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HK1240277B - One-stop treatment method for breaking nucleic acid by means of transposase, and reagent - Google Patents

One-stop treatment method for breaking nucleic acid by means of transposase, and reagent Download PDF

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HK1240277B
HK1240277B HK17113601.5A HK17113601A HK1240277B HK 1240277 B HK1240277 B HK 1240277B HK 17113601 A HK17113601 A HK 17113601A HK 1240277 B HK1240277 B HK 1240277B
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reagent
transposase
adapter
nucleic acid
pcr
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HK17113601.5A
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HK1240277A1 (en
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耿春雨
郭荣荣
陈若莹
张迎新
安德烈.阿莱克谢耶夫
蒋慧
章文蔚
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深圳华大智造生物电子科技有限公司
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Publication of HK1240277A1 publication Critical patent/HK1240277A1/en
Publication of HK1240277B publication Critical patent/HK1240277B/en

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Description

一种核酸的转座酶打断一站式处理方法及试剂A one-stop treatment method and reagent for nucleic acid transposase disruption

技术领域Technical Field

本发明涉及分子生物学技术领域,尤其涉及一种核酸的转座酶打断一站式处理方法及试剂。The present invention relates to the technical field of molecular biology, and in particular to a one-stop processing method and reagent for transposase disruption of nucleic acid.

背景技术Background Art

自从罗氏发明了焦磷酸测序方法开辟了二代测序以来,直至现在,二代测序经历了一段高速发展期。但随着高通量测序的发展,高通量和低成本的样本制备环节逐渐成了测序领域的一个重点考虑的因素。各种原理的样本处理方法及自动化装置不断被研发出来,主要包括:样本片段化、核酸分子的末端处理及接头连接并最终的出库。Since Roche invented the pyrosequencing method, which pioneered next-generation sequencing (NGS), NGS has experienced rapid growth. However, with the development of high-throughput sequencing, high-throughput and low-cost sample preparation has become a key consideration in the sequencing field. Various sample processing methods and automated devices have been developed, primarily encompassing sample fragmentation, nucleic acid end-processing, adapter ligation, and ultimately, library release.

其中样本片段化主要分为物理方法(如超声剪切)或酶学方法(即非特异的核酸内切酶处理)来实现。其中物理方法以基于专利的自适应聚焦超声(Adaptive FocusedAcoustic,AFA)技术的Covaris为主。在等温的条件下,利用几何聚焦声波能量,通过>400kHz的球面固态超声传感器,将波长为1mm的声波能量聚焦在样品上。该方法确保了核酸样品的完整性得以保留,并能实现高回收率。Covaris的仪器包括经济的M系列、单管全功率的S系列以及更高通量的E和L系列。基于物理方法打断的片段随机性良好,但是通量上也要依赖大量的Covaris打断仪,同时需要后续单独进行末端处理、加接头和PCR以及各种纯化操作。其中酶学方法有一种NEB公司推出的NEB Next dsDNA Fragmentase。该试剂首先在双链DNA产生随机的切刻位点,然后通过另一种酶识别切刻位点来切割互补的DNA链,从而实现打断的目的。这种试剂可以用于基因组DNA、全基因组扩增产物和PCR产物等,随机性也较好,但是会产生一些人工短片段插入和缺失,同时也不可避免的需要后续单独进行末端处理、加接头和PCR以及相应的纯化操作。另外以Epicentra公司(已被Illumina收购)的Nextera试剂盒领衔的转座酶打断试剂盒,利用转座酶同时完成DNA片段化和接头的添加,从而减少样品处理的时间。Sample fragmentation is primarily achieved through physical methods (such as ultrasonic shearing) or enzymatic methods (i.e., non-specific endonuclease treatment). Physical methods primarily utilize Covaris, based on patented Adaptive Focused Acoustic (AFA) technology. Under isothermal conditions, this method utilizes geometrically focused acoustic energy, focusing a 1mm wavelength onto the sample via a spherical solid-state ultrasonic transducer operating at >400kHz. This method preserves the integrity of nucleic acid samples and achieves high recovery rates. Covaris instruments include the economical M series, the single-tube, full-power S series, and the higher-throughput E and L series. While fragmentation based on physical methods offers high randomness, throughput relies on a large number of Covaris fragmentation instruments, requiring subsequent end-treatment, linker addition, PCR, and various purification steps. Enzymatic methods include NEB Next dsDNA Fragmentase, launched by NEB. This reagent first creates random nick sites in double-stranded DNA, then a second enzyme recognizes the nick sites and cleaves the complementary DNA strand, achieving fragmentation. This reagent can be used for genomic DNA, whole-genome amplification products, and PCR products, and has good randomness. However, it can produce some artificial short insertions and deletions, and inevitably requires subsequent end-treatment, adapter addition, PCR, and corresponding purification operations. Transposase fragmentation kits, led by the Nextera kit from Epicentra (acquired by Illumina), utilize transposase to simultaneously fragment DNA and add adapters, thereby reducing sample processing time.

从各种操作的简便性来看,转座酶打断的方式无疑在通量及操作简便性上远远胜过其它方法,但是这种打断方式也有自身的缺点:转座酶包埋在靶序列上会抑制后续的酶反应,虽然相关转座酶试剂盒生产商提供了一些试剂用于低起始量(如5ng起始量基因组DNA)样本的转座酶处理,从而实现打断后无需纯化。但是对于50ng起始量这种需要提高转座酶用量的方法,则需要通过过柱或磁珠纯化的方式将转座酶去除,这无疑加大了实验操作的成本和流程(图1A)。From the perspective of the simplicity of various operations, the transposase shearing method undoubtedly far surpasses other methods in terms of throughput and ease of operation. However, this shearing method also has its own disadvantages: the transposase is embedded in the target sequence and will inhibit subsequent enzymatic reactions. Although the relevant transposase kit manufacturers provide some reagents for transposase treatment of low-input samples (such as 5ng of starting genomic DNA), thus achieving the goal of eliminating the need for purification after shearing. However, for methods that require a higher amount of transposase, such as 50ng starting amount, the transposase needs to be removed by column or magnetic bead purification, which undoubtedly increases the cost and process of experimental operation (Figure 1A).

发明内容Summary of the Invention

本发明提供一种核酸的转座酶打断一站式处理方法及试剂,该方法和试剂能够实现从核酸的转座酶打断到下游的PCR扩增反应的一站式处理,不需要过柱或磁珠纯化,从而简化了实验操作流程并降低实验成本。The present invention provides a one-stop treatment method and reagent for transposase fragmentation of nucleic acids. The method and reagent can achieve one-stop processing from transposase fragmentation of nucleic acids to downstream PCR amplification reaction, without the need for column or magnetic bead purification, thereby simplifying the experimental operation process and reducing experimental costs.

