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HK1213320B - Methods and compositions for diagnosis and prognosis of renal injury and renal failure - Google Patents

Methods and compositions for diagnosis and prognosis of renal injury and renal failure Download PDF

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Publication number
HK1213320B
HK1213320B HK16101184.6A HK16101184A HK1213320B HK 1213320 B HK1213320 B HK 1213320B HK 16101184 A HK16101184 A HK 16101184A HK 1213320 B HK1213320 B HK 1213320B
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Hong Kong
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renal
subject
group
concentration
measured concentration
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HK16101184.6A
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Chinese (zh)
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HK1213320A1 (en
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J.安德贝里
J.格雷
P.麦克弗森
K.中村
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阿斯图特医药公司
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Publication of HK1213320A1 publication Critical patent/HK1213320A1/en
Publication of HK1213320B publication Critical patent/HK1213320B/en

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Abstract

The present invention relates to methods and compositions for monitoring, diagnosis, prognosis, and determination of treatment regimens in subjects suffering from or suspected of having a renal injury. In particular, the invention relates to using assays that detect one or more markers selected from the group consisting of soluble p-selectin, protein NOV homolog, soluble epidermal growth factor receptor, netrin-4, haptoglobin, heat shock protein beta-1, alpha- 1 -antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, active caspase-3, and soluble platelet endothelial cell adhesion molecule as diagnostic and prognostic biomarkers in renal injuries.

Description

Methods and compositions for diagnosis and prognosis of renal injury and renal failure
The present application is a divisional application of a chinese national phase application having an application number of 200980140805.3 after entering the chinese national phase of PCT application having an international application number of PCT/US2009/055449 filed as "aspettem pharmaceutical company", entitled "method and composition for diagnosing and prognosing renal injury and renal failure.
The present invention claims priority of U.S. provisional patent application No. 61/092,733 filed on 28/8/2008, priority of U.S. provisional patent application No. 61/092,905 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/092,912 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/092,926 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/093,154 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/093,247 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/093,249 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/093,262 filed on 29/8/2008, priority of U.S. provisional patent application No. 61/093,263 filed on 29/8/29/2008, priority of, Priority of U.S. provisional patent application No. 61/093,264 filed on day 8/29 of 2008, priority of U.S. provisional patent application No. 61/093,266 filed on day 8/29 of 2008, priority of U.S. provisional patent application No. 61/093,244 filed on day 8/29 of 2008, priority of U.S. provisional patent application No. 61/093,272 filed on day 8/29 of 2008, the entire contents of each of the aforementioned U.S. patent applications, including all tables, figures, and claims, are hereby incorporated by reference.
Background
The background of the invention discussed below is for the purpose of assisting the reader in understanding the invention only and is not admitted to be a description of or constitute prior art to the present invention.
The kidneys are responsible for the drainage of water and solutes from the body. Renal functions include maintaining acid-base balance, regulating electrolyte concentration, controlling blood volume, and regulating blood pressure. Thus, loss of renal function due to injury and/or disease results in a significant amount of morbidity and mortality. A detailed discussion of renal injury is provided in Harrison's Principles of Internalmedicine,17th Ed., McGraw Hill, New York, pp 1741-1830, the entire contents of which are incorporated herein by reference. The renal disease and/or renal injury may be acute or chronic. Acute and chronic kidney diseases are described below (Current Medical Diagnosis & Treatment 2008,47th Ed, McGraw Hill, New York, pp 785-: "acute renal failure is a deterioration in renal function that lasts from several hours to several days, resulting in the retention of nitrogenous waste products (e.g., urea nitrogen) and creatinine in the blood. These retained substances are called azotemia. Chronic renal failure (chronic kidney disease) is caused by abnormal loss of renal function that lasts for months to years.
Acute renal failure (ARF, also known as acute kidney injury, or AKI) is a sudden (typically detected within about 48 hours to 1 week) decrease in glomerular filtration. This loss of filtration capacity results in retention of nitrogenous (urea and creatinine) waste products and non-nitrogenous waste products normally excreted by the kidneys, a decrease in urine output, or both. ARF is reported to be associated with admission rates of about 5%, cardiopulmonary bypass surgery of 4-15% and intensive care admission rates as high as 30%. ARF can be classified as prerenal, intrinsic renal, or postrenal in causal relationship. Intrarenal diseases can be further classified into glomerular abnormalities, tubular abnormalities, interstitial abnormalities, and vascular abnormalities. The major causes of ARF are described in the following table, which is available from Merck Manual,17th ed., chapter 222 and incorporated herein by reference in its entirety.
In the case of ischemic ARF, the etiology of the disease can be divided into four stages. During the initial phase, which lasts from several hours to several days, the decrease in renal perfusion evolves into injury. Glomerular ultrafiltration is reduced, fluid filtration is reduced due to debris in the tubules, and filtrate rewet through the damaged epithelium occurs. Renal injury can be mediated at this stage by reperfusion of the kidney. The initiation phase is followed by an extension phase characterized by continued ischemic injury and inflammation, and may involve endothelial injury and vascular congestion. During the maintenance phase, which lasts for 1 to 2 weeks, renal cell injury occurs and glomerular filtration and urine output reach a minimum. This is followed by a recovery phase in which the renal epithelial cells are repaired and GFR gradually recovers. Despite this, the survival rate of subjects with ARF is only about 60%.
Acute kidney injury caused by radiocontrast agents (also known as contrast agents) and other nephrotoxins such as cyclosporine, antibiotics including aminoglycosides, and anticancer drugs such as cisplatin, appears to last from several days to about a week. Contrast-induced nephropathy (CIN, AKI induced by radiocontrast agents) is believed to be caused by intrarenal vasoconstriction and by the production of reactive oxygen species that are directly toxic to renal tubular epithelial cells. CIN typically appears as an acute (onset within 24-48 hours) but increases reversibly (peak 3 to 5 days, breakdown within a week) in blood urea nitrogen and serum creatinine.
A commonly reported criterion for determining and detecting AKI is a sudden (typically within about 2-7 days or during hospitalization) increase in serum creatinine. Although the use of increases in serum creatinine to determine and detect AKI is an established approach, the extent of serum creatinine increase and the time of measurement to determine AKI vary significantly in publications. Traditionally, a relatively large increase in serum creatinine (e.g., 100%, 200%, at least 100%) relative to a 2mg/dL value was used to determine AKI. However, recent trends have tended to use smaller serum creatinine increases to determine AKI. The relationship between serum creatinine, AKI and associated health risks is reviewed in Praught and Shlipak, Curr Opin Nephrol Hypertens 14: 265. RTH. -. 270,2005 and Chertow et al, J Am Soc Nephrol 16: 3365. RTH. -. 3370,2005, the entire contents of which are incorporated herein by reference. As described in these publications, acute worsening renal function (AKI) is known to be associated with a very small increase in serum creatinine and an increased risk of death and other adverse outcomes. These increases may be determined as relative (percent) values or nominal values. It has been reported that a relative increase in serum creatinine of as little as 20% relative to the pre-injury value is indicative of acute renal function deterioration (AKI) and increased health risk, but more commonly the value determining AKI and increased health risk is a relative increase of at least 25%. Nominal increases of only 0.3mg/dL, as little as 0.2mg/dL or even 0.1mg/dL have been reported to indicate an increased risk of renal function deterioration and death. Different periods of serum creatinine rise to these thresholds have been used to determine AKI, e.g., 2 days, 3 days, 7 days or variable periods defined as the time of patient admission or at intensive care. These studies indicate that there is no specific threshold (or period of time) for serum creatinine rise for worsening renal function or AKI, but rather a continuous increase in risk with an increase in the degree of serum creatinine rise.
One study (Lassnigg et all, J Am Soc Nephrol 15:1597-1605,2004, incorporated herein by reference) investigated the increase and decrease in serum creatinine. Patients with mild decreases in serum creatinine-0.1 to-0.3 mg/dL after cardiac surgery have the lowest mortality rates. Patients with a greater decline in serum creatinine (greater than or equal to-0.4 mg/dL) or any increase in serum creatinine had greater mortality. These findings led the authors to conclude that even very minor changes in renal function (detected by small creatinine changes within 48 hours of surgery) severely affected the patient's outcome. Efforts were made to achieve a unified classification system in using serum creatinine to determine AKI in clinical trials and clinical practice, Bellomo et al, Crit care.8(4): R204-12,2004, incorporated herein by reference, proposing the following classifications to classify AKI patients:
"hazardous": serum creatinine increased 1.5 fold relative to baseline, or urine volume less than 0.5ml/kg body weight/hour for six hours;
"Damage": serum creatinine increased 2-fold relative to baseline, or urine volume less than 0.5 ml/kg/hr for 12 hours;
"exhaustion": a 3-fold increase in serum creatinine over baseline, or creatinine >355 μmol/l (and an increase greater than 44) or urine output of less than 0.3ml/kg/hr for 24 hours or anuria for at least 12 hours;
and includes two clinical outcomes
"loss": there is a continuing need for renal replacement therapy for more than four weeks.
"ESRD": late stage of kidney disease-dialysis is required for more than 3 months.
These criteria became RIFLE criteria, which provided a useful clinical tool to classify renal conditions. The RIFLE standard provides a uniform definition of AKI, which has been validated in various studies, as discussed in Kellum, Crit.Care Med.36: S141-45,2008 and Ricci et al, Kidney Int.73,538-546,2008 (each incorporated herein by reference).
Recently, Mehta et al, crit.Care 11: R31(doi:10.1186.cc5713),2007 (incorporated herein by reference) proposed the following similar classifications for AKI patients, which have improved RIFLE:
"stage I": an increase in serum creatinine of greater than or equal to 0.3mg/dL (≧ 26.4 μmol/L) or an increase of greater than or equal to 150% (1.5-fold) relative to baseline or a urine output of less than 0.5 mL/kg/hr for greater than 6 hours;
"stage II": serum creatinine increased greater than 200% (2-fold) or urine output less than 0.5 mL/kg/hr for greater than 12 hours relative to baseline;
"stage III": serum creatinine increased greater than 300% (3 fold) relative to baseline or serum creatinine greater than or equal to 354 μmol/L with an acute increase of at least 44 μmol/L or urine output of less than 0.3mL/kg/hr for 24 hours or anuria for 12 hours.
The CIN co-working group (McCollough et al, Rev Cardiovasc Med.2006; 7(4):177- & 197, incorporated herein by reference) determined contrast-induced nephropathy (one of the AKIs) using a 25% increase in serum creatinine. Although different groups proposed slightly different criteria for serum creatinine to detect AKI, it is common that small changes in serum creatinine (e.g., 0.3mg/dL or 25%) are sufficient to detect AKI (worsening renal function) and that the degree of change in serum creatinine is an indicator of AKI severity and risk of death,
although continuous measurements of serum creatinine over several days are an acceptable method for detecting and diagnosing AKI and are considered one of the most important tools for assessing AKI patients, serum creatinine is generally considered to have several limitations in diagnosing, evaluating, and monitoring AKI patients. The period of time for serum creatinine to rise to a value considered diagnostic for AKI (0.3 mg/dL or 25% rise) may be 48 hours or more, depending on the definition used. Because cell damage can occur in AKI for a period of several hours, measuring the rise in serum creatinine at 48 hours or more can be a later indicator of damage and, therefore, dependence on serum creatinine can delay diagnosis of AKI. Furthermore, serum creatinine is not a good indicator of the exact renal status, and treatment requires an indicator of the most severe stage of AKI when renal function is rapidly changing. Some patients with AKI will recover completely, some will require dialysis (short or long term) and some will have other adverse consequences including death, major adverse cardiac events and chronic kidney disease. Because serum creatinine is a marker of filtration rate, the cause of AKI (prerenal, intrarenal, postrenal obstruction, atheroembolic, etc.) or the type or location of intrarenal disease (e.g., renal tubules, glomeruli, or renal space) cannot be distinguished. Similarly, urine output is defined, which is known to be critical for the management and treatment of patients with AKI.
These limitations underscore the need for better methods of detecting and assessing AKI, particularly at the early and subclinical stages, as well as at the late stages where renal recovery and repair can occur. Moreover, there is a need for better identification of patients at risk for AKI.
Summary of The Invention
As described herein, measurement of one or more markers selected from the group consisting of soluble p-selectin, a protein homologous to NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 (and most preferably active caspase-3), and soluble platelet endothelial cell adhesion molecule (collectively referred to herein as "kidney injury markers" and individually as "kidney injury markers") can be used to diagnose, prognose, risk stratification, staging, monitor, classify, and determine a further diagnostic and therapeutic regimen for a subject suffering from an injury to renal function, reduced renal function, and/or acute renal failure (also referred to as acute renal injury).
These kidney injury markers can be used alone or in combination, including a plurality of kidney injury markers, for risk stratification (i.e., identifying an injury to renal function, a gradual decrease in renal function, a future progression to ARF, a future improvement in renal function, etc.) of a subject at risk, diagnosing an existing disease (i.e., identifying a subject with an injury to renal function, identifying a subject with a gradual decrease in renal function, a subject with a progression to ARF, etc.), for monitoring deterioration or improvement in renal function, for predicting a future medical outcome, such as an improvement or deterioration in renal function, a decreased or increased risk of death, a decreased or increased risk of a subject requiring renal replacement therapy (i.e., hemodialysis, peritoneal dialysis, hemofiltration, and/or kidney transplantation), a decreased or increased risk of a subject recovering from an injury to renal function, a decreased or increased risk of a subject recovering from ARF, etc.), A reduction or increase in the risk of the subject developing end-stage renal disease, a reduction or increase in the risk of the subject developing chronic renal failure, a reduction or increase in the risk of the subject having a rejection of transplanted kidneys, and the like.
In a first aspect, the present invention relates to methods for assessing the status of a kidney in a subject comprising performing an assay configured to detect one or more kidney injury markers of the present invention in a sample of bodily fluid obtained from the subject, then correlating the results of the assay, e.g., measured concentrations of one or more markers selected from the group consisting of soluble p-selectin, a protein homologous to NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 (and most preferably active caspase-3) and soluble platelet endothelial adhesion molecule, to the status of the kidney.
In some embodiments, the methods of assessing renal status described herein are risk stratification methods of a subject, i.e., assigning one or more future changes in renal status, if any, to the subject. In some embodiments, the analysis results are correlated with these future changes. The following are preferred embodiments of risk stratification.
In preferred risk stratification embodiments, the methods comprise determining the risk of a future injury to renal function in the subject, and correlating the results of the analysis with a likely injury to renal function. For example, each measured concentration may be compared to a threshold value. For a "positive going" kidney injury marker, an increased likelihood of a future injury to renal function corresponds to a subject having a measured concentration greater than a threshold relative to a likelihood of a corresponding measured concentration being less than the threshold. For a "negative going" kidney injury marker, an increased likelihood that an injury to renal function will result corresponds to a patient having a measured concentration less than a threshold relative to a likelihood that the corresponding measured concentration is greater than the threshold.
In other preferred risk stratification embodiments, the methods comprise determining the risk of future reduced renal function in the subject and correlating the analytical structure with the likelihood of such reduced renal function. For example, each measured concentration may be compared to a threshold value. For a "positive going" kidney injury marker, an increased likelihood of future reduced renal function corresponds to a subject having a measured concentration above a threshold relative to a likelihood of a corresponding measured concentration below the threshold. For a "negative going" kidney injury marker, an increased likelihood of future reduced renal function corresponds to a subject having a measured concentration below a threshold relative to a likelihood that the corresponding measured concentration is below the threshold.
In other preferred risk stratification embodiments, the methods comprise determining the likelihood of a future improvement in renal function in the subject, and correlating the results of the analysis with the likelihood of such improvement in renal function. For example, each measured concentration may be compared to a threshold value. For a "positive going" kidney injury marker, an increased likelihood of future improvement in renal function corresponds to a subject having a measured concentration below a threshold relative to a likelihood that the corresponding measured concentration is above the threshold. For a "negative going" kidney injury marker, an increased likelihood of future improvement in renal function corresponds to a subject having a measured concentration above a threshold relative to a likelihood that the corresponding measured concentration is below the threshold.
In other preferred risk stratification embodiments, the methods comprise determining the risk of the subject developing ARF and correlating the outcome with the likelihood of developing ARF. For example, each test concentration may be compared to a threshold value. For a "positive going" kidney injury marker, an increased likelihood of progression to ARF corresponds to a subject with a measured concentration above a threshold relative to a likelihood that the corresponding measured concentration is below the threshold. For a "negative going" kidney injury marker, an increased likelihood of developing ARF corresponds to a subject having a measured concentration below a threshold relative to a likelihood that the measured concentration is above the threshold.
