CN1705740B - Adenovirus with reverse gene expression and its application - Google Patents
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本发明涉及腺病毒、编码它们的核酸及其应用,特别是在制备用于治疗肿瘤的药物的应用。 The present invention relates to adenoviruses, nucleic acids encoding them and their applications, especially in the preparation of medicaments for treating tumors. the
当前在治疗肿瘤中利用许多治疗原理。除了使用外科手术以外,化学疗法和放射疗法是占优势的。然而所有这些技术都伴有相当大的副作用。复制选择性的溶瘤病毒的应用提供了治疗肿瘤的新平台。与之相应地,引发病毒剂的选择性的肿瘤内复制,导致病毒复制、受染肿瘤细胞的裂解和病毒向相邻肿瘤细胞的扩散。因为病毒复制能力限于肿瘤细胞,正常组织免于病毒复制并因此免于病毒裂解。 A number of therapeutic principles are currently utilized in the treatment of tumors. In addition to the use of surgery, chemotherapy and radiotherapy are prevalent. All of these techniques, however, are associated with considerable side effects. The application of replication-selective oncolytic viruses provides a new platform for the treatment of tumors. In turn, selective intratumoral replication of the viral agent is initiated, resulting in viral replication, lysis of infected tumor cells and spread of the virus to adjacent tumor cells. Because viral replication capacity is limited to tumor cells, normal tissues are protected from viral replication and thus viral lysis. the
目前,对几种病毒系统进行了目的在于肿瘤裂解的临床试验。该腺病毒的一个实例是dl1520(Onyx-015),其已经成功用于I期和II期临床(Khuri,F.等Nature Medicine 6,879-885,2000)。Onyx-015是一种具有完全缺失E1B-55kDa基因的腺病毒。腺病毒的E1B-55kDa蛋白的完全缺失是基于一项发现,即具有p53缺失的腺病毒载体可能导致复制和因此细胞的裂解(Kirn,D.等,Proc.Am.Soc.Clin.Oncol.17,391a,1998),其中正常细胞不受伤害。更具体地,E1B-55kDa基因产物参与p53的抑制,病毒mRNA的转运和宿主细胞蛋白合成的切断。p53的抑制是通过由p53和腺病毒编码的E1B-55kDa蛋白的复合物和/或由E1B-55kDa和E4orf6的复合物的形成而发生。由TP53编码的p53是复合物调节机制的起点(Zambetti,G.P.等,FASEB J.7,855-865,1993),其尤其有效地抑制病毒(如腺病毒)的细胞复制。基因TP53在约50%的所有人肿瘤中缺失或突变,导致由化学疗法或放射疗法导致的期望细胞凋亡的缺乏,造成通常不成功的肿瘤治疗。 Currently, several viral systems are in clinical trials aimed at tumor lysis. An example of this adenovirus is dl1520 (Onyx-015), which has been successfully used in Phase I and Phase II clinical trials (Khuri, F. et al. Nature Medicine 6, 879-885, 2000). Onyx-015 is an adenovirus with a complete deletion of the E1B-55kDa gene. The complete deletion of the E1B-55 kDa protein of adenoviruses is based on the finding that adenoviral vectors with deletion of p53 may lead to replication and thus lysis of cells (Kirn, D. et al., Proc. Am. Soc. Clin. Oncol. 17 , 391a, 1998), wherein normal cells are not harmed. More specifically, the E1B-55kDa gene product is involved in the repression of p53, the translocation of viral mRNA and the shutting down of host cell protein synthesis. Inhibition of p53 occurs through the formation of a complex between p53 and the E1B-55kDa protein encoded by the adenovirus and/or a complex between E1B-55kDa and E4orf6. p53, encoded by TP53, is the starting point of the regulatory machinery of the complex (Zambetti, G.P. et al., FASEB J. 7, 855-865, 1993), which is particularly potent in inhibiting cellular replication of viruses such as adenoviruses. The gene TP53 is deleted or mutated in approximately 50% of all human tumors, leading to a lack of desired apoptosis by chemotherapy or radiation therapy, resulting in often unsuccessful tumor treatments. the
裂解肿瘤(tumorlytic)腺病毒的另一原理是基于一项发现,即如果E1A蛋白以特定的缺失形式存在或包含一个或多个突变而不影响Rb/E2F和/或p107/E2F和/或p130/E2F的结合,该腺病毒将不诱导感染的细胞进入S期,并且能够在不含有功能性的Rb蛋白的肿瘤细胞中复制。另外,E1A 蛋白分别可以在N-末端缺失和在E1A蛋白的1-76的氨基酸区域上包含一个或多个突变,以便抑制E1A与p300的结合和因此提供在肿瘤细胞中的选择性复制。这些方法在欧洲专利EP 0 931 830中以例举的方式描述。这些病毒的实例是AdΔ24,dl922-947,E1Ad/01/07和CB016(Howe,J.A.等,Molecular Therapy 2,485-495,2000;Fueyo,J.等,Oncogene 19,2-12,2000;Heise,C.等,Nature Medicine 6,11341139,2001;Balague,C.等,J.Virol.75,7602-7611,2001)。这些在现有技术中已知用于溶癌作用的腺病毒系统因此包含E1A蛋白中不同的缺失,其中已经在以下假设下制造了这些缺失:功能性的Rb蛋白和由无活性的Rb蛋白和E2F组成的复合物能分别阻断有效的体内复制,以使腺病毒仅在Rb-阴性/突变细胞中进行体内复制。按照现有技术的这些腺病毒系统是基于E1A,以便通过早期E2启动子(英文是E2 early promoter)和自由E2F(Dyson,N.Genes&Development,12,2245-2262,1998)控制体内复制。 Another rationale for lysing tumorlytic adenoviruses is based on the discovery that Rb/E2F and/or p107/E2F and/or p130 are not affected if the E1A protein is present in a specific deleted form or contains one or more mutations /E2F, the adenovirus will not induce S phase in infected cells and will be able to replicate in tumor cells that do not contain a functional Rb protein. Additionally, the E1A protein may be N-terminally deleted and contain one or more mutations in the amino acid region 1-76 of the E1A protein, respectively, in order to inhibit the binding of E1A to p300 and thus provide for selective replication in tumor cells. These methods are described by way of example in European patent EP 0 931 830. Examples of these viruses are AdΔ24, dl922-947, E1Ad/01/07 and CB016 (Howe, J.A. et al., Molecular Therapy 2, 485-495, 2000; Fueyo, J. et al., Oncogene 19, 2-12, 2000; Heise , C. et al., Nature Medicine 6, 11341139, 2001; Balague, C. et al., J.Virol.75, 7602-7611, 2001). These adenoviral systems known in the prior art for oncolysis therefore contain various deletions in the E1A protein, which have been made under the assumption that a functional Rb protein and a combination of an inactive Rb protein and The complex composed of E2F blocks efficient in vivo replication, respectively, so that the adenovirus replicates in vivo only in Rb-negative/mutant cells. These adenoviral systems according to the prior art are based on E1A in order to control replication in vivo by the early E2 promoter (E2 early promoter in English) and free E2F (Dyson, N. Genes & Development, 12, 2245-2262, 1998). the
