗PD-1抗体、抗PD-L1抗体或紫杉醇的治疗功效。每组包括10只荷瘤小鼠,治疗在接种后第10天开始,此时肿瘤已达到约100mm3的大小。在单一治疗组中,抗CCR8显示出最强和显著的抗肿瘤作用。通过将抗PD-1抗体、抗PD-L1抗体或紫杉醇这些治疗与抗CCR8疗法相组合显著增加这些疗法的抗肿瘤作用。抗体在PBS中配制。在每两周治疗总共三周后分析T/C比率。As shown in Table 12.6.9.1, the therapeutic efficacy of the anti-CCR8 antibody, anti-PD-1 antibody, anti-PD-L1 antibody, or paclitaxel of the present invention was tested alone or in combination in MBT2 syngeneic tumor-bearing mice. Each group consisted of 10 tumor-bearing mice, and treatment began on day 10 post-inoculation, at which time the tumor had reached a size of approximately 100 mm³ . In the single-treatment group, anti-CCR8 showed the strongest and most significant antitumor effect. Combining these treatments with anti-PD-1 antibody, anti-PD-L1 antibody, or paclitaxel with anti-CCR8 therapy significantly increased the antitumor effect of these therapies. The antibodies were prepared in PBS. The T/C ratio was analyzed after three weeks of treatment, every two weeks.
表12.6.9.1:第24天治疗组和相对于同种型对照的T/C比率。Table 12.6.9.1: T/C ratios on day 24 in the treatment group and relative to the isotype control group.
表12.6.9.2:抗CCR8联合治疗后CD8 mRNA水平增加。通过对治疗周期结束后24小时获得的MBT2肿瘤进行的RNA-seq获得CD8mRNA水平。计算来自每个治疗组的10个肿瘤的平均CD8表达水平。与同种型相比,单独的抗CCR8治疗显著增加了CD8水平,而PD1、PDL1和紫杉醇没有显著影响。通过将抗CCR8治疗与其他三种治疗相结合,进一步提高了CD8水平。抗CCR8与抗PD1治疗的组合获得了超过8倍的最显著和最强的增加。Table 12.6.9.2: Increase in CD8 mRNA levels after anti-CCR8 combination therapy. CD8 mRNA levels were obtained by RNA-seq of MBT2 tumors acquired 24 hours after the end of the treatment cycle. The mean CD8 expression level from 10 tumors in each treatment group was calculated. Compared with the isotype, anti-CCR8 therapy alone significantly increased CD8 levels, while PD1, PDL1, and paclitaxel had no significant effect. Combining anti-CCR8 therapy with the other three therapies further increased CD8 levels. The combination of anti-CCR8 and anti-PD1 therapy yielded the most significant and strongest increase, exceeding 8-fold.
表12.6.9.3:第24天的肿瘤大小通过抗CCR8治疗显著减小,并通过将抗CCR8与PD1抗体(CrownVivoPremium,目录号RMP1-14)、PDL1抗体(CrownVivoPremium,目录号CVP034)或紫杉醇的组合进一步减小。与同种型对照相比,肿瘤大小的最大和最显著减少是通过抗CCR8抗体与抗PD1抗体的组合实现的。Table 12.6.9.3: Tumor size on day 24 was significantly reduced by anti-CCR8 treatment, and further reduced by combining anti-CCR8 with PD-1 antibody (CrownVivoPremium, catalog number RMP1-14), PD-L1 antibody (CrownVivoPremium, catalog number CVP034), or paclitaxel. The largest and most significant reduction in tumor size compared to the isotype control was achieved by combining anti-CCR8 antibody with anti-PD-1 antibody.