根据本发明的第一方面,本发明提供一种核酸的转座酶打断一站式处理方法,包括如下步骤:According to a first aspect of the present invention, the present invention provides a one-stop method for transposase fragmentation of nucleic acids, comprising the following steps:

使用转座酶包埋复合体对核酸进行随机打断,其中转座酶包埋复合体包含转座酶和含转座酶识别序列的第一接头;Randomly fragmenting the nucleic acid using a transposase-embedded complex, wherein the transposase-embedded complex comprises a transposase and a first adapter comprising a transposase recognition sequence;

加入第一试剂进行处理,打破转座酶与核酸的靶序列的吸附作用;adding a first reagent for treatment to break the adsorption of the transposase to the target sequence of the nucleic acid;

加入第二试剂进行处理,减弱第一试剂对后续酶促反应的影响;Adding a second reagent for treatment reduces the effect of the first reagent on the subsequent enzymatic reaction;

以第二试剂处理后的产物为模板成分进行PCR反应,得到打断的核酸片段两端连接有接头的PCR产物。A PCR reaction is performed using the product treated with the second reagent as a template component to obtain a PCR product with adapters connected to both ends of the interrupted nucleic acid fragment.

在本发明的方法中,采用第一试剂处理转座酶打断核酸后的反应产物,以打破转座酶与核酸的靶序列的吸附作用,替代了传统的流程复杂且成本较高的过柱或磁珠纯化步骤,然后采用第二试剂处理,以减弱第一试剂对后续酶促反应的影响,保证下游的PCR扩增顺利进行。In the method of the present invention, a first reagent is used to treat the reaction product after the transposase breaks the nucleic acid to break the adsorption of the transposase to the target sequence of the nucleic acid, replacing the traditional complex and costly column or magnetic bead purification step. Then, a second reagent is used to reduce the effect of the first reagent on the subsequent enzymatic reaction, ensuring smooth downstream PCR amplification.

作为本发明的优选方案,第一试剂包含蛋白酶溶液、十二烷基硫酸钠(SDS)溶液和NT缓冲液中的一种或多种。这些溶液使得转座酶发生降解或变性而从核酸的靶序列上解脱下来。需要说明的是:第一试剂可以是上述溶液中的一种或多种,其中多种可以是两种或三种,比如蛋白酶溶液和SDS溶液,SDS溶液和NT缓冲液,蛋白酶溶液和NT缓冲液,蛋白酶溶液、SDS溶液和NT缓冲液。其中,NT缓冲液可以采用Truprep试剂盒S5系列中配套的NT缓冲液。As a preferred embodiment of the present invention, the first reagent comprises one or more of a protease solution, a sodium dodecyl sulfate (SDS) solution, and a NT buffer. These solutions degrade or denature the transposase, freeing it from the target nucleic acid sequence. It should be noted that the first reagent can be one or more of the above solutions, wherein the plurality can be two or three, such as a protease solution and an SDS solution, an SDS solution and a NT buffer, a protease solution and a NT buffer, or a protease solution, an SDS solution, and a NT buffer. The NT buffer can be the NT buffer provided with the Truprep kit S5 series.

作为本发明的优选方案,如果第一试剂包含蛋白酶溶液,则加入第一试剂进行处理后,进一步加入乙二胺四乙酸(EDTA)溶液处理。EDTA抑制蛋白酶的活性,防止蛋白酶对后续PCR反应中的酶产生降解作用。As a preferred embodiment of the present invention, if the first reagent contains a protease solution, then after the first reagent is added for treatment, an ethylenediaminetetraacetic acid (EDTA) solution is further added for treatment. EDTA inhibits the activity of the protease, preventing the protease from degrading the enzyme in the subsequent PCR reaction.

作为本发明的优选方案,第二试剂包含Triton-X100溶液。Triton-X100又称曲拉通X-100,化学名为辛基苯基聚氧乙烯醚,作为非离子型表面活性剂,在本发明中的作用是减弱第一试剂对后续酶促反应的影响。As a preferred embodiment of the present invention, the second reagent comprises a Triton-X100 solution. Triton-X100, also known as Triton X-100 and chemically known as octylphenyl polyoxyethylene ether, is a nonionic surfactant used in the present invention to reduce the effect of the first reagent on the subsequent enzymatic reaction.

作为本发明的优选方案,如果第一试剂包含SDS溶液,则第二试剂还包含吐温-20溶液。吐温-20的加入能够进一步减弱SDS对后续酶促反应的影响,提升PCR效果。需要说明的是:吐温-20可以以与Triton-X100混合的形式作为第二试剂使用;也可以以与Triton-X100分离的形式单独提供,在这种情况下第二试剂指Triton-X100溶液和吐温-20溶液。应当理解,本发明中第一试剂和第二试剂并不限定指单一的对象,也可以指多个对象的组合。并且,本发明中,任何情况下使用的“第一”和“第二”等概念都不应当理解为具有顺序和技术的含义,其作用仅在于将其与其它对象区别开来。As a preferred embodiment of the present invention, if the first reagent contains an SDS solution, the second reagent also contains a Tween-20 solution. The addition of Tween-20 can further reduce the effect of SDS on subsequent enzymatic reactions and improve the PCR effect. It should be noted that Tween-20 can be used as a second reagent in the form of a mixture with Triton-X100; it can also be provided separately in the form of separation from Triton-X100. In this case, the second reagent refers to Triton-X100 solution and Tween-20 solution. It should be understood that the first reagent and the second reagent in the present invention are not limited to a single object, but may also refer to a combination of multiple objects. Moreover, in the present invention, the concepts of "first" and "second" used in any case should not be understood as having sequential and technical meanings, and their function is only to distinguish them from other objects.

作为本发明的优选方案,在加入第二试剂进行处理之后并且在进行PCR反应之前还包括:通过连接酶在缺口处连接上第二接头,其中缺口是在打断的核酸两端连接第一接头后形成的9bp碱基缺失。第二接头的加入,使得通过使用分别靶向结合第一接头的引物和靶向结合第二接头的引物进行PCR时,能够得到两端带有不同接头序列的PCR产物,从而打断后的核酸片段的应用不再受限于两侧共有转座酶识别序列的影响。第二接头的序列不受限制,可以是任何序列。As a preferred embodiment of the present invention, after adding the second reagent for treatment and before conducting the PCR reaction, the method further includes: ligating a second adapter at the gap using a ligase, wherein the gap is a 9-bp base deletion formed after ligating the first adapter at both ends of the fragmented nucleic acid. The addition of the second adapter enables PCR using primers that target the first adapter and primers that target the second adapter, respectively, to produce PCR products with different adapter sequences at both ends. This eliminates the need for the fragmented nucleic acid fragments to be used due to the shared transposase recognition sequence on both sides. The sequence of the second adapter is not limited and can be any sequence.