In other preferred risk stratification embodiments, the methods comprise determining the risk of outcome of the subject and correlating the outcome of the analysis with the likelihood of occurrence of a clinical outcome associated with the renal injury from which the subject is suffering. For example, each measured concentration may be compared to a threshold value. For a "positive going" kidney injury marker, an increased likelihood of one or more of the following outcomes, relative to the likelihood of the corresponding measured concentration being below the threshold, corresponds to a subject whose measured concentration is above the threshold: acute kidney injury, progression to a worsening stage of AKI, death, need for renal replacement therapy, need for withdrawal of nephrotoxins, end stage renal disease, heart failure, stroke, myocardial infarction, progression to chronic kidney disease, and the like. For a "negative going" kidney injury marker, an increased likelihood of one or more of the following results is assigned to the subject for a measured concentration below a threshold relative to the likelihood assigned for a measured concentration above the threshold: acute kidney injury, progression to a worsening stage of AKI, death, need for renal replacement therapy, need for withdrawal of nephrotoxins, end stage renal disease, heart failure, stroke, myocardial infarction, progression to chronic kidney disease, and the like.
In these risk stratification embodiments, the corresponding likelihood or risk is preferably a more or less relevant event occurring within 180 days of obtaining a body fluid sample from a subject. In particularly preferred embodiments, the likelihood or risk addressed is associated with a relevant event occurring within a relatively short period of time, e.g., 18 months, 120 days, 90 days, 60 days, 45 days, 30 days, 21 days, 14 days, 7 days, 5 ethylamine, 96 hours, 72 hours, 48 hours, 36 hours, 24 hours, 12 hours or less. The risk of obtaining a body fluid sample from a subject at 0 hour corresponds to the current diagnosis.
In a preferred risk stratification embodiment, the subject is selected for risk stratification based on one or more known prerenal, intrinsic renal, or postrenal risk factors that are pre-existing in the subject. For example, subjects undergoing or having undergone major vascular surgery, coronary artery bypass surgery, or other cardiac surgery, subjects with congenital congestive heart failure, preeclampsia, eclampsia, diabetes mellitus, hypertension, coronary artery disease, proteinuria, renal insufficiency, glomerular filtration below the normal range, cirrhosis, serum creatinine above the normal range, or sepsis, or subjects exposed to NSAIDs, cyclosporines, tacrolimus, aminoglycosides, foscarnet, ethylene glycol, heme, myosin, ifosfamide, heavy metals, methotrexate, radiopaque contrast agents, or streptozotocin, are all preferred subjects for monitoring risk according to the methods described herein. This list is not meant to limit the invention. Herein, "pre-existing" means that a risk factor is present when a body fluid sample is obtained from a subject. In a particularly preferred embodiment, the subject is selected for risk stratification based on an existing diagnosis of impaired renal function, reduced renal function, or ARF.
In other embodiments, the methods described herein for assessing renal status are methods for diagnosing renal injury in a subject, i.e., assessing whether a subject has impaired renal function, reduced renal function, or ARF. in these embodiments, the results of the assessment, e.g., the measured concentration of one or more markers selected from the group consisting of soluble p-selectin, a protein NOV homolog, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 (and most preferably active caspase-3), and soluble platelet endothelial adhesion molecule, are correlated with whether a change in renal status has occurred.
In preferred diagnostic embodiments, the methods comprise diagnosing the occurrence or nonoccurrence of an injury to renal function and correlating the results of the analysis with the occurrence or nonoccurrence of such an injury. For example, each measured concentration is compared to a threshold value. For a positive marker, an increased likelihood of developing an injury to renal function corresponds to a subject having a measured concentration greater than a threshold value (relative to a likelihood that the corresponding measured concentration is below the threshold value); alternatively, an increased likelihood of the nonoccurrence of an injury to renal function may correspond to the subject when the measured concentration is below the threshold (relative to a likelihood corresponding when the measured concentration is above the threshold). For a negative going marker, an increased likelihood of developing an injury to renal function corresponds to the subject when the measured concentration is below the threshold (relative to the likelihood corresponding to when the measured concentration is above the threshold); alternatively, an increased likelihood of not developing an injury to renal function corresponds to the subject when the measured concentration is above the threshold (relative to a likelihood corresponding when the measured concentration is below the threshold).
In other preferred diagnostic embodiments, the methods comprise diagnosing the occurrence or nonoccurrence of reduced renal function and correlating the results of the analysis with the occurrence or nonoccurrence of an injury causing the reduction in renal function. For example, each measured concentration may be compared to a threshold value. For a positive marker, an increased likelihood of an injury causing reduced renal function occurring corresponds to the subject when the measured concentration is greater than the threshold (relative to the likelihood corresponding to the measured concentration being below the threshold); alternatively, an increased likelihood of the nonoccurrence of an injury causing reduced renal function may correspond to the subject when the measured concentration is below the threshold (relative to the likelihood corresponding to when the measured concentration is above the threshold). For a negative going marker, an increased likelihood of an injury causing reduced renal function occurring corresponds to the subject when the measured concentration is below the threshold (relative to a likelihood corresponding to when the measured concentration is above the threshold); alternatively, an increased likelihood of not developing an injury that causes reduced renal function may correspond to the subject when the measured concentration is above the threshold (relative to a likelihood corresponding when the measured concentration is below the threshold).
In other preferred diagnostic embodiments, the methods comprise diagnosing the occurrence of ARF and correlating the results of the analysis with the occurrence of damage that causes ARF. For example, each measured concentration may be compared to a threshold value. For positive markers, an increased likelihood of developing damage that causes ARF corresponds to the subject when the measured concentration is greater than the threshold (relative to the likelihood of corresponding measured concentrations being below the threshold); alternatively, an increased likelihood of no occurrence of injury causing ARF may correspond to the subject when the measured concentration is below the threshold (relative to the likelihood of corresponding measured concentrations being above the threshold). For a negative going marker, an increased likelihood of developing damage that causes ARF corresponds to the subject when the measured concentration is below the threshold (relative to a likelihood corresponding to when the measured concentration is above the threshold); alternatively, an increased likelihood of not developing an injury that causes ARF may correspond to the subject when the measured concentration is above the threshold (relative to corresponding to a likelihood when the measured concentration is below the threshold).
In other preferred diagnostic embodiments, the methods comprise diagnosing the subject as in need of renal replacement therapy and correlating the results of the analysis with the need for renal replacement therapy. For example, each measured concentration is compared to a threshold value. For a positive marker, an increased likelihood of an injury occurring that produces a need for renal replacement therapy corresponds to the subject when the measured concentration is greater than the threshold (relative to the likelihood when the corresponding measured concentration is below the threshold); alternatively, an increased likelihood of the nonoccurrence of an injury that produces a need for renal replacement therapy may correspond to the subject when the measured concentration is below the threshold (relative to the likelihood of the corresponding measured concentration being above the threshold). For a negative going marker, an increased likelihood of the occurrence of an injury that produces a need for renal replacement therapy corresponds to the subject when the measured concentration is below the threshold (relative to a likelihood corresponding when the measured concentration is above the threshold); alternatively, an increased likelihood of not developing an injury that results in need of renal replacement therapy may correspond to the subject when the measured concentration is above the threshold (relative to a likelihood corresponding when the measured concentration is below the threshold).
In other preferred diagnostic embodiments, the methods comprise diagnosing the subject as in need of kidney transplantation and correlating the results of the analysis with the need for kidney transplantation. For example, each measured concentration is compared to a threshold value. For positive markers, an increased likelihood of the occurrence of an injury that requires kidney transplantation corresponds to the subject when the measured concentration is greater than the threshold (relative to the likelihood when the corresponding measured concentration is below the threshold); alternatively, an increased likelihood of nonoccurrence of an injury that would result in need of kidney transplantation may correspond to the subject when the measured concentration is below the threshold (relative to the likelihood corresponding to when the measured concentration is above the threshold). For a negative going marker, an increased likelihood of the occurrence of an injury that produces a need for kidney transplantation corresponds to the subject when the measured concentration is below the threshold (relative to a likelihood corresponding when the measured concentration is above the threshold); alternatively, an increased likelihood of not developing an injury that requires kidney transplantation may correspond to the subject when the measured concentration is above the threshold (relative to a likelihood corresponding when the measured concentration is below the threshold).
In other embodiments, the methods described herein for assessing renal status are methods for monitoring renal injury in a subject, i.e., assessing whether renal function is improving or worsening in a subject who has suffered an injury, decrease or arf, in which embodiments the assay results, e.g., the measured concentration of one or more markers selected from the group consisting of soluble p-selectin, a protein homologous to NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 (and most preferably active caspase-3) and soluble platelet endothelial adhesion molecule, are correlated with whether a change in renal status occurs.
In preferred monitoring embodiments, the methods comprise monitoring the renal status of a subject having an impairment of renal function, and correlating the results of the analysis to whether the renal status of the subject has changed. For example, the measured concentration is compared to a threshold value. For a positive marker, when the measured concentration is above a threshold, a worsening renal function may correspond to a subject; alternatively, an improvement in renal function may correspond to the subject when the measured concentration is below the threshold. For a negative going marker, a worsening renal function may correspond to a subject when the measured concentration is below the threshold; alternatively, the improvement in renal function may correspond to the subject when the measured concentration is above the threshold.
In other preferred monitoring embodiments, the methods comprise monitoring the renal status of a subject having reduced renal function and correlating the results of the analysis to whether the renal status of the subject has changed. For example, the measured concentration is compared to a threshold value. For a positive marker, when the measured concentration is above a threshold, a worsening renal function may correspond to a subject; alternatively, an improvement in renal function may correspond to the subject when the measured concentration is below the threshold. For a negative going marker, a worsening renal function may correspond to a subject when the measured concentration is below the threshold; alternatively, the improvement in renal function may correspond to the subject when the measured concentration is above the threshold.
In other preferred monitoring embodiments, the methods comprise monitoring the renal status of a subject having acute renal failure, and correlating the results of the analysis to whether the renal status of the subject has changed. For example, the measured concentration is compared to a threshold value. For a positive marker, when the measured concentration is above a threshold, a worsening renal function may correspond to a subject; alternatively, an improvement in renal function may correspond to the subject when the measured concentration is below the threshold. For a negative going marker, a worsening renal function may correspond to a subject when the measured concentration is below the threshold; alternatively, the improvement in renal function may correspond to the subject when the measured concentration is above the threshold.
In other preferred monitoring embodiments, the methods comprise monitoring the renal status of the subject at risk for an injury to renal function caused by the pre-renal, intra-renal, or post-renal presence of one or more known risk factors for ARF, and correlating the results of the analysis with whether the renal status of the subject has changed. For example, the measured concentration is compared to a threshold value. For a positive marker, when the measured concentration is above a threshold, a worsening renal function may correspond to a subject; alternatively, an improvement in renal function may correspond to the subject when the measured concentration is below the threshold. For a negative going marker, a worsening renal function may correspond to a subject when the measured concentration is below the threshold; alternatively, the improvement in renal function may correspond to the subject when the measured concentration is above the threshold.
In other embodiments, the methods of assessing renal status described herein are methods for classifying a subject's renal injury, i.e., determining whether the subject's renal injury is pre-, intra-, or post-renal, and/or further subdividing these classes into subclasses, such as acute tubular injury, acute glomerulonephritis, acute tubulointerstitial nephritis, acute vascular nephropathy, or osmotic disease, and/or corresponding likelihood of developing a particular stage of RIFLE, in these embodiments, the results of the analysis, e.g., the results of the analysis of one or more markers selected from the group consisting of soluble p-selectin, a protein NOV homolog, a soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble tumor necrosis factor 2-adhesion-caspase, heat shock protein adhesion-3-like enzyme (HSP), and the following preferred embodiments are platelet adhesion-3 adhesion-like molecules.
In preferred classified embodiments, these methods comprise determining whether the renal injury in the subject is pre-, intra-or post-renal; and/or further classifying these into subclasses, such as acute tubular injury, acute glomerulonephritis, acute tubulointerstitial nephritis, acute vascular renal disease, or osmotic disease; and/or corresponding the likelihood to the subject that will progress to a particular RIFLE stage, and correlating the results of the analysis to the subject's classification of injury. For example, the measured concentration is compared to a threshold value, and when the measured concentration is higher than the threshold value, corresponds to a specific category; alternatively, a different category may be assigned to the subject when the measured concentration is below the threshold.
Various methods may be used by those skilled in the art to achieve the desired threshold for these methods. For example, the threshold may be determined by selecting 75th, 85 th that represents the percentage of renal injury markers measured in normal subjectsth,90th,95thOr 99th concentration, was determined from a population of normal subjects. Alternatively, the threshold may be determined from a "diseased" population of subjects, e.g., those suffering from an injury or having a predisposition to suffer an injury (e.g., progression to ARF or some other clinical outcome, such as death, dialysis, kidney transplantation, etc.), by selecting 75th, 85 th representative of the percentage of kidney injury markers measured in the diseased subjectth,90th,95thOr 99th concentration. In another alternative embodiment, the threshold value may be determined from a previously measured renal injury marker for the same subject; that is, a temporary change in the level of a kidney injury marker in a subject can be used to correlate risk to the subject.
The foregoing discussion is not intended to suggest, however, that the kidney injury markers of the present invention must be compared to corresponding individual thresholds. Methods for combining the analysis results may include using multivariate log regression, log linear simulation, neural network analysis, n-of-m analysis, hierarchical decision analysis, calculating the proportion of markers, and the like. This list is not intended to be limiting. In these methods, the composition result determined by combining the individual markers can be processed as long as it is itself a marker; that is, a threshold value for the composition result as described herein can be determined for the individual marker, and the composition result for the individual patient is compared to the threshold value.
The ability to distinguish between specific tests of two populations can be established using ROC analysis. For example, a ROC curve established from a "first" subpopulation that is preset for one or more future changes in renal status and a "second" subpopulation that is not so preset and the area under the curve provides a measurement test quality can be used to evaluate the ROC curve. Preferably, the test described herein provides a ROC curve area greater than 0.5, preferably at least 0.6, more preferably 0.7, still more preferably at least 0.8, even more preferably at least 0.9, and most preferably at least 0.95.
In some aspects, the measured concentration of one or more kidney injury markers or the composition of these markers can be treated as a continuous variable. For example, any particular concentration may translate into a corresponding likelihood of a subject having reduced renal function in the future, having a renal injury, being classified, and in an alternative embodiment, a threshold may provide an acceptable level of specificity and sensitivity, dividing the subject population into "bins," such as a "first" subpopulation (e.g., pre-placed in one or more future changes in renal function, having an injury, being classified, etc.) and a "second" subpopulation that is not pre-placed. The threshold is selected to separate the first and second populations by one or more of the following measures of accuracy:
an odd ratio of greater than 1, preferably at least about 2 or greater or about 5 or less, more preferably at least about 3 or greater or about 0.33 or less, still more preferably at least about 4 or greater or about 0.25 or less, even more preferably at least about 5 or greater or about 0.2 or less, and most preferably at least about 10 or greater or about 0.1 or less;
a specificity of greater than 0.5, preferably at least about 0.6, more preferably at least about 0.7, still more preferably at least about 0.8, even more preferably at least about 0.9, and most preferably at least about 0.95, with a corresponding sensitivity of greater than 0.2, preferably greater than about 0.3, more preferably greater than about 0.4, still more preferably at least about 0.5, even more preferably about 0.6, still more preferably greater than about 0.7, still more preferably greater than about 0.8, more preferably greater than about 0.9, and most preferably greater than about 0.95;
a sensitivity of greater than 0.5, preferably at least about 0.6, more preferably at least about 0.7, still more preferably at least about 0.8, even more preferably at least about 0.9 and most preferably about 0.95, with a corresponding specificity of greater than 0.2, preferably greater than about 0.3, more preferably greater than about 0.4, still more preferably at least about 0.5, even more preferably about 0.6, still more preferably greater than about 0.7, still more preferably greater than about 0.8, more preferably greater than about 0.9 and most preferably greater than about 0.95;
at least about 75% sensitivity, combining at least about 75% specificity;
a forward likelihood ratio (estimated as sensitivity/(1-specificity)) of greater than 1, at least about 2, more preferably at least about 3, still more preferably at least about 5, and most preferably at least about 10; or
The negative likelihood ratio (estimated as (1-sensitivity)/specificity) is less than 1, less than or equal to about 0.5, more preferably less than or equal to about 0.3, and most preferably less than or equal to about 0.1.
The term "about" for any of the measurements described herein above refers to +/-5% of the given measurement.