实施例12.7.1:抗PD-L1抗体应答与抗CCR8抗体应答之间的相关性Example 12.7.1: Correlation between anti-PD-L1 antibody response and anti-CCR8 antibody response
为了比较抗CCR8抗体治疗与抗PD-L 1抗体治疗的疗效,汇集了不同同基因肿瘤模型的结果,见表12.7.1.1。令人惊讶的是,对抗PD-L1抗体治疗的良好应答如通过T/C体积测量的那样,也可预测对抗CCR8抗体治疗的良好应答。PD-L 1表达是选择抗PD-L 1治疗应答者的已知预测因子。根据这些观察结果,发明人假设PD-L 1表达可能同样适用于对受试者进行分层,以便识别最有可能从抗CCR8抗体治疗中获益的受试者。可以通过将PD-L 1表达水平与肿瘤体积相关联来追溯验证这一假设。To compare the efficacy of anti-CCR8 antibody therapy with anti-PD-L1 antibody therapy, results from different syngeneic tumor models were compiled, as shown in Table 12.7.1.1. Surprisingly, a good response to anti-PD-L1 antibody therapy, as measured by T/C volume, also predicted a good response to anti-CCR8 antibody therapy. PD-L1 expression is a known predictor of response to anti-PD-L1 therapy. Based on these observations, the inventors hypothesized that PD-L1 expression might also be applicable for stratifying subjects to identify those most likely to benefit from anti-CCR8 antibody therapy. This hypothesis can be retrospectively verified by correlating PD-L1 expression levels with tumor volume.
表12.7.1.1不同同基因模型对抗PD-L1抗体与抗CCR8抗体的应答比较。Table 12.7.1.1 Comparison of responses to antiPD-L1 antibody and anti-CCR8 antibody in different syngeneic models.
实施例12.7.2:用于分层或疾病控制的抗肿瘤响应与mRNA生物标志物之间的相关性Example 12.7.2: Correlation between antitumor responses and mRNA biomarkers for stratification or disease control
早期未治疗肿瘤(大小为100-200mm3,每个模型N=10)、较大的未治疗肿瘤(500和1000mm3)或研究结束时的平均基因表达(RNA-seq)与使用TPP-14099或TPP-15285治疗的21只同基因小鼠模型的T/C比率相关,如本文别处所述。Early untreated tumors (100–200 mm³ , N=10 per model), larger untreated tumors (500 and 1000 mm³ ), or mean gene expression (RNA-seq) at the end of the study were associated with the T/C ratio in 21 syngeneic mouse models treated with TPP-14099 or TPP-15285, as described elsewhere in this article.
发现顶级相关基因显著富含T细胞和炎症标志物(皮尔逊相关值),参见表12.7.2.1。炎症标志物IFNg和IFNg应答基因(例如Gbp3/4/5/8/9、Cxcl9、Acod1)、PDL1(CD276)、C1补体因子、T细胞基因如Klra3/5和Trav,以及Treg标志物CD25(IL2RA)、FOXP3和CTLA4是与与应答最相关的基因。Top-ranking related genes were found to be significantly enriched in T cell and inflammatory markers (Pearson correlation values), see Table 12.7.2.1. Inflammatory markers IFNg and IFNg response genes (e.g., Gbp3/4/5/8/9, Cxcl9, Acod1), PDL1 (CD276), C1 complement factor, T cell genes such as Klra3/5 and Trav, and Treg markers CD25 (IL2RA), FOXP3, and CTLA4 were the genes most associated with the response.
表12.7.2.2显示了早期未治疗肿瘤的应答细胞系(T/C<0.6)与非应答细胞系(T/C>0.6)的表达倍数变化。列出了应答者和非应答者之间具有最大表达倍数变化的100个基因。IFNg和IFNg应答基因(例如Gbp2/3/4/8/10/11、Cxc19/11、Ubd)、细胞毒性T细胞标志物(例如颗粒酶、Prf1)以及肥大细胞标志物(Tpsab1、Cma1、Tpsb2)和C1补体因子是最能预测应答的基因。Table 12.7.2.2 shows the fold change in expression between responding cell lines (T/C < 0.6) and non-responding cell lines (T/C > 0.6) in early-stage untreated tumors. The 100 genes with the largest fold change in expression between responders and non-responders are listed. IFNg and IFNg response genes (e.g., Gbp2/3/4/8/10/11, Cxc19/11, Ubd), cytotoxic T cell markers (e.g., granzyme, Prf1), mast cell markers (Tpsab1, Cma1, Tpsb2), and C1 complement factor are the most predictive genes for response.