作为本发明的优选方案,第二接头的3’端为双脱氧核苷酸,以防止第二接头与第一接头互连。As a preferred embodiment of the present invention, the 3' end of the second linker is a dideoxynucleotide to prevent the second linker from interconnecting with the first linker.

根据本发明的第二方面,本发明提供一种核酸的转座酶打断一站式处理试剂,包括如下组成部分:According to a second aspect of the present invention, the present invention provides a one-stop treatment reagent for transposase fragmentation of nucleic acids, comprising the following components:

第一试剂,包含蛋白酶溶液、SDS溶液和NT缓冲液中的一种或多种,用于打破转座酶与核酸的靶序列的吸附作用;A first reagent comprising one or more of a protease solution, an SDS solution, and an NT buffer, for breaking the adsorption of the transposase to the target sequence of the nucleic acid;

第二试剂,包含Triton-X100溶液,用于减弱第一试剂对后续酶促反应的影响。The second reagent, comprising Triton-X100 solution, is used to reduce the effect of the first reagent on the subsequent enzymatic reaction.

需要说明的是:第一试剂可以是蛋白酶溶液、SDS溶液和NT缓冲液中的一种或多种,其中多种可以是两种或三种,比如蛋白酶溶液和SDS溶液,SDS溶液和NT缓冲液,蛋白酶溶液和NT缓冲液,蛋白酶溶液、SDS溶液和NT缓冲液。其中,NT缓冲液可以采用Truprep试剂盒S5系列中配套的NT缓冲液。It should be noted that the first reagent can be one or more of a protease solution, an SDS solution, and a NT buffer. The multiple reagents can be two or three, such as a protease solution and an SDS solution, an SDS solution and a NT buffer, a protease solution and a NT buffer, or a protease solution, an SDS solution, and a NT buffer. The NT buffer can be the NT buffer provided with the Truprep kit S5 series.

作为本发明的优选方案,如果第一试剂包括蛋白酶溶液,则第一试剂还包括含有EDTA的附加试剂。EDTA抑制蛋白酶的活性,防止蛋白酶对后续PCR反应中的酶产生降解作用。含有EDTA的附加试剂作为第一试剂的组成部分,与蛋白酶溶液分开单独提供。As a preferred embodiment of the present invention, if the first reagent includes a protease solution, the first reagent also includes an additional reagent containing EDTA. EDTA inhibits the activity of the protease, preventing the protease from degrading the enzyme in the subsequent PCR reaction. The additional reagent containing EDTA is provided separately from the protease solution as a component of the first reagent.

作为本发明的优选方案,如果第一试剂包括SDS溶液,则第二试剂还包含吐温-20溶液。吐温-20可以以与Triton-X100混合的形式作为第二试剂提供;也可以以与Triton-X100分离的形式单独提供。As a preferred embodiment of the present invention, if the first reagent includes an SDS solution, the second reagent further includes a Tween-20 solution. Tween-20 can be provided as the second reagent in a mixed form with Triton-X100, or can be provided separately from Triton-X100.

作为本发明的优选方案,试剂还包括:转座酶和含转座酶识别序列的第一接头,用于形成转座酶包埋复合体以对核酸进行随机打断。As a preferred embodiment of the present invention, the reagent further comprises: a transposase and a first linker containing a transposase recognition sequence, which is used to form a transposase-embedded complex to randomly fragment the nucleic acid.

作为本发明的优选方案,试剂还包括PCR组分,用于以第二试剂处理后的产物为模板成分进行PCR反应。其中,PCR组分公知地包括DNA聚合酶、PCR缓冲液、dNTPs、Mg2+溶液和引物等。As a preferred embodiment of the present invention, the reagent further comprises a PCR component for performing a PCR reaction using the product treated with the second reagent as a template component. PCR components generally include DNA polymerase, PCR buffer, dNTPs, Mg2 + solution, and primers.

作为本发明的优选方案,试剂还包括第二接头组分,用于连入打断的核酸两端连接第一接头后形成的缺口处。As a preferred embodiment of the present invention, the reagent further comprises a second linker component for connecting to the gap formed after the two ends of the interrupted nucleic acid are connected to the first linker.

作为本发明的优选方案,试剂还包括连接酶组分,用于在打断的核酸两端连接第一接头后形成的缺口处连接上第二接头。As a preferred embodiment of the present invention, the reagent further comprises a ligase component for connecting a second linker to the gap formed after the two ends of the broken nucleic acid are connected to the first linker.

本发明中,待打断的核酸可以是基因组DNA、全基因组扩增产物或PCR产物,可以是DNA或cDNA,并且对于核酸的来源没有限制,可以是动物、植物或微生物来源的核酸样品。In the present invention, the nucleic acid to be interrupted can be genomic DNA, whole genome amplification product or PCR product, can be DNA or cDNA, and there is no limitation on the source of the nucleic acid, which can be a nucleic acid sample of animal, plant or microbial origin.

本发明中,第一试剂和第二试剂的工作浓度,可由本领域技术人员根据经验确定。一般地,在第一试剂中,蛋白酶的工作浓度以50~5000mAU/mL为佳,优选75~3750mAU/mL,最优选1500mAU/mL;EDTA的工作浓度以1~50mmol/L为佳,优选14mmol/L;SDS的工作浓度以0.01%~1.5%(体积比)为佳,优选1%(体积比);NT缓冲液的终浓度按照1×使用即可。在第二试剂中,Triton-X100的工作浓度以0.1%~2%(体积比)为佳,优选1%(体积比);吐温-20的工作浓度以0.1%~2%(体积比)为佳,优选0.5%(体积比)。In the present invention, the working concentrations of the first and second reagents can be determined empirically by those skilled in the art. Generally, in the first reagent, the working concentration of protease is preferably 50-5000 mAU/mL, preferably 75-3750 mAU/mL, and most preferably 1500 mAU/mL; the working concentration of EDTA is preferably 1-50 mmol/L, preferably 14 mmol/L; the working concentration of SDS is preferably 0.01%-1.5% (volume ratio), preferably 1% (volume ratio); and the final concentration of NT buffer can be 1x. In the second reagent, the working concentration of Triton-X100 is preferably 0.1%-2% (volume ratio), preferably 1% (volume ratio); and the working concentration of Tween-20 is preferably 0.1%-2% (volume ratio), preferably 0.5% (volume ratio).

