DK175856B1 - New bovine and human acidic fibroblast growth factors - useful for stimulating DNA synthesis in responsive cells and esp. for wound heating - Google Patents
New bovine and human acidic fibroblast growth factors - useful for stimulating DNA synthesis in responsive cells and esp. for wound heating Download PDFInfo
- Publication number
- DK175856B1 DK175856B1 DK199801023A DKPA199801023A DK175856B1 DK 175856 B1 DK175856 B1 DK 175856B1 DK 199801023 A DK199801023 A DK 199801023A DK PA199801023 A DKPA199801023 A DK PA199801023A DK 175856 B1 DK175856 B1 DK 175856B1
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- afgf
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- bovine
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Abstract
Description
DK 175856 B1 iDK 175856 B1 i
Beskrivelse af figur.Description of figure.
Fig. 1 viser skematisk pKK223-3 plasmidet, som indeholder genet for aFGF. Baggrund for opfindelsen.FIG. 1 schematically shows the pKK223-3 plasmid containing the gene for aFGF. BACKGROUND OF THE INVENTION.
5 Hjemeafledte fibroblastmitogener blev først beskrevet af Trowell et al., J.Home-derived fibroblast mitogens were first described by Trowell et al., J.
Exp. Biol. 16: 60-70 (1939) og Hoffman, Growth 4: 361-376 (1940). Det blev derefter vist, at hypofyseekstrakter også havde kraftig mitogen aktivitet for fi-brobiaster, Armelin, Proc. Natl. Acad. Sci. USA 70: 2702-2706 (1973). Delvis rensning af både hjerne- og hypofysefibroblasvækstfaktor (FGF) afslørede 10 mitogen aktivitet mod en række forskellige typer adkilte celler, herunder vaskulære endothelialceller, Gospodarowicz et al., Natl. Cancer Inst. Mo-nogr. 48: 109-130 (1978). Det er fomyligt blev vist, at FGF eksisterer på to former, sur FGF (aFGF) og basisk FGF (bFGF), og begge former er blevet identificeret i hjemepræparater, Thomas og Gimenez-Gallego, TIBS 11:81 -15 84 (1986). Adskillige celletyper responderer til stimulering med enten renset aFGF eller bFGF ved syntetisering af DNA og delen, herunder primære fi-broblaster, vaskulære celler og hornhinde endothelialceller, chondrocyter, osteoblaster, myoblaster, glatmuskelceller og glialceller, Esch et al., Proc.Exp. Biol. 16: 60-70 (1939) and Hoffman, Growth 4: 361-376 (1940). It was then shown that pituitary extracts also had potent mitogenic activity for fibroblasts, Armelin, Proc. Natl. Acad. Sci. USA 70: 2702-2706 (1973). Partial purification of both brain and pituitary fibroblast growth factor (FGF) revealed 10 mitogenic activity against a number of different types of adrenal cells, including vascular endothelial cells, Gospodarowicz et al., Natl. Cancer Inst. Mo nogr. 48: 109-130 (1978). It has been shown that FGF exists in two forms, acidic FGF (aFGF) and basic FGF (bFGF), and both forms have been identified in home remedies, Thomas and Gimenez-Gallego, TIBS 11:81-15 84 (1986) . Several cell types respond to stimulation with either purified aFGF or bFGF by synthesizing DNA and the portion, including primary fibroblasts, vascular cells and cornea endothelial cells, chondrocytes, osteoblasts, myoblasts, smooth muscle cells and glial cells, Esch et al., Proc.
Natl. Acad. Sci. USA 82:6507-6511 (1985), Kuo et al., Fed. Proc. 44:695 20 (1985).Natl. Acad. Sci. USA 82: 6507-6511 (1985), Kuo et al., Fed. Proc. 44: 695 (1985).
Ren kvæghjemeafledt aFGF virker ikke blot som et kraftigt mitogen for vaskulære endothelialceller i kultur; men inducerer også blodkarvækst in vivo, Thomas et al., Proc. Natl. Acad. Sci. USA 82: 6409-6413 (1985). Den fi-25 broblastmitogene aktivitet for aFGF kan også anvendes til at fremme sårheling, Thomas, US patentskrift nr. 4 444 760. Den foreliggende opfindelse tilvejebringer en genetisk konstruktion og midler til ekspression, der muliggør produktion af store mængder ren aFGF, der kan anvendes terapeutisk.Pure cattle home-derived aFGF not only acts as a potent mitogen for vascular endothelial cells in culture; but also induces blood vessel growth in vivo, Thomas et al., Proc. Natl. Acad. Sci. USA 82: 6409-6413 (1985). The fibroblast mitogenic activity of aFGF can also be used to promote wound healing, Thomas, U.S. Patent No. 4,444,760. The present invention provides a genetic construct and agents for expression that allow production of large amounts of pure aFGF that can be used. therapeutically.
3 0 Formål med opfindelsen.Objects of the Invention.
Formålet med den foreliggende opfindelse er at tilvejebringe en nukleotidba-sesekvens for såvel bovin aFGF som human aFGF ud fra de specifikke proteiners aminosyresekvenser. Et andet formål er at fremstille gener, som koder for de specifikke aFGF, samt at indbygge generne i passende klonings 35 værter. Et yderligere formål er at transformere en passende vært med hver af de rekombinante vektorer og at inducere ekspression af de specifikke aF- 2 DK 175856 B1 GF gener. Endnu et formål er at isolere og oprense biologisk aktiv bovin aF-GF og human aFGF. Disse og andre formål vil fremgå af den følgende beskrivelse.The object of the present invention is to provide a nucleotide base sequence for both bovine aFGF and human aFGF from the amino acid sequences of the specific proteins. Another object is to produce genes encoding the specific aFGF as well as to incorporate the genes into appropriate cloning 35 hosts. A further object is to transform an appropriate host with each of the recombinant vectors and to induce expression of the specific aF-2GF genes. Another object is to isolate and purify biologically active bovine aF-GF and human aFGF. These and other purposes will be apparent from the following description.
5 Sammendrag af opfindelsen.Summary of the Invention.
Der konstrueres unikke gener, som koder for aminosyresekvensen for bovin sur fibroblastvækstfaktor (aFGF) og human aFGF. Det bovine gen er afledt fra omvendt translation af aFGF aminosyresekvensen, mens det humane gen er afledt ved specifikke punktmutationer af det bovine gen. Hver genio konstruktion indsættes i en ekspressionsvektor, som anvendes til at transformere en passende vært. De transformerede værtceller producerer rekom-binant aFGF (r-aFGF), humant eller bovint, som renses og har en aktivitet ækvivalent med nativt protein.Unique genes are constructed that encode the amino acid sequence of bovine acidic fibroblast growth factor (aFGF) and human aFGF. The bovine gene is derived from reverse translation of the aFGF amino acid sequence, while the human gene is derived by specific point mutations of the bovine gene. Each genius construct is inserted into an expression vector used to transform an appropriate host. The transformed host cells produce recombinant aFGF (r-aFGF), human or bovine, which is purified and has an activity equivalent to native protein.
15 Detaljeret beskrivelse15 Detailed description
Sure fibroblastvækstfaktorer eksisterer i forskellige mikroheterogene former, som isoleres fra de forskellige vævskilder og celletyper, der er kendte for at indeholde aFGF. Mikroheterogene former som anvendt heri refererer til et enkelt genprodukt, som er et peptid produceret ud fra en enkelt genenhed af 20 DNA, hvilket DNA er strukturelt modificeret efter translation. De strukturelle modifikationer resulterer imidlertid ikke i nogle væsentlige ændringer i biologisk aktivitet af peptidet. Modifikationerne kan finde sted enten in vivo eller under isoleringen og rensningsprocessen. In vivo modifikation resulterer i, men er ikke begrænset til, proteolyse, glycolysering, phosphorylering eller 25 acetylering ved den N-terminale ende. Proteolyse kan omfatte exoproteoly-se, hvori en eller flere terminale aminosyrer kløves sekventielt, enzymatisk til fremstilling af en mikroheterogen form, som har færre aminosyrer end det oprindelige genprodukt. Endoproteolytisk modifikation er et resultat af virkningen af endoproteaser, som kløver peptidet ved specifikke lokaliseringer 30 inde i aminosyresekvensen. Lignende modifikationer kan forekomme under rensningsprocessen, som også resulterer i produktion af mikroheterogene former. Den mest almindelige modifikation forekommende under rensning er proteolyse, som generelt holdes på et minimum ved anvendelse af protea-seinhibitorer. Under de fleste tilstande er en blanding af mikroheterogene 35 former til stede efter rensning af nativt aFGF. Nativt aFGF refererer til aFGF isoleret og renset fra væv eller celler, der indeholder aFGF.Acidic fibroblast growth factors exist in various microheterogeneous forms which are isolated from the various tissue sources and cell types known to contain aFGF. Microheterogeneous forms as used herein refer to a single gene product, which is a peptide produced from a single gene unit of 20 DNA, which DNA is structurally modified after translation. However, the structural modifications do not result in any significant changes in biological activity of the peptide. The modifications can take place either in vivo or during the isolation and purification process. In vivo modification results in, but is not limited to, proteolysis, glycolysis, phosphorylation or acetylation at the N-terminal end. Proteolysis may comprise exoproteolysis in which one or more terminal amino acids are sequentially cleaved, enzymatically to produce a microheterogeneous form having fewer amino acids than the original gene product. Endoproteolytic modification results from the action of endoproteases that cleave the peptide at specific locations within the amino acid sequence. Similar modifications may occur during the purification process, which also results in the production of microheterogeneous forms. The most common modification that occurs during purification is proteolysis, which is generally kept to a minimum using protea signal inhibitors. In most conditions, a mixture of microheterogeneous forms is present after purification of native aFGF. Native aFGF refers to aFGF isolated and purified from tissues or cells containing aFGF.
3 DK 175856 B13 DK 175856 B1
Opfindelsen omfatter alle mikroheterogene former for sur fibroblastvækstfak-tor fra pattedyr. De foretrukne udførelsesformer omfatter bovine og humane k mikroheterogene former af aFGF. De mest foretrukne mikroheterogene for- 5 . mer for bovin aFGF omfatter en form med 154 aminosyrer, en med 140 ami- ! nosyrer og en med 134 aminosyrer. Formen med 140 aminosyrer fremgår af tabel III, og det er den mest foretrukne af de ovennævnte bovine arter. Formen med 154 aminosyrer omfatter yderligere følgende aminosyrer: 10 Ala-Glu-Gly-Glu-Thr-Thr-Thr-Phe-Thr-Ala-Leu-Thr-Glu-Lys, hvor den carboxylterminale Lys er knyttet til den aminoterminale Phe ved . første stilling i formen med 140 aminosyrer. Formen med de 134 aminosyrer er identisk med formen med de 140 aminosyrer med undtagelse af, at de 6 15 første aminosyrer fra den aminoterminale ende er blevet fjernet. Efter isolering varierer de relative mængder af disse mikroheterogene former afhængigt af den fremgangsmåde, der er blevet anvendt, men alle præparater indeholder i det mindste en del af hver form.The invention encompasses all microheterogeneous forms of mammalian acidic fibroblast growth factor. The preferred embodiments include bovine and human micro-heterogeneous forms of aFGF. The most preferred microheterogeneous forms. more for bovine aFGF comprises a 154 amino acid form, one with 140 amino acids nos acids and one with 134 amino acids. The form of 140 amino acids is shown in Table III and it is the most preferred of the above bovine species. The 154 amino acid form further comprises the following amino acids: Ala-Glu-Gly-Glu-Thr-Thr-Thr-Phe-Thr-Ala-Leu-Thr-Glu-Lys, wherein the carboxyl terminal Lys is attached to the amino-terminal Phe at. first position in the form of 140 amino acids. The form with the 134 amino acids is identical to the form with the 140 amino acids except that the first 6 amino acids from the amino terminal end have been removed. After isolation, the relative amounts of these microheterogeneous forms vary depending on the method used, but all preparations contain at least a portion of each form.
20 Humant aFGF udviser en lignende mikroheterogenicitet som bovin aFGF. De mest foretrukne mikroheterogene former for humant aFGF omfatter en form med 154 aminosyrer, 140 aminosyrer eller 139 aminosyrer. Den humane form med 140 aminosyrer afviger fra den bovine form med 11 aminosyrer, hvilket fremgår af tabel V. Formen med 154 aminosyrer indeholder den nøj-25 agtige sekvens for den humane form med 140 aminosyrer plus 14 yderligere aminosyrer associeret med den bovine form med 154 aminosyrer på en undtagelse nær. Aminosyren i den femste stilling fra den N-terminale ende eller stilling -10 som bestemt ud fra den 140 aminosyre Phe N-terminus i den humane form og erstatter threonin i den bovine form. De yderligere 14 amino-30 syrer i den humane N-terminale sekvens er:Human aFGF exhibits a similar microheterogeneity as bovine aFGF. The most preferred microheterogeneous forms of human aFGF include a form of 154 amino acids, 140 amino acids or 139 amino acids. The 140 amino acid human form differs from the 11 amino acid bovine form as shown in Table V. The 154 amino acid form contains the exact sequence of the 140 amino acid human form plus 14 additional amino acids associated with the 154 bovine form. amino acids on an exception near. The amino acid in the fifth position from the N-terminal end or position -10 as determined from the 140 amino acid Phe N-terminus in the human form and replaces threonine in the bovine form. The additional 14 amino acids in the human N-terminal sequence are:
Ala-Glu-Gly-Glu-lle-Thr-Thr-Phe-Thr-Ala-Leu-Thr-Glu-Lys.Ala-Glu-Gly-Glu-Ile-Thr-Thr-Phe-Thr-Ala-Leu-Thr-Glu-Lys.