裂解肿瘤腺病毒系统的另一种形式是基于对特异性表达病毒癌基因E1A的选择性启动子的使用,其提供在肿瘤细胞中的选择性复制(Rodriguez,R.等,Cancer Res.57,2559-2563,1997)。 Another version of the tumor-lytic adenoviral system is based on the use of a selective promoter specifically expressing the viral oncogene E1A, which provides selective replication in tumor cells (Rodriguez, R. et al., Cancer Res. 57, 2559-2563, 1997). the
如上所述,选择适于各个作用模式的原理的细胞背景对于腺病毒肿瘤裂解病毒的各种原理是重要的。换句话说,只有当认识了不同的分子生物学先决条件时,才能使用当前已知的各种腺病毒系统。这限制了这些系统应用于不同的患者群。 As mentioned above, selection of the cellular context appropriate to the principle of each mode of action is important for the various principles of adenoviral oncolytic viruses. In other words, the various currently known adenoviral systems can only be used if the different molecular biological prerequisites are recognized. This limits the application of these systems to different patient populations. the
一旦患者产生所谓的多药抗性(英文是multidrug resistance(MDR)),治疗肿瘤病时会出现一个特殊问题,该多药抗性代表一种研究得特别详尽的肿瘤对细胞生长抑制剂(cytostatics)的抗性(Gottesman和Pastan,Annu.Rev.Biochem.62,385-427,1993)。它是基于膜结合转运蛋白P-糖蛋白的过量表达,该蛋白属于所谓的ABC转运蛋白(Stein,U.等,JBC 276,28562-69,2001,J.Wijnholds,Novartis Found Symp.,243,69-79,2002)。Bargou,R.C.等和Oda,Y.等(Bargou,R.C.等,Nature Medicine 3,447-450,1997;Clin.CancerRes.4,2273-2277,1998)能够证明,人转录因子YB-1的核定位直接参与P-糖蛋白表达的激活。进一步的研究证实,YB-1通过各种胁迫条件如UV照射、细胞生长抑制剂的给药(Koike,K.等,FEBS Lett 17,390-394,1997) 和过热(Stein,U.等,JBC 276,28562-69,2001)而转运到核内。进一步的研究证实,YB-1的核定位对另一个ABC转运蛋白具有影响。该ABC转运蛋白称为MRP(英文是multidrug resistance-related protein,多重药抗性相关蛋白),并参与形成所谓的非典型非P-糖蛋白依赖性的多重药抗性(Stein,U.等,JBC 276,28562-69,2001)。 A particular problem in the treatment of oncological diseases arises once a patient develops so-called multidrug resistance (MDR in English), which represents a particularly well-studied tumor effect on cytostatics. ) resistance (Gottesman and Pastan, Annu. Rev. Biochem. 62, 385-427, 1993). It is based on overexpression of the membrane-bound transporter P-glycoprotein, which belongs to the so-called ABC transporters (Stein, U. et al., JBC 276, 28562-69, 2001, J. Wijnholds, Novartis Found Symp., 243, 69-79, 2002). Bargou, R.C. et al. and Oda, Y. et al. (Bargou, R.C. et al., Nature Medicine 3, 447-450, 1997; Clin. Cancer Res. 4, 2273-2277, 1998) were able to demonstrate that the nuclear localization of the human transcription factor YB-1 Directly involved in the activation of P-glycoprotein expression. Further studies confirmed that YB-1 was induced by various stress conditions such as UV irradiation, cytostatic administration (Koike, K. et al., FEBS Lett 17, 390-394, 1997) and overheating (Stein, U. et al., JBC 276, 28562-69, 2001) and transported into the nucleus. Further studies confirmed that the nuclear localization of YB-1 has an effect on another ABC transporter. The ABC transporter is called MRP (English is multidrug resistance-related protein, multidrug resistance-related protein), and participates in the formation of so-called atypical non-P-glycoprotein-dependent multidrug resistance (Stein, U. et al., JBC 276, 28562-69, 2001). the
本发明解决的问题是,提供了一种技术教导和特别是一种方法,其允许具体地使用裂解肿瘤活性剂治疗生物体,更具体地分别治疗人类生物体和一组患者。本发明解决的另一问题是,提供了适于在患者中导致肿瘤裂解的方法,所述患者患有抗细胞生长抑制剂的肿瘤病,特别是具有多药抗性的那些。最后,本发明解决的一个问题是,提供了一种适于细胞裂解的腺病毒。 The problem solved by the present invention is that of providing a technical teaching and in particular a method which allows in particular the treatment of an organism, more particularly a human organism and a group of patients, respectively, with a tumor-lytic agent. Another problem addressed by the present invention is to provide methods suitable for causing tumor lysis in patients suffering from cytostatically resistant neoplastic diseases, especially those with multidrug resistance. Finally, a problem solved by the present invention is to provide an adenovirus suitable for cell lysis. the
本发明解决的问题的第一方面是通过能在表达选自包含E1A-蛋白的组的第二种蛋白之前表达选自包含E1B蛋白和E4蛋白的组的第一种蛋白的腺病毒解决的。 The first aspect of the problem to be solved by the present invention is solved by an adenovirus capable of expressing a first protein selected from the group comprising E1B protein and E4 protein before expressing a second protein selected from the group comprising E1A-protein. the