Multiple thresholds can be used to assess the renal status of a subject. For example, a "first" subpopulation that is predisposed to one or more future changes in renal status, the occurrence of injury, classification, etc., and a "second" subpopulation that is not predisposed may be combined into a single group. The group is then divided into three or more equal divisions (called tertiles, quartiles, quintiles, etc., based on the number of subdivisions). Odd ratios correspond to subjects based on falling into a reclassification. If one is considered to be divided into triplicates, the lowest or highest tertile may be used as a reference for comparison to other reclassifications. This reference reclassification corresponds to an odd ratio of 1. the second tertile corresponds to the odd ratio associated with the first tertile. That is, some of the second tertile may be 3 times more likely to suffer from one or one future change in renal status than some of the first tertile. The third tertile also corresponds to the odd scale associated with the first tertile.
In some embodiments, the assay method is an immunoassay. The antibodies used in these assays will specifically bind to the full-length kidney injury marker of interest, and may also bind to one or more polypeptides "associated" therewith, as that term is defined below. A variety of immunoassay formats are known to those of skill in the art. Preferred body fluid samples are selected from: urine, blood, serum, saliva, tears, and plasma.
The above method steps should not be disturbed to mean that the renal injury marker assay results are used for isolation in the methods described herein. However, other variables or other clinical markers may be included in the methods described herein. For example, methods of risk stratification, diagnosis, classification, monitoring, etc., may combine the results of the analysis with one or more measured subject variables selected from the group consisting of: demographic information (e.g., weight, gender, age, race), medical history (e.g., family history, type of surgery, pre-existing disease, such as aneurysm, congestive heart failure, preeclampsia, eclampsia, diabetes, hypertension, coronary artery disease, proteinuria, renal insufficiency, or sepsis, species of toxin exposure, such as NSAIDs, cyclosporines, tacrolimus, aminoglycosides, foscarnet, ethylene glycol, heme, myosin, ifosfamide, heavy metals, methotrexate, radiopaque contrast agents, or streptozotocin), clinical variables (e.g., blood pressure, body temperature, number of breaths), risk scores (APACHE score, predxt score, TIMI risk score for UA/NSTEMI, Framingham risk score), glomerular filtration rate, estimated glomerular filtration rate, urine production, serum or plasma creatinine concentration, blood glucose concentration, glucose concentration, glucose, Urine creatinine concentration, sodium excretion fraction, urine sodium concentration, ratio of urine creatinine to serum or plasma creatinine, urine specific gravity, urine isotonicity, ratio of urine urea nitrogen to plasma urea nitrogen, ratio of plasma BUN to creatinine, renal failure index estimated as urine sodium/(urine creatinine/plasma creatinine), serum or plasma Neutrophil Gelatinase (NGAL) concentration, urine NGAL concentration, serum or plasma cystatin C concentration, serum or plasma cardiac troponin concentration, serum or plasma BNP concentration, serum or plasma NTproBNP concentration, serum or plasma proBNP concentration. Other measures of renal function that can be combined with the results of one or more renal injury marker assays are described below and described in Harrison's Principles of Internal Medicine,17th Ed, McGraw Hill, New York, pages 1741-.
When more than one marker is measured, the separate markers may be measured in samples taken at the same time or may be determined by obtaining samples at different times (e.g., earlier or later). Separate markers may also be measured on the same or different body fluid samples. For example, one kidney injury marker can be measured in a serum or plasma sample and another kidney injury marker can be measured in a urine sample. Furthermore, the corresponding likelihood may combine the results of a single kidney injury marker assay with temporal changes in one or more additional variables.
In various related aspects, the invention also relates to devices and kits for carrying out the methods described herein. Suitable kits include reagents sufficient to perform an assay for at least one of the kidney injury markers, together with instructions for performing the threshold comparison.
In some embodiments, the reagents for performing these assays are provided in assay devices, and these assay devices may include kits. Preferred reagents may include one or more solid phase antibodies including antibodies that detect the binding of a desired biomarker target to a solid support. Under sandwich immunoassay conditions, these reagents may also include one or more detectably labeled antibodies, including antibodies that detect the binding of the desired biomarker target to the detectable label. Other optional elements provided as part of the analytical device are described below.
Detectable labels may include molecules that are themselves detectable (e.g., fluorophores, electrochemical labels, ecl (electrochemiluminescent) labels, metal chelates, colloidal metal particles, etc.) and molecules that are indirectly detected by the production of detectable reaction products (e.g., enzymes such as horseradish, peroxidase, alkaline phosphatase) or by using specific binding molecules that are themselves detectable (e.g., labeled antibodies bound to secondary antibodies, biotin, digoxigenin, maltose, oligonucleotide histidine, 2, 4-dinitrobenzene, phenyl arsenate, ssDNA, dsDNA).
The signal generated by the signal generating element may be represented using various optical, acoustic, and electrochemical methods known in the art. Examples of detection models include fluorescence, radiochemical detection, reflection, absorption, amperometric, conductance, impedance, interference measurements, ellipsometric measurements, and the like. In some of these methods, the solid phase antibody is coupled to a transducer (e.g., a diffraction grating, an electrochemical sensor, etc.) for generating a signal, while in other embodiments, the signal is generated by a transducer that is spatially separated from the solid phase antibody (e.g., a fluorometer using an excitation light source and an optical detector). This list is not meant to be limiting. Antibody-based biosensors may also be used to determine the presence and amount of an analyte, which optionally obviates the need for a label molecule.
Detailed Description
The present invention relates to methods and compositions for diagnosing, differentially diagnosing, risk staging, monitoring, classifying, and determining a treatment regimen for a patient having or at risk of developing an injury to renal function, reduced renal function, and/or acute renal failure by measuring one or more markers of renal injury, reduced renal function, and/or acute renal failure in various embodiments, a measured concentration of one or more markers, or one or more markers associated therewith, associated with a renal status of a subject is selected from the group consisting of soluble p-selectin, a protein homologous to protein NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, leukocyte elastase, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 (and most preferably active caspase-3), and soluble platelet adhesion molecule.
For the purposes herein, the following definitions apply:
as used herein, an "injury to renal function" is a sudden (within 14 days, preferably within 7 days, more preferably within 72 hours, still more preferably within 48 hours) measurable decrease in measured renal function. Such an injury can be identified, for example, by a decrease in tubular filtration rate or an assessment of GRR, a decrease in urine output, an increase in serum creatinine, an increase in serum cystatin C, a need for renal replacement therapy, and the like. An "improvement in renal function" is a sudden (within 14 days, preferably within 7 days, more preferably within 72 hours, still more preferably within 48 hours) measurable increase in the time renal function is measured. Preferred methods for measuring and/or assessing GFR are described below.
As used herein, "reduced renal function" is a sudden (within 14 days, preferably within 7 days, more preferably within 72 hours, still more preferably within 48 hours) decrease in renal function, as identified by an absolute increase in serum creatinine of greater than or equal to 0.1mg/dl (. gtoreq.8.8. mu. mol/L), a percentage increase in serum creatinine of greater than or equal to 20% (1.2-fold over baseline), or a decrease in urine output (recorded oliguria of less than 0.5 ml/kg/h).
As used herein, "acute renal failure" or "ARF" is a sudden (within 14 days, preferably within 7 days, more preferably within 72 hours, still more preferably within 48 hours) decrease in renal function that is identified by an absolute increase in serum creatinine of greater than or equal to 0.3mg/dl (. gtoreq.26.4. mu. mol/L), a percentage increase in serum creatinine of greater than or equal to 50% (1.5 times baseline) or a decrease in urine output (recorded oliguria of less than 0.5ml/kg/h for 6 hours). The term is synonymous with "acute kidney injury" or "AKI".
In this regard, it will be understood by those skilled in the art that the signal obtained from the immunoassay is a direct result of the complex formed between one or more antibodies and the target biomolecule (i.e., analyte) and the polypeptide containing the requisite epitope attached to the antibody. However, such assays can detect full-length biomarkers and the assay results are expressed as the concentration of the relevant biomarker, the signal from the assay being the result of virtually all such "immunologically active" polypeptides present in the sample. Expression of biomarkers can also be determined by non-immunoassay methods, including protein measurements (e.g., dot blot, western blot, chromatography, mass spectrometry, etc.) and nucleic acid measurements (mRNA quantitation). This list is not meant to be limiting.
The term "P-selectin" as used herein refers to one or more polypeptides derived from a P-selectin precursor (Swiss-Prot P16109(SEQ ID NO:1)) present in a biological sample.
Most preferably, the p-selectin assay detects one or more soluble forms of p-selectin. The P-selectin is a single-pass type I membrane protein, with a large extracellular domain, most or all of which is present in soluble form as a result of an alternative splicing event that deletes all or part of the transmembrane domain or as a result of proteolytic membrane-bound form. In the case of immunoassays, one or more antibodies that bind to an epitope in the extracellular domain can be used to detect these soluble forms. The following domains have been identified in p-selectin:
the term "protein NOV homologue" as used herein refers to one or more polypeptides derived from a precursor of the protein NOV homologue (Swiss-Prot P48745(SEQ ID NO:2)) present in a biological sample.
The following domains have been identified in proteins homologous to the protein NOV:
the term "epithelial cell growth factor receptor" as used herein refers to one or more polypeptides derived from precursors of epithelial cell growth factor receptors present in a biological sample (Swiss-Prot P00533(SEQ ID NO: 3)).
Most preferably, the epithelial growth factor receptor assay detects soluble forms of one or more epithelial growth factor receptors. The epithelial cell growth factor receptor is a single pass type I membrane protein, with a large extracellular domain, most or all of which is present in a soluble form of the epithelial cell growth factor receptor produced by an alternative splicing event that deletes all or part of the transmembrane domain or by proteolysis of a membrane-bound form. In the case of an immunoassay, one or more antibodies that bind to an epitope in the extracellular domain can be used to detect these soluble forms. The following domains have been identified in the epithelial cell growth factor receptor:
the term "nerve growth factor-4" as used herein refers to one or more polypeptides derived from a nerve growth factor-4 precursor (Swiss-Prot Q9HB63(SEQ ID NO:4)) present in a biological sample.
The following domains are identified in nerve growth factor-4:
the term "haptoglobin" as used herein refers to one or more polypeptides derived from haptoglobin precursor (Swiss-Prot P00738(SEQ ID NO:5)) present in a biological sample.
The following domains have been identified in haptoglobin:
the term "α -1-antitrypsin" as used herein refers to one or more polypeptides derived from α -1-antitrypsin precursor (Swiss-Prot P01009(SEQ ID NO:6)) present in a biological sample.
The following domains have been identified in α -1-antitrypsin:
the term "leukocyte elastin" as used herein refers to one or more polypeptides derived from a leukocyte elastin precursor (Swiss-Prot P08246(SEQ ID NO:7)) present in a biological sample.
The following domains have been identified in leukocyte elastin:
the term "tumor necrosis factor receptor superfamily member 6" as used herein refers to one or more polypeptides derived from a tumor necrosis factor receptor superfamily member 6 precursor (Swiss-Prot P25445(SEQ ID NO:8)) present in a biological sample.
Most preferably, the tumor necrosis factor receptor superfamily member 6 assay detects one or more soluble forms of tumor necrosis factor receptor superfamily member 6. Tumor necrosis factor receptor superfamily member 6 is a single pass type I membrane protein with a large extracellular domain, most or all of which is present in a soluble form of tumor necrosis factor receptor superfamily member 6, produced by an alternative splicing event that deletes all or part of the transmembrane domain or by proteolysis of a membrane-bound form. In the case of immunoassays, one or more antibodies in the extracellular domain that bind to an epitope can be used to detect these soluble forms. The following domains have been identified in member 6 of the tumor necrosis factor receptor superfamily:
the term "member 6 of the tumor necrosis factor ligand superfamily" as used herein refers to one or more polypeptides derived from a precursor of member 6 of the tumor necrosis factor ligand superfamily present in a biological sample (Swiss-Prot P48023(SEQ ID NO: 9)).
Most preferably, the tumor necrosis factor ligand superfamily member 6 assay detects one or more soluble forms of tumor necrosis factor ligand superfamily member 6. Tumor necrosis factor ligand superfamily member 6 is a single pass type II membrane protein with a large extracellular domain, most or all of which is present in a soluble form of tumor necrosis factor ligand superfamily member 6, produced by an alternative splicing event that deletes all or part of the transmembrane domain or by proteolysis of the membrane-bound form. In the case of immunoassays, one or more antibodies in the extracellular domain that bind to an epitope can be used to detect these soluble forms. The following domains have been identified in member 6 of the tumor necrosis factor ligand superfamily:
the term "intercellular adhesion molecule 2" as used herein refers to one or more polypeptides derived from precursors of intercellular adhesion molecule 2 (Swiss-Prot P13598(SEQ ID NO:10)) present in a biological sample.
Most preferably, the intercellular adhesion molecule 2 assay detects soluble forms of the intercellular adhesion molecule 2. The intercellular adhesion molecule 2 is a single-pass type I membrane protein, with a large extracellular domain, most or all of which is present in the soluble form of the intercellular adhesion molecule 2, produced by alternative splicing events that delete all or part of the transmembrane domain or produced by proteolysis of the membrane-bound form. In the case of immunoassays, one or more antibodies in the extracellular domain that bind to an epitope can be used to detect these soluble forms. The following domains have been identified in intercellular adhesion molecule 2:
the term "caspase-3" as used herein refers to one or more polypeptides derived from a precursor of caspase-3 (Swiss-Prot P42574(SEQ ID NO:11)) present in a biological sample.
The following domains have been identified in caspase-3:
suitable assays may be used to recognize only the p17 subunit of caspase-3, may recognize only the p12 subunit of caspase-3 (24kDa) instead of full-length caspase-3, may recognize only full-length caspase-3, or may recognize one subunit of full-length caspase-3. In this regard, it will be understood by those skilled in the art that the signal obtained from the immunoassay is the direct structure of a complex formed by one or more antibodies and the target biomolecule (i.e., analyte) and a polypeptide containing the epitope to which the antibody binds as necessary. However, this assay detects the full length caspase-3 molecule, the assay structure is expressed as the concentration of caspase-3, and the signal from the assay is actually the result of all such "immunoreactive" polypeptides present in the sample.
The term "platelet endothelial cell adhesion molecule" as used herein refers to one or more polypeptides derived from a precursor of platelet endothelial cell adhesion molecule (Swiss-Prot P16284(SEQ ID NO:12)) present in a biological sample.
Most preferably, the platelet endothelial cell adhesion molecule assay detects one or more soluble forms of platelet endothelial cell adhesion molecules. Platelet endothelial cell adhesion molecules are single-pass type I membrane proteins with large extracellular domains, most or all of which are present in soluble forms of platelet endothelial cell adhesion molecules, produced by alternative splicing events that delete all or part of the transmembrane domain or by proteolysis of membrane-bound forms. In the case of immunoassays, one or more antibodies in the extracellular domain that bind to an epitope can be used to detect these soluble forms. The following domains have been identified in platelet endothelial cell adhesion molecules:
the term "heat shock protein β -1" as used herein refers to one or more polypeptides derived from a precursor of heat shock protein β -1 (Swiss-Prot P04792(SEQ ID NO:13)) present in a biological sample.
The term "epidermal growth factor receptor" as used herein refers to one or more polypeptides derived from a precursor of epidermal growth factor receptor (Swiss-Prot P00533(SEQ ID NO:14)) present in a biological sample.
Most preferably, the epidermal growth factor receptor assay detects one or more soluble forms of epidermal growth factor receptor. The epidermal growth factor receptor is a single-pass type I membrane protein, with a large extracellular domain, most or all of which is present in a soluble form of the epidermal growth factor receptor, produced by an alternative splicing event that deletes all or part of the transmembrane domain or by proteolysis of a membrane-bound form. In the case of immunoassays, one or more antibodies in the extracellular domain that bind to an epitope can be used to detect these soluble forms. The following domains have been identified in epidermal growth factor receptors:
the term "signal related to the presence or amount" of an analyte as used herein reflects this understanding. The analytical signal is typically related to the presence and amount of analyte by using a standard curve estimated using known concentrations of the analytes of interest. The term analyte, as used herein, is "configured to detect" an analyte if the analyte can produce a detectable signal indicative of the amount or presence of a physiologically relevant concentration of the analyte. Because the epitope of the antibody is at the 8 amino acid position, an immunoassay configured to detect the relevant label will also detect polypeptides associated with the label sequence, such that those polypeptides contain an epitope that must bind to the antibody or to the antibody for analysis. The term "relevant marker" as used herein in relation to a biomarker described herein, such as one of the kidney injury markers, refers to one or more fragments, variants, etc. of a particular marker or its biosynthetic parent that can be detected as a surrogate for the marker itself or as an independent biomarker. The term also refers to one or more polypeptides in a biological sample derived from biomarker precursors complexed with additional substances such as binding proteins, receptors, heparin, lipids, carbohydrates, and the like.