En tredie form for human aFGF indeholder 139 aminosyrer og er ækvivalent 35 med den humane form med 140 aminosyrer, hvor den aminoterminale phe-nylalanin er fjernet. Den aminoterminale asparaginrest kan være deamideret 4 DK 175856 B1 til aspartinsyre i den humane form for aFGF med 139 aminosyrer. Formerne med 140 og 139 aminosyrer er de mest foretrukne former af de humane mi-kroheterogene former.A third form of human aFGF contains 139 amino acids and is equivalent to the human form of 140 amino acids, where the amino terminal phenylalanine is removed. The amino-terminal asparagine residue may be deamidated to aspartic acid in the human form of aFGF of 139 amino acids. The 140 and 139 amino acid forms are the most preferred forms of the human microheterogeneous forms.
5 Pattedyrs r-aFGF produceret ved kloning af det naturlige gen fra enten den genome DNA eller cDNA eller ved konstruktion af gen for en af de mikrohe-terogene former for proteinet baseret på den kendte aminosyresekvens for disse mikroheterogene former for aFGF fra pattedyrarter, herunder menne sket. Genomt DNA ekstraheres fra pattedyrshjeme eller hypofyseceller og 10 forberedes for kloning ved enten tilfældig fragmentering af højmolekylvægt DNA efter teknikken af Maniatis et al., Cell 15: 687-701 (1978) eller ved kløvning med et restriktionsenzym ved metoden af Smithies et al., Science 202:1284-1289 (1978). Den genome DNA inkorporeres derpå i en passende kloningsvektor, almindeligvis E. coli lambda fag, se Maniatis et al., Molecular 15 Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York (1982).Mammalian r-aFGF produced by cloning the natural gene from either the genomic DNA or cDNA or by constructing a gene for one of the micro-heterogeneous forms of the protein based on the known amino acid sequence of these microheterogeneous forms of mammalian aFGF, including the human happened. Genome DNA is extracted from mammalian or pituitary cells and prepared for cloning by either random fragmentation of high molecular weight DNA following the technique of Maniatis et al., Cell 15: 687-701 (1978) or by cleavage with a restriction enzyme by the method of Smithies et al. Science 202: 1284-1289 (1978). The genomic DNA is then incorporated into a suitable cloning vector, generally E. coli lambda phage, see Maniatis et al., Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York (1982).
For at opnå cDNA for aFGF ekstraheres poly-(A)-holdig RNA fra celler, der udtrykker aFGF ved metoden af Aviv og Leder, Proc. Natl. Acad. Sci.To obtain cDNA for aFGF, poly- (A) -containing RNA is extracted from cells expressing aFGF by the method of Aviv and Leder, Proc. Natl. Acad. Sci.
20 69:1408-1412 (1972). cDNA fremstilles under anvendelse af omvendt trans- skriptase og DNA polymerase under anvendelse af standardteknikker som beskrevet af Maniatis et al.., Molecular Cloning, a Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York (1982). cDNA tai-les og klones ind i en passende vektor, sædvanligvis pBR322, ved en teknik, 25 der ligner den af Wensink, et al., Cell 3:315-325 (1974).69: 1408-1412 (1972). cDNA is prepared using reverse transcriptase and DNA polymerase using standard techniques as described by Maniatis et al., Molecular Cloning, a Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York (1982). cDNA is analyzed and cloned into a suitable vector, usually pBR322, by a technique similar to that of Wensink, et al., Cell 3: 315-325 (1974).
De klonale genome DNA eller cDNA biblioteker screenes for at identificere de kloner, der indeholder aFGF-sekvenser, ved hybridisering med en oligo-nukleotidprobe. Sekvensen for oligonukleotid-hybridiseringsproben er base-3 0 ret på den bestemte aminosyresekvens for aFGF. Maniatis et al., supra, Anderson og Kingston, Proc. Natl. Acad. Sci. USA 80:6838-6842 (1983) og Suggs et al., Proc. Natl. Acad. Sci. USA 78:6613-6617 (1981) beskriver forskellige procedurer til screening af genome og cDNA kloner.The clonal genomic DNA or cDNA libraries are screened to identify the clones containing aFGF sequences by hybridization with an oligonucleotide probe. The sequence of the oligonucleotide hybridization probe is based on the particular amino acid sequence of aFGF. Maniatis et al., Supra, Anderson and Kingston, Proc. Natl. Acad. Sci. USA 80: 6838-6842 (1983) and Suggs et al., Proc. Natl. Acad. Sci. USA 78: 6613-6617 (1981) discloses various procedures for screening genome and cDNA clones.
3 5 Den foretrukne procedure til opnåelse af et gen for pattedyrs aFGF er at syntetisere genet. Genet kan syntetiseres baseret.på aminosyresekvensen for 5 DK 175856 B1 en mikroheterogen form for aFGF opnået fra et vilkårligt pattedyr, herunder mennesket. Den foretrukne metode er at anvende den bovine aminosyrese-kvens for aFGF og kemisk punktmutere basesekvensen til fremstilling af generne for andre arter. Aminosyresekvenseme for bovint og humant aFGF er 5 . omtalt i US patentansøgning nr. 868 473, indleveret den 30. maj 1986, som er en continuation-in-part af US patentansøgning nr. 774 359, der blev indleveret den 12. september 1985, som igen er en continuation-in-part af US patentansøgning nr. 685 923, der blev indleveret den 24. december 1984, og som nu er faldet.The preferred procedure for obtaining a mammalian aFGF gene is to synthesize the gene. The gene can be synthesized based on the amino acid sequence of a microheterogeneous form of aFGF obtained from any mammal, including the human. The preferred method is to use the bovine amino acid sequence of aFGF and the chemical point mutant base sequence to produce the genes for other species. The amino acid sequences of bovine and human aFGF are 5. disclosed in U.S. Patent Application No. 868,473, filed May 30, 1986, which is a continuation-in-part of U.S. Patent Application No. 774,359 filed September 12, 1985, which is again a continuation-in-part. of U.S. Patent Application No. 685,923, filed December 24, 1984, and which has now declined.
1010
De syntetiske gener er baseret på den bestemte bovine aminosyresekvens tidligere beskrevet af Gimenez-Gallego et al., Science 230:1385-1388 (1985) og den humane aminosyresekvens som beskrevet af Gimenez-Gallego et al., Biochem. Biophys. Res. Comm., 138:611-617 (1986). Den unikke nu- 15 kleotidsekvens af den 140 aminosyre store form af bovint aFGF er afledt fra omvendt translation af aminosyresekvensen véd en teknik lignende den af Itakura et al., Science 198: 1056-1063 (1977). De forskellige hidtil ukendte nukleotidsekvenser svarende til den native aminosyresekvens for bovint aFGF fremgår af følgende tabel: 20 6 DK 175856 B1The synthetic genes are based on the particular bovine amino acid sequence previously described by Gimenez-Gallego et al., Science 230: 1385-1388 (1985) and the human amino acid sequence as described by Gimenez-Gallego et al., Biochem. Biophys. Res. Comm., 138: 611-617 (1986). The unique nucleotide sequence of the 140 amino acid form of bovine aFGF is derived from reverse translation of the amino acid sequence by a technique similar to that of Itakura et al., Science 198: 1056-1063 (1977). The various novel nucleotide sequences corresponding to the native amino acid sequence of bovine aFGF are shown in the following table: 20 6 DK 175856 B1
TABEL ITABLE I
5 '0 IS 205 '0 IS 20
Phe Asn Leu Pro leu 61 y Asn Tyr Lys Lys Pr<> Lys Uu L#u Tyr Cys Ser Asn G1y G1yPhe Asn Leu Pro leu 61 y Asn Tyr Lys Lys Pr <> Lys Uu L # u Tyr Cys Ser Asn G1y G1y
5 TTQ AAQ CTN CCN CTN 6GN AAQ TAQ AAP AAP CCN AAP C TN CTN TAO TGQ TCN AAQ GGN GGN5 TTQ AAQ CTN CCN CTN 6GN AAQ TAQ AAP AAP CCN AAP C TN CTN TAO TGQ TCN AAQ GGN GGN
TTP TTP TTP TTP agq 25 30 35 40TTP TTP TTP TTP agq 25 30 35 40
Tyr Phe Leu Arg Ile leu Pro Asp Gly Thr Val Asp G1y Thr Lys Asp Arg Ser Asp GinTyr Phe Leu Arg Ile leu Pro Asp Gly Thr Val Asp G1y Thr Lys Asp Arg Ser Asp Gin
io TAQ TT(> c™CGH ATG c™ CCN GGN ACN G™ ^06,1 ACN ^CGN TCN ^ CAPio TAQ TT (> c ™ CGH ATG c ™ CCN GGN ACN G ™ ^ 06.1 ACN ^ CGN TCN ^ CAP
TTP AGP ATA TTP AGP AGQTTP AGP ATA TTP AGP AGQ
45 50 55 6045 50 55 60
His Ile Gin Leu Gin Leu Cys AU Glu Ser lle Gly Glu Val Tyr Ile Lys Ser Thr GluHis Ile Gin Leu Gin Leu Cys AU Glu Ser lle Gly Glu Val Tyr Ile Lys Ser Thr Glu
CAQ ATO CAP CTN CAP CTN TGQ GCN GAP TCN ATQ GGN GAP GTN TAQ ATQ AAP TCN ACN GAPCAQ ATO CAP CTN CAP CTN TGQ GCN GAP TCN ATQ GGN GAP GTN TAQ ATQ AAP TCN ACN GAP
^5 ATA TTP TTP AGQ ΑΤΑ ΑΤΑ AGO^ 5 ATA TTP TTP AGQ ΑΤΑ ΑΤΑ AGO
65 70 75 BO65 70 75 BO
Thr Gly Gir, Phe Leu Ala Met Asp Thr Asp Gly Leu Leu Tyr Gly Ser Gin Thr Pro AsnThr Gly Gir, Phe Leu Ala With Asp Thr Asp Gly Leu Leu Tyr Gly Ser Gin Thr Pro Asn
ACN GGN CAP TTQ CTN GCN ATG GAQ ACN GAQ GGN CTN CTN TAQ GGN TCN CAP ACN CCN AAQACN GGN CAP TTQ CTN GCN ATG GAQ ACN GAQ GGN CTN CTN TAQ GGN TCN CAP ACN CCN AAQ
7TP TTP TTP AGO7TP TTP TTP AGO
20 85 90 95 ,0020 85 90 95, 00
Glu Glu Cys Leu Phe Leu Glu Arg Leu Glu Glu Asn His Tyr Asn Thr Tyr lie Ser LysGlu Glu Cys Leu Phe Leu Glu Arg Leu Glu Glu Asn His Tyr Asn Thr Tyr lie Ser Lys
GAP GAP TGQ CTN TTQ CTN GAP CGN CTN GAP GAP AAQ CAQ TAQ AAQ ACN TAQ ATQ TCN AAPGAP GAP TGQ CTN TTQ CTN GAP CGN CTN GAP GAP AAQ CAQ TAQ AAQ ACN TAQ ATQ TCN AAP
TTP TTP AGP TTP ATA AGQTTP TTP AGP TTP ATA AGQ
25 105 1,0 1 15 12025 105 1.0 1 15 120
Lys His Ala Glu Lys His Trp Phe Val Gly Leu Lys Lys Asn G1 y. Arg Ser Lys Leu GlyLys His Ala Glu Lys His Trp Phe Val Gly Leu Lys Lys Asn G1 y. Arg Ser Lys Leu Gly
AAP CAQ GCN GAP AAP CAQ TGG TTQ GTN GGN CTN AAP AAP AAQ GGN CGN TCN AAP CTN GGNAAP CAQ GCN GAP AAP CAQ TGG TTQ GTN GGN CTN AAP AAP AAQ GGN CGN TCN AAP CTN GGN
TTP AGP AGQ TTPTTP AGP AGQ TTP
125 130 135 ho.125 130 135 ho.