在一个实施方案中,第一种蛋白是E1B蛋白,优选E1B55kd蛋白。 In one embodiment, the first protein is an E1B protein, preferably an E1B55kd protein. the
在另一个实施方案中,第一种蛋白是E4蛋白,优选E4orf6蛋白。 In another embodiment, the first protein is an E4 protein, preferably an E4orf6 protein. the
在一个优选的实施方案中,第一种蛋白是E1B蛋白和E4蛋白的组合,优选E1B55kD蛋白和E4orf6蛋白的组合。 In a preferred embodiment, the first protein is a combination of E1B protein and E4 protein, preferably a combination of E1B55kD protein and E4orf6 protein. the
在一个优选的实施方案中,E1A蛋白是E1A12S蛋白。 In a preferred embodiment, the E1A protein is an E1A12S protein. the
本发明解决的问题的第二方面是通过腺病毒解决的,其中所述的腺病毒包含至少一种编码选自包含E1B蛋白、E4蛋白和E1A蛋白的组的蛋白的核酸,其中至少一种蛋白在启动子的控制下,所述启动子与在野生型腺病毒中控制蛋白表达的启动子不同。 The second aspect of the problem to be solved by the present invention is solved by adenovirus, wherein said adenovirus comprises at least one nucleic acid encoding a protein selected from the group consisting of E1B protein, E4 protein and E1A protein, wherein at least one protein It is under the control of a promoter different from that which controls protein expression in wild-type adenovirus. the
在第二方面的一个实施方案中,腺病毒是根据本发明的第一方面的腺病毒。 In one embodiment of the second aspect, the adenovirus is an adenovirus according to the first aspect of the invention. the
在第二方面的一个实施方案中,至少一种蛋白是E1B蛋白,优选E1B55kD蛋白。 In one embodiment of the second aspect, at least one protein is an E1B protein, preferably an E1B55kD protein. the
在第二方面的一个实施方案中,至少一种蛋白是E4蛋白,优选E4orf6蛋白。 In one embodiment of the second aspect, at least one protein is an E4 protein, preferably an E4orf6 protein. the
在第二方面的一个实施方案中,至少一种蛋白是E1A蛋白,优选 E1A12S蛋白。 In one embodiment of the second aspect, at least one protein is an E1A protein, preferably an E1A12S protein. the
在第二方面的一个优选的实施方案中,至少一种蛋白是E1B蛋白和E4蛋白的组合,优选E1B55kD蛋白和E4orf6蛋白的组合。 In a preferred embodiment of the second aspect, at least one protein is a combination of E1B protein and E4 protein, preferably a combination of E1B55kD protein and E4orf6 protein. the
在第二方面的一个实施方案中,至少一种蛋白是E1B蛋白和E1A蛋白的组合,优选E1B55kD蛋白和E1A12S蛋白的组合。 In one embodiment of the second aspect, at least one protein is a combination of an E1B protein and an E1A protein, preferably a combination of an E1B55kD protein and an E1A12S protein. the
在第二方面的一个优选的实施方案中,至少一种蛋白是E4蛋白和E1A蛋白的组合,优选E4orf6蛋白和E1A12S蛋白的组合。 In a preferred embodiment of the second aspect, at least one protein is a combination of E4 protein and E1A protein, preferably a combination of E4orf6 protein and E1A12S protein. the
在第二方面的一个实施方案中,至少一种蛋白是E1B蛋白、E4蛋白和E1A蛋白的组合,优选E1B55kD蛋白、E4orf6蛋白和E1A12S蛋白的组合。 In one embodiment of the second aspect, at least one protein is a combination of E1B protein, E4 protein and E1A protein, preferably a combination of E1B55kD protein, E4orf6 protein and E1A12S protein. the
在第二方面的一个实施方案中,E1B蛋白的表达由启动子控制,其中所述的启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其中所述的腺病毒启动子与E1B启动子不同。 In one embodiment of the second aspect, the expression of the E1B protein is controlled by a promoter, wherein the promoter is selected from the group consisting of tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterogeneous A set of a source promoter and an adenoviral promoter, wherein the adenoviral promoter is different from the E1B promoter. the
在第二方面的一个实施方案中,E4蛋白的表达由启动子控制,其中所述的启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其中所述的腺病毒启动子与E4启动子不同。 In one embodiment of the second aspect, the expression of the E4 protein is controlled by a promoter, wherein the promoter is selected from the group consisting of tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterogeneous A set of a source promoter and an adenoviral promoter, wherein said adenoviral promoter is different from the E4 promoter. the
在第二个方面的一个优选实施方案中,腺病毒的启动子是E1A启动子。 In a preferred embodiment of the second aspect, the promoter of the adenovirus is the E1A promoter. the
在第二个方面的一个实施方案中,E1A蛋白质的表达由启动子控制,其中所述启动子选自包括下列的组:肿瘤-特异性启动子、器官-特异性启动子、组织-特异性启动子、异源启动子和腺病毒的启动子,其中腺病毒的启动子不同于E1A启动子。 In one embodiment of the second aspect, the expression of the E1A protein is controlled by a promoter, wherein said promoter is selected from the group comprising: tumor-specific promoters, organ-specific promoters, tissue-specific promoters Promoters, heterologous promoters, and adenoviral promoters, wherein the adenoviral promoter is different from the E1A promoter. the
在第二方面的一个优选的实施方案中,控制E1A蛋白的表达的启动子是YB-1控制的,或可以由YB-1调控的。 In a preferred embodiment of the second aspect, the promoter controlling the expression of the E1A protein is controlled by YB-1, or may be regulated by YB-1. the
在第二方面的一个优选的实施方案中,控制E1A蛋白的表达的启动子是腺病毒2晚期启动子。
In a preferred embodiment of the second aspect, the promoter controlling the expression of the E1A protein is the
在第一和第二方面的一个实施方案中,E4蛋白、优选地E4orf6蛋白和E1B蛋白、优选地E1B55kd蛋白在相同或共同启动子的控制下。 In one embodiment of the first and second aspects, the E4 protein, preferably the E4orf6 protein and the E1B protein, preferably the E1B55kd protein are under the control of the same or a common promoter. the