The term "positive going" marker, as used herein, refers to a marker that is determined to be elevated in a subject having a disease or disorder (relative to a subject not having a disease or disorder). The term "negative going" marker, as used herein, refers to a marker that is determined to be decreased in a subject having a disease or disorder (relative to a subject not having a disease or disorder).
The term "subject" as used herein refers to a human or non-human organism. Thus, the methods and compositions described herein are useful for human and veterinary disease. Further, the present invention can also be used for post mortem analysis when the subject is preferably a living organism. Preferably the subject is a human, and most preferably is a "patient", as used herein, refers to a living human receiving medical care for a disease or condition. This includes persons without established disease who are being examined for pathological phenomena.
Preferably, the analyte is measured in the sample. Such a sample may be obtained from the subject or may be obtained from a biological substance that is desired to be provided to the subject. For example, a sample may be obtained from a kidney being evaluated for potential transplantation to a subject and an analyte measurement used to evaluate pre-existing damage to the kidney. Preferably the sample is a body fluid sample.
The term "body fluid sample" as used herein refers to a body fluid sample obtained for the purpose of diagnosis, prognosis, classification or evaluation of the relevant subject, e.g., a patient or transplant donor. In some embodiments, such a sample may be obtained for the purpose of determining the outcome of an ongoing condition or the effect of a treatment regimen for a condition. Preferred body fluid samples include blood, serum, plasma, cerebrospinal fluid, urine, saliva, sputum, pleural effusion. Furthermore, those skilled in the art will appreciate that some bodily fluid samples may be more readily analyzed after fractionation and purification steps, e.g., separation of whole blood into serum or plasma components.
The term "diagnosis" as used herein refers to a method by which one of skill in the art can estimate and/or determine the likelihood of whether a patient has a given disease or condition. In the context of the present invention, "diagnosis" includes the use of the results of an assay, most preferably an immunoassay, for a kidney injury marker of the present invention, optionally together with other clinical features, to obtain a sample and assay from a patient to achieve a diagnosis (i.e., the occurrence or non-occurrence) of acute kidney injury or ARF. Such a diagnosis is "determined", which is not meant to imply that the diagnosis is 100% accurate. Many biomarkers are indicative of a variety of conditions, and clinicians in the field do not use biomarkers to cause a vacuum of information, rather than using test results with other clinical indicators to effect a diagnosis. Thus, a measured level of a biomarker on one side of the predetermined diagnostic threshold indicates a greater likelihood of the subject developing a disease relative to a measured level on the other side of the predetermined diagnostic threshold.
Similarly, prognostic risk represents the likelihood that a given process or outcome will occur. Changes in the level or level of a prognostic indicator, which in turn is associated with an increased likelihood of disease (e.g., worsening renal function, future ARF, or death), refers to "indicating an increased likelihood" of an adverse outcome in a patient.
Marker analysis
In general, an immunoassay comprises contacting a sample containing or suspected of containing a biomarker of interest with at least one antibody that specifically binds to the biomarker. A signal is then generated indicating the presence or amount of complexes formed by the binding of the polypeptides in the sample to the antibodies. The signal is then correlated with the presence or amount of the biomarker in the sample. Many methods and devices for detecting and analyzing biomarkers are well known to those skilled in the art. See, for example, U.S. patent 6,143,576; 6,113,855; 6,019,944, respectively; 5,985,579, respectively; 5,947,124, respectively; 5,939,272, respectively; 5,922,615, respectively; 5,885,527, respectively; 5,851,776, respectively; 5,824,799, respectively; 5,679,526, respectively; 5,525,524, respectively; and 5,480,792 and the immunological Handbook, David Wild, ed.stockton Press, New York,1994, each of which is incorporated herein by reference, including tables, drawings and claims.
Assay devices and assay methods known in the art can use labeled molecules in various sandwich, competitive or non-competitive assay formats to generate signals related to the presence and amount of relevant biomarkers. Suitable analytical formats also include chromatography, mass spectrometry and protein "imprinting" methods. In addition, some methods and devices, such as biosensors and optical immunoassays, can be used to determine the presence and amount of an analyte without the need for a labeling molecule. See U.S. Pat. nos. 5,631,171; and 5,955,377, each of which is incorporated herein by reference, including all tables, figures, and claims. Those skilled in the art will also appreciate that robotic devices include, but are not limited to, BeckmanAbbottRocheDade BehringThe system is also in an immunoassay analyzer capable of performing an immunoassay. However, any suitable immunoassay may be used, e.g., enzyme linked immunosorbent assay (ELISA), Radioimmunoassay (RIA), competitive binding assays, etc.
Antibodies or other polypeptides may be immobilized on a variety of solid supports for analysis. Solid phases useful for immobilizing specific binding members include those developed in solid phase binding assays and/or used as solid phases. Examples of suitable solid phases include membrane filters, cellulose-based papers, beads (including polymeric, latex and paramagnetic particles), glass, silicon wafers, microparticles, nanoparticles, Tenta gel, Agro gel, PEGA gel, SPOCC gel and multiwell plates. The assay strip may be prepared by coating the antibody or antibodies under assay on a solid support. The strip may then be immersed in a test sample and then subjected to rapid washing and detection steps to produce a measurable signal, such as a coloured spot. The antibody or other polypeptide may be bound to a specific region of the assay device by direct conjugation to the surface of the assay device or by indirect binding. In the latter case, the antibody or other polypeptide may be immobilized on a particle or other solid support, and the solid support is immobilized on the surface of the device.
Bioassays require methods for detection and one of the most common methods for quantifying the results is to conjugate a detectable label to a protein or nucleic acid that has an affinity for one of the components in the biological system under study. Detectable labels can include molecules that are themselves detectable (e.g., fluorophores, electrochemical labels, metal chelates, etc.) and molecules that are indirectly detected by the production of detectable reaction products (e.g., enzymes such as horseradish peroxidase, alkaline phosphatase, etc.) or molecules that are indirectly detected by their own detectable specific binding molecules (e.g., biotin, digoxigenin, maltose, oligohistidine, 2, 4-dinitrobenzene, phenyl arsenate, ssDNA, dsDNA, etc.).
The preparation of solid phase and detectably labeled conjugates typically involves the use of chemical cross-linkers, which comprise at least two reactive groups and can be divided into homofunctional cross-linkers (comprising identical reactive groups) and heterofunctional cross-linkers (comprising non-identical reactive groups), homofunctional cross-linkers, which are non-specifically coupled by amine, thiol or reaction, are available from a number of commercial sources, maleimides, alkyl and aryl halides, and α -haloacyl groups react with thiol groups to form thioether linkages, while pyridyl disulfides react with thiol groups to form mixed disulfides.
In some aspects, the invention provides kits for analyzing the kidney injury markers. The kit comprises reagents for analyzing at least one test sample comprising at least one kidney injury marker antibody. The kit may also include equipment and instructions for performing one or more of the diagnostic and/or prognostic relationships described herein. Preferred kits include antibody pairs for performing a sandwich assay or labeled species for performing a competition assay for analysis. Preferably, the antibody pair comprises a first antibody conjugated to a solid phase and a second antibody conjugated to a detectable label, wherein each of the first and second antibodies binds to a kidney injury label. Most preferably, each of the antibodies is a monoclonal antibody. The instructions for using the kit and performing the association may be in the form of a label, which refers to any writing or recording material that can be adhered to or placed with the kit at any time during the manufacturing process, shipping, sale, or use. For example, the term label includes advertising leaflets and brochures, packaging materials, instructions, audio or video tapes, compact discs and printed matter directly printed on the kit.
Antibodies
The term "antibody" as used herein refers to a peptide or polypeptide derived from substantially an immunoglobulin based on coding or post-immunoglobulin gene simulation or immunoglobulin genes or fragments thereof, capable of specifically binding an antigen or epitope. See, e.g., Fundamental Immunology,3rd Edition, w.e.paul, ed., Raven Press, n.y. (1993); wilson (1994; J.Immunol.methods 175: 267-273; Yarmush (1992) J.biochem.Biophys.Methodss 25: 85-97. the term antibody includes antigen binding proteins, i.e., "antigen binding sites" (e.g., fragments, subsequences, Complementarity Determining Regions (CDRs)) that retain the ability to bind to an antigen, including i) Fab fragments, monovalent fragments consisting of the VL, VH, CL and CH1 domains, ii) F (ab') 2 fragments, bivalent fragments including two Fab fragments linked by a disulfide bridge at the hinge region; iii) Fd fragment consisting of the VH and CH1 domains; iv) Fv fragments, consisting of the single-arm VL and VH domains of an antibody; v) dAb fragments (Ward et al, (1989) Nature 341:544-546) which are composed of VH domains; and vi) an isolated Complementarity Determining Region (CDR). Single chain antibodies may be included in the term "antibody" by reference.
The antibodies used in the immunoassays described herein preferably specifically bind to the kidney injury markers of the present invention. The term "specifically binds" is not meant to indicate that the antibody binds exclusively to its desired target, as described above, the antibody binds to any polypeptide exhibiting binding of the antibody to an epitope. However, an antibody "specifically binds" 5-fold greater than its affinity for a non-target molecule that does not display a suitable epitope if it has an affinity for the desired target. Preferably, the affinity of the antibody for the target molecule is at least about 5-fold, preferably 10-fold, more preferably 25-fold, even more preferably 50-fold, and most preferably 100-fold or more greater than the affinity for the non-target molecule. In preferred embodiments, preferred antibody binding affinities are at least about 107M-1And preferably about 108M-1To about 109M-1About 109M-1To about 1010M-1Or about 1010M-1To about 1012M-1
Affinity was estimated as Kd=koff/kon(koffIs the dissociation rate constant, konIs the binding rate constant and Kd is the equilibrium constant). Affinity can be determined by measuring the fractional range (r) of labeled ligand at different concentrations (c) at equilibrium. Data were generated using Scatchard equation: r/c is plotted as K (n-r), where r is the number of moles of acceptor/moles of ligand range at equilibrium; c is the free ligand concentration at equilibrium; k is the equilibrium binding constant; n is the number of ligand binding sites per receptor molecule. By mapping analysis, r/c is plotted on the Y-axis and r is plotted on the X-axis, thus generating a Scatchard plot. Measurement of antibody affinity by Scatchard analysis is well known in the art. See, e.g., van Erp et al, J.Immunoassasay 12: 425-; methods program, Comput, Nelson and Griswoldms Biomed.27:65-8,1988
The term "epitope" refers to an antigenic determinant capable of specifically binding to an antibody. Epitopes are typically composed of chemically active surface groups of molecules, such as amino acids or sugar side chains, and typically have specific three-dimensional structural characteristics, as well as specific charge characteristics. The difference between the structural and non-structural epitopes is that binding to the former, but not to the latter, is lost in the presence of denaturants.
Various publications discuss the use of phage display technology to generate and screen polypeptide libraries for binding selected analytes. See, for example, Cwirla et al, Proc. Natl. Acad. Sci. USA 87,6378-82, 1990; devlin et al, Science 249, 404-; and Ladner et al, U.S. Pat. No.5,571,698. The basic concept of the phage display method is to establish a physical bond between the polypeptide-encoding DNA to be screened and the polypeptide. This physical binding is provided by the phage particle, which displays the polypeptide as part of a capsid that encapsulates the phage genome encoding the polypeptide. The physical binding established between the polypeptide and its genetic material allows for simultaneous mass screening of a very large number of bacteriophages carrying different polypeptides. Phage displaying polypeptides with affinity for the target bind to the target, and these phage are enriched by affinity screening of the target. The recognition of the polypeptides displayed by these phages can be determined by their respective genomes. Using these methods, polypeptides identified as having binding affinity to a desired target can be synthesized in large quantities by conventional methods. See, for example, U.S. patent No. 6,057,098, which is incorporated herein by reference, including all tables, figures, and claims.
Antibodies generated by these methods can be screened by a first screen for affinity and specificity and related purified polypeptides, and if desired, the results compared to the affinity and specificity of antibodies having polypeptides that are desired to be excluded from binding. The screening step may comprise immobilizing the purified polypeptide in separate wells of a microtiter plate. The solution containing the potential antibody or group of antibodies is then placed in the respective microtiter wells and incubated for about 30 minutes to 2 hours. The microtiter wells are then washed and a labeled secondary antibody (e.g., an anti-rat antibody conjugated to alkaline phosphatase if the ascending antibody is a rat antibody) is added to the wells for incubation for about 30 minutes, followed by washing. By adding the matrix to the wells, a color reaction will occur in which the antibody is present to the immobilized polypeptide.
Such recognized antibodies can then be further analyzed for affinity and specificity in selected assay designs. In the development of immunoassays for target proteins, the purified target protein functions as a standard by which the sensitivity and specificity of immunoassays using selected antibodies are judged. Because the binding affinities of the various antibodies differ, some antibody pairs (e.g., in a sandwich assay) can spatially interfere with each other, etc., the performance of an assay for an antibody can be a more important measure than the absolute affinity and specificity of the antibody.
Analyzing correlations
As used herein, the term "correlate," when using biomarkers, refers to comparing the presence or amount of a biomarker in a patient's body to the presence or amount of a biomarker known to have or be in a human having a given condition or known not to have a given condition. Typically, the results in the form of biomarker concentrations are compared to a predetermined threshold selected to reveal the likelihood of whether the disease has occurred or some future outcome.
The selection of a diagnostic threshold includes consideration of the likelihood of disease among other factors, factors for correct and incorrect diagnosis at different test thresholds, assessment of the outcome of treatment (failure to treat) based on diagnosis. For example, when considering administering a specific treatment with high efficiency and low risk level, little testing is required because the clinician can accept a large amount of diagnostic uncertainty. On the other hand, clinicians often require more certainty of diagnosis where the selected treatment is inefficient and at greater risk. Thus, the cost/benefit analysis includes selecting a diagnostic threshold.
Suitable thresholds may be determined in various ways. For example, one recommended diagnostic threshold for diagnosing acute myocardial infarction using cardiac troponin is 97.5 of the concentration seen in normal populationsthPercentage (D). Another method may be to observe a continuous sample of the same patient, where a previous "baseline" is used to monitor temporal changes in biomarker levels.
Population studies can also be used to select decision thresholds. Receiver operating characteristics ("ROC") arise from the field of signal detection theory developed during world war ii for analyzing radar images, and ROC analysis is often used to select a threshold that best distinguishes "diseased" subpopulations from "non-diseased" subpopulations. False positives in this case occur when individuals detect positivity but actually have no disease. False positives, on the other hand, occur when an individual tests negative, indicating that it is healthy, but in fact does have a disease. To plot the ROC curve, the True Positive Rate (TPR) and the False Positive Rate (FPR) are determined as continuously varying decision thresholds. Since TPR corresponds to sensitivity and FPR equals 1-specificity, the ROC plot is sometimes referred to as the sensitivity vs (1-specificity) plot. The full test will have an area under the ROC curve of 1.0; the random test would have an area of 0.5. The threshold is selected to provide an acceptable level of specificity and sensitivity.
As used herein, "diseased" refers to a population having one characteristic (either present in a disease or condition or with some consequence), and "non-diseased" refers to a population lacking the characteristic. While a single decision threshold is the simplest application of this method, multiple decision thresholds may be used. For example, below a first threshold, the absence of disease may correspond to a relatively high degree of confidence, and above a second threshold, the presence of disease may correspond to a relatively high degree of confidence. An uncertainty may be considered between the two thresholds. This is meant to be exemplary in nature.
In addition to threshold comparisons, other methods of correlating analysis results for patient classification (whether disease is occurring, likelihood of outcome, etc.) include hierarchical decision graphs, rule sets, Bayesian methods, and neural network methods. These methods can generate a likelihood value representing the degree to which the degree of the receptor belongs in one of a plurality of classifications.
Measurement test accuracy, as described in Fischer et al, Intensive Care Med.29: 1043-. These measurements include sensitivity and specificity, predictive value, probability ratio, diagnostic odd ratio and ROC curve area. The area under the curve (AUC) of this ROC plot corresponds to the likelihood of a ranker ranking randomly selected positive instances higher than randomly selected negative instances. The area under the ROC curve can be considered to be equivalent to the Mann-Whitney U test, which tests for media differences between the scores obtained in the two groups considered if they were consecutive data sets, or the area under the ROC curve can be considered to be equivalent to the Wilcoxon test rating.