30 Pr® Arg Thr His Phe Gly Gin Lys Ala He Leu Phe Leu Pro Leu Pro Val Ser Ser Asp30 Pr® Arg Thr His Phe Gly Gin Lys Ala He Leu Phe Leu Pro Leu Pro Val Ser Ser Asp
CCN CGN ACN CAQ TTQ GGN CAP AAP GCN ATQ CTN TTQ CTN CCN CTN CCN GTN TCN TCN GAQCCN CGN ACN CAQ TTQ GGN CAP AAP GCN ATQ CTN TTQ CTN CCN CTN CCN GTN TCN TCN GAQ
AGP ATA TTP TTP TTP AGQ AGQAGP ATA TTP TTP TTP AGQ AGQ
hvor Q - C eller T,wherein Q - C or T,
35 P = A eller G, og N = A, T, C eller GP = A or G, and N = A, T, C or G
DK 175856 B1 7 ·DK 175856 B1 7 ·
Nukleotidsekvensen ifølge opfindelsen omfatter følgende egenskaber, codo-ner foretrukne af Escherichia coli og pattedyrs celler, hvor det muligt, eliminering af sekvenser med flere komplementariteter, inkorporering af unikke restriktionssteder genet igennem, terminale .restriktionsenzymklæbrige ender 5 for at lette indsætningen af genet i plasmider, et centralt lokaliseret unikt restriktionssted for at tillade sarnling af genet i to halvdele, fortrinsvist en N-terminal methionincodon som start for translation og tandem translation stopcodoner.The nucleotide sequence of the invention encompasses the following properties, codons preferred by Escherichia coli and mammalian cells, where possible, elimination of sequences with multiple complementarities, incorporation of unique restriction sites through the gene, terminal restriction enzyme sticky ends to facilitate insertion of the gene, a centrally located unique restriction site to allow the gene to be cleaved in two halves, preferably an N-terminal methionine codon as the start for translation and tandem translation stop codons.
lo Den efterfølgende beskrivelse og eksemplerne illustrerer den foreliggende opfindelse med hensyn til en særlig nukleotidsekvens for bovint aFGF, men den foreliggende opfindelse vil kunne omfatte en vilkårlig af de permutationer, der er oprenset i tabel I. Tabel II indeholder den foretrukne nukleotidsekvens: 15 8 DK 175856 B1The following description and examples illustrate the present invention with respect to a particular nucleotide sequence for bovine aFGF, but the present invention may comprise any of the permutations purified in Table I. Table II contains the preferred nucleotide sequence: 175856 B1
TABEL IITABLE II
TTCAATCTGCCACTGGGTAATTACAAAAAGCCAAAGCTTCTTTACTGCTCTAACG6TGGT 60 5 TACTTTCTCCGCATCCTGCCAGATGGTACCGTGGACGGCACCAAAGATCGTTCTGATCAA 120 10 CATATTCAACTGCAGCTGTGCGCCGAATCTATCGGTGAAGTTTACATCAAATCTACCGAA 180 15 ACTGGTCAATTCCTTGCCATGGACACTGATGGCCTGCTGTACGGATCCCAGACCCCAAAC 240 20 GAGGAGTGCCTTTTCCTGGAGCGCCTGGAGGAAAACCATTACAACACCTACATCTCTAAA 300 25 AAGCATGCTGAGAAACATTGGTTCGTAGGCCTTAAGAAAAATGGCCGCTCTAAACTGGGC 360 30 CCTCGTACTCACTTTGGTCAAAAAGCTATCCTGTTCCTGCCACTGCCAGTGAGCTCTGAC 420 35 9 DK 175856 B1TTCAATCTGCCACTGGGTAATTACAAAAAGCCAAAGCTTCTTTACTGCTCTAACG6TGGT 60 5 TACTTTCTCCGCATCCTGCCAGATGGTACCGTGGACGGCACCAAAGATCGTTCTGATCAA CATATTCAACTGCAGCTGTGCGCCGAATCTATCGGTGAAGTTTACATCAAATCTACCGAA 120 10 180 15 240 20 ACTGGTCAATTCCTTGCCATGGACACTGATGGCCTGCTGTACGGATCCCAGACCCCAAAC GAGGAGTGCCTTTTCCTGGAGCGCCTGGAGGAAAACCATTACAACACCTACATCTCTAAA AAGCATGCTGAGAAACATTGGTTCGTAGGCCTTAAGAAAAATGGCCGCTCTAAACTGGGC 300 25 360 30 420 35 9 CCTCGTACTCACTTTGGTCAAAAAGCTATCCTGTTCCTGCCACTGCCAGTGAGCTCTGAC DK 175856 B1
Genet konstrueres med en lederdel indeholdende et enkelt restriktionskløvningssted og en N-terminal methionincodon for et translationalt startsted.The gene is constructed with a leader moiety containing a single restriction cleavage site and an N-terminal methionine codon for a translational start site.
Genet indeholder også en hale indeholdende tandem translationale stopco-doner og to restriktionsenzymkløvningssteder. Den komplementære egen- .The gene also contains a tail containing tandem translational stop codons and two restriction enzyme cleavage sites. The complementary self.
5 skab for DNA tillader et valg af basesekvenser, som igen tillader inkorporering af unikke restriktionsenzymkløvningssteder fordelt i genet. Den foretrukne genbasesekvens med lokalisering af restriktionsenzymkløvningsstedeime er vist i tabel III: 10 DK 175856 B1DNA enclosure allows a selection of base sequences which in turn allows the incorporation of unique restriction enzyme cleavage sites distributed within the gene. The preferred gene base sequence with localization of restriction enzyme cleavage step is shown in Table III: 10 DK 175856 B1
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Gensekvensen for hver streng af det dobbeltstrengede molekyle er tilfældigt delt i 8 nukleotidsekvenser. Oligonukleotiderne er konstrueret med overlappende ender for at tillade dannelse af den dobbeltstrengede DNA. Følgende tabel indeholder en af de flere mulige oligonukleotidarrangementer, der an-5 vendes til fremstilling af det bovine aFGF gen.The gene sequence of each strand of the double-stranded molecule is randomly divided into 8 nucleotide sequences. The oligonucleotides are constructed with overlapping ends to allow formation of the double-stranded DNA. The following table contains one of the several possible oligonucleotide arrangements used to prepare the bovine aFGF gene.
TABEL IVTABLE IV
10 01IG0-1 10 20 30 40 50 S8 5' AATTCATGTT CAATCTGCCA CTGGGTAATT ACAAAAAGCC AAAGCTtCTT FACTGCTC 3' 15 OLIGO-2 10 20 30 40 45 5' AGAAGCTTTG GCTTTTTGTA ATTACCCAGT GGCAGATTGA ACATG 3' OLIGO-3 10 20 30 40 50 60 S' TAACGGTGGT TACTTTCTCC GCATCCTGCC AGATGGTACC GTGGACGGCA CCAAAGATCG 3* 20 OLIGO-4 10 20 30 40 50 59 5* TGCCGTCCAC GGTACCATCT GGCAGGATGC GGAGAAAGTA ACCACCGTTA GAGCAGTAA 3' 0LIG0-5 10 20 30 40 46 5' TTCTGATCAA CATATTCAAC FGCAGCTGTG CGCCGAATCT ATCGGT 3* 25 01IG0-6 10 20 30 40 50 60 65 5' GTAAACTTCA CCGATAGATT CGGCGCACAG CTGCA6TTGA ATATGTTGAT CAGAACGATC TTTGG 3’10 01IG0-1 10 20 30 40 50 S8 5 'AATTCATGTT CAATCTGCCA CTGGGTAATT ACAAAAAGCC AAAGCTtCTT FACTGCTC 3' 15 OLIGO-2 10 20 30 40 45 5 'AGAAGCTTTG GCTTTTTGTA ATTACCCAGT GGCAGATTGGGGGAGGT TACT TEXT TO CTA. 30 40 50 60 65 5 'GTAAACTTCA CCGATAGATT CGGCGCACAG CTGCA6TTGA ATATGTTGAT CAGAACGATC TTTGG 3'
OlIGO-7 10 20 30 40 50 60 67 3° 5' GAAGTTTACA TCAAATCTAC CGAAACTGGT CAATTCCTTG CCATGGACAC TGATGGCCTG CTGTACG 3· 35 13 DK 175856 B1 } TABEL IV (fortsat) 5 01IG0-8 10 20 30 40 50 60 62 5* GATCCGTACA GCAGGCCATC AGTGTCCATG GCAAGGAATT GACCAGTTTC GGTAGAfTTG At 3· 0LIG0-9 10 20 30 40 50 S2 5' GATCCCAGAC CCCAAACGAG GAGTGCCTTT TCCTGGAGCG CCTGGAGGAA AA 3* 10 OLIGO-IO 10 20 30 40 50 58 5’ GTTGTAATGG TTTTCCTCCA GGCGCTCCAG GAAAAGGCAC TCCTCGTTTG GGGTCTGG 3‘ j OLIGO-11 10 20 30 40 48 5' CCATTACAAC ACCTACATCT CTAAAAAGCA TGCTGAGAAA CATTGGTT 3' 15 0LIG0-12 10 20 30 40 46 S' GGCCTACGAA CCAATGTTTC TCAGCATGCT TTTTAGAGAT GTAGGT 3* OLIGO-13 10 20 30 40 50 53 5' CGTAGGCCTT AAGAAAAATG GCCGCTCIAA ACTGGGCCCT CGTACTCACT TTG 3* 20 OUGO-14 10 20 39 40 50 55 ♦ 5’ GCTTTTTGAC CAAAGTGAGT AC6AGGGCCG AGTTTAGAGC GGCCATTTTT CTTAA 3' OLIGO-15 10 20 30 40 50 56 25 5* 6TCAAAAAGC TATCCTGTTC CTGCCACTGC CAGTGAGCTC TGACTAATAG ATATCG 3' 01IG0-16 10 20 30 40 50 5’ TCGACGATAT CTATTAGTCA GAGCTCACTG GCAGTGGCAG GAACAGGATA 3' 30OlIGO-7 10 20 30 40 50 60 67 3 ° 5 'GAAGTTTACA TCAAATCTAC CGAAACTGGT CAATTCCTTG CCATGGACAC TGATGGCCTG CTGTACG 3 · 35 13 DK 175856 B1} TABLE IV (continued) 5 01IG0-8 10 20 30 40 50 60 62 ACGG GAGGTATATA GAGGTATTATAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG! 20 30 40 48 5 'CCATTACAAC ACCTACATCT CTAAAAAGCA TGCTGAGAAA CATTGGTT 3' 15 0LIG0-12 10 20 30 40 46 S 'GGCCTACGAA CCAATGTTTC TCAGCATGCT TTTTAGAGAT GTAGGT 3 * OLIGO-13 10 20 30 40G 20 OCT-14 10 20 39 40 50 55 ♦ 5 'GCTTTTTGAC CAAAGTGAGT AC6AGGGCCG AGTTTAGAGC GGCCATTTTT CTTAA 3' OLIGO-15 10 20 30 40 50 56 25 5 * 6TCAAAAAGC TATCCTGTTC CTGCCACTGC CAGTGAGC 01 'TCGACGATAT CTATTAGTCA GAGCTCACTG GCAGTGGCAG GAACAGGATA 3 '30
De i tabel IV viste oligonukleotider præsenteres blot som et eksempel på oli-gonukleotidunderenheder og skal ikke betragtes som begrænset dertil. Den sammensatte basesek- vens, der viser overlapning og arrangement af oligo-nukleotiderne, er vist i tabel III.The oligonucleotides shown in Table IV are presented merely as an example of oligonucleotide subunits and should not be considered limited thereto. The composite base sequence showing overlap and arrangement of the oligonucleotides is shown in Table III.
35 14 .35 14.
DK 175856 B1DK 175856 B1
Det bovine gen samles i to trin: først den halvdel, der svarer til den N-terminale del af proteinet, og dernæst som den anden C-terminale halvdel. Generelt kinaseres oligonukleotideme med T4 polynukleotidkinase i nærværelse af enten APT eller 32P-mærket ATP. I første reaktion i hvert trin kinase-5 res de oligonukleotider, som udgør den ene streng af genet, med undtagelse · af det meste 5'-oligonukleotid. I den anden reaktion kinaseres oligonukleoti-derne, som udgør den anden streng, med undtagelse af det meste 5'-oligonukleotid. Når kinaserede oligonukleotider anvendes, tilsættes ca. 1 pmol af det 32P-mærkede oligonukleotid til senere identificering af produkter-10 ne. Spændingsudligning udføres i en passende puffer, såsom en indeholdende, men ikke begrænset til, ca. 60 mM Tris, ca. pH 7,6, ca. 5 mM dithiothreitol (DTT), ca. 10 mM MgCfe og cå. 30 μΜ ATP ved ca. 90 °C i ca.The bovine gene is assembled in two steps: first the half corresponding to the N-terminal part of the protein, and then the second C-terminal half. Generally, the oligonucleotides are kinase with T4 polynucleotide kinase in the presence of either APT or 32P-labeled ATP. In the first reaction of each step, the oligonucleotides that make up one strand of the gene are kinase except for most 5 'oligonucleotide. In the second reaction, the oligonucleotides constituting the second strand are kinase, with the exception of most 5 'oligonucleotide. When kinased oligonucleotides are used, ca. 1 pmol of the 32P-labeled oligonucleotide for later identification of the products. Voltage equalization is performed in a suitable buffer, such as one containing, but not limited to, approx. 60 mM Tris, approx. pH 7.6, approx. 5 mM dithiothreitol (DTT), ca. 10 mM MgCfe and co. 30 μΜ ATP at approx. 90 ° C for approx.
4 minutter efterfulgt af en hurtig overføring til ca. 60 °C og en hurtig afkøling til ca. 30 °C. Ugering udføres i en passende puffer, såsom en indeholdende, 15 men ikke begrænset til, ca. 60 mM Tris, ca. pH 7,6, ca. 10 mM DTT, ca. 10 mM MgCfe, ca. 30 μΜ ATP og ca. 0,03 enheder T4 DNA ligase ved ca. 20 °C i ca. 1,5 time.4 minutes followed by a quick transfer to approx. 60 ° C and a rapid cooling to approx. 30 ° C. Ugering is carried out in a suitable buffer, such as one containing, but not limited to, approx. 60 mM Tris, approx. pH 7.6, approx. 10 mM DTT, approx. 10 mM MgCfe, ca. 30 μΜ ATP and approx. 0.03 units of T4 DNA ligase at ca. 20 ° C for approx. 1.5 hours.