表12.7.2.3显示了对于较大的未治疗肿瘤(500和1000mm3),应答细胞系(T/C<0.6)与非应答细胞系(T/C>0.6)的表达倍数变化。Table 12.7.2.3 shows the fold change in expression between responsive cell lines (T/C < 0.6) and non-responsive cell lines (T/C > 0.6) for larger untreated tumors (500 and 1000 mm3 ).
表12.7.2.1、12.7.2.2和12.7.2.3中列出了候选生物标志物。因此,可以预期具有这些基因的人对应基因或这些基因的人对应基因的组合或特征的高表达的患者对临床中的抗CCR8治疗有响应。此外,这些标志物或它们的组合也可用于监测治疗成功。源自斜体/粗体基因的生物标志物是特别优选的。Candidate biomarkers are listed in Tables 12.7.2.1, 12.7.2.2, and 12.7.2.3. Therefore, patients with high expression of the human corresponding genes of these genes, or combinations thereof, or traits can be expected to respond to anti-CCR8 therapy in clinical settings. Furthermore, these biomarkers, or combinations thereof, can also be used to monitor treatment success. Biomarkers derived from italicized/bold genes are particularly preferred.
表12.7.2.1与用本发明的抗CCR8抗体实现的抗肿瘤响应相关的合适的生物标志物。这些生物标志物被发现在早期未治疗的肿瘤中上调,并与治疗响应相关。源自斜体/粗体的基因的生物标志物是特别优选的。列出了表达和T/C比率之间具有最大负相关系数(显示r值)的100个基因。Table 12.7.2.1 lists suitable biomarkers associated with the antitumor response achieved using the anti-CCR8 antibody of the present invention. These biomarkers have been found to be upregulated in early-stage untreated tumors and correlated with treatment response. Biomarkers derived from italicized/bold genes are particularly preferred. One hundred genes with the largest negative correlation coefficient (r value) between expression and T/C ratio are listed.
表12.7.2.2与用本发明的抗CCR8抗体实现的抗肿瘤应答相关的合适的生物标志物。应答细胞系(T/C<0.6)与非应答细胞系(T/C>0.6)的表达倍数变化。发现最相关的(pearson)基因显著富含T细胞和炎症标志物。Table 12.7.2.2 Suitable biomarkers associated with the antitumor response achieved using the anti-CCR8 antibody of the present invention. Fold-change in expression between responding cell lines (T/C < 0.6) and non-responding cell lines (T/C > 0.6). The most relevant (pearson) gene was found to be significantly enriched in T cells and inflammatory markers.
表12.7.2.3基于大的未治疗肿瘤(500mm3和1000mm3)的应答者和无应答者之间具有最大倍数变化的基因的合适生物标志物。应答者模型中颗粒酶和其他免疫细胞标志物的表达高于无应答者模型。特别优选源自斜体/粗体基因的生物标志物。Table 12.7.2.3 Suitable biomarkers for genes showing the greatest fold change between responders and non-responders in large untreated tumors (500 mm³ and 1000 mm³ ). Granase and other immune cell marker expression was higher in responder models than in non-responder models. Biomarkers derived from italicized/bold genes are particularly preferred.