本发明解决的问题的第三方面是通过腺病毒解决的,其中所述的腺病毒通过至少一种腺病毒蛋白在核中提供了YB-1,或者核中的YB-1供应是由至少一种腺病毒蛋白介导的,其中所述的腺病毒蛋白优选地与E1A不同。 The third aspect of the problem solved by the present invention is solved by adenovirus, wherein said adenovirus provides YB-1 in the nucleus through at least one adenovirus protein, or YB-1 supply in the nucleus is provided by at least one mediated by an adenoviral protein, wherein said adenoviral protein is preferably different from E1A. the
在第三方面的一个实施方案中,该腺病毒是根据本发明第一和/或第二方面的腺病毒。 In one embodiment of the third aspect, the adenovirus is an adenovirus according to the first and/or second aspect of the invention. the
本发明解决的问题的第四方面是通过腺病毒解决的,其中所述的腺病毒通过至少一种腺病毒蛋白为腺病毒的复制提供了YB-1,或者通过至少一种腺病毒蛋白介导用于腺病毒的复制的YB-1的提供,其中所述的腺病毒蛋白优选地与E1A不同。 The fourth aspect of the problem solved by the present invention is solved by adenovirus, wherein said adenovirus provides YB-1 for the replication of adenovirus through at least one adenovirus protein, or mediated by at least one adenovirus protein The provision of YB-1 for the replication of adenovirus, wherein said adenovirus protein is preferably different from E1A. the
在第四方面的一个实施方案中,该腺病毒是根据本发明第一和/或第二和/或第三方面的腺病毒。 In one embodiment of the fourth aspect, the adenovirus is an adenovirus according to the first and/or second and/or third aspect of the invention. the
在第三和第四方面的一个实施方案中,腺病毒蛋白是E4orf6和E1B55kd的复合物。 In one embodiment of the third and fourth aspects, the adenoviral protein is a complex of E4orf6 and E1B55kd. the
本发明解决的问题的第五方面是通过腺病毒解决的,其中所述的腺病毒的核酸包含至少一个功能上无活性的腺病毒区域,其中所述的区域选自包含E1区、E3区、E4区及其组合的组。 The fifth aspect of the problem solved by the present invention is solved by adenovirus, wherein the nucleic acid of the adenovirus contains at least one functionally inactive adenovirus region, wherein the region is selected from the group consisting of E1 region, E3 region, Groups of E4 regions and combinations thereof. the
在第五个方面的一个实施方案中,所述腺病毒是按照本发明的第一个和/或第二个和/或第三个和/或第四个方面的腺病毒。 In one embodiment of the fifth aspect, said adenovirus is an adenovirus according to the first and/or second and/or third and/or fourth aspects of the invention. the
在第五方面的一个实施方案中,该区是E1区。 In one embodiment of the fifth aspect, the region is the El region. the
在第五方面的一个实施方案中,该区是E3区。 In one embodiment of the fifth aspect, the region is the E3 region. the
在第五方面的一个实施方案中,该区是E4区。 In one embodiment of the fifth aspect, the region is the E4 region. the
在第五方面的一个实施方案中,该区包含E1区、E3区和E4区。 In one embodiment of the fifth aspect, the region comprises an El region, an E3 region and an E4 region. the
本发明解决的问题的第六方面是通过腺病毒解决的,其中所述的腺病毒包含至少一个表达盒,其中所述的表达盒包含至少一个启动子和编码腺病毒蛋白的核酸,其中所述的腺病毒蛋白是E1B蛋白,优选E1B55kD蛋白。 The sixth aspect of the problem to be solved by the present invention is solved by an adenovirus, wherein said adenovirus comprises at least one expression cassette, wherein said expression cassette comprises at least one promoter and a nucleic acid encoding an adenoviral protein, wherein said The adenovirus protein is E1B protein, preferably E1B55kD protein. the
在第六方面的一个实施方案中,该腺病毒是根据本发明第一和/或第二和/或第三和/或第四和/或第五方面的腺病毒。 In one embodiment of the sixth aspect, the adenovirus is an adenovirus according to the first and/or second and/or third and/or fourth and/or fifth aspects of the invention. the
在第六方面的一个实施方案中,该启动子与E1B启动子不同。 In one embodiment of the sixth aspect, the promoter is different from the E1B promoter. the
在第六方面的一个实施方案中,该启动子是选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒 启动子的组,其中所述的启动子与E1B启动子不同。 In one embodiment of the sixth aspect, the promoter is selected from the group comprising tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenoviral promoters, The promoter described therein is different from the E1B promoter. the
本发明解决的问题的第七方面是通过腺病毒解决的,其中所述的腺病毒包含至少一个表达盒,其中所述的表达盒包含至少一个启动子和编码腺病毒蛋白的核酸,其中所述的腺病毒蛋白是E4蛋白,优选E4orf6蛋白。 The seventh aspect of the problem to be solved by the present invention is solved by an adenovirus, wherein said adenovirus comprises at least one expression cassette, wherein said expression cassette comprises at least one promoter and a nucleic acid encoding an adenoviral protein, wherein said The adenovirus protein is E4 protein, preferably E4orf6 protein. the
在第七个方面的一个实施方案中,所述腺病毒是根据本发明的第一个和/或第二个和/或第三个和/或第四个和/或第五个和/或第六个方面的腺病毒。 In one embodiment of the seventh aspect, said adenovirus is the first and/or second and/or third and/or fourth and/or fifth and/or Sixth aspect of adenovirus. the
在第七方面的一个实施方案中,该启动子与E4启动子不同。 In one embodiment of the seventh aspect, the promoter is different from the E4 promoter. the
在第七方面的一个实施方案中,该启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其中腺病毒启动子与E4启动子不同。 In one embodiment of the seventh aspect, the promoter is selected from the group comprising tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenoviral promoters, wherein The adenovirus promoter is different from the E4 promoter. the