De ligerende oligonukleotider renses ved polyacrylamidgelelektrophorese ef-20 terfulgt af et ethanoludfældning. Oligonukleotideme genopløses i en puffer indeholdende ca. 20 μΙ ca. 80%’s formamid, ca. 50 mM Tris-borat, ca. pH 8,3, ca. 1 mM ethylendiamintetraeddikesyre (EDTA), ca. 0,1% efter vægt/vol. xylencyanol og ca. 0,1 % efter vægt/vol. bromphenolblåt. Hver prøve opvarmes ved ca. 90 °C i ca. 3 minutter og elektrophoreseres i en ca. 10%’s urin-25 stof-polyacrylamidgel ved ca. 75 Watt i ca. 5 timer. De 231 base N-terminale bånd fjernes, kombineres og elueres ved ca. 4 °C i ca. 0,5 M ammoniumacetat indeholdende ca. 1 mM EDTA ved ca. pH 8. De 209 base C-terminale bånd behandles på samme måde.The ligating oligonucleotides are purified by polyacrylamide gel electrophoresis followed by an ethanol precipitate. The oligonucleotides are redissolved in a buffer containing ca. 20 µΙ approx. 80% formamide, ca. 50 mM Tris-borate, ca. pH 8.3, approx. 1 mM ethylenediaminetetraacetic acid (EDTA), ca. 0.1% by weight / vol. xylenesanol and approx. 0.1% by weight / vol. bromophenol. Each sample is heated at approx. 90 ° C for approx. 3 minutes and electrophoresed in a ca. 10% urea-polyacrylamide gel at approx. 75 watts for approx. 5 hours. The 231 base N-terminal bands are removed, combined and eluted at ca. 4 ° C for approx. 0.5 M ammonium acetate containing approx. 1 mM EDTA at approx. pH 8. The 209 base C-terminal bands are treated in the same way.
30 De syntetiserede gensekvenser, som koder for enten den N-terminale eller den C-terminale del af aFGF inkorporeres i pBR322 plasmidet. Det er særligt ønsket og tilsigtet, at der af opfindelsen omfattes anvendelsen af andre plasmider, i hvilke aFGF genet kan inkorporeres, og som vil tillade ekspression af aFGF genet. Genspændingsudlignede oligonukleotider, ca. 300 fmol 35 og ca. 100 fmol af den udvundne 231 basepar N-terminale ende ligeres hver især til ca. 100 fmol agarosegel renset ca. 3,9 kilobase (kb) EcoRI-BamHIThe synthesized gene sequences encoding either the N-terminal or the C-terminal portion of aFGF are incorporated into the pBR322 plasmid. It is particularly desired and intended that the invention encompass the use of other plasmids into which the aFGF gene can be incorporated and which will allow expression of the aFGF gene. Voltage-equalized oligonucleotides, ca. 300 fmol 35 and approx. 100 fmol of the recovered 231 base pair N-terminal end are each ligated to ca. 100 µmol agarose gel purified approx. 3.9 kilobase (kb) EcoRI-BamHI
15 DK 175856 B1 pBR322 for den N-terminale ende. Den 209 bp C-terminale ende konstrueres på samme måde under anvendelse af BamHI-Sall pBR322. Ligering udføres i en puffer indeholdende ca. 20 mM Tris, ca. pH 7,8, ca. 1 mM DTT, ca. 10 mM MgCl2, ca. 0,4 mM ATP, med ca. 1 enhed T4 DNA ligase i ca. 1 5 time ved ca. 20 °C. Hver halvgen ligeret vektor anvendes til at transformere kompetente bakterieceller, såsom E. coli RR1 (Bethesda Research Laboratories, BRL), idet man følger leverandørens procedurer. De transformerede celler vælges for vækst i ampicillin og screenes for tilstedeværelsen af enten den 231 basepar (bp) EcoRI-BamHI indsat eller den 209 bp BamHI-Sall ind-10 sat ved restriktionsanalyse af minilysat plasmidpræparationer. DNA sekvensen for kloner indeholdende en indsats med en passende størrelse, bestemmes under anvendelse af Maxam og Gilbert, Proc. Natl. Acad. Sci. USA 74:560-564 (1977) kemisk DNA sekvenstekriik.15 DK 175856 B1 pBR322 for the N-terminal end. The 209 bp C-terminal end is constructed similarly using BamHI-SalI pBR322. Ligation is performed in a buffer containing ca. 20 mM Tris, ca. pH 7.8, approx. 1 mM DTT, approx. 10 mM MgCl2, ca. 0.4 mM ATP, with approx. 1 unit of T4 DNA ligase for approx. 1 5 hours at approx. 20 ° C. Each half-ligated vector is used to transform competent bacterial cells, such as E. coli RR1 (Bethesda Research Laboratories, BRL), following the supplier's procedures. The transformed cells are selected for growth in ampicillin and screened for the presence of either the 231 base pair (bp) EcoRI-BamHI inserted or the 209 bp BamHI-SalI inserted by restriction analysis of minilysate plasmid preparations. The DNA sequence for clones containing an insert of an appropriate size is determined using Maxam and Gilbert, Proc. Natl. Acad. Sci. USA 74: 560-564 (1977) Chemical DNA Sequence Technique.
15 Det endelige fuldlængde, syntetiske aFGF gen blev klonet véd kløvning af den N-terminale halvklon med restriktionsenzymer BamHI og Sall, behandling med alkalisk phosphatase og ligering deraf til den gelrensede 209 bp BamHI-Sall indsat af den C-terminale halvklon. Dette ligerede materiale blev anvendt til at transformere kompetente RR1 celler som før.The final full length synthetic aFGF gene was cloned by cleavage of the N-terminal half-clone with restriction enzymes BamHI and SalI, treatment with alkaline phosphatase and ligation thereof to the gel-purified 209 bp BamHI-SalI inserted by the C-terminal half-clone. This ligated material was used to transform competent RR1 cells as before.
2020
Ekspression af det syntetiske aFGF gen følges af en række forskellige promotor-ekspressions systemer. Det er ønsket og tilsigtet, at der i opfindelsen omfattes anvendelse af andre promotor-ekspressions systemer til ekspression af det intakte aFGF gen. Den foretrukne konstruktion gør brug af E. coli 25 tac promotor, en hybrid mellem områder af trp promotoren og.lac promotoren som beskrevet af deBoer et al., Proc. Nat. Acad. Sci. USA 80:21-25 (1983). Plasmid pKK 223-3 (Pharmacia), som indeholder tac promotoren og rmB rRNA transskriptionsterminatoren, blev modificeret til fjernelse af det pBR322-afledte Sall restriktionsenzymsted. rmB rRNA terminatoren har vist 30 at tillade ekspression ved stærke promotorer, Gentz et al., Proc. Natl. Acad.Expression of the synthetic aFGF gene is followed by a variety of promoter expression systems. It is desired and intended that the invention encompass the use of other promoter expression systems for expression of the intact aFGF gene. The preferred construct uses the E. coli tac promoter, a hybrid between regions of the trp promoter and the lac promoter as described by deBoer et al., Proc. Night. Acad. Sci. USA 80: 21-25 (1983). Plasmid pKK 223-3 (Pharmacia), which contains the tac promoter and rmB rRNA transcription terminator, was modified to remove the pBR322-derived SalI restriction enzyme site. The rmB rRNA terminator has been shown to allow expression by strong promoters, Gentz et al., Proc. Natl. Acad.
Sci. USA 78:4936-4940 (1981); Brosius, Gene 27:161-172 (1984).Sci. USA 78: 4936-4940 (1981); Brosius, Gene 27: 161-172 (1984).
pKK223-3 plasmid DNA kløves med restriktionsenzymer til fremstilling af "et 2,7 kb DNA fragment til dannelse af klon pKK 2,7. Det syntetiske aFGF gen 35 kløves fra dets pBR322 vektor og overføres til pKK 2,7 plasmidet efter restriktion af pKK 2,7 med EcoRI og Sall. Den resulterende rekombinant, der 16 DK 175856 B1 er vist i fig. 1, transformeres over i E. coli JM105 (Pharmacia) eller DH5 (BRL) celler og udtrykkes.pKK223-3 plasmid DNA is cleaved with restriction enzymes to produce a 2.7 kb DNA fragment to generate clone pKK 2.7. The synthetic aFGF gene 35 is cleaved from its pBR322 vector and transferred to the pKK 2.7 plasmid after restriction by pKK 2.7 with EcoRI and SalI.The resulting recombinant shown in Figure 1 is transformed into E. coli JM105 (Pharmacia) or DH5 (BRL) cells and expressed.
Stedspecifik mutagenese er en effektiv måde til at overføre aminosyrese-5 kvensen fra en pattedyrart af aFGF til aFGF aminosyresekvens fra en anden art. Den følgende beskrivelse angår den stedspecifikke mutagene overføring af bovint aFGF, 140 aminosyreform til humant aFGF, idet det må forstås, at processen kan anvendes til at overføre en vilkårlig pattedyrart aFGF til aFGF fra en anden art. Den eneste begrænsning på overføringen er, at aminosyre 10 sekvensen for begge aFGFer må være kendt. Den efterfølgende tabel angiver de aminosyrer, som må udskiftes, og lokaliseringen på det bovine aFGF aminosyrekort, tabel III, hvor substitutionerne foretages: TABEL V__· _Site-specific mutagenesis is an effective way to transfer the amino acid sequence from a mammalian species of aFGF to aFGF amino acid sequence of another species. The following description relates to the site-specific mutagenic transfer of bovine aFGF, 140 amino acid form to human aFGF, it being understood that the process can be used to transfer any mammalian aFGF to aFGF from another species. The only restriction on the transfer is that the amino acid 10 sequence of both aFGFs must be known. The following table lists the substituted amino acids and the location on the bovine aFGF amino acid map, Table III, where the substitutions are made: TABLE V__
Aminosyre Substituerede aminosyrer for_ lokalisering_ humant aFGF_ bovint aFGF_ 5_Pro_Leu_ 21_Jjis_Tyr__ 35_Arg_Lys _ 47_Ser_Cys_ 51_Val_Jle__ 64_Tyr_Phe _ 106_Asn ._His_ 116 _Ser_Arg__ 117 _Cys_Ser_ 119_Arg_Leu_ 125_Tyr_Phe_ 15 20 17 DK 175856 B1Amino acid Substituted amino acids for_location_ human αFGF_ bovine αFGF_ 5_Pro_Leu_ 21_Jjis_Tyr__ 35_Arg_Lys _ 47_Ser_Cys_ 51_Val_Jle__ 64_Tyr_Phe _ 106_Asn ._His_ 116 _Ser_Ar_Ar_Ar_Ar
TABEL VITABLE VI
OUGO-1 5' CTGCCACCGGGTAATTAC 3‘ 5 OLIGO-2 5’CGGTGGTCACTTTCTCCG 3’ OUGO-3 5’ CGGCACCAGAGATCGTTC 3' OUGO-4 5' GCAGCTGTCCGCCGAATCTGTCGGTGAAG 3’ OLIGO-5 5' CT66TCAATACCTTGCCATGG 3’ OLIGO-6 10 5’ GCTGAGAAAAATTGGTTC6 3' OLIGO-7 5’ GGCCGCGTTTACAGCTGCCA11 111CTTAAGG 3' OLIGO-8 5’ CGTACTCACTATGGCCAAAAAGCTATCC 3' 15OLIGO-1 5 'CTGCCACCGGGTAATTAC 3' OLIGO-2 5 5'CGGTGGTCACTTTCTCCG 3 'OLIGO-3 5' CGGCACCAGAGATCGTTC 3 'OLIGO-4 5' GCAGCTGTCCGCCGAATCTGTCGGTGAAG 3 'OLIGO-5 5' CT66TCAATACCTTGCCATGG 3 'OLIGO-6 10 5' GCTGAGAAAAATTGGTTC6 3 ' OLIGO-7 5 'GGCCGCGTTTACAGCTGCCA11 111CTTAAGG 3' OLIGO-8 5 'CGTACTCACTATGGCCAAAAAGCTATCC 3' 15
Som med den bovine gensekvens konstrueres 8 oligonukleotider repræsenterende den humane gensekvens ved samme procedure som den, der blev anvendt for de bovine oligonukleotider. Tabel VI indeholder en af flere oligo-nukleotidarrangementer, der anvendes , til at producere det humane aFGF 20 gen.As with the bovine gene sequence, 8 oligonucleotides representing the human gene sequence are constructed by the same procedure as that used for the bovine oligonucleotides. Table VI contains one of several oligonucleotide arrangements used to produce the human aFGF 20 gene.
Det klonede syntetiske bovine gen for aFGF overføres til et humant syntetisk gen for aFGF ved en række dirigerede punktmutationer. Oligonukleotid-dirigeret mutagenese af det klonede gen tillader ændringer af basesekven-25 sen for bovin aFGF, så den resulterende aminosyresekvens indeholder de substituerede aminosyrer, der er vist i tabel V, og er human aFGF. Til fremstilling af den humane 139 aminosyre mikroheterogene form for aFGF fjernes den aminoterminale phenylalanin ved en sletning foretaget i det bovine gen. En punktmutation udføres for at erstatte asparagin i den anden stilling 30 med aspartinsyre. Alternativt deamideres asparaginen til aspartinsyre. Metoderne til udførelse af disse procedurer er beskrevet i det følgende og kendt i teknikken. Den oligonukleotid-dirigerede mutagenese udføres under anvendelse af standardprocedurer kendt i teknikken, Zoller og Smith, Methods in Enzymology, 100:468-500 (1983); Norris et al., Nukleic Acids Research, 35 11:5103-5112 (1983) og Zoller og Smith, DNA, 3:479-488 (1984). Punktmu tationerne udført ved standardiseret oligonukleotid-dirigeret mutagenese er 18 DK 175856 B1 vist i den efterfølgende tabel Vil. Lokaliseringen af basemutagenesen kan ses i tabel III. Punktmutationerne er kun vist som et eksempel på ændringer, som vil resultere i det humane aFGF gen, og skal ikke betragtes som begrænsende.The cloned synthetic bovine gene for aFGF is transferred to a human synthetic gene for aFGF by a series of directed point mutations. Oligonucleotide-directed mutagenesis of the cloned gene allows modification of the base sequence of bovine aFGF so that the resulting amino acid sequence contains the substituted amino acids shown in Table V and is human aFGF. To prepare the human 139 amino acid microheterogeneous form of aFGF, the amino terminal phenylalanine is removed by a deletion in the bovine gene. A point mutation is performed to replace asparagine at the second position 30 with aspartic acid. Alternatively, the asparagine is deamidated to aspartic acid. The methods for performing these procedures are described below and known in the art. The oligonucleotide-directed mutagenesis is performed using standard procedures known in the art, Zoller and Smith, Methods in Enzymology, 100: 468-500 (1983); Norris et al., Nucleic Acids Research, 11: 5103-5112 (1983) and Zoller and Smith, DNA, 3: 479-488 (1984). The point mutations performed by standardized oligonucleotide-directed mutagenesis are shown in the following Table Vil. The location of the base mutagenesis can be seen in Table III. The point mutations are shown only as an example of changes that will result in the human aFGF gene and should not be considered as limiting.