实施例12.8:在施用抗CCR8抗体后同基因肿瘤模型中mRNA表达的改变Example 12.8: Changes in mRNA expression in a homogeneous tumor model after administration of anti-CCR8 antibody
对于每个同基因肿瘤模型,10只用抗CCR8抗体TPP-14099处理的小鼠和10只用同种型对照处理的小鼠在最终处理后24小时处死。将肿瘤切成小块并浸入4℃的RNAlater中。根据Illumina的Hi-seq方案提取Poly-A mRNA并生成cDNA文库,用于后续的RNA测序。样本测序深度约为4000万150bp长配对末端读数/样本。For each syngeneic tumor model, 10 mice treated with the anti-CCR8 antibody TPP-14099 and 10 mice treated with an isotype control were sacrificed 24 hours after final treatment. Tumors were cut into small pieces and immersed in RNAlater at 4°C. Poly-A mRNA was extracted according to Illumina's Hi-seq protocol to generate cDNA libraries for subsequent RNA sequencing. The sequencing depth was approximately 40 million 150 bp paired-end reads per sample.
图63至73显示了用同种型对照(TPP-9809)或抗CCR8抗体(TPP-14099)处理对不同同基因肿瘤模型中不同免疫细胞标志物的mRNA表达水平的影响。治疗增加了炎症标志物lfng、巨噬细胞标志物Ms4a7、Acod1和Mrc1、细胞毒性T细胞标志物Cd8a和Cd8b 1、自然杀伤(NK)细胞标志物Ncrl、泛T细胞标志物Cd3e/d/g和B细胞标志物Cd1 9和Cd22。Figures 63 to 73 show the effects of treatment with an isotype control (TPP-9809) or anti-CCR8 antibody (TPP-14099) on the mRNA expression levels of different immune cell markers in different syngeneic tumor models. Treatment increased the expression of inflammatory markers lfng, macrophage markers Ms4a7, Acod1, and Mrc1, cytotoxic T cell markers Cd8a and Cd8b1, natural killer (NK) cell marker Ncrl, pan-T cell marker Cd3e/d/g, and B cell markers Cd19 and Cd22.
值得注意的是,发明人在CT26、MBT2和H22肿瘤模型中观察到LTta/b以及Cxcr5及其配体Cxcl13的显著诱导,以及在其他几种模型这些基因包括RM1、Hepa1-6和4T1的总体上调。不受理论的束缚,抗CCR8抗体TPP-14099或TPP-15285对三级淋巴样结构的诱导可能有助于由这些抗体引发的抗肿瘤响应。Notably, the inventors observed significant induction of LTta/b and Cxcr5 and its ligand Cxcl13 in the CT26, MBT2, and H22 tumor models, as well as overall upregulation of these genes, including RM1, Hepa1-6, and 4T1, in several other models. Unbound by theory, the induction of tertiary lymphoid structures by the anti-CCR8 antibodies TPP-14099 or TPP-15285 may contribute to the antitumor response induced by these antibodies.
表12.8.1:T细胞标志物、检查点蛋白、Treg标志物、NK细胞标志物、巨噬细胞标志物、B细胞标志物和干扰素γ与抗CCR8抗体治疗响应的反相关性。Table 12.8.1: Inverse correlation between T cell markers, checkpoint proteins, Treg markers, NK cell markers, macrophage markers, B cell markers, and interferon-γ with response to anti-CCR8 antibody therapy.
实施例13:包含抗CCR8抗体的靶向钍缀合物(TTC)的制备Example 13: Preparation of a targeted thorium conjugate (TTC) containing an anti-CCR8 antibody
WO2016096843的全部公开内容通过引用并入本文,特别是关于如本实施例中所述的缀合物的生产。The entire contents of WO2016096843 are incorporated herein by reference, particularly relating to the production of conjugates as described in this embodiment.