As noted above, suitable tests may exhibit one or more of the following results with respect to various measurements: a specificity of greater than 0.5, preferably at least 0.6, more preferably at least 0.7, still more preferably at least 0.8, even more preferably at least 0.9, and most preferably at least 0.95, with a corresponding sensitivity of greater than 0.2, preferably greater than 0.3, more preferably greater than 0.4, still more preferably at least 0.5, even more preferably 0.6, still more preferably greater than 0.7, still more preferably greater than 0.8, more preferably greater than 0.9, and most preferably greater than 0.95; a sensitivity of greater than 0.5, preferably at least 0.6, more preferably at least 0.7, still more preferably at least 0.8, even more preferably at least 0.9, and most preferably at least 0.95, with a corresponding specificity of greater than 0.2, preferably greater than 0.3, more preferably greater than 0.4, still more preferably at least 0.5, even more preferably 0.6, still more preferably greater than 0.7, still more preferably greater than 0.8, more preferably greater than 0.9, and most preferably greater than 0.95; at least 75% sensitivity combined with at least 75% specificity, ROC curve area greater than 0.5, preferably at least 0.6, more preferably 0.7, still more preferably at least 0.8, even more preferably at least 0.9 and most preferably at least 0.95; an odd ratio is other than 1, preferably at least about 2 or greater or about 0.5 or less, more preferably at least about 3 or greater or about 0.33 or less, still more preferably at least about 4 or greater or about 0.25 or less, even more preferably at least about 5 or greater or about 0.2 or less, and most preferably at least about 10 or greater or about 0.1 or less; the positive likelihood ratio (estimated as sensitivity/(1-specificity)) is greater than 1, at least 2, more preferably at least 3, still more preferably at least 5, and most preferably at least 10, and the negative likelihood ratio (estimated as (1-sensitivity)/specificity) is less than 1, less than or equal to 0.5, more preferably less than or equal to 0.3, and most preferably less than or equal to 0.1.
Additional clinical indices may be combined with the results of the kidney injury marker assays of the invention these include the biomarkers associated with renal status examples include the following, which describe the common biomarker name, followed by the biomarker or its parent protein Swiss-Prot entry number actin (P68133), adenosine deaminase binding protein (DPP4, P27487), α -1-acid glycoprotein 1(P02763), α -1-microglobulin (P02760), albumin (P02768), angiotensinogen (rennin P00797), annexin A2(P07355), α -glucuronidase (P08236), B-2-microglobulin (P61679), β -galactosidase (P78), BMP-7(P18075), natriuretic peptide (proBNP, BNP 32, proNTBNP, P60), calbindin protein (S100-betalin, Ph, EP 06563757, EP.
For risk stratification purposes, adiponectin (Q15848), alkaline phosphatase (P05186), aminopeptidase N (P15144), calbindin D28k (P05937), cystatin C (P01034), 8 subunit of F1FO ATPase (P03), gamma-glutamyltransferase (P19440), GSTa (α -glutathione-S-transferase, P08263), GSTpi (glutathione-S-transferase P; GSTclass-pi; P09211), IGFBP-1(P08833), IGFBP-2(P18065), IGFBP-2452 (P245692), integral membrane protein 1(Itm1, P46977), interleukin-6 (P05231), interleukin-8 (P10145), interleukin-18 (Q16), IP-10 (IP-14110), soluble protein of TNF-. gamma.1 protein, EP 4526, alpha. -Pro-P, EP-Asp-P-2000 receptor, EP-Asp-9, protein kinase P-Asp-III, (EP-P) and protein kinase P-7, protein kinase P-IV-8 (EP-P-Asp-7), protein kinase P-Asp 7, protein kinase P-Asp-7, protein kinase protein III, GSTcp-S-P-7, protein III, protein.
Other clinical indicators that can be combined with the renal injury marker assay results of the invention include demographic information (e.g., weight, gender, age, race), medical history (e.g., family history, type of surgery, pre-existing disease such as aneurysm, congestive heart failure, preeclampsia, eclampsia, diabetes, hypertension, coronary artery disease, proteinuria, renal insufficiency or sepsis, exposure to toxins such as NSAIDs, cyclosporines, tacrolimus, aminoglycosides, foscarnet, ethylene glycol, heme, myoglobin, ifosfamide, heavy metals, methotrexate, radiopaque contrast agents or streptozotocin), clinical variables (e.g., blood pressure, body temperature, respiration rate), risk scores (APACHE score, pret score, TIMI risk score for UA/USTEMI, Framingham risk score), total urine protein measurements, glomerular filtration rate, estimated glomerular filtration rate, urine volume, serum or plasma creatinine concentration, renal papillary antigen 1(RPA1) measurement, renal papillary antigen 2(RPA2) measurement, urine creatinine concentration, sodium excretion fraction, urea sodium concentration, ratio of urine creatinine to serum or plasma creatinine, urine specific gravity, urine osmolality, ratio of urine urea nitrogen to plasma urea nitrogen, ratio of plasma BUN to creatinine, and/or renal failure index are estimated as urea sodium/(urine creatinine/plasma creatinine). Other measurements that can be combined with the results of the renal injury marker analysis are described below and are described in Harrison's Principles of Internal Medicine,17thEd., McGrawHill, New York, p. 1741-1830 and in Current Medical diagnostics&Treatment2008,47thEd, McGraw Hill, New York, th785 pages 815, the entire contents of each of which are incorporated herein by reference.
Combining the analysis results/clinical indices in this manner may include using multivariate log regression, log linear modeling, neural network analysis, n-of-m analysis, hierarchical decision graphs, and the like. Such list is not meant to be limiting.
Diagnosis of acute renal failure
As noted above, the terms "acute renal injury" and "acute renal failure" as used herein are defined, in part, in terms of changes in serum creatinine relative to a baseline value. Most definitions of ARF have common elements including the use of serum creatinine and urine output. The patient may have renal insufficiency without an available baseline measurement of renal function for comparison. In this event, one method can estimate baseline serum creatinine by assuming that the patient initially has a normal GFR. Glomerular Filtration Rate (GFR) is the volume of fluid filtered by the glomerular capillaries into the Bowman's capsule per unit time. Glomerular Filtration Rate (GFR) can be estimated by measuring any chemical that has a stable level in the blood and is freely filtered from reabsorption and excretion by the kidneys. GFR is expressed by units of ml/min:
by normalizing the GFR to body surface area, it can be assumed that the GFR is approximately 75-100 ml/min per 1.73m 2. Thus, the measurement speed is the amount of substance in the urine resulting from the volume of blood that can be estimated.
There are many different techniques for estimating or evaluating glomerular filtration rate (GFR or eGFR). However, in clinical practice, creatinine clearance is used to measure GFR. Creatinine is essentially produced by the body (creatinine is a metabolite of creatine, which is found in muscle). It is freely filtered through the glomerulus, but is excreted in small amounts by the tubules, so creatinine clearance is overestimated by GFR 10% to 20%. This margin of error is acceptable and is considered to measure the filtrate with creatinine clearance.
Creatinine clearance (CCr) can be estimated if the urinary concentration value of creatinine (Ucr), the urine flow rate (V), and the plasma concentration of creatinine (Pcr) are known. Since the resulting urine concentration and urine flow rate produce the rate of excretion of creatinine, creatinine clearance may also be referred to as its excretion rate (UcrXV) divided by plasma concentration. This is generally expressed by the following mathematical formula:
a 24 hour urine collection is typically performed from bladder contents of an empty bladder one morning to the next morning, and then compared to a blood test:
to allow comparison of results for different body sizes, the CCr was calculated by calibration to Body Surface Area (BSA) and expressed as ml/min/1.73m 2 compared to average body size men. However, most adults have BAS close to 1.7(1.6-1.9), and essentially obese or young patients should have a CCr calibrated by their actual BSA:
the accuracy of creatinine clearance measurements (even when collection is complete) is limited because glomerular filtration rates decrease, creatinine excretion increases, and thus, there is less rise in serum creatinine. As a result, creatinine excretion is much greater than the filtration load, resulting in a potentially large overestimation of GFR (a two-fold large difference). However, for clinical purposes, it is important to determine whether renal function is stable or worsening or improving. This is usually determined by measuring serum creatinine alone. As with serum creatinine clearance, serum creatinine does not accurately reflect the GFR of the non-steady state symptoms of ARF. Nevertheless, the degree of change in serum creatinine relative to baseline reflects changes in GFR. Serum creatinine is easily and readily measured, and is specific for renal function.
For the purpose of determining urine output on a mL/kg/hour basis, it is sufficient to collect and measure urine hourly. In this case, for example, only 24-hour cumulative output is available, no patient body weight is provided, and a small change in the RIFLE urine output index has been described. For example, Bagshaw et al, Nephrol. Dial. Transplant.23: 1203-: <35mL/h (Risk), <21mL/h (Injury) or <4mL/h (failure).
Selecting a treatment regimen
Once a diagnosis is obtained, the clinician can readily select a treatment regimen that is compatible with the diagnosis, such as initiating renal replacement therapy, delivering a compound that eliminates known damage to the kidney, kidney transplantation, delaying or avoiding a procedure known damage to the kidney, modifying diuretic administration, initiating targeted therapy, and the like. One skilled in the art will recognize that the appropriate treatments for a variety of diseases discussed are relevant to the diagnostic methods described herein. See, e.g., Merck Manual of diagnosis and Therapy,17th Ed. In addition, because the methods and compositions described herein provide prognostic information, the markers of the invention can be used to detect a course of treatment. For example, an improved or worsened prognostic status may indicate whether a particular treatment is effective.
It will be readily understood by those skilled in the art that the present invention is fully adapted to be carried out with the objects and obtaining the ends and advantages mentioned, as well as those inherent therein. Examples are provided herein to represent preferred embodiments, and are provided herein for illustrative purposes and are not intended to limit the scope of the present invention.
Example 1: contrast-induced nephropathy sample collection
The purpose of this sample collection study is to collect plasma and urine samples as well as clinical data from patients before and after receiving intravascular contrast media. About 250 adults undergoing a radiographic/angiographic procedure involving intravascular administration of iodinated contrast media are involved. To participate in this study, each patient must meet and not meet the following exclusion criteria:
selection criteria
Males and females 18 years or older;
undergoing a radiological imaging/angiography procedure (e.g., CT scan or coronary intervention) including intravascular administration of a contrast medium;
it is desirable to admit the subject at least 48 hours after administration of the contrast agent.
Written informed consent can and will be provided for participation in the study and adherence to all study steps.
Exclusion criteria
A renal transplant recipient;
acute worsening of renal function prior to the contrast agent step;
already receiving dialysis (acute or chronic) or about to require dialysis when involved;
would be expected to undergo a major surgical procedure (e.g. cardiopulmonary extracorporeal circulation) or an additional imaging step with contrast media to have a significant risk of further renal injury within 48 hours after administration of the contrast media;
participating in interventional clinical studies with experimental treatment within the first 30 days;
infection with Human Immunodeficiency Virus (HIV) or hepatitis virus is known.
EDTA anti-conjugated blood samples (10mL) and urine samples (10mL) were collected from each patient immediately prior to the first administration of the contrast agent (and after any prior step hydration). Blood and urine samples are then collected at 4 (+ -0.5), 8 (+ -1), 24 (+ -2), 48 (+ -2) and 72 (+ -2) hours after the last administration of contrast medium during the step of labeling the contrast agent. Blood is collected by direct venipuncture or by other available venous access, such as the presence of a femoral sheath, central venous line, peripheral intravascular line, or hep-lock. The blood samples thus studied were processed into plasma at the clinical site, frozen and transported to the asset Medical, inc. Study urine samples were frozen and transported to asset Medical, Inc.
Serum creatinine was administered on site immediately prior to the first administration of the contrast agent (after any pre-step hydration) and immediately 4 (+ -0.5) hours, 8 (+ -1) hours, 24 (+ -2) hours, 48 (+ -2) hours and 72 (+ -2) hours after the last administration of the contrast agent (ideally at the same time as the study sample was obtained). In addition, the status of each patient was assessed by day 30 with associated additional serum creatinine measurements and urine creatinine measurements, requiring dialysis, admission status and adverse clinical outcomes (including death).
Prior to administration of the contrast agent, each patient corresponded to a risk based on the following assessments: systolic pressure<80mm Hg is 5 min; the aortic inner capsule reverse balloon pump is divided into 5 points; congestive heart failure (grade III-IV or pulmonary edema history) score 5; age (age)>4 points after 75 years old; hematometer level male<39% of women<3 points for 35 percent; diabetes mellitus is divided into 3 points; the volume of the 100mL contrast medium is 1 min; serum creatinine levels>1.5g/dL 4 min or estimated GFR 40-60 mL/min/1.73m22 min, 20-40 mL/min/1.73m2The number of the segments is 4,<20mL/min/1.73m2this risk is corresponded to the risk of CIN and dialysis as follows: 5 or less total score-7.5% CIN risk, dialysis risk-0.04%; 6-10 total points are CIN risk-14%, dialysis risk-0.12%; 11-16 total points-26.1% of CIN risk and-1.09% of dialysis risk;total score>16-57.3% risk of CIN and-12.8% risk of dialysis.
Example 2: cardiac surgery sample collection
The purpose of this sample collection study is to collect plasma and urine samples as well as clinical data of patients before and after cardiovascular surgery (a step known to potentially impair renal function). Approximately 900 adults underwent this procedure. In order to participate in the study, each patient must meet all of the following selection criteria and not the exclusion criteria:
selection criteria
Males and females 18 years or older;
undergoing cardiovascular surgery;
the Toronto/Ottawa predicted risk index has a renal replacement risk score of at least 2 (Wijeysundersea et al, JAMA 297:1801-9, 2007); and
written informed consent can and will be provided for participation in the study and adherence to all study steps.
Exclusion criteria
The pregnancy is already carried out;
prior kidney transplantation;
involvement in prior acute renal function deterioration (e.g., RIFLE of any kind);
already receiving dialysis (acute or chronic) or requiring dialysis immediately upon participation;
currently participating in another clinical study or another clinical study expected to participate in cardiac surgery within seven days, including drug infusion or AKI treatment intervention;
infection with Human Immunodeficiency Virus (HIV) or hepatitis virus is known.
EDTA anti-conjugated blood samples (10mL), whole blood (3mL) and urine samples (35mL) were collected from each patient within 3 hours prior to the first incision (and after any pre-step hydration). Any blood and urine samples were collected 4 (+ -0.5), 8 (+ -1), 24 (+ -2), 48 (+ -2) hours after surgery, and seven days after each day if the subject was in the hospital and then on the third day. Blood is collected by direct venipuncture or by other available venous access (e.g., the presence of a femoral sheath, central venous line, peripheral intravascular line, or hep-lock). The blood samples thus studied were frozen and transported to an asset Medical, inc. Study urine samples were frozen and transported to astute medical, Inc.
Example 3: acute disease subject sample collection
The aim of this study was to collect samples from patients with acute disease. About 900 adults are expected to participate in ICU for at least 48 hours. To participate in the study, each patient must meet all of the following selection criteria and not meet the exclusion criteria:
selection criteria
Males and females 18 years or older;
study population 1: 300 patients with at least one of the following symptoms:
shock (SBP <90mmHg and/or booster support is required to maintain MAP >60mmHg and/or a recorded drop in SBP of at least 40 mmHg); and
sepsis;
study population 2: 300 patients with at least one of the following symptoms:
participants recorded the specified 24-hour IV antibiotics in a Computer Program Order Entry (CPOE);
participants were exposed to the contrast medium within 24 hours;
increased intra-abdominal pressure is associated with acute decompensated heart failure; and
enter the ICU due to a previously severe trauma and may require 48 hours of admission at the ICU;
study population 3: about 300 patients
Known risk factors and acute kidney injury are expected to accompany hospital admissions through intensive care (ICU or ED) (e.g., sepsis, hypotension/shock (shock ═ contracting BP <90mmHg and/or requiring booster support to maintain MAP >60mmHg and/or recorded SBP reduction >40mmHg), severe trauma, hemorrhage or major surgery); and/or is expected to be admitted to the ICU for at least 24 hours.
Exclusion criteria
The pregnancy is already carried out;
individuals under public care;
involvement in prior acute renal function deterioration (e.g., RIFLE indicators of any kind);
dialysis (acute or chronic) was received within the first 5 days of participation or required immediately upon participation;
known to be infected with Human Immunodeficiency Virus (HIV) or hepatitis virus;
only the above criteria encompassed by SBP <90mmHg were met, with no shock in the opinion of the attending physician or researcher.
After providing informed consent, EDTA-anti-conjugated blood samples (10mL) and urine samples (25-30mL) were collected from each patient. Blood and urine samples were then collected at 4 (+ -0.5) and 8 (+ -1) hours after administration of the contrast agent (if used), at 12 (+ -1), 24 (+ -2), and 48 (+ -2) hours after participation, and thus daily to day 7 to day 14, when the subject was hospitalized. Blood is collected by direct venipuncture or by other available venous access (e.g., the presence of a femoral sheath, central venous line, peripheral intravascular line, or hep-lock). The blood samples thus studied were clinically processed into plasma, frozen and transported to an asset Medical, inc. Study urine samples were frozen and transported to asset Medical, Inc.