在第七方面的一个实施方案中,该启动子是E1A启动子。 In one embodiment of the seventh aspect, the promoter is an E1A promoter. the
本发明解决的问题的第八方面是通过腺病毒解决的,其中所述的腺病毒包含至少一个表达盒,其中所述的表达盒包含至少一个启动子和编码腺病毒蛋白的核酸,其中所述的腺病毒蛋白是E1A蛋白,优选E1A12S蛋白。 The eighth aspect of the problem to be solved by the present invention is solved by an adenovirus, wherein said adenovirus comprises at least one expression cassette, wherein said expression cassette comprises at least one promoter and a nucleic acid encoding an adenoviral protein, wherein said The adenovirus protein is E1A protein, preferably E1A12S protein. the
在第八方面的一个实施方案中,该腺病毒是根据本发明第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七方面的腺病毒。 In one embodiment of the eighth aspect, the adenovirus is according to the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh aspects of the present invention of adenovirus. the
在第八方面的一个实施方案中,该启动子与E1A启动子不同。 In one embodiment of the eighth aspect, the promoter is different from the E1A promoter. the
在第八方面的一个实施方案中,该启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组。 In one embodiment of the eighth aspect, the promoter is selected from the group comprising tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenoviral promoters. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒包含核酸,其中所述的核酸编码YB-1。 In one embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus comprises nucleic acid , wherein said nucleic acid encodes YB-1. the
在第八方面的一个优选的实施方案中,编码YB-1的核酸在启动子的控制下,其中所述的启动子优选地是E2晚期启动子。 In a preferred embodiment of the eighth aspect, the nucleic acid encoding YB-1 is under the control of a promoter, wherein said promoter is preferably an E2 late promoter. the
在第八方面的一个实施方案中,编码YB-1的核酸在启动子的控制下,其中所述的启动子分别是YB-1依赖性的和YB-1控制的。 In one embodiment of the eighth aspect, the nucleic acid encoding YB-1 is under the control of a promoter, wherein said promoters are YB-1 dependent and YB-1 controlled, respectively. the
在第八方面的一个实施方案中,编码YB-1的核酸是表达盒的一部分,所述的表达盒包含编码E1A蛋白的核酸,优选编码E1A12S蛋白的核酸。 In one embodiment of the eighth aspect, the nucleic acid encoding YB-1 is part of an expression cassette comprising a nucleic acid encoding an E1A protein, preferably a nucleic acid encoding an E1A12S protein. the
在第八方面的一个实施方案中,编码E1A蛋白的核酸是通过IRES序列从编码YB-1的核酸分离出。 In one embodiment of the eighth aspect, the nucleic acid encoding the E1A protein is separated from the nucleic acid encoding YB-1 by an IRES sequence. the
在第六和/或第七和/或第八方面的一个实施方案中,编码E4蛋白、优选E4orf6蛋白的核酸和编码E1B蛋白、优选E1B55kD蛋白的核酸都包含在表达盒中,其中两个编码序列优选地通过IRES序列分开。 In one embodiment of the sixth and/or seventh and/or eighth aspects, the nucleic acid encoding an E4 protein, preferably an E4orf6 protein, and the nucleic acid encoding an E1B protein, preferably an E1B55kD protein, are contained in an expression cassette, wherein two encoding The sequences are preferably separated by IRES sequences. the
在第八方面的一个优选的实施方案中,表达盒的启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其中腺病毒启动子与E4启动子不同,也与E1B启动子不同,优选与野生型E4启动子不同,也与野生型E1B启动子不同。 In a preferred embodiment of the eighth aspect, the promoter of the expression cassette is selected from the group consisting of tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenovirus promoters The group wherein the adenovirus promoter is different from the E4 promoter and also different from the E1B promoter, preferably different from the wild type E4 promoter and also different from the wild type E1B promoter. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒包含一个表达盒,它包含一个启动子和一段核酸序列,其中所述的核酸序列选自包含适体(aptamer)、核酶、适酶(aptazyme)、反义分子和siRNA的组。 In an embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus comprises a The expression cassette comprises a promoter and a nucleic acid sequence, wherein the nucleic acid sequence is selected from the group comprising aptamer, ribozyme, aptazyme, antisense molecule and siRNA. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒包含一个表达盒,它包含一个启动子和一段核酸序列,其中所述的核酸序列是编码核酸,其中所述的核酸编码的分子选自包含肽、多肽、蛋白、抗促成素、抗体和抗体片段的组。 In an embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus comprises a An expression cassette comprising a promoter and a nucleic acid sequence, wherein said nucleic acid sequence is an encoding nucleic acid, wherein said nucleic acid encodes a molecule selected from the group consisting of peptides, polypeptides, proteins, anti-enzymes, antibodies and antibody fragments . the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒包含一个表达盒,其中所述的表达盒包含一个启动子和一个核酸序列,其中所述的核酸序列选自包含细胞凋亡诱导基因、前药基因、蛋白酶抑制剂、肿瘤抑制剂基因、细胞因子和血管生成抑制剂的组。 In an embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus comprises a Expression cassette, wherein said expression cassette comprises a promoter and a nucleic acid sequence, wherein said nucleic acid sequence is selected from the group consisting of apoptosis-inducing gene, prodrug gene, protease inhibitor, tumor suppressor gene, cytokine and blood vessel Group to generate inhibitors. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒是重组腺病毒。 In one embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus is a recombinant Adenovirus. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒是腺病毒突变体。 In an embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus is an adenovirus Virus mutant. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒是复制缺陷型。 In an embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus is replicating defective type. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒能在细胞中复制,所述细胞含有去调节的YB-1或在核中含有YB-1。 In one embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus is capable of Replicates in cells that contain deregulated YB-1 or contain YB-1 in the nucleus. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该细胞在独立于细胞周期的核中含有YB-1。 In one embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the cell is independently The nucleus of the cell cycle contains YB-1. the
在第一和/或第二和/或第三和/或第四和/或第五和/或第六和/或第七和/或第八方面的一个实施方案中,该腺病毒不包含任何E1A13S蛋白和/或该腺病毒不包含任何编码E1A13S蛋白的核酸。 In one embodiment of the first and/or second and/or third and/or fourth and/or fifth and/or sixth and/or seventh and/or eighth aspects, the adenovirus does not comprise Any E1A13S protein and/or the adenovirus does not contain any nucleic acid encoding an E1A13S protein. the
本发明解决的问题的第九方面是通过编码第一至第八方面中的任一项的腺病毒的核酸解决的。 The ninth aspect of the problems to be solved by the present invention is solved by a nucleic acid encoding the adenovirus of any one of the first to eighth aspects. the
本发明解决的问题的第十方面是通过复制系统解决的,所述的复制系统包含根据第九方面的的核酸和辅助病毒的核酸,其中所述的辅助病毒的核酸包含一个或多个根据第一至第八方面的任一项的腺病毒的表达盒。
The tenth aspect of the problem to be solved by the present invention is solved by a replication system comprising the nucleic acid according to the ninth aspect and the nucleic acid of the helper virus, wherein the nucleic acid of the helper virus comprises one or more The adenovirus expression cassette according to any one of
在第十方面的一个实施方案中,该腺病毒或编码它的核酸缺少包含在辅助病毒中的表达盒。 In one embodiment of the tenth aspect, the adenovirus or nucleic acid encoding it lacks the expression cassette comprised in the helper virus. the
本发明解决的问题的第十一方面是通过载体解决的,所述的载体包含根据第九方面的核酸和/或根据第十方面的复制系统。 The eleventh aspect of the problems to be solved by the present invention is solved by a vector comprising the nucleic acid according to the ninth aspect and/or the replication system according to the tenth aspect. the
在第十一方面的一个实施方案中,该载体是表达载体。 In one embodiment of the eleventh aspect, the vector is an expression vector. the
本发明解决的问题的第十二方面是通过腺病毒细胞解决的,所述的腺病毒细胞包含根据第一至第八方面的任一项的腺病毒和/或根据第九方面的核酸和/或根据第十方面的复制系统和/或根据第十一方面的载体。 The twelfth aspect of the problem to be solved by the present invention is solved by an adenovirus cell comprising the adenovirus according to any one of the first to eighth aspects and/or the nucleic acid according to the ninth aspect and/or Or the replication system according to the tenth aspect and/or the carrier according to the eleventh aspect. the
在第十二方面的一个实施方案中,该细胞是真核细胞,优选动物细胞,更优选哺乳动物细胞。 In one embodiment of the twelfth aspect, the cell is a eukaryotic cell, preferably an animal cell, more preferably a mammalian cell. the
在第十二方面的一个优选的实施方案中,哺乳动物细胞是选自包含小鼠、大鼠、豚鼠、猪、绵羊、山羊、牛、马、狗、猫和人的细胞的组的细胞。 In a preferred embodiment of the twelfth aspect, the mammalian cell is a cell selected from the group comprising cells of mouse, rat, guinea pig, pig, sheep, goat, cow, horse, dog, cat and human. the
本发明解决的问题的第十三方面是通过生物体、优选哺乳动物生物体解决的,所述的生物体包含根据第一至第八方面的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞,其中所述的生物体优选地选自包含小鼠、大鼠、豚鼠、猪、绵羊、山羊、牛、马、狗和猫的组。 A thirteenth aspect of the problems to be solved by the present invention is solved by an organism, preferably a mammalian organism, comprising an adenovirus according to the first to eighth aspects, a nucleic acid according to the ninth aspect, a nucleic acid according to the tenth aspect The replication system according to the eleventh aspect, the vector according to the eleventh aspect or the cell according to the twelfth aspect, wherein said organism is preferably selected from the group consisting of mice, rats, guinea pigs, pigs, sheep, goats, cows, horses, Group of dogs and cats. the
本发明解决的问题的第十四方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在复制腺病毒、优选体外地复制腺病毒中的应用。 The fourteenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the Use of the vector of the eleventh aspect or the cell according to the twelfth aspect for replicating an adenovirus, preferably in vitro. the
本发明解决的问题的第十五方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在生产腺病毒、优选体外地生产腺病毒中的应用。 The fifteenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the Use of the vector of the eleventh aspect or the cell according to the twelfth aspect for the production of adenovirus, preferably in vitro. the