55
TABEL VIITABLE VII
Base Substitueret base for_Tilsvarende lokalisering_humant aFGF bovint aFGF_human aminosyre 22_C_T_Pro 69_C_T _His 112_G_ A _Arg 148_C___G_Ser 159_G_A_Val_ 199_A_T_ Tyr_ 324_A C_ Asn_ 354_A_C_Ser_ 358 G C Cys 364 _G_T_Arg__ 365 _C_G_Arg_ 382 |a [t TyrBase Substituted base for corresponding localization_humant aFGF bovine aFGF_human amino acid 22_C_T_Pro 69_C_T _His 112_G_ A _Arg 148_C___G_Ser 159_G_A_Val_ 199_A_T_ Tyr_ 324_A C_ Asn_ 35_G C_ As__
Ekspressionskloneme dyrkes ved ca. 37 °C i et passende vækstmedium, som består af ca. 1% trypton, ca. 0,5% gær ekstrakt, ca. 0,5% NaCI, ca. lo 0,4% glukose og ca. 50 pg/ml ampicillin. Når den optiske densitet ved 550 nm når ca. 0,5, kan isopropyl-p-D-thioglactopyranosid (IPTG) tilsættes til en slutkoncentration på ca. 1 mM, og væksten fortsættes ved ca. 37 °C i ca. 3 timer. Cellerne fra 1 liter dyrkningsmedium høstes ved centrifugering og genopløst i en afbrydelsespuffer indeholdende ca. 10 mM natriumphosphat 15 ved ca. pH 7,2, ca. 5 mM EDTA, ca. 10,6 pg/ml N-p-toluensulfonyl-L-phenylalanin-chlormethylketon (TPCK), ca. 34,3 pg/mlk pepstatin A, ca. 87 pg/ml phenylmethylsulfonylfluorid (PMSF), ca. 15 pg/ml bovin pancreatisk trypsininhibitor (BPTI) og ca. 25,2 pg/ml leupeptin. Celler brydes enten fra eller fryses og opbevares ved -70 °C og brydes straks efter optøning ved ca.The expression clones are grown at ca. 37 ° C in a suitable growth medium consisting of ca. 1% tryptone, approx. 0.5% yeast extract, approx. 0.5% NaCl, approx. lo 0.4% glucose and approx. 50 µg / ml ampicillin. When the optical density at 550 nm reaches approx. 0.5, isopropyl-β-D-thioglactopyranoside (IPTG) can be added to a final concentration of approx. 1 mM and growth is continued at approx. 37 ° C for approx. 3 hours. The cells from 1 liter of culture medium are harvested by centrifugation and redissolved in a disruption buffer containing ca. 10 mM sodium phosphate 15 at approx. pH 7.2, approx. 5 mM EDTA, ca. 10.6 pg / ml N-p-toluenesulfonyl-L-phenylalanine chloromethyl ketone (TPCK), approx. 34.3 pg / mlk pepstatin A, ca. 87 pg / ml phenylmethylsulfonyl fluoride (PMSF), ca. 15 pg / ml bovine pancreatic trypsin inhibitor (BPTI) and approx. 25.2 pg / ml leupeptin. Cells are either disrupted or frozen and stored at -70 ° C and disrupted immediately after thawing at ca.
19 DK 175856 B1 tre passager gennem en Fransk trykcelle ved ca. 12.000 psi ved ca. 4 °C.19 DK 175856 B1 three passages through a French pressure cell at approx. 12,000 psi at approx. 4 ° C.
Den overliggende væske samles ved centrifugering.The supernatant is collected by centrifugation.
Den rekombinanten aFGF renses til homogenisitet ved en unik totrinskroma-5 tografisk procedure, der gør brug af kombination af heparin/Sepharose^· affinitetskromatografi efterfulgt af omvendt faset HPLC. Den rå r-aFGF anbringes på en heparin/Sepharose-søjle i en fortyndet puffer, såsom ca. 10 mM phosphat eller Tris, ca. pH 6-8, som derefter vaskes med en opløsning med lav saltkoncentration, såsom ca. 0,8 M NaCI, indtil absorbansen ved 10 280 nm falder til ca. baggrundsabsorbansen. r-aFGF elueres derpå med en buffer opløsning med høj saltkoncentration, såsom ca. 10 mM na-triumphosphat eller Tris, ca. pH 6-8, indeholdende ca. 1,5 M NaCI. Eluatet renses derpå ved omvendt faset HPLC på en harpiks bestående af kovalent bundne alkylsilankæder med alkylgrupper med 3-18 carbonatomer, fortrins-15 vist 4 carbonatomer. r-aFGF påføres direkte HPLC-søjlen bragt i ligevægt i en fortyndet syre, såsom ca. 10 mM trifluoreddikesyre, eddikesyre eller phosphorsyre og elueret med en lineær gradient organisk opløsningsmiddel, såsom acetonitril eller ethanol. Bovint hjerne-afledt aFGF blev tidligere beskrevet som bindende til såvel heparin/Sepharose-søjter som til omvendtfa-20 sede HPLC-søjler, jævnfør Maciag et al., Science 225:932-935 (1984) og Thomas et al., Proc. Natl. Acad. Sci. USA 81:357-361 (1984) som del af flertrins rensninger. Til dels baseret på den relative høje mængde r-aFGF i bak-terielysater vises disse to trin alene at være tilstrækkelige til at opnå homogent rent r-aFGF med ca. 16.000 daltons som bestemt ved elektrophorese i 25 polyacrylamidgeler. Disse to trin alene giver ikke rent aFGF fra hjernen.The recombinant aFGF is purified for homogeneity by a unique two-step chromatographic procedure using heparin / Sepharose® affinity chromatography combination followed by reverse-phase HPLC. The crude r-aFGF is placed on a heparin / Sepharose column in a diluted buffer such as ca. 10 mM phosphate or Tris, ca. pH 6-8 which is then washed with a low salt solution such as ca. 0.8 M NaCl until the absorbance at 10 280 nm drops to approx. background absorbance. r-aFGF is then eluted with a high salt buffer solution, such as ca. 10 mM sodium phosphate or Tris, ca. pH 6-8, containing approx. 1.5 M NaCl. The eluate is then purified by reverse-phase HPLC on a resin consisting of covalently bonded alkyl silane chains having alkyl groups of 3-18 carbon atoms, preferably 4 carbon atoms. r-aFGF is directly applied to the equilibrated HPLC column in a dilute acid such as ca. 10 mM trifluoroacetic acid, acetic acid or phosphoric acid and eluted with a linear gradient organic solvent such as acetonitrile or ethanol. Bovine brain-derived aFGF was previously described as binding to both heparin / Sepharose suits and to reverse-phase HPLC columns, cf. Maciag et al., Science 225: 932-935 (1984) and Thomas et al., Proc. Natl. Acad. Sci. USA 81: 357-361 (1984) as part of multi-stage purifications. In part, based on the relatively high amount of r-aFGF in bacterial lysates, these two steps alone appear to be sufficient to obtain homogeneously pure r-aFGF by ca. 16,000 daltons as determined by electrophoresis in 25 polyacrylamide gels. These two steps alone do not produce pure aFGF from the brain.
Mitogenaktivitet af den rensede aFGF bestemmes ved inkorporering af 3H-thymidin i DNA med celleliniefibroblaster, fortrinsvist BALB/c 3T3 A31 (American Type Culture Collection). Den rekombinante aFGF viser et spidsre-30 spons ved ca. 1 ng protein eller mindre pr. ml i den fibroblaststimulerende prøve.Mitogenic activity of the purified aFGF is determined by incorporation of 3 H-thymidine into DNA with cell line fibroblasts, preferably BALB / c 3T3 A31 (American Type Culture Collection). The recombinant aFGF shows a peak response at ca. 1 ng of protein or less per ml in the fibroblast stimulating sample.
En anden udførelsesform for opfindelsen er en metode til at fremme helingen af sår ved påføring af det hidtil ukendte peptid, enten med eller uden 35 heparin, fortrinsvist med heparin, ca. 1 til ca. 500 pg/cm2 til sårområdet enten 20 DK 175856 B1 topisk eller subkutant i såret i en mængde på ca. 0,1 til 100 pg/cm2 af overflade til topisk anvendelse.Another embodiment of the invention is a method of promoting wound healing by application of the novel peptide, either with or without 35 heparin, preferably with heparin, ca. 1 to approx. 500 µg / cm2 to the wound area either 20 topically or subcutaneously in the wound in an amount of approx. 0.1 to 100 µg / cm 2 of surface for topical application.
Til påføring er forskellige farmaceutiske formuleringer nyttige, såsom salver, 5 pastaer, opløsninger, geler, faste vandopløselige polymere, såsom albuminer, gelatiner, hydroxypropylcellulose, pluronics, tetronics eller alginater, hvori den aktive bestanddel inkorporeres i mængder på ca. 1 til ca. 100 pg/ml.For application, various pharmaceutical formulations are useful, such as ointments, pastes, solutions, gels, solid water-soluble polymers such as albumins, gelatins, hydroxypropyl cellulose, pluronics, tetronics or alginates wherein the active ingredient is incorporated in amounts of approx. 1 to approx. 100 µg / ml.
10 aFGFs evne til at stimulere heling i forskellige celletyper, herunder fi-broblaster, vaskulære og corneale endotheliale celler og lignende gør disse peptider nyttige som farmaceutiske midler. Disse forbindelser kan anvendes til at behandle sår hos pattedyr, herunder mennesker, ved administrering af hidtil ukendt r-aFGF til patienter med behov for sådan behandling.The ability of aFGF to stimulate healing in various cell types, including fibroblasts, vascular and corneal endothelial cells, and the like, makes these peptides useful as pharmaceutical agents. These compounds can be used to treat wounds in mammals, including humans, by administering novel r-aFGF to patients in need of such treatment.
1515
Opfindelsen forklares nærmere ved hjælp af de efterfølgende eksempler. EKSEMPEL 1 20 OligonukleotidsynteseThe invention is further explained by the following examples. EXAMPLE 1 Oligonucleotide Synthesis
Oligonukleotider blev syntetiseret efter den teknik, der er beskrevet af Mat-teucci og Cauthers i J.A. Chem. Soc. 103:3185-3191 (1981) og af Beaucage og Caruthers i Tetrahedron Letters 22:1859-1862 (1981). Basesekvenseme for de syntetiserede oligonukleotider er vist i tabel IV.Oligonucleotides were synthesized according to the technique described by Mat-teucci and Cauthers in J.A. Chem. Soc. 103: 3185-3191 (1981) and by Beaucage and Caruthers in Tetrahedron Letters 22: 1859-1862 (1981). The base sequences of the synthesized oligonucleotides are shown in Table IV.
25 EKSEMPEL 2 Samling af aFGF genetEXAMPLE 2 Collection of the aFGF gene
Oligonukleotideme fra eksempel 1 blev samlet som to separate enheder, 30 den N-terminale halvdel (231 bp) og den C-terminale halvdel (209 bp). De halvdele blev derpå kombineret for at gøre det syntetiske gen intakt, se tabel III. Til at begynde med blev oligonukleotideme kinaseret i følgende reaktionsblanding: 70 mM Tris pH 7,6, 5 mM DTT, 10 mM MgCfe, 33 pM ATP, 0,3 enheder T4 polynukleotid pr. pliter. Blandingen blev inkuberet i 1,5 timer ved 35 37 0C og derpå endnu 1 time efter supplering af blandingen med 0,2 enhe- der/pliter kinase og ATP til opnåelse af en koncentration på 100 mM. Til ra- 21 DK 175856 B1 dioaktiv mærkning indeholdt den oprindelige blanding 37 nCi/pliter [y-32P]-ATP.The oligonucleotides of Example 1 were pooled as two separate units, the N-terminal half (231 bp) and the C-terminal half (209 bp). The halves were then combined to make the synthetic gene intact, see Table III. Initially, the oligonucleotides were kinased in the following reaction mixture: 70 mM Tris pH 7.6, 5 mM DTT, 10 mM MgCfe, 33 µM ATP, 0.3 units T4 polynucleotide per ml. microliters. The mixture was incubated for 1.5 hours at 35 ° C and then another 1 hour after supplementing the mixture with 0.2 units / liter kinase and ATP to give a concentration of 100 mM. For radiolabelling, the original mixture contained 37 nCi / pliter [γ-32P] -ATP.