本发明的方法采用第一试剂和第二试剂对转座酶打断核酸后的产物进行处理,代替传统的过柱或磁珠纯化,从而实现从核酸的转座酶打断到下游的PCR扩增反应的一站式处理,整个过程在单管内进行,简化了实验操作流程并降低实验成本,缩短处理周期,从而使得高通量的样本处理成为可能。The method of the present invention uses a first reagent and a second reagent to process the product of nucleic acid fragmentation by transposase, replacing traditional column or magnetic bead purification, thereby achieving a one-stop processing from transposase fragmentation of nucleic acid to downstream PCR amplification reaction. The entire process is carried out in a single tube, which simplifies the experimental operation process, reduces experimental costs, shortens the processing cycle, and thus makes high-throughput sample processing possible.

附图说明BRIEF DESCRIPTION OF THE DRAWINGS

图1为传统的转座酶试剂盒打断到PCR反应的操作流程示意图(A)、本发明的无需纯化一站式反应的操作流程示意图(B)和本发明的对应于二号接头引入方案优化的无需纯化一站式反应的操作流程示意图(C)。Figure 1 is a schematic diagram of the operational flow of a conventional transposase kit from fragmentation to PCR reaction (A), a schematic diagram of the operational flow of the purification-free one-stop reaction of the present invention (B), and a schematic diagram of the operational flow of the purification-free one-stop reaction optimized for the second adapter introduction scheme of the present invention (C).

图2为本发明实施例1的一号接头双接头转座酶复合体的PCR产物电泳检测结果,其中D2000为DNA Ladder泳道;泳道1为1×PBI,1.3×Ampure XP beads纯化处理结果;泳道2为2μL蛋白酶+14mM EDTA+1%Triton-X100处理结果;泳道3为1%SDS+1%Triton-X100+0.5%吐温-20处理结果;泳道4为NT缓冲液+1%Triton-X100处理结果;泳道5为2μL蛋白酶+1%Triton-X100处理结果。Figure 2 shows the electrophoresis detection results of the PCR products of the No. 1 adapter double adapter transposase complex of Example 1 of the present invention, wherein D2000 is the DNA Ladder lane; lane 1 is the purification result of 1×PBI and 1.3×Ampure XP beads; lane 2 is the result of treatment with 2 μL protease + 14 mM EDTA + 1% Triton-X100; lane 3 is the result of treatment with 1% SDS + 1% Triton-X100 + 0.5% Tween-20; lane 4 is the result of treatment with NT buffer + 1% Triton-X100; and lane 5 is the result of treatment with 2 μL protease + 1% Triton-X100.

图3为本发明实施例2的一号接头单接头转座酶复合体的PCR产物电泳检测结果,其中D2000为DNA Ladder泳道;泳道1为2μL蛋白酶+1%Triton-X100处理结果;泳道2为NT缓冲液+1%Triton-X100处理结果;泳道3为1%SDS+1%Triton-X100+0.5%吐温-20处理结果;泳道4为2μL蛋白酶+14mM EDTA+1%Triton-X100处理结果;泳道5为1×PBI,1.3×Ampure XP beads+1%Triton-X100处理结果;泳道6为阴性对照(未加模板)结果。Figure 3 shows the electrophoresis detection results of the PCR products of the No. 1 adapter single adapter transposase complex of Example 2 of the present invention, wherein D2000 is the DNA ladder lane; lane 1 shows the results of treatment with 2 μL protease + 1% Triton-X100; lane 2 shows the results of treatment with NT buffer + 1% Triton-X100; lane 3 shows the results of treatment with 1% SDS + 1% Triton-X100 + 0.5% Tween-20; lane 4 shows the results of treatment with 2 μL protease + 14 mM EDTA + 1% Triton-X100; lane 5 shows the results of treatment with 1×PBI, 1.3×Ampure XP beads + 1% Triton-X100; and lane 6 shows the results of the negative control (no template added).

具体实施方式DETAILED DESCRIPTION

下面通过具体实施例对本发明作进一步详细说明。除非特别说明,下面实施例中所使用的技术均为本领域内的技术人员已知的常规技术;所使用的仪器设备和试剂等,均为本领域内的技术人员可以通过公共途径如商购等获得的。The present invention is further described in detail below by means of specific examples. Unless otherwise specified, the techniques used in the following examples are conventional techniques known to those skilled in the art; the instruments, equipment, and reagents used are all available to those skilled in the art through public channels, such as commercial purchases.

请参考图1B,本发明的无需纯化一站式反应的操作流程主要包括:(1)利用转座酶包埋特定修饰序列(含转座酶识别序列)的一号接头(本发明中其它地方称为第一接头)于对基因组序列、全基因组扩增序列或PCR产物序列等核酸序列进行随机打断;(2)通过蛋白酶或其它特定比例的一号试剂(本发明中其它地方称为第一试剂)处理,打破转座酶和靶序列的吸附作用实现无纯化操作;(3)向上一步反应的产物中加入二号试剂(本发明中其它地方称为第二试剂),以减弱一号试剂对于后续酶促反应的影响;(4)无需纯化直接进行特殊引物(引物靶向结合一号接头,一号接头包括两个接头部分,每个接头部分含有共同的转座酶识别序列和彼此不同的其它序列)介导的PCR反应,从而得到靶序列两端连接有除转座酶识别序列之外完全不同序列的PCR产物,这种产物可以用于后续的分子生物学实验。Referring to FIG1B , the operational flow of the one-stop reaction without purification of the present invention mainly includes: (1) using a No. 1 linker (referred to as the first linker elsewhere in the present invention) embedded with a specific modification sequence (including a transposase recognition sequence) of a transposase to randomly interrupt a nucleic acid sequence such as a genomic sequence, a whole genome amplification sequence or a PCR product sequence; (2) treating the No. 1 reagent (referred to as the first reagent elsewhere in the present invention) with a protease or other specific ratio to break the adsorption effect between the transposase and the target sequence to achieve a purification-free operation; (3) adding a No. 2 reagent (referred to as the second reagent elsewhere in the present invention) to the product of the previous step reaction to reduce the effect of the No. 1 reagent on the subsequent enzymatic reaction; (4) directly performing a PCR reaction mediated by a special primer (the primer targets the No. 1 linker, and the No. 1 linker includes two linker parts, each of which contains a common transposase recognition sequence and other different sequences) without purification, thereby obtaining a PCR product in which the two ends of the target sequence are connected to completely different sequences except the transposase recognition sequence, and this product can be used in subsequent molecular biology experiments.