本发明解决的问题的第十六方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在表达基因中的应用,优选所述基因促进细胞裂解,优选是在腺病毒复制过程中的细胞裂解,和/或促进腺病毒介导的细胞裂解。 The sixteenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the Use of the vector of the eleventh aspect or the cell according to the twelfth aspect for expressing a gene, preferably said gene promotes cell lysis, preferably during adenovirus replication, and/or promotes adenovirus-mediated cell lysis crack. the
在第十六方面的一个实施方案中,表达的基因是本文中公开的转基因。 In one embodiment of the sixteenth aspect, the expressed gene is a transgene disclosed herein. the
本发明解决的问题的第十七方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在制备药物中的应用。 The seventeenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the Use of the carrier according to the eleventh aspect or the cell according to the twelfth aspect in the preparation of a medicament. the
在第十四至十七方面的一个实施方案中,腺病毒在其中复制的细胞在其核中含有YB-1,优选在其独立于细胞周期的核中含有YB-1。 In one embodiment of the fourteenth to seventeenth aspects, the cell in which the adenovirus replicates contains YB-1 in its nucleus, preferably YB-1 in its cell cycle independent nucleus. the
在第十四至十七方面的一个实施方案中,腺病毒在其中复制的细胞包含去调节的YB-1。 In one embodiment of the fourteenth to seventeenth aspects, the cell in which the adenovirus replicates comprises deregulated YB-1. the
在第十七方面的应用的一个实施方案中,该药物用于治疗肿瘤病。 In one embodiment of the use of the seventeenth aspect, the medicament is for the treatment of neoplastic diseases. the
在第十七方面的应用的一个优选的实施方案中,该肿瘤病选自包含恶性病、癌症、癌性病和肿瘤的组。 In a preferred embodiment of the use of the seventeenth aspect, the neoplastic disease is selected from the group comprising malignant disease, cancer, cancerous venereal disease and tumor. the
在第十七方面的应用的一个实施方案中,该肿瘤病选自包含实体瘤、非实体瘤、恶性瘤和良性瘤的组。 In one embodiment of the use of the seventeenth aspect, the neoplastic disease is selected from the group comprising solid tumors, non-solid tumors, malignant tumors and benign tumors. the
在第十七方面的应用的一个实施方案中,至少一部分形成肿瘤的细胞在核中具有YB-1,优选在独立于细胞周期的核中具有YB-1。 In one embodiment of the use of the seventeenth aspect, at least a part of the tumor-forming cells has YB-1 in the nucleus, preferably YB-1 in the nucleus independent of the cell cycle. the
在第十七方面的应用的一个实施方案中,至少一部分形成肿瘤的细胞包含去调节的YB-1。 In one embodiment of the use of the seventeenth aspect, at least a portion of the tumor-forming cells comprise deregulated YB-1. the
在第十七方面的应用的一个实施方案中,至少一部分形成肿瘤的细胞是Rb阳性的或Rb阴性的。 In one embodiment of the use of the seventeenth aspect, at least a portion of the tumor-forming cells are Rb positive or Rb negative. the
在第十七方面的应用的一个实施方案中,至少一部分形成肿瘤的细胞具有对药学活性剂的抗性,优选多种抗性。 In one embodiment of the use of the seventeenth aspect, at least a portion of the tumor-forming cells are resistant, preferably resistant, to a pharmaceutically active agent. the
在第十七方面的应用的一个实施方案中,该抗性是多种抗性。 In one embodiment of the use of the seventeenth aspect, the resistance is multiple resistance. the
在第十七方面的应用的一个实施方案中,该抗性是对抗肿瘤药的,优选细胞抑制剂,和/或该抗性是由辐照造成的。 In one embodiment of the use of the seventeenth aspect, the resistance is to an antineoplastic agent, preferably a cytostatic agent, and/or the resistance is caused by irradiation. the
在第十七方面的应用的一个实施方案中,药物的目标患者包含许多细胞,其中所述的细胞是在根据本发明的第十七方面的应用的各个实施方案中所述的细胞。 In one embodiment of the use of the seventeenth aspect, the target patient of the medicament comprises a plurality of cells, wherein said cells are the cells described in each embodiment of the use according to the seventeenth aspect of the present invention. the
在第十七方面的应用的一个实施方案中,该药物包含至少一种其它的药学活性剂。 In one embodiment of the use of the seventeenth aspect, the medicament comprises at least one other pharmaceutically active agent. the
在第十七方面的应用的一个实施方案中,该药物与一种其它的药学活性剂一起施用,或应如此。 In one embodiment of the use of the seventeenth aspect, the medicament is or should be administered together with an other pharmaceutically active agent. the
在第十七方面的应用的一个实施方案中,其它的药学活性剂选自包含细胞因子、金属蛋白酶抑制剂、血管生成抑制剂、细胞抑制剂、酪氨酸激酶抑制剂和细胞周期抑制剂的组。 In one embodiment of the use of the seventeenth aspect, the other pharmaceutically active agent is selected from the group consisting of cytokines, metalloproteinase inhibitors, angiogenesis inhibitors, cytostatics, tyrosine kinase inhibitors and cell cycle inhibitors Group. the
在第十七方面的应用的一个实施方案中,该药物是在辐照之前、过程中或之后施用。 In one embodiment of the use of the seventeenth aspect, the medicament is administered before, during or after irradiation. the
在第十七方面的应用的一个实施方案中,该辐照的施用目的是治疗肿瘤。 In one embodiment of the use of the seventeenth aspect, the radiation is administered for the purpose of treating a tumor. the
在第十七方面的应用的一个实施方案中,对要治疗的细胞或生物体采取措施,其中所述的措施选自包含辐照、施用细胞抑制剂和高热疗法的组。 In one embodiment of the use of the seventeenth aspect, a measure is taken on the cell or organism to be treated, wherein said measure is selected from the group comprising irradiation, administration of cytostatic agents and hyperthermia. the