Spændingsudligningen og ligeringerne blev foretaget i to separate reaktio-5 ner. I hver reaktion blev 100 pmol af hver af de 8 oligonukleotider tilsat. I en reaktion blev de oligonukleotider, som udgør en streng af den C-terminale eller N-terminale halvdel af genet, kinaseret med undtagelse af 5'-oligonukleotidet. I den anden reaktion blev de oligonukleotider, som udgør den modsatte streng, kinaseret, igen med undtagelse af 5'-oligonukleotidet. I 10 hver reaktion blev der således kinaseret 3 oligonukleotider, og 5 oligonukleo-tid blev ikke kinaseret. Når kinaserede oligonukleotider blev anvendt, blev 1 pmol af det 32P-mærkede oligonukleotid også tilsat til senere identificering af . produkterne. Hver reaktion indeholdt 200 pliter 70 mM Tris pH 7,6, 5 mM DTT, 10 mM MgCtø og 30 pM ATP. Oligonukleotideme blev udlignet ved op-15 varmning til 90 °C i 4 minutter, hvorpå reaktionen straks blev overført til 60 0C og fik lov at afkøle langsomt til 30 °C. Ligering blev foretaget i 400 pliter indeholdende 60 mM Tris pH 7,6, 10 mM DTT, 10 mM MgCfe, 1 mM ATP og 0,03 enheder T4 DNA ligase pr. pliter ved inkubering ved 20 °C i 1,5 timer.The stress equalization and ligations were made in two separate reactions. In each reaction, 100 pmol of each of the 8 oligonucleotides was added. In one reaction, the oligonucleotides which form a strand of the C-terminal or N-terminal half of the gene were kinated with the exception of the 5 'oligonucleotide. In the second reaction, the oligonucleotides that make up the opposite strand were kinased, again with the exception of the 5 'oligonucleotide. Thus, in 10 each reaction, 3 oligonucleotides were kinased and 5 oligonucleotides were not kinased. When kinased oligonucleotides were used, 1 pmol of the 32 P-labeled oligonucleotide was also added for later identification. products. Each reaction contained 200 liters of 70 mM Tris pH 7.6, 5 mM DTT, 10 mM MgCl 2 and 30 µM ATP. The oligonucleotides were offset by heating to 90 ° C for 4 minutes, then the reaction was immediately transferred to 60 ° C and allowed to cool slowly to 30 ° C. Ligation was performed in 400 plits containing 60 mM Tris pH 7.6, 10 mM DTT, 10 mM MgCfe, 1 mM ATP and 0.03 units of T4 DNA ligase per ml. rubbing on incubation at 20 ° C for 1.5 hours.
20 Polyacrylamidgelelektrophorese blev anvendt til at rense de ligerede oligonukleotider. De ligerede oligonukleotider blev udfældet med ethanol, genopløst i 20 pliter 80% formamid, 50 mM Tris-borat pH 8,3, 1 mM EDTA, 0,1% efter vægt/vol. xylencyanol og 0,1% efter vægt/vol. bromphenolblåt. Hver prøve blev opvarmet ved 90 °C i 3 minutter og elektrophoreseret i 10%'s 25 urinstof-polyacrylamidgel ved 75 W i 5 timer. Oligonukleotidbåndene blev gjort synlige ved at udsætte gelen for røntgenfilm.Polyacrylamide gel electrophoresis was used to purify the ligated oligonucleotides. The ligated oligonucleotides were precipitated with ethanol, redissolved in 20 plots of 80% formamide, 50 mM Tris-borate pH 8.3, 1 mM EDTA, 0.1% w / v. xylenesanol and 0.1% by weight / vol. bromophenol. Each sample was heated at 90 ° C for 3 minutes and electrophoresed in 10% 25 urea polyacrylamide gel at 75 W for 5 hours. The oligonucleotide bands were made visible by exposing the gel to X-ray film.
231 basebåndene for hver reaktion for den N-terminale ende blev skåret ud af gelen, kombineret og elueret ved 4 °C i 1 ml 0,5 M ammoniumacetat, 1 30 mM EDTA pH 8. Den eluerede DNA blev udfældet méd ethanol og genopløst i 30 pliter 70 mM Tris pH 7,6, 5 mM DTT og 10 mM MgCl2. De 209 basebånd for den C-terminale ende blev elueret på samme måde.The 231 basebands for each reaction for the N-terminal end were cut out of the gel, combined and eluted at 4 ° C in 1 ml of 0.5 M ammonium acetate, 1 30 mM EDTA pH 8. The eluted DNA was precipitated with ethanol and redissolved in ethanol. 30 plies 70 mM Tris pH 7.6, 5 mM DTT and 10 mM MgCl2. The 209 basebands for the C-terminal end were eluted in the same way.
De gelrensede oligonukleotider blev spændingsudlignet før transformation 35 ved opvarmning til 90 °C i 4 minutter og langsomt afkølet til 20 °C. Under antagelse af et udbytte på 5% fra de oprindelige oligonukleotider blev 300 DK 175856 B1 22 fmol og 100 fmol udvundne, spændingsudlignede 231 bp oligonukleotider hver ligeret til 100 fmol agarosegelrenset 3,9 kb EcoRI-BamHI pBR322 fragment DNA i 20 pliter 25 mM Tris pH 7,8, 1 mM DTT, 10 mM MgCI2, 0,4 mM ATP med 1 enhed T4 DNA ligase i 1 time ved 20 °C. De udlignede 209 5 bp oligonukleotider blev ligeret til agaroserenset 3,9 kb BamHI-Sall pBR322 fragment DNA under samme betingelser som 231 baseparfragmenteme. Ligeringsreaktionerne blev fortyndet 1:5 i H20, og 1 pliter fortynding blev anvendt til at transformere 20 pliter kompetente E. coli RR1 celler (BRL) som beskrevet af leverandøren. Transformanteme blev udvalgt for vækst i ampi-10 cillin og screenet for tilstedeværelsen af den 231 bp EcoRI-BamHI eller den 209 BamHI-Sall indsat ved restriktionsanalyse af minilysatplasmidpræpara-ter.The gel purified oligonucleotides were voltage equalized before transformation 35 by heating to 90 ° C for 4 minutes and slowly cooled to 20 ° C. Assuming a 5% yield from the original oligonucleotides, 300 DK 175856 B1 22 fmol and 100 fmol recovered, voltage-equalized 231 bp oligonucleotides were each ligated to 100 fmol agarose gel purified 3.9 kb EcoRI-BamHI pBR322 fragment Tr pH 7.8, 1 mM DTT, 10 mM MgCl 2, 0.4 mM ATP with 1 unit of T4 DNA ligase for 1 hour at 20 ° C. The equalized 209 5 bp oligonucleotides were ligated to the agarose-purified 3.9 kb Bam HI-SalI pBR322 fragment DNA under the same conditions as the 231 base pair fragments. The ligation reactions were diluted 1: 5 in H 2 O and 1 pleat dilution was used to transform 20 pl of competent E. coli RR1 cells (BRL) as described by the supplier. The transformants were selected for growth in ampicillin and screened for the presence of the 231 bp EcoRI-BamHI or the 209 BamHI-SalI inserted by restriction analysis of minilysate plasmid preparations.
DNA-sekvensen af kloner indeholdende indsatse med passende størrelse 15 blev bestemt under anvendelse af den kemiske DNA sekvensteknik af Ma-xam og Gilbert, Proc. Natl. Acad. Sci. USA 74:560-564 (1977). Da ingen af de 231 bp kloner havde den korrekte sekvens, blev der fremstillet en klon indeholdende den korrekte sekvens som følger. En klon med den korrekte sekvens mellem Kpnl og med BamHI stederne blev kløvet med Kpnl og med 20 Sall, som kløver i pBR322 vektoren. 400 bp båndet blev gelrenset og ligeret til 3,8 kb Kpnl-Sall båndet fra en anden klon indeholdende den korrekte sekvens fra EcoRI stedet til Kpnl stedet af aFGF genindsatsen. Efter transformation blev en resulterende klon sekvenseret for at sikre, at den ønskede sekvens var blevet opnået.The DNA sequence of clones containing insert of appropriate size 15 was determined using the chemical DNA sequence technique of Ma-xam and Gilbert, Proc. Natl. Acad. Sci. USA 74: 560-564 (1977). Since none of the 231 bp clones had the correct sequence, a clone containing the correct sequence was prepared as follows. A clone with the correct sequence between KpnI and with the BamHI sites was cleaved with KpnI and with 20 SalI, which cleaved in the pBR322 vector. The 400 bp band was gel purified and ligated to the 3.8 kb KpnI-SalI band from another clone containing the correct sequence from the EcoRI site to the KpnI site of the aFGF gene insert. After transformation, a resulting clone was sequenced to ensure that the desired sequence had been obtained.
2525
Da en klon indeholdende den korrekte 209 bp sekvens var opnået, var ingen yderligere manipulation af disse kloner påkrævet. Det endelige fuldlængdede aFGF syntetiske gen blev klonet ved kløvning af den N-terminale halvklon 30 med BamHI og Sall, behandling med alkalisk phosphatase og ligering til den gelrensede 209 bp BamHI-Sall indsats af den C-terminale halvklon. Dette li-gerede materiale blev anvendt til at transformere kompetente RR1 celler som før.Once a clone containing the correct 209 bp sequence was obtained, no further manipulation of these clones was required. The final full-length aFGF synthetic gene was cloned by cleavage of the N-terminal half-clone 30 with BamHI and SalI, treatment with alkaline phosphatase, and ligation to the gel-purified 209 bp BamHI-SalI insert of the C-terminal half-clone. This ligated material was used to transform competent RR1 cells as before.
35 23 DK 175856 B1 EKSEMPEL 3EXAMPLE 3
Ekspression af det syntetiske bovine aFGF genExpression of the synthetic bovine aFGF gene
Det intakte aFGF gen fra eksempel 2 blev inkorporeret i et modificeret 5 pKK223-3 plasmid. pKK223-3 plasmidet (Pharmacia) indeholder tac- promotoren, som er en hybrid mellem regioner i trp-prpmotoreh og lac-promotoren, deBoer et al., proc. Natl. Acad. Sci. USA 80:21-25 (1983). Dette plasmid indeholder også rmB rRNA transskriptionsterminatoreri, en stærk terminatorsekvens, der har vist sig at tillade ekspression fra stærke promoto-10 rer, Gentz et al., proc. Natl. Acad. Sci. USA 78: 4936-4940 (1981), Brosius,The intact aFGF gene of Example 2 was incorporated into a modified 5 pKK223-3 plasmid. The pKK223-3 plasmid (Pharmacia) contains the tac promoter, which is a hybrid between regions of the trp-prpm motor and the lac promoter, deBoer et al., proc. Natl. Acad. Sci. USA 80: 21-25 (1983). This plasmid also contains rmB rRNA transcription terminator, a strong terminator sequence that has been shown to allow expression from strong promoters, Gentz et al., Proc. Natl. Acad. Sci. USA 78: 4936-4940 (1981), Brosius,
Gene 27:161-172 (1984). pKK223-3 plasmidet blev modificeret til fjernelse af det pBR322-afledte Sall restriktioonsenzymsted. Dette skete ved kløvning af pKK223-3 plasmid DNA med Ndel og Narl og recirkulering af det 2,7 kb DNA fragment til dannelse af klon pKK2,7. Det syntetiske aFGF gen blev derpå 15 kløvet fra sin pBR322 vektor og overført til pKK2,7 efter restriktion af denne ekspressionsvektor med EcoRI og Sall. Denne konstruktion anbringer det.initierende methionin for det syntetiske gen 11 baser efter Shine-Dalgamo ri-bosombidningsstedet. Den resulterende rekombinant, der er vist på fig. 1, blev transformeret i E. coli JM105 celler og også i E. coli DH5 celler.Gene 27: 161-172 (1984). The pKK223-3 plasmid was modified to remove the pBR322-derived SalI restriction enzyme site. This was done by cleavage of pKK223-3 plasmid DNA with Ndel and Narl and recycling the 2.7 kb DNA fragment to form clone pKK2.7. The synthetic aFGF gene was then cleaved from its pBR322 vector and transferred to pKK2.7 after restriction of this expression vector by EcoRI and SalI. This construct places the initiating methionine for the synthetic gene 11 bases after the Shine-Dalgamo ri-bosom exchange site. The resulting recombinant shown in FIG. 1, was transformed into E. coli JM105 cells and also into E. coli DH5 cells.
2020
Ekspressionskloneme blev dyrket ved 37 0C i LB bouillon (1% trypton, 0,5% gærekstrakt, 0,5% NaCI) indeholdende 0,4% glukose og 10 pg/ml ampicillin.The expression clones were grown at 37 ° C in LB broth (1% tryptone, 0.5% yeast extract, 0.5% NaCl) containing 0.4% glucose and 10 µg / ml ampicillin.
Når den optiske densitet ved 550 nm nåede 0,5, blev der tilsat IPTG for at give 1 mM, og dyrkningen blev fortsat ved 37 °C i 3 timer. Cellerne blev hø-25 stet ved centrifugering ved 10.000 x g i 20 minutter, og cellerne fra.1 liter kultur blev genopløst i 20 ml 10 mM natriumphosphat pH 7,2 (heparin/-saccharose-puffer) 5 mM EDTA, 10 N 6 pg/ml TPCK, 34,3 pg/ml pepstatin A, 87 pg/ml PMSF, 15 pg/ml BPTI og 34,3 pg/ml leupeptin. De genopløste celler blev hurtigt frosset i et tøris/ethanol-bad og opbevaret natten over ved -70 30 °C.When the optical density at 550 nm reached 0.5, IPTG was added to give 1 mM and the culture was continued at 37 ° C for 3 hours. The cells were harvested by centrifugation at 10,000 xg for 20 minutes and the cells from 1 liter culture were redissolved in 20 ml of 10 mM sodium phosphate pH 7.2 (heparin / sucrose buffer) 5 mM EDTA, 10 N 6 pg / day. ml TPCK, 34.3 pg / ml pepstatin A, 87 pg / ml PMSF, 15 pg / ml BPTI and 34.3 pg / ml leupeptin. The redissolved cells were quickly frozen in a dry ice / ethanol bath and stored overnight at -70 ° C.