请参考图1C,本发明的对应于二号接头引入方案优化的无需纯化一站式反应的操作流程主要包括:(1)利用转座酶包埋特定修饰序列的一号接头用于对基因组序列、全基因组扩增序列和PCR产物序列等核酸序列进行随机打断;(2)通过蛋白酶或其它特定比例的一号试剂处理打破转座酶和靶序列的吸附作用实现无纯化操作;(3)加入二号试剂,以减弱一号试剂对后续酶促反应的影响;(4)通过在9nt缺口进行二号接头(本发明中其它地方称为第二接头或空隙接头)连接的方式,实现二号接头的引入,改变片段化的靶序列毗邻的接头碱基序列,使得靶序列两侧的序列完全不同,其中一段保留有含转座酶识别序列的一号接头序列,而另一段完全是任意设计的二号接头序列;(5)直接进行特殊引物(引物分别靶向结合一号接头和二号接头)介导的PCR反应,从而得到靶序列两端连接有完全不同的序列的PCR产物,这种产物可以用于后续的分子生物学实验。1C , the operational flow of the one-stop reaction without purification corresponding to the scheme for introducing the second adapter of the present invention mainly includes: (1) using the first adapter embedded with a specific modified sequence of transposase to randomly interrupt nucleic acid sequences such as genomic sequences, whole genome amplification sequences and PCR product sequences; (2) breaking the adsorption of the transposase and the target sequence by treating with protease or other specific proportions of the first reagent to achieve a purification-free operation; (3) adding the second reagent to reduce the effect of the first reagent on the subsequent enzymatic reaction; (4) introducing the second adapter (referred to as the second adapter or gap adapter elsewhere in the present invention) by connecting the second adapter at the 9nt gap, changing the adapter base sequence adjacent to the fragmented target sequence, so that the sequences on both sides of the target sequence are completely different, one of which retains the first adapter sequence containing the transposase recognition sequence, and the other is a completely arbitrarily designed second adapter sequence; (5) directly performing a PCR reaction mediated by special primers (primers targeting the first adapter and the second adapter respectively) to obtain a PCR product with completely different sequences connected at both ends of the target sequence, which can be used in subsequent molecular biology experiments.

在转座酶包埋阶段,本发明同时选择了两种包埋方式:第一种为转座酶包埋一号接头双接头形成座酶包埋复合体(图1B),两个接头中都含有特殊的19bp转座酶识别序列,但分别还含有不同的其它序列;第二种为转座酶包埋一号接头单接头形成复合体(图1C),通过对包埋接头的特殊修饰,使得包埋的一号接头序列中有一段含有特殊的19bp转座酶识别序列,同时为避免未包埋的一号接头与二号接头的互相连接而影响PCR,本发明中对接头进行3’端双脱氧修饰,即3’端为双脱氧核苷酸。During the transposase embedding stage, the present invention simultaneously selects two embedding methods: the first is that the transposase embeds the first adapter with a double adapter to form a transposase embedding complex (Figure 1B), in which both adapters contain a special 19bp transposase recognition sequence, but each also contains different other sequences; the second is that the transposase embeds the first adapter with a single adapter to form a complex (Figure 1C). Through special modification of the embedded adapter, a segment of the embedded first adapter sequence contains a special 19bp transposase recognition sequence. At the same time, to prevent the unembedded first adapter from connecting with the second adapter and affecting PCR, the adapter is modified at the 3' end with a dideoxy nucleotide in the present invention.

本发明中采用了一家国产(南京诺唯赞公司的Truprep试剂盒的S50系列)的转座酶试剂盒进行实验,试剂盒包含5ng基因组DNA和50ng基因组DNA用量两种,本实施方案采用50ng基因组用量进行实验。The present invention uses a domestically produced transposase kit (S50 series of Truprep kit produced by Nanjing Novozymes) for experiments. The kit contains two amounts of 5ng genomic DNA and 50ng genomic DNA. This embodiment uses 50ng genomic DNA for experiments.

实施例1Example 1

本实施例首先用包埋的转座酶复合体将50ng高质量的基因组DNA进行打断操作,经过蛋白酶、SDS、NT或蛋白酶和EDTA组合物来处理,去除结合在DNA上的转座酶蛋白;然后直接用PCR引物进行扩增,PCR反应体系中加入一定浓度的TritonX-100。In this example, 50 ng of high-quality genomic DNA was first fragmented using the embedded transposase complex. The DNA was then treated with protease, SDS, NT, or a combination of protease and EDTA to remove the transposase protein bound to the DNA. PCR primers were then used for direct amplification, and a certain concentration of Triton X-100 was added to the PCR reaction system.

1、设计订购带有19bp转座酶识别序列的三条引物序列,序列A、序列B和序列C,用于制备包埋用的一号接头双接头(本发明中称为一号接头),其中序列A+序列B组成一号接头双接头5端;序列A+序列C组成一号接头双接头3端:1. Design and order three primer sequences with a 19 bp transposase recognition sequence, sequence A, sequence B, and sequence C, for preparing the No. 1 adapter double adapter (referred to as No. 1 adapter in this invention) for embedding. Sequence A + sequence B constitute the No. 1 adapter double adapter 5 end; sequence A + sequence C constitute the No. 1 adapter double adapter 3 end:

一号接头双接头序列A:CTGTCTCTTATACACATCT(SEQ ID NO:1);Linker No. 1 double linker sequence A: CTGTCTCTTATACACATCT (SEQ ID NO: 1);

一号接头双接头序列B:TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG(SEQ ID NO:2);Linker No. 1 double linker sequence B: TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG (SEQ ID NO: 2);

一号接头双接头序列C:GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG(SEQ ID NO:3)。Linker No. 1 double linker sequence C: GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG (SEQ ID NO: 3).

2、将序列A、序列B和序列C分别稀释到100μM,序列A+序列B组合,序列A+序列C组合,充分混合后离心,于PCR仪中按如下程序(表1)退火得到一号接头(储存于-20℃),用于包埋复合体的制备。2. Sequence A, sequence B, and sequence C were diluted to 100 μM, respectively, and sequence A + sequence B and sequence A + sequence C were combined. After thorough mixing, centrifugation was performed and annealed in a PCR instrument according to the following procedure (Table 1) to obtain linker No. 1 (stored at -20°C) for preparation of the embedding complex.