Example 4 immunoassay format
The analyte is measured using standard sandwich enzyme immunoassay techniques. The primary antibody bound to the analyte is immobilized in the wells of a 96-well polystyrene microplate. Analyte standards and test samples are dropped into appropriate wells and any analyte is surrounded by immobilized antibody. After washing to remove unencapsulated material, horseradish peroxidase-conjugated secondary antibody is added to the wells and the remaining analyte binds, thereby forming a sandwich complex (if present) and primary antibody with the analyte. After washing to remove any unencapsulated antibody-enzyme reagent, a matrix solution containing tetramethylbenzidine and hydrogen peroxide was added to the wells. The spread of the color bands is proportional to the amount of analyte present in the sample. The band evolution stops and the bands are measured at 540nm or 570 nm. The analyte concentration corresponds to the test sample, compared to a standard curve measured by an analyte standard.
The concentrations in the samples were expressed as soluble p-selectin-ng/mL, protein NOV homologous protein-pg.mL, neurogenic factor 4-ng/mL, haptoglobin-mg/mL, α -1-antitrypsin-mg/mL, leukocyte elastase-ng/mL, soluble tumor necrosis factor receptor superfamily member 6-pg/mL, soluble tumor necrosis factor ligand superfamily member 6-pg/mL, soluble intercellular adhesion molecule 2-units/mL, caspase 3 (active) -ng/mL, soluble platelet endothelial adhesion molecule-ng/mL, heat shock protein β -1-ng/mL, soluble epidermal growth factor receptor-pg/mL.
Example 5 overt healthy donors and Chronic disease patient samples
Human urine samples from donors without known chronic or acute disease were purchased from two suppliers (golden west Biologicals, inc.,27625 Commerce Center Dr., Temecula, CA 92590 and Virginia medical Research, inc.,915 First clinical Rd., Virginia Beach, VA 23454). Urine samples were transported and stored frozen below-20 ℃. Demographic information provided by the supplier for each donor included gender, race (black/white), smoking status and age.
Human urine samples from donors with various chronic diseases including congestive heart failure, coronary artery disease, chronic kidney disease, chronic obstructive pulmonary disease, diabetes and hypertension were purchased from Virginia Medical Research, inc.,915 First renal Rd., Virginia Beach, VA 23454. The urine samples were transported and stored frozen at temperatures below 20 ℃. The vendor provides a case report with age, sex, race (black/white), smoking status, alcohol use, height, weight, diagnosis of chronic disease, current medications and previous surgical conditions for individual donors.
Example 6 renal injury markers for assessing renal status in RIFLE stage 0 patients
Based on the maximal phase reached within 7 days, which is involved by RIFLE criteria, patients in Intensive Care Unit (ICU) are classified as non-injured (0), injured risk (R), injured (I) and exhausted (F) according to renal status.
Two groups of patients were defined, the first group of patients did not progress beyond stage 0, and the second group of patients reached stage R, I, F within ten days. To express normal marker fluctuations that occur in patients in the ICU and thereby assess the utility of markers for monitoring AKI status, marker levels in urine samples from a first population of patients were collected. The concentration of the marker in urine samples from patients who reached 0 hours, 24 hours, 48 hours before the R, I, or F phase in patients in the second population was measured. In the following table, the time "before maximum stage" indicates that samples were taken at this time, divided into three groups of +/-12 hours relative to the time before the particular patient reached the lowest disease stage. For example, 24 hours before this example (0 and R, I, F) refers to 24 hours (+/-12 hours) before stage R is reached (or I if no sample is in stage R, or F if no sample is in stage R or I).
Each marker was measured by standard immunoassay methods using commercially available assay reagents. Receiver Operator Characteristic (ROC) curves are generated and the area under each ROC curve (AUC) is determined. Patients in the second population are separated according to a reason for R, I or F stage based on serum creatinine measurements (sCr), based on Urine Output (UO) or based on determinations of serum creatinine measurements or urine output. That is, for those patients judged to be in the R, I, or F stage based on serum creatinine measurements alone, the stage 0 population may have included patients judged to be in the R, I, or F stage based on urine output, for those patients judged to be in the R, I, or F stage based on urine output alone, the stage 0 population may have included patients judged to be in the R, I, or F stage based on serum creatinine measurements, and for those patients judged to be in the R, I, or F stage based on serum creatinine measurements or urine output, the stage 0 population may include only patients in the stage 0 based on serum creatinine and urine output. Furthermore, for those patients judged to be in the R, I or F stage based on serum creatinine measurements or urine output, the judgment method that resulted in the most severe RIFLE stage was used.
The following descriptive statistics were obtained:
soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
Binding to globin:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Caspase 3 (active):
sCr or UO
sCr only
UO only
Soluble platelet endothelial cell adhesion molecule:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Soluble epidermal growth factor receptor:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE 0) and the second population (subjects who developed RIFLE R, I or F) was determined using ROC analysis. SE is the standard deviation of AUC, and n is the number of samples ("pts", as shown) from a single patient. Standard deviations are calculated as described in Hanley, j.a., and McNeil, b.j., The means and use of The area a Receiver Operating Characteristics (ROC) curve radio (1982)143: 29-36; p-values were calculated using a two-tailed Z-test. AUC <0.5 indicates a negative marker for comparison, and AUC >0.5 indicates a positive marker for comparison.
Soluble p-selectin:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.42 0.072 51 22 1.727
24 hours 0.59 0.072 51 24 0.214
48 hours 0.40 0.269 51 1 1.285
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.41 0.114 94 6 1.561
24 hours 0.58 0.117 94 7 0.479
48 hours 0.58 0.214 94 2 0.710
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.49 0.083 42 17 1.120
24 hours 0.66 0.074 42 22 0.031
48 hours 0.65 0.156 42 4 0.320
Protein NOV homologs:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.62 0.060 101 31 0.050
24 hours 0.69 0.062 101 26 0.003
48 hours 0.79 0.192 101 2 0.129
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.46 0.092 173 10 1.299
24 hours 0.54 0.096 173 10 0.652
48 hours 0.40 0.153 173 3 1.500
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.70 0.064 78 25 0.002
24 hours 0.76 0.062 78 23 0.000
48 hours 0.71 0.134 78 5 0.116
Nerve growth factor 4:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.57 0.095 52 12 0.462
24 hours 0.40 0.192 52 2 1.402
48 hours 0.88 0.221 52 1 0.082
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.56 0.152 86 4 0.689
24 hours 0.39 0.186 86 2 1.458
48 hours 0.24 0.191 86 1 1.828
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.54 0.101 38 11 0.678
24 hours 0.51 0.176 38 3 0.941
48 hours 0.92 0.189 38 1 0.026
Binding to globin:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.52 0.051 216 38 0.743
24 hours 0.55 0.046 216 51 0.291
48 hours 0.65 0.065 216 23 0.017
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.40 0.067 375 16 1.865
24 hours 0.52 0.065 375 21 0.777
48 hours 0.56 0.091 375 11 0.519
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.57 0.055 181 34 0.202
24 hours 0.56 0.049 181 45 0.224
48 hours 0.60 0.066 181 23 0.116
α -1-antitrypsin:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.44 0.049 216 38 1.816
24 hours 0.45 0.044 216 51 1.741
48 hours 0.49 0.063 216 23 1.134
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.40 0.067 375 16 1.864
24 hours 0.38 0.058 375 21 1.966
48 hours 0.43 0.084 375 11 1.581
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.48 0.054 181 34 1.261
24 hours 0.52 0.049 181 45 0.692
48 hours 0.50 0.064 181 23 1.019
Leukocyte elastase:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.60 0.056 103 36 0.071
24 hours 0.58 0.052 103 46 0.121
48 hours 0.52 0.067 103 23 0.771
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.50 0.086 226 12 0.988
24 hours 0.45 0.069 226 18 1.494
48 hours 0.59 0.092 226 11 0.344
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.56 0.061 88 31 0.303
24 hours 0.59 0.055 88 41 0.113
48 hours 0.49 0.069 88 22 1.155
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.63 0.062 117 28 0.040
24 hours 0.65 0.061 117 28 0.015
48 hours 0.76 0.163 117 3 0.106
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.49 0.098 194 9 1.065
24 hours 0.61 0.093 194 11 0.221
48 hours 0.58 0.151 194 4 0.580
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.69 0.068 92 22 0.005
24 hours 0.71 0.063 92 25 0.001
48 hours 0.80 0.112 92 6 0.008
Soluble tumor necrosis factor ligand superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.70 0.108 78 8 0.065
24 hours 0.78 0.082 78 12 0.001
48 hours 0.54 0.212 78 2 0.868
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.39 0.133 118 4 1.578
24 hours 0.57 0.125 118 6 0.553
48 hours 0.68 0.173 118 3 0.293
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.72 0.114 60 7 0.050
24 hours 0.69 0.099 60 10 0.061
48 hours 0.50 0.209 60 2 1.016
Soluble intercellular adhesion molecule 2:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.36 0.056 92 29 1.987
24 hours 0.44 0.062 92 26 1.671
48 hours 0.38 0.258 92 1 1.356
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.41 0.088 154 10 1.692
24 hours 0.50 0.095 154 10 0.992
48 hours 0.48 0.166 154 3 1.098
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.29 0.057 70 24 2.000
24 hours 0.41 0.065 70 24 1.811
48 hours 0.49 0.149 70 4 1.029
Caspase 3 (active):
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.57 0.075 51 22 0.351
24 hours 0.64 0.071 51 24 0.043
48 hours 0.94 0.166 51 1 0.008
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.53 0.124 94 6 0.813
24 hours 0.55 0.116 94 7 0.680
48 hours 0.75 0.203 94 2 0.223
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.59 0.084 42 17 0.302
24 hours 0.69 0.073 42 22 0.010
48 hours 0.77 0.143 42 4 0.058
Soluble platelet endothelial cell adhesion molecule:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.37 0.093 43 10 1.832
24 hours 0.37 0.154 43 3 1.593
48 hours nd nd 43 0 0.211
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.36 0.118 65 5 1.766
24 hours 0.41 0.158 65 3 1.452
48 hours 0.57 0.215 65 2 0.747
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.32 0.092 30 10 1.952
24 hours 0.36 0.156 30 3 1.627
48 hours nd nd 30 0 0.211
Heat shock protein β -1:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.54 0.088 54 14 0.674
24 hours 0.38 0.187 54 2 1.481
48 hours 0.56 0.302 54 1 0.854
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.70 0.123 88 6 0.095
24 hours 0.43 0.195 88 2 1.295
48 hours 0.28 0.152 88 2 1.854
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.55 0.094 40 13 0.581
24 hours 0.43 0.166 40 3 1.312
48 hours 0.63 0.306 40 1 0.683
Soluble epidermal growth factor receptor:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.52 0.074 51 22 0.756
24 hours 0.60 0.073 51 23 0.163
48 hours 0.53 0.299 51 1 0.922
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.37 0.108 93 6 1.768
24 hours 0.49 0.113 93 7 1.038
48 hours 0.87 0.163 93 2 0.023
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.61 0.084 42 17 0.169
24 hours 0.69 0.074 42 21 0.011
48 hours 0.66 0.155 42 4 0.301
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
Soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
Binding to globin:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Caspase 3 (active):
sCr or UO
sCr only
UO only
Soluble platelet endothelial cell adhesion molecule:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Soluble epidermal growth factor receptor:
sCr or UO
sCr only
UO only
Example 7 evaluation of renal injury markers for renal status in patients with RIFLE stages 0 and R
Patients were classified and analyzed as described in example 6. However, in the first cohort, patients who reached stage R but did not progress to stage I or F were grouped with patients from non-injury stage 0. In this example, the second population includes only patients who progressed to stage I or F. For the first population, the concentration of the marker in the urine sample is included. For the second population, marker concentrations in urine samples collected within 0, 24 and 48 hours of reaching expiration I or F are included.
The following descriptive statistics were obtained:
soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE 0 or R) and the second population (subjects who developed RIFLE I or F) was determined using ROC analysis.
Soluble p-selectin:
First group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.49 0.290 99 1 1.028
24 hours 0.65 0.079 99 16 0.059
48 hours 0.98 0.099 99 1 0.000
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 114 0 0.211
24 hours 0.78 0.161 114 3 0.085
48 hours nd nd 114 0 0.211
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.55 0.300 82 1 0.855
24 hours 0.66 0.082 82 15 0.046
48 hours 0.95 0.107 82 2 0.000
NOV homologs of proteins:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.45 0.096 167 9 1.376
24 hours 0.58 0.074 167 18 0.301
48 hours 0.43 0.159 167 3 1.345
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.64 0.301 198 1 0.638
24 hours 0.76 0.141 198 4 0.067
48 hours 0.50 0.206 198 2 1.000
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.46 0.097 133 9 1.350
24 hours 0.57 0.078 133 16 0.393
48 hours 0.46 0.164 133 3 1.187
Nerve growth factor 4:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.41 0.101 75 8 1.614
24 hours 0.40 0.189 75 2 1.415
48 hours 0.44 0.198 75 2 1.238
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.23 0.188 92 1 1.842
24 hours nd nd 92 0 0.211
48 hours 0.14 0.093 92 2 2.000
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.44 0.106 58 8 1.411
24 hours 0.42 0.195 58 2 1.325
48 hours 0.87 0.231 58 1 0.109
α -1-antitrypsin:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.49 0.064 351 21 1.156
24 hours 0.43 0.057 351 25 1.782
48 hours 0.41 0.075 351 13 1.763
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.43 0.122 428 5 1.430
24 hours 0.37 0.103 428 6 1.804
48 hours 0.35 0.110 428 5 1.829
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.54 0.068 294 20 0.557
24 hours 0.46 0.062 294 22 1.519
48 hours 0.44 0.078 294 13 1.524
Leukocyte elastase:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.62 0.075 202 17 0.107
24 hours 0.72 0.063 202 23 0.000
48 hours 0.57 0.085 202 13 0.424
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.25 0.139 260 2 1.925
24 hours 0.48 0.129 260 5 1.135
48 hours 0.54 0.133 260 5 0.782
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.60 0.076 174 17 0.165
24 hours 0.71 0.066 174 21 0.002
48 hours 0.58 0.086 174 13 0.357
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.31 0.104 189 5 1.925
24 hours 0.61 0.073 189 18 0.122
48 hours 0.72 0.131 189 5 0.092
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 225 0 0.211
24 hours 0.97 0.060 225 4 0.000
48 hours 0.68 0.211 225 2 0.406
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.29 0.100 148 5 1.961
24 hours 0.55 0.078 148 16 0.553
48 hours 0.72 0.132 148 5 0.101
Soluble tumor necrosis factor ligand superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.60 0.153 109 4 0.523
24 hours 0.66 0.115 109 7 0.154
48 hours 0.76 0.143 109 4 0.073
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 133 0 0.211
24 hours 0.58 0.213 133 2 0.718
48 hours 0.73 0.206 133 2 0.274
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.57 0.153 82 4 0.654
24 hours 0.65 0.137 82 5 0.266
48 hours 0.74 0.167 82 3 0.152
Soluble intercellular adhesion molecule 2:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.22 0.063 148 9 2.000
24 hours 0.44 0.070 148 18 1.582
48 hours 0.45 0.163 148 3 1.218
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.08 0.080 179 1 2.000
24 hours 0.40 0.134 179 4 1.536
48 hours 0.24 0.137 179 2 1.938
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.22 0.063 117 9 2.000
24 hours 0.44 0.074 117 16 1.591
48 hours 0.49 0.169 117 3 1.040
Heat shock protein β -1:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.43 0.102 78 8 1.509
24 hours 0.54 0.174 78 3 0.835
48 hours 0.57 0.214 78 2 0.742
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.81 0.263 96 1 0.235
24 hours 0.90 0.211 96 1 0.061
48 hours 0.33 0.169 96 2 1.691
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.46 0.107 61 8 1.285
24 hours 0.39 0.188 61 2 1.443
48 hours 0.67 0.301 61 1 0.568
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
Soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Example 8 evaluation of renal injury markers for renal status in patients progressing from stage R to stages I and F
Patients were classified and analyzed as described in example 6, but only those patients in the arrival period R were included in this example. The first population included patients who reached stage R but did not develop to stage I or F within 10 days, and the second population included only patients who developed to stage I or F. The concentration of marker in urine samples collected 12 hours within the arrival period R was included in the analysis for both the first and second populations.
The following descriptive statistics were obtained:
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE R) and the second population (subjects who developed RIFLE I or F) was determined using ROC analysis.