EKSEMPEL 4EXAMPLE 4
Ekstraktion og rensning af rekombinant aFGF 35 De frosne celler fra eksempel 3 blev optøet, yderligere 87 pg/ml PMSF blev tilsat, og præparatet blev passeret gennem en Fransk trykcelle ved 12.000 24 DK 175856 B1 psi tre gange ved 4 °C. Det resulterende lysat blev centrifugeret ved 93.000 x g i 30 minutter til fjernelse af celledebris. Den overliggende væske blev fjernet, indstillet til pH 7,2 med 1 M NaOH og anbragt på en 1,6 x 10 cm he-parin/Sepharose-søjle (Pharmacia) drevet ved 4 °C med en strømningsha-5 stighed på 20 ml pr. time under opsamling af 2 ml fraktioner. Pellet blev genopløst i 5 ml 10 mM natriumphosphat, 2 M NaCI, pH 7,2, gencentrifugeret ved 93.000 x g i 30 minutter, og den overliggende væske blev fortyndet med 3 volumen 10 mM natriumphosphat, pH 7,2, genindstillet til pH 7,2 med 1 M NaOH, om nødvendig, og anbragt på samme heparin/sepharose-søjle. Efter 10 påføring blev søjlen vasket med 10 mM natriumphosphat, 0,8 M NaCI, pH 7,2, indtil absorbansen ved 280 nm faldt til baggrundsabsorbansen. Bundet r-aFGF blev elueret som en enkelt spids med 10 mM natriumphosphat, 1,5 M NaCI, pH 7,2. De samlede fraktioner fra heparin/sepharose-søjlen blev renset ved omvendtfaset HPLC under anvendelse af en 4,6 mm x 25 cm C4-15 søjle (Separations Group) som beskrevet af Thomas et al., Proc. Natl. Acad.Extraction and purification of recombinant aFGF 35 The frozen cells of Example 3 were thawed, an additional 87 µg / ml of PMSF was added and the preparation was passed through a French pressure cell at 12,000 psi three times at 4 ° C. The resulting lysate was centrifuged at 93,000 x g for 30 minutes to remove cell debris. The supernatant was removed, adjusted to pH 7.2 with 1 M NaOH and placed on a 1.6 x 10 cm Heparin / Sepharose column (Pharmacia) operated at 4 ° C with a flow rate of 20 ml. per. per hour while collecting 2 ml fractions. The pellet was redissolved in 5 ml of 10 mM sodium phosphate, 2 M NaCl, pH 7.2, re-centrifuged at 93,000 xg for 30 minutes, and the supernatant was diluted with 3 volume 10 mM sodium phosphate, pH 7.2, reset to pH 7.2 with 1 M NaOH, if necessary, and placed on the same heparin / sepharose column. After 10 application, the column was washed with 10 mM sodium phosphate, 0.8 M NaCl, pH 7.2 until the absorbance at 280 nm decreased to the background absorbance. Bound r-aFGF was eluted as a single peak with 10 mM sodium phosphate, 1.5 M NaCl, pH 7.2. The total fractions from the heparin / sepharose column were purified by reverse-phase HPLC using a 4.6 mm x 25 cm C4-15 column (Separations Group) as described by Thomas et al., Proc. Natl. Acad.
Sci. USA 81:357-361 (1984). r-aFGF elueredes som en enkelt hovedspids, der blev opløst fra flere mindre forurenende spidser, hvilket antydede, at proteinet var homogent rent. Polyacrylamidgelelektrophorese blev anvendt til at bekræfte renhed. Den rensede r-aFGF blev elektrophoreseret ved at følge 20 teknikken af O'Farrell, J. Biol. Chem. 250:4007-4021 (1975). Sølvfarvning afslørede et enkelt bånd med en molekylmasse på 16.000 daltons. Identitet af proteinet som aFGF blev bekræftet ved såvel aminosyreanalyse som amino-terminal sekvensbestemmelse.Sci. USA 81: 357-361 (1984). r-aFGF was eluted as a single main peak, which was dissolved from several less polluting peaks, suggesting that the protein was homogeneously pure. Polyacrylamide gel electrophoresis was used to confirm purity. The purified r-αFGF was electrophoresed following the technique of O'Farrell, J. Biol. Chem. 250: 4007-4021 (1975). Silver staining revealed a single band with a molecular mass of 16,000 daltons. Identity of the protein as aFGF was confirmed by both amino acid analysis and amino-terminal sequencing.
25 EKSEMPEL 5EXAMPLE 5
Biologisk aktivitet af bovin rekombinant aFGFBiological activity of bovine recombinant aFGF
Biologisk aktivitet af den rensede r-aFGF fra eksempel 4 blev bedømt under anvendelse af en fibroblastmitogen prøve som beskrevet af Thomas et al., J.Biological activity of the purified r-aFGF of Example 4 was assessed using a fibroblast mitogenic sample as described by Thomas et al., J.
30 Biol. Chem. 225:5517-5520 (1980). BALB/c 3T3 A31 fibroblaster (American Type Culture Collection) blev udstrøget med 2 x 104 celler pr. brønd med 35 mm i diameter i et dyrkningsmedium indeholdende 10% varmeinaktiviteret kalveserum og inkuberet i 7% CO2 (pH 7,35 ± 0,05). Cellerne blev fuldt lan-tente ved at erstatte mediet med 0,5% varmeinaktiveret kalveserum 6 og 35 igen 24 timer senere. 55 timer efter udstrygning blev der tilsat 50 pg heparin, testprøver og 1,1 pg dexamethason, ved 70 timer blev hver brønd suppleret 25 DK 175856 B1 med 2 pCi [methyl-3-H]-thymidin (20 Ci/mmol, New England Nuklear) og 3 pg umærket thymidin (Sigma), og ved 95 timer blev cellerne behandlet til bestemmelse af radiomærke inkorporeret i DNA. Hver dosisresponspunkt var gennemsnittet af tre bestemmelser. Resultaterne fremgår af den efterfølgen-5 de tabel:Biol. Chem. 225: 5517-5520 (1980). BALB / c 3T3 A31 fibroblasts (American Type Culture Collection) were plated at 2 x 10 4 cells per cell. 35 mm diameter well in a culture medium containing 10% heat inactivated calf serum and incubated in 7% CO 2 (pH 7.35 ± 0.05). The cells were fully stained by replacing the medium with 0.5% heat-inactivated calf serum 6 and 35 again 24 hours later. 55 hours after ironing, 50 µg of heparin, test samples and 1.1 µg of dexamethasone were added, at 70 hours each well was supplemented with 2 µCi [methyl-3-H] thymidine (20 Ci / mmol, New England Nuclear) and 3 µg of unlabeled thymidine (Sigma), and at 95 hours, the cells were processed to determine radiolabelling into DNA. Each dose response point was the average of three determinations. The results are shown in the following table:
TABEL VIIITABLE VIII
Mitogent respons af BALB/c 3T3 Fibroblaster mod bovin r-aFGFMitogenic response of BALB / c 3T3 Fibroblasts to bovine r-aFGF
Koncentration CPM___' r-aFGF (ng/ml)_r-aFGF_Hjerne aFGF_ 0,003 _ 268_ 231 0,01_ 498 329_ 0,031 1550_ 1017_ 0,1_ 7031_ 3684_ 0,316_9319 _ 11353_ 1.000 |4718 [9050Concentration CPM___r-aFGF (ng / ml) _r-aFGF_Brain aFGF_ 0.003 _ 268_ 231 0.01_ 498 329_ 0.031 1550_ 1017_ 0.1_ 7031_ 3684_ 0.316_9319 _ 11353_ 1,000 | 4718 [9050
Aktiviteten af den rekombinante aFGF var lig med eller lidt større end aktiviteten af hjerneafledt aFGF. Den rensede r-aFGF havde en halv-maksimal 10 stimulering af DNA syntese ved ca. 71 pg/ml, mens renset hjemeafledt aFGF havde en halvmaksimal værdi ved 126 pg/ml.The activity of the recombinant aFGF was equal to or slightly greater than the activity of brain-derived aFGF. The purified r-aFGF had a half-maximal stimulation of DNA synthesis at ca. 71 pg / ml, while purified home-derived aFGF had a half-maximum value at 126 pg / ml.
EKSEMPEL 6 15 Mutagenese af bovint aFGF gen til det humane aFGF genExample 6 Mutagenesis of bovine aFGF gene to the human aFGF gene
For at lette mutagenesen af det bovine aFGF gen blev det syntetiske gen fra eksempel 2 overført til M13mp19, en enkeltstrenget DNA bakteriofag vektor. Standardmutageneseprocedurer blev anvendt som rapporteret af Zoller og Smith, Methods in Enzymology, 100:468-500 (1983); Norris et al., Nucleic 20 AcidsResearch, 11:5103-5112 og Zoller og Smith, DNA, 3:479-488. Det bovine pKK-aFGF plasmid blev kløvet med EcoRI og Sall, se tabel III, og det resulterende 440 bp fragment blev agarosegelrenset som i eksempel 2. Vektor M13mp19 RF DNA (BRL) blev kløvet med de samme to endonukleaser, og enderne blev derefter dephosphoryleret i 100 pliter 10 mM Tris pH 8,0 26 DK 175856 B1 puffer med 100 enheder bakteriel alkalisk phosphatase. En ligering blev foretaget under anvendelse af 50 ng af den behandlede vektor DNA og 12 ng af aFGF genfragment DNA i 10 pliter 25 mM Tris pH 7,8, 10 mM MgCI2, 1 mM DTT, 0,4 mM ATP, med 2 enheder T4 DNA ligase i 16 timer ved 4 °C. Reak-5 tionsblandingen blev fortyndet 1:5 i H20, og 1 pliter opløsning blev anvendt til at transformere 20 pliter kompetente E. coli DH5 celler (BRL) som beskrevet af leverandøren. Cellerne blev udstøjet med E. coli JM105 (Pharmacia) værtsceller i 0,03% X-gal og 0,3 mM IPTG; efter inkubering ved 37 °C blev der opnået farveløst plaques. En fagklon indeholdende det bovine aFGF blev 10 udvalgt, M13mp19-aFGF.To facilitate the mutagenesis of the bovine aFGF gene, the synthetic gene of Example 2 was transferred to M13mp19, a single-stranded DNA bacteriophage vector. Standard mutagenesis procedures were used as reported by Zoller and Smith, Methods in Enzymology, 100: 468-500 (1983); Norris et al., Nucleic Acids Research, 11: 5103-5112, and Zoller and Smith, DNA, 3: 479-488. The bovine pKK-αFGF plasmid was cleaved with EcoRI and SalI, see Table III, and the resulting 440 bp fragment was agarose gel purified as in Example 2. Vector M13mp19 RF DNA (BRL) was cleaved with the same two endonucleases and the ends were then dephosphorylated. in 100 pliter 10 mM Tris pH 8.0 26 B1 buffer with 100 units of bacterial alkaline phosphatase. A ligation was made using 50 ng of the treated vector DNA and 12 ng of aFGF gene fragment DNA in 10 pls 25 mM Tris pH 7.8, 10 mM MgCl 2, 1 mM DTT, 0.4 mM ATP, with 2 units of T4 DNA ligase for 16 hours at 4 ° C. The reaction mixture was diluted 1: 5 in H 2 O and 1 pl of solution was used to transform 20 pl of competent E. coli DH5 cells (BRL) as described by the supplier. The cells were plated with E. coli JM105 (Pharmacia) host cells in 0.03% X-gal and 0.3 mM IPTG; after incubation at 37 ° C, colorless plaques were obtained. A phage clone containing the bovine aFGF was selected, M13mp19-aFGF.
! 8 oligonukleotider blev designet for at specificere den humane sekvens og syntetiseret, se tabel VI.! Eight oligonucleotides were designed to specify the human sequence and synthesized, see Table VI.
15 Oligomer 8 indeholder en yderligere mutation, i hvilken thymin ved sted 386 i det bovine gen er erstattet med cytosin i det humane gen. Denne mutation tillader inkorporering af et restriktionssted uden ændring af den humane aFGF aminosyresekvens.Oligomer 8 contains an additional mutation in which thymine at site 386 in the bovine gene is replaced by cytosine in the human gene. This mutation allows the incorporation of a restriction site without altering the human aFGF amino acid sequence.