表1Table 1

反应后将两组退火后的接头等体积混合,用于包埋转座酶复合体。After the reaction, the two sets of annealed adapters were mixed in equal volumes and used to embed the transposase complex.

3、按照如下体系(表2)将一号接头与转座酶包埋成转座酶包埋复合体,轻轻吹打20次混合,30℃孵育1小时后完成复合体包埋。该复合体储存于-20℃。3. According to the following system (Table 2), embed the first adapter and transposase into a transposase-embedded complex. Gently pipette 20 times to mix. Incubate at 30°C for 1 hour to complete the complex embedding. Store the complex at -20°C.

表2Table 2

组分Components 含量content 转座酶S50试剂Transposase S50 reagent 47μL47μL 一号接头Connector No. 1 2μL2μL 偶联缓冲液Coupling buffer 47μL47μL 合计total 96μL96μL

4、按照如下体系(表3)将50ng的高质量基因组和转座酶复合体进行混合,轻轻吹打20次混合,55℃孵育10分钟后降温至4℃,完成基因组的打断。4. Mix 50 ng of high-quality genome and transposase complex according to the following system (Table 3), gently pipette 20 times to mix, incubate at 55°C for 10 minutes, and then cool to 4°C to complete genome fragmentation.

表3Table 3

组分Components 含量content water 5μL5μL 5×打断缓冲液5× disruption buffer 2μL2μL gDNA(50ng/μL)gDNA (50 ng/μL) 1μL1 μL 打断酶复合体Disrupt enzyme complex 2μL2μL 合计total 10μL10 μL

5、打断后的样本处理方法有以下几种选择,方法1:加入1倍体积的PBI(QiagenPCR纯化试剂盒中的一种商业试剂)混匀后再用1.3倍数的Ampure XP beads纯化,回融采用纯水;方法2:加入0.1-5μL蛋白酶(750mAU/mL)进行处理,然后加入终浓度1-50mM的EDTA,本实施例优选2μL蛋白酶和终浓度14mM的EDTA,并且同时对0.1μL蛋白酶加1mM EDTA和5μL蛋白酶加50mM EDTA组合进行测试;方法3:加入0.01%-1.5%(体积比)的SDS,本实施例优选1%(体积比)的SDS,并且对0.01%(体积比)和1.5%(体积比)浓度分别进行了测试;方法4:加入终浓度的商业1×NT缓冲液(Truprep试剂盒S5系列中配套试剂);方法5:加入0.1-5μL蛋白酶进行处理,本实施优选2μL蛋白酶,并且对0.1μL和5μL蛋白酶用量分别进行了测试。5. There are several options for sample processing after shearing. Method 1: Add 1 volume of PBI (a commercial reagent in the Qiagen PCR purification kit) and mix well, then purify with 1.3 times of Ampure XP beads, and re-melt with pure water; Method 2: Add 0.1-5μL protease (750mAU/mL) for treatment, and then add EDTA with a final concentration of 1-50mM. In this example, 2μL protease and a final concentration of 14mM EDTA are preferred, and 0.1μL protease plus 1mM EDTA and 5μL protease plus 50mM EDTA are also used. EDTA combination was tested; Method 3: adding 0.01%-1.5% (volume ratio) of SDS, preferably 1% (volume ratio) of SDS in this embodiment, and the concentrations of 0.01% (volume ratio) and 1.5% (volume ratio) were tested respectively; Method 4: adding a final concentration of commercial 1×NT buffer (matching reagent in the Truprep kit S5 series); Method 5: adding 0.1-5 μL of protease for treatment, preferably 2 μL of protease in this embodiment, and the amounts of 0.1 μL and 5 μL of protease were tested respectively.

6、在上述处理以后的产物中,加入0.1%-2%(体积比)的Triton-X100,本实施例中优选1%(体积比),同时对0.1%(体积比)和2%(体积比)用量的Triton-X100进行测试。6. After the above treatment, 0.1%-2% (volume ratio) of Triton-X100 was added to the product. In this embodiment, 1% (volume ratio) was preferred. Triton-X100 at dosages of 0.1% (volume ratio) and 2% (volume ratio) was tested.

7、按照如下PCR反应体系(表4)及反应条件(表5)进行PCR扩增。对于加入了SDS的实验组,在该PCR体系中还加入特定浓度的吐温-20来部分提高PCR的效率,吐温-20的工作浓度可以调整到不同,如0.1%-2%(体积比),本实施例优选0.5%(体积比),同时对0.1%(体积比)和2%(体积比)工作浓度的吐温-20进行了测试。7. PCR amplification was performed according to the following PCR reaction system (Table 4) and reaction conditions (Table 5). For the experimental group in which SDS was added, a specific concentration of Tween-20 was also added to the PCR system to partially improve PCR efficiency. The working concentration of Tween-20 can be adjusted to various levels, such as 0.1% to 2% (volume ratio), with 0.5% (volume ratio) being preferred in this example. Both 0.1% (volume ratio) and 2% (volume ratio) working concentrations of Tween-20 were tested.

表4Table 4

组分Components 含量content 处理后的DNA样品Processed DNA samples 30μL30μL 10μL10 μL 10mM dNTP10mM dNTP 1μL1 μL 引物1(10μM)Primer 1 (10 μM) 2μL2μL 引物2(10μM)Primer 2 (10 μM) 2μL2μL PCR酶(DNA聚合酶)PCR enzyme (DNA polymerase) 1μL1 μL 纯水pure water 4μL4μL 总量Total 50μL50μL

注:一号接头双接头引物1:AATGATACGGCGACCACCGA(SEQ ID NO:4);一号接头双接头引物2:CAAGCAGAAGACGGCATACGA(SEQ ID NO:5)。Note: No. 1 adapter double adapter primer 1: AATGATACGGCGACCACCGA (SEQ ID NO: 4); No. 1 adapter double adapter primer 2: CAAGCAGAAGACGGCATACGA (SEQ ID NO: 5).

表5Table 5

8、一号接头双接头转座酶复合体的PCR产物检测如图2所示,PCR产物浓度测定结果如表6所示:8. Detection of PCR products of the No. 1 adapter double adapter transposase complex is shown in Figure 2, and the results of PCR product concentration determination are shown in Table 6:

表6Table 6

实施例2Example 2

本实施例首先用包埋的转座酶复合体将50ng高质量的基因组DNA进行打断操作,经过蛋白酶、SDS、NT或蛋白酶和EDTA组合物来处理,去除结合在DNA上的转座酶蛋白;通过空隙接头连接后,直接用PCR引物进行扩增,PCR反应体系中加入一定浓度的TritonX-100。In this example, 50 ng of high-quality genomic DNA was first fragmented using the embedded transposase complex. The DNA was then treated with protease, SDS, NT, or a combination of protease and EDTA to remove the transposase protein bound to the DNA. After ligation via gap linkers, the DNA was directly amplified using PCR primers. A certain concentration of Triton X-100 was added to the PCR reaction system.