3,2-羟基吡啶酮(3,2-HOPO)螯合剂或任何其他合适的螯合剂与抗体TPP-23411、TPP-21360或描述的任何其他抗CCR8抗体的缀合可如先前在专利申请WO2016096843中所述进行。简而言之,为了激活螯合剂,将3,2-HOPO螯合剂(溶解在DMA,与0.1M MES缓冲液pH5.4以1:1的比率)、NHS和EDC(均溶解在0.1M MES缓冲液pH 5.4)以1/1/3的比率混合。为了与抗体缀合,可以将摩尔比为7.5/7.5/22.5/1(螯合剂/NHS/EDC/mAb)的活化螯合剂与mAb结合。20-60分钟后,用12%v/v0.3M柠檬酸将pH值调节至5.5以淬灭反应。蛋白质浓度通过HPLC确定,对280nm吸光度处的峰面积进行积分。然后通过切向流过滤(TFF)在恒定体积下将溶液缓冲交换成30mM檬酸盐、50mg/mlx M蔗糖、2mM EDTA、0.5mg/ml pABA、pH 5.5。在渗滤结束时,将溶液排放到配制容器中。该产品由TFF缓冲液(30mM柠檬酸盐、x 50mg/ml M蔗糖、2mMEDTA、0.5mg/ml pABA,pH 5.5)和7%w/v聚山梨酯80配制而成,以获得2.5mg/ml的相应CCR8抗体-螯合剂缀合物(CCR8-ACC)。CCR8-ACC可以通过0.2μm过滤器过滤到无菌小瓶中。The conjugation of 3,2-hydroxypyridinone (3,2-HOPO) chelating agent or any other suitable chelating agent with antibody TPP-23411, TPP-21360, or any other described anti-CCR8 antibody may be performed as previously described in patent application WO2016096843. Briefly, to activate the chelating agent, 3,2-HOPO chelating agent (dissolved in DMA, at a 1:1 ratio with 0.1M MES buffer pH 5.4), NHS, and EDC (both dissolved in 0.1M MES buffer pH 5.4) are mixed in a 1/1/3 ratio. For conjugation with the antibody, the activated chelating agent can be bound to the mAb at a molar ratio of 7.5/7.5/22.5/1 (chelating agent/NHS/EDC/mAb). After 20–60 minutes, the pH is adjusted to 5.5 with 12% v/v 0.3M citric acid to quench the reaction. Protein concentration was determined by HPLC, with integration of the peak area at 280 nm absorbance. The solution was then buffered at a constant volume using tangential flow filtration (TFF) to prepare a solution containing 30 mM citrate, 50 mg/ml x M sucrose, 2 mM EDTA, 0.5 mg/ml pABA, and pH 5.5. At the end of percolation, the solution was drained into a preparation container. The product was prepared from TFF buffer (30 mM citrate, x 50 mg/ml M sucrose, 2 mM EDTA, 0.5 mg/ml pABA, pH 5.5) and 7% w/v polysorbate 80 to obtain a corresponding CCR8 antibody-chelating agent conjugate (CCR8-ACC) at 2.5 mg/ml. CCR8-ACC could be filtered through a 0.2 μm filter into sterile vials.
如WO2016096843中所述,CCR8-ACC用钍227进行了放射性标记。简言之,将5μlCCR8-ACC与32μl钍227(活性为3.875MBq/ml)和13μl柠檬酸盐缓冲液混合,产生CCR8靶向钍227缀合物(CCR8-TTC),具体活性为10kBq/微克。样品可在室温下孵育60分钟,以便将钍227稳定地标记到3,2-HOPO螯合剂中。样品的等分试样可以通过即时薄层色谱法(iTLC)进行分析。As described in WO2016096843, CCR8-ACC is radiolabeled with thorium-227. In short, 5 μl of CCR8-ACC is mixed with 32 μl of thorium-227 (activity 3.875 MBq/ml) and 13 μl of citrate buffer to generate a CCR8-targeted thorium-227 conjugate (CCR8-TTC) with an activity of 10 kBq/µg. The sample can be incubated at room temperature for 60 minutes to allow for stable labeling of thorium-227 to the 3,2-HOPO chelating agent. Aliquots of the sample can be analyzed by instantaneous thin-layer chromatography (iTLC).
抗体序列antibody sequence
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