20 De humane oligomere 1,2, 3, 4, 6 og 8 blev phosphoryleret, 15 pmol af hver blev sammensmeltet individuelt med 0,5 pmol M13mp19-aFGF enkeltstren-get fag DNA i 10 pliter 20 mM Tris pH 7,5,10 mM MgCI2, 50 mM NaCI, 1 mM DTT i 10 minutter ved 65 0 C efterfulgt af 10 minutter ved 23 °C. Lukketcirkulære dobbeltstrengede molekyler blev derpå fremstillet i 20 pliter 20 mM 25 Tris pH 7,5, 10 mM MgCI2, 25 mM NaCI, 5,5 mM DTT, 0,5 mM ATP, 0,25 mM dATP, 0,25 mM dCTP, 0,25 mM dCTP, 0,25 mM dGTP, 0,25 mM dTTP under anvendelse af 1 enhed T4 DNA ligase og 2 enheder DNA polymerase I Klenow fragment ved inkubering ved 15 °C i 17 timer. Præparaterne blev hver især anvendt til at transformer kompetente JM105 celler, og de resulte-30 rende transformante plaques blev udvalgt ved hybridisering med den passende oligomere, som var blevet radiomærket under anvendelse 32P-ATP og polynukleotidkinase. Betingelserne for hybridisering blev optimeret for hver probe for at forhindre dannelse af hybrider indeholdende enkeltbaseændrin-ger. Enkeltstrenget DNA blev isoleret fra fagklonen indeholdende human oli-3 5 gomer 4 mutationer, og ovennævnte procedure blev gentaget under anven- DK 175856 B1 27 delse af human oligomer 5 for at danne en klon indeholdende såvel oligomer , 4 som 5 mutationer.The human oligomers 1,2, 3, 4, 6 and 8 were phosphorylated, 15 pmol of each were individually fused with 0.5 pmol of M13mp19-aFGF single-stranded phage DNA in 10 pliter 20 mM Tris pH 7.5.10 mM MgCl 2, 50 mM NaCl, 1 mM DTT for 10 minutes at 65 ° C followed by 10 minutes at 23 ° C. Sealed circular double-stranded molecules were then prepared in 20 plits of 20 mM 25 Tris pH 7.5, 10 mM MgCl 2, 25 mM NaCl, 5.5 mM DTT, 0.5 mM ATP, 0.25 mM dATP, 0.25 mM dCTP, 0.25 mM dCTP, 0.25 mM dGTP, 0.25 mM dTTP using 1 unit of T4 DNA ligase and 2 units of DNA polymerase I Klenow fragment by incubation at 15 ° C for 17 hours. The preparations were each used to transform competent JM105 cells and the resulting transformant plaques were selected by hybridization with the appropriate oligomer which had been radiolabelled using 32P-ATP and polynucleotide kinase. Hybridization conditions were optimized for each probe to prevent the formation of hybrids containing single base changes. Single-stranded DNA was isolated from the phage clone containing human oligomer 5 mutant 4 mutations, and the above procedure was repeated using human oligomer 5 to form a clone containing both oligomer 4 and 5 mutations.
i I de følgende procedurer blev de bovin-til-human sekvensmutationer i M13-5 baserede kloner kombineret i en pBR322-baseret klon. RF DNA blev fremstillet ud fra kloner indeholdende baseændringer specificeret af humane oli- ' gomere 1, 2, 6 og 8. DNA fra den humane 1 mutantklon blev kløvet med EcoRI, enderne blev dephosphoryleret med bakteriel alkalisk phosphatase, og DNA blev kløvet med Hindlll. Den humane 2 mutant DNA blev kløvet med · ίο Hindlll, behandlet med phosphatase og derpå kløvet med BamHI. Den humane 6 mutant DNA blev kløvet med BamHI, behandlet med phosphatase og derefter kløvet med Apal. Ligeledes blev den humane 8 mutant DNA kløvet med Apal, enderne blev phosphoryleret, og DNA blev kløvet med Sall.In the following procedures, the bovine-to-human sequence mutations in M13-5-based clones were combined into a pBR322-based clone. RF DNA was prepared from clones containing base changes specified by human oligomers 1, 2, 6 and 8. DNA from the human 1 mutant clone was cleaved with EcoRI, the ends dephosphorylated with bacterial alkaline phosphatase, and DNA was cleaved with HindIII. The human 2 mutant DNA was digested with Hindο HindIII, treated with phosphatase and then digested with BamHI. The human 6 mutant DNA was digested with BamHI, treated with phosphatase and then digested with Apal. Likewise, the human 8 mutant DNA was cleaved with Apal, the ends were phosphorylated and DNA was cleaved with SalI.
Disse fire DNA præparater blev elektrophoreseret gennem 2% agarose, og 15 fragmenterne af 45bp, 190 bp, 135 bp og 70 bp fra mutant DNA indehoiden-| de humane 1, 2, 6 og 8 mutationer blev elueret fra gelen. Ca. 60 fmol af hver fragment blev kollektivt ligeret til ca. 60 fmol af et gelrenset 3,7 kb EcoRI-Sall fragment fra pBR322 i 5 pliter 25 mM Tris pH 7,8, 10 mM MgCfe, 1 mM DTT, 0,4 mM ATP med 1,5 enheder T4 DNA ligase i 16 timer ved 12 0C.These four DNA preparations were electrophoresed through 2% agarose, and the 15 fragments of 45bp, 190bp, 135bp and 70bp of mutant DNA contained within the | the human 1, 2, 6 and 8 mutations were eluted from the gel. Ca. 60 fmol of each fragment was collectively ligated to ca. 60 fmol of a gel purified 3.7 kb EcoRI-SalI fragment from pBR322 in 5 pliter 25 mM Tris pH 7.8, 10 mM MgCfe, 1 mM DTT, 0.4 mM ATP with 1.5 units of T4 DNA ligase for 16 hours at 120 ° C.
2 o Reaktionsblandingen blev fortyndet 1:5 i H20, og 1 pliter fortynding blev anvendt til at transformere 20 pliter kompetente E. coli DH5 celler (BRL) som beskrevet af leverandøren. En klon indeholdende mutationerne specificeret af alle fire mutantoligomere blev valgt ved hybridisering med radiomærkede prober fremstillet ud fra hver af de oligomere. Det 140 bp Kpnl-BamHI DNA 25 fragment isoleret fra kløvet RF DNA af de humane 3 mutant M13 klon blev ligeret til endonukleasekløvningsprodukter fra den humane 1-2-6-8 mutant DNA og transformeret i DH5 kompetente celler for at danne en klon med de humane 1-2-3-6-8 mutationer. BamHI-Pstl nedbrydningsfragmenter af sidstnævnte klon blev ligeret til BamHI-Pstl nedbrydningsfragmenter af RF DNA 30 fra den humane 4-5 M13-baserede klon, og blandingen fra ligeringen blev anvendt til at transformere DH5 kompetente celler. En klon indeholdende de ' humane 1-2-3-4-5-6-8 mutationer blev udvalgt ved oligomer hybridisering, og aFGF gen EcoRI-Sall DNA fragmentet af dette rekombinante plasmid blev ligeret til phosphatase-behandlet EcoRI-Sall-kløvet RF DNA af M13mp18 35 (BRL). Kompetente DH5 celler blev transformeret med ligeret DNA, og de transformerede celler blev udbredt på JM105 værtsceller for at danne en 28 DK 175856 B1 M13 klon. Den enkeltstrengede fag DNA af denne klon blev sammensmeltet med den humane 7 oligomere, og en M13 klon indeholdende alle de ønskede mutationer blev opnået ved at gå frem efter proceduren som beskrevet i det foregående. RF DNA blev fremstillet ud fra denne klon og kløvet med 5 EcoRI og Sall. Det resulterende 440 bp bånd blev gelrenset og ligeret til det 2,7 kb EcoRI-Sall DNA fragment af pKK2,7 tac-promotor-ekspressionsvektor. Denne DNA blev anvendt til at transformere kompetente DH5 celler, hvorved man dannede den humane pKK-aFGF ekspressionsklon anvendt til produktion af den humane form for aFGF. ioThe reaction mixture was diluted 1: 5 in H 2 O and 1 pl of dilution was used to transform 20 pl of competent E. coli DH5 cells (BRL) as described by the supplier. A clone containing the mutations specified by all four mutant oligomers was selected by hybridization with radiolabelled probes prepared from each of the oligomers. The 140 bp Kpnl-BamHI DNA 25 fragment isolated from cleaved RF DNA of the human 3 mutant M13 clone was ligated to endonuclease cleavage products of the human 1-2-6-8 mutant DNA and transformed into DH5 competent cells to form a clone with the human 1-2-3-6-8 mutations. BamHI-PstI degradation fragments of the latter clone were ligated to BamHI-PstI degradation fragments of RF DNA 30 from the human 4-5 M13-based clone and the mixture from the ligation was used to transform DH5 competent cells. A clone containing the human 1-2-3-4-5-6-8 mutations was selected by oligomer hybridization and the aFGF gene EcoRI-SalI DNA fragment of this recombinant plasmid was ligated to phosphatase-treated EcoRI-SalI cleaved RF DNA of M13mp18 35 (BRL). Competent DH5 cells were transformed with ligated DNA and the transformed cells were propagated on JM105 host cells to form a clone. The single stranded phage DNA of this clone was fused to the human 7 oligomer and an M13 clone containing all the desired mutations was obtained by following the procedure described above. RF DNA was prepared from this clone and digested with 5 EcoRI and SalI. The resulting 440 bp band was gel purified and ligated to the 2.7 kb EcoRI-SalI DNA fragment of pKK2.7 tac promoter expression vector. This DNA was used to transform competent DH5 cells to form the human pKK-aFGF expression clone used to produce the human form of aFGF. in Island
Den humane r-aFGF blev renset ved samme procedure som anvendt for den bovine r-aFGF, se eksempel 4. Den humane r-aFGF blev bedømt som værende mindst 99,75% ren baseret på tilstedeværelsen af et intenst bånd på en sølvfarvet SDS elektroforese gel påført 400 ng renset human r-aFGF og 15 med en intensitet på ca. 1 ng/bånd. Protokollen er beskrevet i eksempel 4.The human r-aFGF was purified by the same procedure as used for the bovine r-aFGF, see Example 4. The human r-aFGF was judged to be at least 99.75% pure based on the presence of an intense band on a silver-colored SDS electrophoresis. gel applied to 400 ng of purified human r-aFGF and 15 with an intensity of approx. 1 ng / band. The protocol is described in Example 4.
Den rene rekombinante humane aFGF blev prøvet for mitogen aktivitet under anvendelse af 3H-thymidin inkorporering i sammenflydende BALB/c 3T3 celler som beskrevet for det bovine rekombinante protein i eksempel 5. Som 20 tidligere observeret med human hjerne-afledt aFGF afprøvet på vaskulære endotheiialceller udviser det rekombinante humane protein en større forskel i heparin (50 pg/ml) aktivering end tilfældet er for såvel hjerne-afledt som re-kombinant bovint aFGF, Gimenez-Gallego et al., Biochem. Biophys. Res. Comm. 135:541-548 (1986); Resultaterne er rekombinant human aFGF på 2 5 BALB/c 3T3 celler fremgår følgende tabel: 29 DK 175856 B1The pure recombinant human aFGF was tested for mitogenic activity using 3H-thymidine incorporation into confluent BALB / c 3T3 cells as described for the bovine recombinant protein of Example 5. As previously observed with human brain-derived aFGF tested on vascular endothelial cells. the recombinant human protein has a greater difference in heparin (50 pg / ml) activation than is the case for both brain-derived and recombinant bovine aFGF, Gimenez-Gallego et al., Biochem. Biophys. Res. Comm. 135: 541-548 (1986); The results are recombinant human aFGF on 25 BALB / c 3T3 cells are shown in the following table: 29 DK 175856 B1
TABEL IXTABLE IX
Mitogen respons for BALB/c 3T3 fibroblaster mod human r-aFGF KoncentrationMitogenic response of BALB / c 3T3 fibroblasts to human r-aFGF concentration
r-aFGF CPMr-aFGF CPM
(picogram/ml)‘_- heparin_+ heparin_' 0 3574 991 1 4156 1336 3,16 4216 1802 10,0 4092 2617 31,6 4155 4824 100 4274 10489 316 6060 14584 1000(1 ng) 6811 10547 3160 7910 12357 10000 8597 9143 31600 9700 9057 100000 11166 9277 1000000 15864 12425 * picogram - 10'12 gram I nærværelse af heparin forekommer den halv-maksimale stimulering ved ca.(picogram / ml) "_- heparin_ + heparin" 0 3574 991 1 4156 1336 3.16 4216 1802 10.0 4092 2617 31.6 4155 4824 100 4274 10489 316 6060 14584 1000 (1 ng) 6811 10547 3160 7910 12357 10000 8597 9143 31600 9700 9057 100000 11166 9277 1000000 15864 12425 * picogram - 10'12 grams In the presence of heparin, the half-maximal stimulation occurs at approx.
5 42 pg/ml. I fravær af heparin var spidsen ikke klart nået selv ved den højeste koncentration men må være større end ca. 50 ng/ml.42 pg / ml. In the absence of heparin, the peak was not clearly reached even at the highest concentration but must be greater than ca. 50 ng / ml.
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| DK199801023A DK175856B1 (en) | 1986-07-11 | 1998-08-11 | New bovine and human acidic fibroblast growth factors - useful for stimulating DNA synthesis in responsive cells and esp. for wound heating |
Applications Claiming Priority (8)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US88446086A | 1986-07-11 | 1986-07-11 | |
| US88446086 | 1986-07-11 | ||
| US5499187A | 1987-06-04 | 1987-06-04 | |
| US5499187 | 1987-06-04 | ||
| DK198703587A DK175786B1 (en) | 1986-07-11 | 1987-07-10 | Cloning and expression of acidic fibroblast growth factor |
| DK358787 | 1987-07-10 | ||
| DK199801023A DK175856B1 (en) | 1986-07-11 | 1998-08-11 | New bovine and human acidic fibroblast growth factors - useful for stimulating DNA synthesis in responsive cells and esp. for wound heating |
| DK102398 | 1998-08-11 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| DK199801023A DK199801023A (en) | 1998-08-11 |
| DK175856B1 true DK175856B1 (en) | 2005-04-11 |
Family
ID=34400396
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK199801023A DK175856B1 (en) | 1986-07-11 | 1998-08-11 | New bovine and human acidic fibroblast growth factors - useful for stimulating DNA synthesis in responsive cells and esp. for wound heating |
Country Status (1)
| Country | Link |
|---|---|
| DK (1) | DK175856B1 (en) |
-
1998
- 1998-08-11 DK DK199801023A patent/DK175856B1/en not_active IP Right Cessation
Also Published As
| Publication number | Publication date |
|---|---|
| DK199801023A (en) | 1998-08-11 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| PUP | Patent expired |