1、设计订购带有19bp转座酶识别序列的一对引物序列,序列A和序列B,用于制备包埋用的一号接头单接头(本发明中称为一号接头):1. Design and order a pair of primer sequences with a 19bp transposase recognition sequence, sequence A and sequence B, for preparing a single adapter No. 1 for embedding (referred to as adapter No. 1 in the present invention):

一号接头单接头序列A:TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG(SEQ ID NO:6);Linker No. 1 single linker sequence A: TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG (SEQ ID NO: 6);

一号接头单接头序列B:CTGTCTCTTATACACATC ddT(SEQ ID NO:7,dd表示双脱氧修饰)。Linker No. 1 single linker sequence B: CTGTCTCTTATACACATC ddT (SEQ ID NO: 7, dd indicates dideoxy modification).

2、将序列A和序列B稀释到100μM,充分混合后离心,于PCR仪中按如下程序(表7)退火得到一号接头(储存于-20℃),用于包埋复合体的制备。2. Dilute sequence A and sequence B to 100 μM, mix thoroughly, and centrifuge. Anneal in a PCR instrument according to the following procedure (Table 7) to obtain adapter No. 1 (stored at -20°C) for preparation of the embedding complex.

表7Table 7

3、按照如下体系(表8)将一号接头与转座酶包埋成转座酶复合体,轻轻吹打20次混合,30℃孵育1小时后完成复合体包埋。该复合体储存于-20℃。3. Embed the first adapter and transposase into a transposase complex according to the following system (Table 8). Gently pipette 20 times to mix. Incubate at 30°C for 1 hour to complete the complex embedding. Store the complex at -20°C.

表8Table 8

组分Components 含量content 转座酶transposase 85μL85μL 一号接头Connector No. 1 30μL30μL 偶联缓冲液Coupling buffer 85μL85μL 合计total 200μL200 μL

4、按照如下体系(表9)将50ng的高质量基因组和转座酶复合体进行混合,轻轻吹打20次混合,55℃孵育10分钟后降温至4℃,完成基因组的打断。4. Mix 50 ng of high-quality genome and transposase complex according to the following system (Table 9), gently pipette 20 times to mix, incubate at 55°C for 10 minutes, and then cool to 4°C to complete genome fragmentation.

表9Table 9

组分Components 含量content water 5μL5μL 5×打断缓冲液5× disruption buffer 2μL2μL gDNA(50ng/μL)gDNA (50 ng/μL) 1μL1 μL 打断酶复合体Disrupt enzyme complex 2μL2μL 合计total 10μL10 μL

5、打断后的样本处理方法有以下几种选择,方法1:加入0.1-5μL蛋白酶(750mAU/mL)进行处理,本实施优选2μL蛋白酶,同时对0.1μL和5μL蛋白酶用量分别进行了测试;方法2:加入终浓度的商业1×NT缓冲液(Truprep试剂盒S5系列中配套试剂);方法3:加入0.01%-1.5%(体积比)的SDS,本实施例优选1%(体积比)的SDS,同时对0.01%(体积比)和1.5%(体积比)浓度分别进行了测试;方法4:加入0.1-5μL蛋白酶进行处理,然后加入终浓度1-50mM的EDTA,本实施例优选2μL蛋白酶和终浓度14mM的EDTA,同时对0.1μL蛋白酶加1mMEDTA和5μL蛋白酶加50mM EDTA组合进行测试;方法5:加入1倍体积的PBI(Qiagen PCR纯化试剂盒中的一种商业试剂)混匀后再用1.3倍数的Ampure XP beads纯化,回融采用纯水。5. There are several options for processing the sample after shearing. Method 1: Add 0.1-5 μL protease (750 mAU/mL) for treatment. In this embodiment, 2 μL protease is preferred. At the same time, 0.1 μL and 5 μL protease dosages are tested respectively. Method 2: Add a final concentration of commercial 1× NT buffer (supporting reagents in the Truprep kit S5 series); Method 3: Add 0.01%-1.5% (volume ratio) SDS. In this embodiment, 1% (volume ratio) SDS is preferred. At the same time, 0.01% (volume ratio) and 1.5% (volume ratio) concentrations are tested respectively. Method 4: Add 0.1-5 μL protease for treatment, and then add EDTA at a final concentration of 1-50 mM. In this embodiment, 2 μL protease and a final concentration of 14 mM EDTA are preferred. At the same time, the combinations of 0.1 μL protease plus 1 mM EDTA and 5 μL protease plus 50 mM EDTA are tested; Method 5: Add 1 volume of PBI (Qiagen The resulting product was purified using Ampure XP beads at a 1.3x dilution ratio and then reconstituted with pure water.

6、在上述处理以后的产物中,加入0.1%-2%(体积比)的Triton-X100,本实施例中优选1%(体积比),同时对0.1%(体积比)和2%(体积比)用量的Triton-X100进行测试。6. After the above treatment, 0.1%-2% (volume ratio) of Triton-X100 was added to the product. In this embodiment, 1% (volume ratio) was preferred. Triton-X100 at dosages of 0.1% (volume ratio) and 2% (volume ratio) was tested.

7、上述Triton-X100处理后的产物按照如下体系(表10)进行退火后空隙接头(二号接头)的连接,25℃孵育60分钟完成接头连接。7. The Triton-X100-treated product was annealed and connected to the gap adapter (Adapter No. 2) according to the following system (Table 10), and the adapter connection was completed by incubation at 25°C for 60 minutes.

表10Table 10

组分Components 含量content water 8μL8μL 3×连接buffer3× connection buffer 20μL20 μL 二号接头(5μM)Adapter No. 2 (5μM) 10μL10 μL 连接酶Ligase 2μL2μL DNADNA 20μL20 μL 合计total 30μL30μL

注:二号接头序列A:5’-pAAGTCGGAGGCCAAGCGGTCGT ddC-3’(SEQ ID NO:8);二号接头序列B:5’-TTGGCCTCCGACT ddT-3’(SEQ ID NO:9)(p表示磷酸化修饰;dd表示双脱氧修饰)。Note: Linker sequence A: 5’-pAAGTCGGAGGCCAAGCGGTCGT ddC-3’ (SEQ ID NO: 8); Linker sequence B: 5’-TTGGCCTCCGACT ddT-3’ (SEQ ID NO: 9) (p indicates phosphorylation modification; dd indicates dideoxy modification).