α -1-antitrypsin:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.48 0.088 33 16 1.153
24 hours 0.48 0.088 33 16 1.153
48 hours 0.48 0.088 33 16 1.153
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.81 0.127 14 5 0.013
24 hours 0.81 0.127 14 5 0.013
48 hours 0.81 0.127 14 5 0.013
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.39 0.095 25 13 1.750
24 hours 0.39 0.095 25 13 1.750
48 hours 0.39 0.095 25 13 1.750
Leukocyte elastase:
First group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.70 0.082 33 17 0.015
24 hours 0.70 0.082 33 17 0.015
48 hours 0.70 0.082 33 17 0.015
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.58 0.159 12 5 0.600
24 hours 0.58 0.159 12 5 0.600
48 hours 0.58 0.159 12 5 0.600
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.67 0.094 24 14 0.077
24 hours 0.67 0.094 24 14 0.077
48 hours 0.67 0.094 24 14 0.077
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.58 0.101 29 12 0.442
24 hours 0.58 0.101 29 12 0.442
48 hours 0.58 0.101 29 12 0.442
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.91 0.106 11 4 0.000
24 hours 0.91 0.106 11 4 0.000
48 hours 0.91 0.106 11 4 0.000
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.40 0.116 21 8 1.589
24 hours 0.40 0.116 21 8 1.589
48 hours 0.40 0.116 21 8 1.589
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Example 9 evaluation of renal injury markers for renal status in patients in RIFLE stage 0
Patients in Intensive Care Unit (ICU) were classified as non-injured (0), injured (R), injured (I) and exhausted (F) according to renal status based on participation in the maximal phase reached within 7 days as determined by RIFLE criteria.
Two groups of patients were defined, the first group of patients did not develop beyond stage 0, and the second group of patients reached stage R, I or F within ten days. To express the normal marker fluctuations that occur in patients in the ICU and thereby assess the utility of the marker for monitoring AKI status, marker levels in blood samples of a first population of patients were collected. The concentration of the marker in the plasma fraction of blood samples from patients who reached 0 hour, 24 hours, 48 hours before the R, I or F phase in the second group of patients was measured. In the following table, the "time before maximum phase" indicates that the sample was taken at this time, divided into three groups of +/-12 hours, relative to the time before the particular patient reached the minimum disease phase. For example, 24 hours prior to the example (0 for R, I, F) means 24 hours (+/-12 hours) prior to reaching the R phase (or I if no sample is in the R phase, or F if no sample is in the R or I phase).
Each marker was measured by standard immunoassay methods using commercially available assay reagents. Receiver Operator Characteristic (ROC) curves are generated and the area under each ROC curve (AUC) is determined. Patients in the second population were separated according to the reason for R, I or F stage based on serum creatinine measurements (sCr), based on Urine Output (UO) or based on determinations of serum creatinine measurements or urine output. That is, for those patients judged to be in the R, I, or F phase based on serum creatinine measurements alone, the phase 0 population may have included patients judged to be in the R, I, or F phase based on urine output, for those patients judged to be in the R, I, or F phase based on urine output alone, the phase 0 population may have included patients judged to be in the R, I, or F phase based on serum creatinine measurements, and for those patients judged to be in the R, I, or F phase based on serum creatinine measurements or urine output, the phase 0 population may include only patients in the phase 0 based on serum creatinine and urine output. Furthermore, for those patients judged to be in the R, I or F phase based on serum creatinine measurements or urine output, the judgment method that resulted in the most severe RIFLE phase was used.
The following descriptive statistics were obtained:
soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
Binding to globin:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Soluble platelet endothelial cell adhesion molecule:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE 0) and the second population (subjects who developed RIFLE R, I or F) was determined using ROC analysis. SE is the standard deviation of AUC, and n is the number of samples ("pts", as shown) from a single patient. Standard deviations are calculated as described in Hanley, j.a., and McNeil, b.j., The means and use of The area a Receiver Operating Characteristics (ROC) curve radio (1982)143: 29-36; p-values were calculated using a two-tailed Z-test. AUC <0.5 indicates a negative marker for comparison, and AUC >0.5 indicates a positive marker for comparison.
Soluble p-selectin:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.63 0.119 26 8 0.293
24 hours 0.47 0.091 26 17 1.236
48 hours nd nd 26 0 0.211
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.43 0.198 47 2 1.293
24 hours 0.41 0.100 47 9 1.626
48 hours 0.81 0.267 47 1 0.247
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.67 0.123 27 7 0.161
24 hours 0.51 0.105 27 11 0.962
48 hours 0.56 0.307 27 1 0.856
Protein NOV homologs:
first group v second group, determination of serum creatinine measurement or urine output
Max periodTime of day AUC SE nFirst group nSecond group p
0 hour 0.56 0.072 82 21 0.379
24 hours 0.56 0.073 82 20 0.447
48 hours 0.74 0.287 82 1 0.396
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.70 0.106 135 8 0.057
24 hours 0.60 0.090 135 12 0.262
48 hours 0.85 0.142 135 3 0.014
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.60 0.073 68 21 0.187
24 hours 0.58 0.087 68 14 0.370
48 hours 0.74 0.204 68 2 0.235
Nerve growth factor 4:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.56 0.091 56 13 0.482
24 hours 0.63 0.178 56 3 0.482
48 hours 0.79 0.275 56 1 0.299
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.73 0.120 88 6 0.050
24 hours 0.81 0.153 88 3 0.042
48 hours 0.35 0.175 88 2 1.619
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.63 0.090 41 14 0.147
24 hours 0.60 0.180 41 3 0.572
48 hours 0.83 0.257 41 1 0.200
Binding to globin:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.40 0.049 221 35 1.955
24 hours 0.41 0.042 221 51 1.971
48 hours 0.45 0.062 221 22 1.601
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.40 0.068 386 16 1.843
24 hours 0.45 0.062 386 21 1.620
48 hours 0.37 0.081 386 10 1.888
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.44 0.052 183 34 1.716
24 hours 0.48 0.048 183 45 1.396
48 hours 0.54 0.068 183 21 0.589
α -1-antitrypsin:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.29 0.042 221 35 2.000
24 hours 0.25 0.033 221 51 2.000
48 hours 0.28 0.049 221 22 2.000
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.39 0.066 386 16 1.905
24 hours 0.34 0.054 386 21 1.997
48 hours 0.38 0.083 386 10 1.842
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.35 0.048 183 34 1.998
24 hours 0.28 0.038 183 45 2.000
48 hours 0.26 0.049 183 21 2.000
Leukocyte elastase:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.63 0.061 84 31 0.027
24 hours 0.70 0.050 84 46 0.000
48 hours 0.73 0.066 84 22 0.001
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.64 0.089 200 12 0.117
24 hours 0.54 0.073 200 18 0.564
48 hours 0.61 0.097 200 10 0.254
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.57 0.066 76 27 0.282
24 hours 0.65 0.057 76 37 0.006
48 hours 0.67 0.072 76 20 0.020
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.67 0.076 97 17 0.027
24 hours 0.62 0.068 97 23 0.077
48 hours 0.52 0.210 97 2 0.922
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.74 0.119 155 6 0.046
24 hours 0.57 0.083 155 14 0.403
48 hours 0.66 0.174 155 3 0.371
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.70 0.080 78 15 0.013
24 hours 0.65 0.080 78 16 0.071
48 hours 0.58 0.176 78 3 0.662
Soluble tumor necrosis factor ligand superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.45 0.095 77 10 1.368
24 hours 0.62 0.092 77 12 0.193
48 hours 0.60 0.215 77 2 0.651
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.30 0.103 117 5 1.945
24 hours 0.54 0.115 117 7 0.703
48 hours 0.38 0.151 117 3 1.554
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.52 0.111 58 8 0.876
24 hours 0.57 0.102 58 10 0.492
48 hours 0.57 0.216 58 2 0.749
Soluble intercellular adhesion molecule 2:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.50 0.098 47 11 0.976
24 hours 0.17 0.093 47 3 2.000
48 hours nd nd 47 0 0.211
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.36 0.117 72 5 1.764
24 hours 0.27 0.124 72 3 1.938
48 hours 0.61 0.216 72 2 0.607
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.50 0.098 33 12 1.020
24 hours 0.31 0.143 33 3 1.808
48 hours nd nd 33 0 0.211
Soluble platelet endotheliumCell adhesion molecule:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.49 0.097 47 11 1.087
24 hours 0.39 0.157 47 3 1.515
48 hours nd nd 47 0 0.211
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.38 0.120 72 5 1.686
24 hours 0.55 0.175 72 3 0.762
48 hours 0.64 0.215 72 2 0.508
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.52 0.099 33 12 0.848
24 hours 0.35 0.153 33 3 1.661
48 hours nd nd 33 0 0.211
Heat shock protein β -1:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.34 0.076 57 14 1.965
24 hours 0.26 0.122 57 3 1.953
48 hours 0.08 0.081 57 1 2.000
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.52 0.123 91 6 0.894
24 hours 0.45 0.163 91 3 1.255
48 hours 0.84 0.176 91 2 0.053
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.25 0.067 42 15 2.000
24 hours 0.42 0.164 42 3 1.372
48 hours 0.04 0.044 42 1 2.000
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
Soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
Binding to globin:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Soluble platelet endothelial cell adhesion molecule:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Example 10 evaluation of renal injury markers for renal status in patients with RIFLE stages 0 and R
Patients were classified and analyzed as described in example 9. However, in the first cohort, patients who reached stage R but did not progress to stage I or F were grouped with patients from non-injury stage 0. In this example, the second population includes only patients who progressed to stage I or F. For the first population, the concentration of the marker in the plasma component of the blood sample is included. For the second population, the concentration of marker in plasma components of blood samples collected within 0, 24 and 48 hours up to expiration I or F is included.
The following descriptive statistics were obtained:
soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Soluble epidermal growth factor receptor:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE 0 or R) and the second population (subjects who developed RIFLE I or F) was determined using ROC analysis.
Soluble p-selectin:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 46 0 0.211
24 hours 0.47 0.090 46 13 1.233
48 hours 0.54 0.301 46 1 0.885
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 59 0 0.211
24 hours 0.53 0.175 59 3 0.859
48 hours nd nd 59 0 0.211
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour nd nd 40 0 0.211
24 hours 0.44 0.090 40 13 1.491
48 hours 0.55 0.303 40 1 0.869
Protein NOV homologs:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.55 0.102 126 9 0.602
24 hours 0.49 0.075 126 17 1.062
48 hours 0.62 0.175 126 3 0.483
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.93 0.128 157 2 0.001
24 hours 0.77 0.125 157 5 0.028
48 hours 0.82 0.185 157 2 0.088
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.53 0.102 102 9 0.786
24 hours 0.41 0.075 102 15 1.792
48 hours 0.55 0.212 102 2 0.809
Nerve growth factor 4:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.67 0.103 80 9 0.099
24 hours 0.67 0.152 80 4 0.258
48 hours 0.72 0.208 80 2 0.285
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.80 0.190 98 2 0.113
24 hours 0.89 0.154 98 2 0.012
48 hours 0.69 0.211 98 2 0.372
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.71 0.102 62 9 0.041
24 hours 0.51 0.210 62 2 0.969
48 hours 0.73 0.291 62 1 0.421
α -1-antitrypsin:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.36 0.054 356 23 1.991
24 hours 0.28 0.045 356 25 2.000
48 hours 0.24 0.054 356 13 2.000
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.43 0.111 441 6 1.494
24 hours 0.43 0.104 441 7 1.480
48 hours 0.46 0.126 441 5 1.265
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.39 0.058 293 22 1.954
24 hours 0.27 0.045 293 24 2.000
48 hours 0.17 0.042 293 13 2.000
Leukocyte elastase:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.63 0.075 176 17 0.081
24 hours 0.57 0.072 176 19 0.296
48 hours 0.62 0.086 176 13 0.152
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.94 0.094 230 3 0.000
24 hours 0.61 0.136 230 5 0.417
48 hours 0.69 0.133 230 5 0.155
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.57 0.076 154 17 0.333
24 hours 0.56 0.072 154 19 0.410
48 hours 0.60 0.089 154 12 0.269
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.83 0.113 143 5 0.003
24 hours 0.61 0.076 143 17 0.136
48 hours 0.60 0.136 143 5 0.476
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.90 0.149 178 2 0.008
24 hours 0.72 0.131 178 5 0.093
48 hours 0.58 0.213 178 2 0.721
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.84 0.125 111 4 0.007
24 hours 0.55 0.081 111 15 0.530
48 hours 0.59 0.153 111 4 0.535
Soluble tumor necrosis factor ligand superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.26 0.094 109 5 1.990
24 hours 0.53 0.115 109 7 0.763
48 hours 0.56 0.152 109 4 0.672
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.35 0.174 132 2 1.623
24 hours 0.46 0.164 132 3 1.213
48 hours 0.29 0.154 132 2 1.831
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.19 0.084 81 4 2.000
24 hours 0.45 0.129 81 5 1.320
48 hours 0.56 0.175 81 3 0.734
Soluble intercellular adhesion molecule 2:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.60 0.106 60 9 0.365
24 hours 0.38 0.134 60 4 1.632
48 hours 0.41 0.193 60 2 1.365
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.40 0.189 79 2 1.407
24 hours 0.14 0.091 79 2 2.000
48 hours 0.53 0.212 79 2 0.881
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.59 0.108 45 9 0.419
24 hours 0.59 0.218 45 2 0.683
48 hours 0.62 0.306 45 1 0.689
Heat shock protein β -1:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.30 0.080 82 9 1.989
24 hours 0.42 0.140 82 4 1.415
48 hours 0.26 0.147 82 2 1.895
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.51 0.208 101 2 0.962
24 hours 0.53 0.211 101 2 0.870
48 hours 0.70 0.210 101 2 0.333
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.28 0.079 64 9 1.995
24 hours 0.32 0.168 64 2 1.714
48 hours 0.14 0.129 64 1 1.995
Soluble epidermal growth factor receptor:
first group v second group, determination of serum creatinine measurement or urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.60 0.119 26 8 0.398
24 hours 0.58 0.091 26 17 0.369
48 hours nd nd 26 0 0.211
First group v second group, determination of serum creatinine
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.31 0.167 47 2 1.749
24 hours 0.48 0.105 47 9 1.188
48 hours 0.00 0.000 47 1 n/a
The first group v and the second group, determining the urine output
Time before Max period AUC SE nFirst group nSecond group p
0 hour 0.67 0.123 27 7 0.176
24 hours 0.73 0.097 27 11 0.019
48 hours 0.63 0.309 27 1 0.675
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
Soluble p-selectin:
sCr or UO
sCr only
UO only
Protein NOV homologs:
sCr or UO
sCr only
UO only
Nerve growth factor 4:
sCr or UO
sCr only
UO only
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor ligand superfamily member 6:
sCr or UO
sCr only
UO only
Soluble intercellular adhesion molecule 2:
sCr or UO
sCr only
UO only
Heat shock protein β -1:
sCr or UO
sCr only
UO only
Soluble epidermal growth factor receptor:
sCr or UO
sCr only
UO only
Example 11 evaluation of renal injury markers for renal status in patients progressing from stage R to stages I and F
Patients were classified and analyzed as described in example 9, but only those patients in the arrival period R were included in this example. The first population included patients who reached stage R but did not develop to stage I or F within 10 days, and the second population included only patients who developed to stage I or F. The concentration of marker in the plasma component of the blood sample collected at 12 hours within the arrival period R was included in the analysis for both the first population and the second population.
The following descriptive statistics were obtained:
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
In the table below, the ability to distinguish between the first population (subjects who remained RIFLE R) and the second population (subjects who developed RIFLE I or F) was determined using ROC analysis.
α -1-antitrypsin:
First group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.38 0.088 28 15 1.842
24 hours 0.38 0.088 28 15 1.842
48 hours 0.38 0.088 28 15 1.842
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.43 0.154 12 5 1.336
24 hours 0.43 0.154 12 5 1.336
48 hours 0.43 0.154 12 5 1.336
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.43 0.100 22 13 1.538
24 hours 0.43 0.100 22 13 1.538
48 hours 0.43 0.100 22 13 1.538
Leukocyte elastase:
First group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.64 0.098 25 13 0.163
24 hours 0.64 0.098 25 13 0.163
48 hours 0.64 0.098 25 13 0.163
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.43 0.171 10 4 1.339
24 hours 0.43 0.171 10 4 1.339
48 hours 0.43 0.171 10 4 1.339
The first group v and the second group, determining the urine output
Before max phaseTime of day AUC SE nFirst group nSecond group p
0 hour 0.79 0.090 18 12 0.001
24 hours 0.79 0.090 18 12 0.001
48 hours 0.79 0.090 18 12 0.001
Soluble tumor necrosis factor receptor superfamily member 6:
first group v second group, determination of serum creatinine measurement or urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.39 0.124 10 12 1.619
24 hours 0.39 0.124 10 12 1.619
48 hours 0.39 0.124 10 12 1.619
First group v second group, determination of serum creatinine
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.88 0.185 4 2 0.043
24 hours 0.88 0.185 4 2 0.043
48 hours 0.88 0.185 4 2 0.043
The first group v and the second group, determining the urine output
Time before max phase AUC SE nFirst group nSecond group p
0 hour 0.38 0.132 9 10 1.646
24 hours 0.38 0.132 9 10 1.646
48 hours 0.38 0.132 9 10 1.646
Various threshold (or "cutoff") concentrations were selected and the relative sensitivity and specificity used to distinguish the first population from the second population is shown in the table below. OR is the odd ratio calculated for a particular cut-off concentration, and 95% CI is the confidence interval for the odd ratio.
α -1-antitrypsin:
sCr or UO
sCr only
UO only
Leukocyte elastase:
sCr or UO
sCr only
UO only
Soluble tumor necrosis factor receptor superfamily member 6:
sCr or UO
sCr only
UO only
While the invention has been described or illustrated in sufficient detail to enable those skilled in the art to make and use it, various alterations, changes, and modifications should be apparent without departing from the spirit and scope of the invention. The examples provided herein represent preferred embodiments, which are illustrative and not intended to limit the scope of the invention. Variations thereof and other uses will occur to those skilled in the art. Such variations are included within the spirit of the invention and are defined by the claims.
Various substitutions and alterations will become apparent to those skilled in the art without departing from the spirit and scope of the invention.
All patents and publications mentioned in this specification are indicative of the levels of those of ordinary skill in the art. All patents and publications are herein incorporated by reference to the same extent as if each individual publication was individually and individually indicated to be incorporated by reference.
The invention illustratively described herein suitably may be practiced in the absence of any element or elements, limitation or limitations. Thus, for example, the terms "comprising," "including," "substantially comprising," and "constituting" in each instance herein may be substituted with two other terms. The terms and expressions which have been employed are used as terms of description and not of limitation, and there is no intention in the use of such terms and expressions of excluding any equivalents of the features shown and described or portions thereof, it being recognized that various modifications are possible within the scope of the invention claimed. Thus, it should be understood that although the present invention has been specifically disclosed by preferred embodiments and optional features, modification and variation of the concepts herein disclosed may be resorted to by those skilled in the art, and that such modifications and variations are considered to be within the scope of this invention as defined by the appended claims.
Other embodiments are within the scope of the following claims.

Claims (27)

1. Use of an agent for performing one or more assays in the manufacture of a diagnostic agent for assessing renal status of a subject, wherein:
the assay is configured to detect the renal injury marker leukocyte elastase in a bodily fluid sample obtained from the subject or to detect the renal injury marker leukocyte elastase and one or more additional renal injury markers in a bodily fluid sample obtained from the subject to provide one or more assay results, and the assay results are correlated with the renal status of the subject,
the one or more additional markers of renal injury are selected from the group consisting of soluble p-selectin, a protein homologous to protein NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 and soluble platelet endothelial adhesion molecule,
wherein the correlating step comprises assigning the likelihood of one or more future changes in renal status to the subject based on the analysis; and is
Wherein the one or more future changes in renal status comprise future Acute Renal Failure (ARF) within 48 hours of the time at which the body fluid sample is obtained from the subject.
2. The use of claim 1, wherein said correlating step comprises correlating the assay results with one or more of risk stratification, diagnosis, status, prognosis, classification and monitoring the renal status of the subject.
3. The use of claim 1, wherein the analysis results comprise the following (vii) or one or more of the following (vii) and (i) - (vi) and (viii) - (xiii):
(i) the concentration of soluble p-selectin measured;
(ii) the concentration of the protein NOV homologous protein measured;
(iii) measured concentration of soluble epidermal growth factor receptor;
(iv) measured nerve growth factor-4 concentration;
(v) the measured concentration of haptoglobin;
(vi) measured concentrations of α -1-antitrypsin;
(vii) the measured concentration of leukocyte elastin;
(viii) (ii) the measured concentration of soluble tumor necrosis factor receptor superfamily member 6;
(ix) (ii) the measured concentration of soluble tumor necrosis factor ligand superfamily member 6;
(x) The measured concentration of heat shock protein β -1;
(xi) The concentration of soluble intercellular adhesion molecule 2 measured;
(xii) The measured concentration of active caspase-3;
(xiii) Measured concentration of soluble platelet endothelial cell adhesion molecule;
and the correlating step for each analysis result comprises comparing the measured concentration with a threshold concentration, an
For a positive going marker, when the measured concentration is above the threshold, the subject will have an injury to renal function in the future, reduced renal function in the future, increased likelihood of future ARF or improvement in renal function relative to the likelihood that the measured concentration is below the threshold, or when the measured concentration is below the threshold, the corresponding subject will have an injury to renal function in the future, reduced likelihood of future ARF or improvement in renal function in the future, relative to the likelihood that the measured concentration is above the threshold, or
For a negative going marker, a subject will have an injury to renal function in the future, a decrease in renal function in the future, an increase in the likelihood of ARF or improvement in renal function in the future when the measured concentration is below the threshold, relative to the likelihood that the concentration should be measured above the threshold or when the measured concentration is above the threshold, the corresponding subject will have an injury to renal function in the future, a decrease in renal function in the future, an decrease in ARF or improvement in renal function in the future, relative to the corresponding likelihood when the measured concentration is below the threshold.
4. The use of claim 1, wherein the one or more future changes in renal status comprise a clinical outcome associated with a subject having a renal injury.
5. The use of claim 1, wherein the analysis results comprise the following (vii) or the following (vii) and one or more of (i) - (vi) and (viii) - (xiii):
(i) the concentration of soluble p-selectin measured;
(ii) the concentration of the protein NOV homologous protein measured;
(iii) measured concentration of soluble epidermal growth factor receptor;
(iv) measured nerve growth factor-4 concentration;
(v) the measured concentration of haptoglobin;
(vi) measured concentrations of α -1-antitrypsin;
(vii) the measured concentration of leukocyte elastin;
(viii) (ii) the measured concentration of soluble tumor necrosis factor receptor superfamily member 6;
(ix) (ii) the measured concentration of soluble tumor necrosis factor ligand superfamily member 6;
(x) The measured concentration of heat shock protein β -1;
(xi) The concentration of soluble intercellular adhesion molecule 2 measured;
(xii) The measured concentration of active caspase-3;
(xiii) Measured concentration of soluble platelet endothelial cell adhesion molecule;
and the correlating step for each analysis result comprises comparing the measured concentration with a threshold concentration, an
For a positive marker, when the measured concentration is above the threshold, the subject has a subsequent acute kidney injury, a worsening stage of AKI status, a death, a need for renal replacement therapy, a need for withdrawal of a nephrotoxin, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic renal disease that is increased, a decreased likelihood of a subsequent acute kidney injury, worsening stage of AKI status, a death, a need for withdrawal of a nephrotoxin, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic renal disease, relative to the likelihood that the measured concentration is below the threshold, or a corresponding subject has a subsequent acute kidney injury, worsening stage of AKI status, a death, a need for renal replacement therapy, a need for withdrawal of a nephrotoxin, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic renal disease, relative to the likelihood that
For a negative going marker, when the measured concentration is below the threshold, the subject has a decreased likelihood of subsequent acute kidney injury, worsening AKI status, death, need for renal replacement therapy, need for withdrawal of nephrotoxins, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic kidney disease relative to the likelihood that the corresponding subject should have a measured concentration above the threshold or when the measured concentration is above the threshold, the corresponding subject has a decreased likelihood of subsequent acute kidney injury, worsening AKI status, death, need for renal replacement therapy, need for withdrawal of nephrotoxins, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic kidney disease relative to the likelihood that the corresponding measured concentration is below the threshold.
6. Use according to claim 1, wherein the likelihood of one or more future changes in renal status is a related event that may occur more or less within a time period selected from the group consisting of: 48 hours, 36 hours, 24 hours and 12 hours.
7. A use according to claim 1, wherein the subject is selected for evaluation of renal status based on the pre-existence in the subject of one or more known risk factors for prerenal, intrinsic renal, or postrenal ARF.
8. The use of claim 1, wherein the subject is selected for evaluation based on a diagnosis of the presence of one or more of the following diseases: congestive heart failure, proteinuria, renal insufficiency, glomerular filtration below the normal range, liver cirrhosis, serum creatinine above the normal range, injury to renal function, reduced renal function or ARF, or selecting subjects for evaluation based on the following undergoing or having undergone surgery: major vascular surgery, coronary artery bypass, or cardiovascular surgery thereof, or selecting a subject for evaluation based on exposure to NSAIDs, cyclophosphamide, tacrolimus, aminoglycosides, foscarnet, ethylene glycol, heme, myoglobin, ifosfamide, heavy metals, methotrexate, radiopaque contrast agents, or streptozotocin.
9. A use according to claim 1, wherein said correlating step comprises assigning a diagnosis of the occurrence or nonoccurrence of one or more of an injury to renal function, reduced renal function, or ARF to the subject based on the assay result.
10. The use of claim 9, wherein the analysis results comprise the following (vii) or one or more of the following (vii) and (i) - (vi) and (viii) - (xiii):
(i) the concentration of soluble p-selectin measured;
(ii) the concentration of the protein NOV homologous protein measured;
(iii) measured concentration of soluble epidermal growth factor receptor;
(iv) measured nerve growth factor-4 concentration;
(v) the measured concentration of haptoglobin;
(vi) measured concentrations of α -1-antitrypsin;
(vii) the measured concentration of leukocyte elastin;
(viii) (ii) the measured concentration of soluble tumor necrosis factor receptor superfamily member 6;
(ix) (ii) the measured concentration of soluble tumor necrosis factor ligand superfamily member 6;
(x) The measured concentration of heat shock protein β -1;
(xi) The concentration of soluble intercellular adhesion molecule 2 measured;
(xii) The measured concentration of active caspase-3;
(xiii) Measured concentration of soluble platelet endothelial cell adhesion molecule;
and the correlating step for each analysis result comprises comparing the measured concentration with a threshold concentration, an
For a positive going marker, when the measured concentration is above the threshold, the subject will have an injury to renal function in the future, reduced renal function in the future, increased likelihood of future ARF or improvement in renal function relative to the likelihood that the measured concentration is below the threshold, or when the measured concentration is below the threshold, the corresponding subject will have an injury to renal function in the future, reduced likelihood of future ARF or improvement in renal function in the future, relative to the likelihood that the measured concentration is above the threshold, or
For a negative going marker, a subject will have an injury to renal function in the future, a decrease in renal function in the future, an increase in the likelihood of ARF or improvement in renal function in the future when the measured concentration is below the threshold, relative to the likelihood that the concentration should be measured above the threshold or when the measured concentration is above the threshold, the corresponding subject will have an injury to renal function in the future, a decrease in renal function in the future, an decrease in ARF or improvement in renal function in the future, relative to the corresponding likelihood when the measured concentration is below the threshold.
11. A use according to claim 1, wherein said correlating step comprises assessing whether renal function is worsening or improving in a subject having an injury to renal function, reduced renal function, or ARF based on the assay result.
12. The use of claim 11, wherein the analysis results comprise the following (vii) or the following (vii) and one or more of (i) - (vi) and (viii) - (xiii):
(i) the concentration of soluble p-selectin measured;
(ii) the concentration of the protein NOV homologous protein measured;
(iii) measured concentration of soluble epidermal growth factor receptor;
(iv) measured nerve growth factor-4 concentration;
(v) the measured concentration of haptoglobin;
(vi) measured concentrations of α -1-antitrypsin;
(vii) the measured concentration of leukocyte elastin;
(viii) (ii) the measured concentration of soluble tumor necrosis factor receptor superfamily member 6;
(ix) (ii) the measured concentration of soluble tumor necrosis factor ligand superfamily member 6;
(x) The measured concentration of heat shock protein β -1;
(xi) The concentration of soluble intercellular adhesion molecule 2 measured;
(xii) The measured concentration of active caspase-3;
(xiii) Measured concentration of soluble platelet endothelial cell adhesion molecule;
and the correlating step for each analysis result comprises comparing the measured concentration with a threshold concentration, an
For a positive marker, when the measured concentration is above the threshold, the renal function of the subject is worsening, or when the measured concentration is below the threshold, the renal function of the subject is improving, or
For a negative going marker, a measured concentration below a threshold corresponds to a worsening renal function in the subject, or a measured concentration above a threshold corresponds to an improvement in renal function in the subject.
13. A use according to claim 1, wherein said assessment is a diagnosis of whether said subject has suffered an injury to renal function.
14. A use according to claim 1, wherein said assessment is a diagnosis of whether said subject has reduced renal function.
15. The use of claim 1, wherein said assessment is a diagnosis of whether said subject has developed acute renal failure.
16. The use of claim 1, wherein said assessment is a diagnosis of whether said subject is in need of renal replacement therapy.
17. The use of claim 1, wherein said assessment is a diagnosis of whether said subject requires kidney transplantation.
18. A use according to claim 1, wherein said assessment is determining whether said subject is at risk of developing an injury to renal function in the future.
19. A use according to claim 1, wherein said assessment is a determination of whether said subject is at risk of developing a future decrease in renal function.
20. A use according to claim 1, wherein said assessment is the determination of whether the subject is at risk of developing acute renal failure in the future.
21. The use of claim 1, wherein said assessing is carried out to determine whether said subject is at risk for developing a future renal replacement therapy.
22. A use according to claim 1, wherein said assessment is the determination of whether the subject is at risk of developing a future renal transplant need.
23. The use of claim 3, wherein the one or more future changes in renal status comprise future Acute Renal Failure (ARF) within 24 hours of obtaining the body fluid sample.
24. Use of an agent for the detection of the kidney injury marker leukocyte elastase or the detection of leukocyte elastase and one or more additional kidney injury markers selected from the group consisting of soluble p-selectin, a homologous protein to protein NOV, soluble epidermal growth factor receptor, nerve growth factor-4, haptoglobin, heat shock protein β -1, α -1-antitrypsin, soluble tumor necrosis factor receptor superfamily member 6, soluble tumor necrosis factor ligand superfamily member 6, soluble intercellular adhesion molecule 2, caspase-3 and soluble platelet endothelial adhesion molecule for the preparation of a diagnostic agent for the assessment of future acute kidney injury.
25. A use according to claim 5, wherein the increased or decreased likelihood of subsequent acute kidney injury, worsening AKI status, mortality, need for renal replacement therapy, need for withdrawal of renal toxins, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic kidney disease assigned to the subject is a likelihood that an event of interest is more or less likely to occur within 30 days of the time at which the body fluid sample is obtained from the subject.
26. A use according to claim 5, wherein the increased or decreased likelihood of subsequent acute kidney injury, worsening AKI status, mortality, need for renal replacement therapy, need for withdrawal of renal toxins, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic kidney disease assigned to the subject is a likelihood that an event of interest is more or less likely to occur within 72 hours of the time at which the body fluid sample is obtained from the subject.
27. A use according to claim 5, wherein the increased or decreased likelihood of subsequent acute kidney injury, worsening AKI status, mortality, need for renal replacement therapy, need for withdrawal of renal toxins, end stage renal disease, heart failure, stroke, myocardial infarction, or chronic kidney disease assigned to the subject is a likelihood that an event of interest is more or less likely to occur within 24 hours of the time at which the body fluid sample is obtained from the subject.
HK16101184.6A 2008-08-28 2016-02-02 Methods and compositions for diagnosis and prognosis of renal injury and renal failure HK1213320B (en)

Applications Claiming Priority (26)

Application Number Priority Date Filing Date Title
US9273308P 2008-08-28 2008-08-28
US61/092,733 2008-08-28
US9315408P 2008-08-29 2008-08-29
US9292608P 2008-08-29 2008-08-29
US9327208P 2008-08-29 2008-08-29
US9290508P 2008-08-29 2008-08-29
US9326308P 2008-08-29 2008-08-29
US9326408P 2008-08-29 2008-08-29
US9324908P 2008-08-29 2008-08-29
US9326608P 2008-08-29 2008-08-29
US9324708P 2008-08-29 2008-08-29
US9326208P 2008-08-29 2008-08-29
US9324408P 2008-08-29 2008-08-29
US9291208P 2008-08-29 2008-08-29
US61/093,244 2008-08-29
US61/093,272 2008-08-29
US61/093,247 2008-08-29
US61/092,905 2008-08-29
US61/093,266 2008-08-29
US61/092,926 2008-08-29
US61/092,912 2008-08-29
US61/093,262 2008-08-29
US61/093,249 2008-08-29
US61/093,263 2008-08-29
US61/093,264 2008-08-29
US61/093,154 2008-08-29

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