8、按照如下PCR反应体系(表11)及反应条件(表12)进行PCR扩增。对于加入了SDS的实验组,在该PCR体系中还需要加入特定浓度的吐温-20来部分提高PCR的效率,吐温-20的工作浓度可以调整到不同,如0.1%-2%(体积比),本实施例优选0.5%,同时对0.1%(体积比)和2%(体积比)工作浓度的吐温-20进行了测试。8. PCR amplification was performed according to the following PCR reaction system (Table 11) and reaction conditions (Table 12). For the experimental group in which SDS was added, a specific concentration of Tween-20 was also added to the PCR system to partially improve PCR efficiency. The working concentration of Tween-20 can be adjusted to various levels, such as 0.1% to 2% (volume ratio), with 0.5% being preferred in this example. Both 0.1% (volume ratio) and 2% (volume ratio) working concentrations of Tween-20 were tested.

表11Table 11

注:一号接头单接头引物1:Note: Adapter single adapter primer 1:

AGACAAGCTCGAGCTCGAGCGATCGGGATCTACACGACTCACTGATCGTCGGCAGCGTC(SEQ IDNO:10);一号接头单接头引物2:TCCTAAGACCGCTTGGCCTCCGACT(SEQ ID NO:11)。AGACAAGCTCGAGCTCGAGCGATCGGGATCTACACGACTCACTGATCGTCGGCAGCGTC (SEQ ID NO: 10); Adapter single adapter primer 2: TCCTAAGACCGCTTGGCCTCCGACT (SEQ ID NO: 11).

表12Table 12

9、单接头包埋复合体打断及空隙接头连接后PCR产物检测结果如图3所示,PCR产物浓度测定结果如表13。9. The results of PCR product detection after single-linker embedded complex fragmentation and gap linker ligation are shown in Figure 3, and the results of PCR product concentration determination are shown in Table 13.

表13Table 13

以上内容是结合具体的实施方式对本发明所作的进一步详细说明,不能认定本发明的具体实施只局限于这些说明。对于本发明所属技术领域的普通技术人员来说,在不脱离本发明构思的前提下,还可以做出若干简单推演或替换。The above is a further detailed description of the present invention in conjunction with specific embodiments, and the specific implementation of the present invention cannot be considered to be limited to these descriptions. For ordinary technicians in the technical field to which the present invention belongs, several simple deductions or substitutions can be made without departing from the concept of the present invention.

Claims (5)

1.一种核酸的转座酶打断一站式处理方法,包括如下步骤:1. A one-stop method for transposase-mediated disruption of nucleic acids, comprising the following steps: 使用转座酶包埋复合体对核酸进行随机打断,其中所述转座酶包埋复合体包含转座酶和含转座酶识别序列的第一接头;The nucleic acid is randomly fragmented using a transposase embedding complex, wherein the transposase embedding complex comprises a transposase and a first adapter containing a transposase recognition sequence. 加入第一试剂进行处理,打破所述转座酶与所述核酸的靶序列的吸附作用;The first reagent is added to break the adsorption of the transposase to the target sequence of the nucleic acid; 加入第二试剂进行处理,减弱所述第一试剂对后续酶促反应的影响;A second reagent is added to reduce the effect of the first reagent on the subsequent enzymatic reaction. 以所述第二试剂处理后的产物为模板成分进行PCR反应,得到打断的核酸片段两端连接有接头的PCR产物;Using the product treated with the second reagent as a template, a PCR reaction was performed to obtain a PCR product with adapters attached to both ends of the broken nucleic acid fragments. 其中所述第一试剂包含SDS溶液;The first reagent contains an SDS solution; 其中所述第二试剂包含Triton-X100溶液,并且还包含吐温-20溶液。The second reagent contains a Triton-X100 solution and also contains a Tween-20 solution. 2.根据权利要求1所述的方法,其特征在于,在加入第二试剂进行处理之后并且在进行PCR反应之前还包括:通过连接酶在缺口处连接上第二接头,其中所述缺口是在打断的核酸两端连接所述第一接头后形成的9bp碱基缺失。2. The method according to claim 1, characterized in that, after treatment with the second reagent and before performing the PCR reaction, it further comprises: ligating a second adapter at the gap using a ligase, wherein the gap is a 9bp deletion formed after the first adapter is ligated to both ends of the broken nucleic acid. 3.根据权利要求2所述的方法,其特征在于,所述第二接头的3’端为双脱氧核苷酸,以防止所述第二接头与所述第一接头互连。3. The method according to claim 2, wherein the 3' end of the second connector is a dideoxynucleotide to prevent the second connector from interconnecting with the first connector. 4.一种核酸的转座酶打断一站式处理试剂,包括如下组成部分:4. A one-stop reagent for transposase disruption of nucleic acids, comprising the following components: 第一试剂,包含SDS溶液,用于打破所述转座酶与所述核酸的靶序列的吸附作用;The first reagent contains an SDS solution, used to break the adsorption of the transposase to the target sequence of the nucleic acid; 第二试剂,包含Triton-X100溶液和吐温-20溶液,用于减弱所述第一试剂对后续酶促反应的影响;The second reagent, comprising Triton-X100 solution and Tween-20 solution, is used to reduce the effect of the first reagent on subsequent enzymatic reactions; 还包括:Also includes: 转座酶和含转座酶识别序列的第一接头,用于形成转座酶包埋复合体以对核酸进行随机打断;Transposase and a first linker containing a transposase recognition sequence are used to form a transposase embedding complex to randomly break down nucleic acids; 还包括:Also includes: PCR组分,用于以所述第二试剂处理后的产物为模板成分进行PCR反应。PCR components are used to perform PCR reactions using the product of the second reagent as a template. 5.根据权利要求4所述的试剂,其特征在于,所述试剂还包括:5. The reagent according to claim 4, characterized in that the reagent further comprises: 第二接头组分,用于连入打断的核酸两端连接所述第一接头后形成的缺口处:The second adapter component is used to connect to the gap formed after the two ends of the broken nucleic acid are connected to the first adapter: 连接酶组分,用于在打断的核酸两端连接所述第一接头后形成的缺口处连接上第二接头。The ligase component is used to attach a second adapter to the gap formed after the first adapter is attached to both ends of the broken nucleic acid.
HK17113601.5A 2014-10-14 One-stop treatment method for breaking nucleic acid by means of transposase, and reagent HK1240277B (en)

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