在第十七方面的应用的一个实施方案中,该措施是局部地或全身地应用。 In one embodiment of the use of the seventeenth aspect, the measure is a local or systemic application. the
在第十七方面的应用的一个实施方案中,该辐照使用高能辐照,优选使用在治疗肿瘤病中使用的任何辐照。 In one embodiment of the use of the seventeenth aspect, the irradiation uses high energy irradiation, preferably any irradiation used in the treatment of neoplastic diseases. the
本发明解决的问题的第十八方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在制备用于治疗肿瘤病的药物中的应用,其特征在于,该肿瘤病选自包含乳腺瘤、骨瘤、胃瘤、肠瘤、胆囊瘤、胰腺瘤、肝肿瘤、肾肿瘤、脑瘤、卵巢肿瘤、皮肤瘤、皮肤附属物的肿瘤、头和颈癌、子宫瘤、关节瘤、喉瘤、食管瘤、舌瘤、前列腺瘤的组,优选地前述肿瘤病中的一种具有前述权利要求中的任一项所述的特征。 The eighteenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the The application of the carrier according to the eleventh aspect or the cell according to the twelfth aspect in the preparation of a drug for treating tumor diseases, characterized in that the tumor diseases are selected from the group consisting of breast tumors, bone tumors, gastric tumors, intestinal tumors, and gallbladder tumors. , tumors of the pancreas, tumors of the liver, tumors of the kidney, brain tumors, ovarian tumors, skin tumors, tumors of the skin appendages, head and neck cancers, uterine tumors, joint tumors, laryngeal tumors, esophageal tumors, tongue tumors, prostate tumors, Preferably one of the aforementioned neoplastic diseases has the features of any of the preceding claims. the
本发明解决的问题的第十九方面是通过下述方式解决的:根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞在制备用于治疗肿瘤病的药物中的应用,其中所述的肿瘤特异性的启动子是对该药物要施用的肿瘤特异性的启动子。 The nineteenth aspect of the problems to be solved by the present invention is solved by the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replication system according to the tenth aspect, the The use of the carrier according to the eleventh aspect or the cell according to the twelfth aspect in the preparation of a drug for treating tumor diseases, wherein the tumor-specific promoter is a tumor-specific promoter to which the drug is to be administered. the
本发明解决的问题的第二十方面是通过一种药物组合物解决的,它包含根据第一至第八方面的任一项的腺病毒、根据第九方面的核酸、根据第十方面的复制系统、根据第十一方面的载体或根据第十二方面的细胞,和任选的药用载体。 The twentieth aspect of the problems to be solved by the present invention is solved by a pharmaceutical composition comprising the adenovirus according to any one of the first to eighth aspects, the nucleic acid according to the ninth aspect, the replicator according to the tenth aspect A system, a vector according to the eleventh aspect or a cell according to the twelfth aspect, and optionally a pharmaceutically acceptable carrier. the
在第二十一个方面中,本发明的问题通过病毒,优选地腺病毒在制备药物中的应用而得以解决,其中所述病毒分别在细胞核中不包含YB-1的正常细胞中、在独立于细胞周期的细胞核中不包含YB-1的细胞中、和在不包含去调节的YB-1的细胞中是复制缺陷的,并且所述病毒编码癌基因或癌基因产物,特别是在YB-1细胞核阳性细胞中至少反式激活一个病毒基因,优选腺病毒基因的癌基因蛋白质,其中所述基因选自包括E1B55kDa、E4orf6、E4orf3和E3ADP的组。优选地,所述病毒表达病毒蛋白质E1B55kD,其在本文也表示为E1B55kDa和E4orf6。 In the twenty-first aspect, the problems of the present invention are solved by using a virus, preferably an adenovirus, in the preparation of a medicament, wherein the virus is in a normal cell that does not contain YB-1 in the nucleus, in an independent Replication-deficient in cells that do not contain YB-1 in the nucleus of the cell cycle, and in cells that do not contain deregulated YB-1, and the virus encodes an oncogene or oncogene product, particularly in YB-1 1 An oncogene protein that transactivates at least one viral gene, preferably an adenoviral gene, in a nucleus-positive cell, wherein said gene is selected from the group comprising E1B55kDa, E4orf6, E4orf3 and E3ADP. Preferably, the virus expresses the viral proteins E1B55kD, also denoted herein as E1B55kDa and E4orf6. the
在第二十二个方面中,本发明的问题通过病毒,优选地腺病毒在细胞中进行复制的应用而得以解决,所述细胞在细胞核中包含YB-1,其中所述病毒在细胞核中不包含YB-1的细胞中、或在独立于细胞周期的细胞核中不包含YB-1的细胞中、或在不包含任何去调节的YB-1的细胞中是复制缺陷的,其中所述病毒编码癌基因或癌基因产物,特别是反式激活至少 一个病毒基因,优选腺病毒基因的癌基因蛋白质,其中所述基因选自包括E1B55kDa、E4orf6、E4orf3和E3ADP的组。 In a twenty-second aspect, the problems of the present invention are solved by the use of a virus, preferably an adenovirus, for replication in a cell comprising YB-1 in the nucleus, wherein the virus does not Replication-deficient in cells comprising YB-1, or in cells that do not contain YB-1 in the cell cycle-independent nucleus, or in cells that do not contain any deregulated YB-1, wherein the virus encodes An oncogene or an oncogene product, in particular an oncogene protein that transactivates at least one viral gene, preferably an adenoviral gene, wherein said gene is selected from the group comprising E1B55kDa, E4orf6, E4orf3 and E3ADP. the
在按照本发明的第二十一和第二十二个方面应用的一个实施方案中,病毒,特别是腺病毒在细胞中复制,所述细胞在细胞核中包含YB-1或在独立于细胞周期的细胞核中不包含YB-1,或不包括任何去调节的YB-1。 In one embodiment of use according to the twenty-first and twenty-second aspects of the invention, the virus, in particular an adenovirus, replicates in a cell that contains YB-1 in the nucleus or in a cell cycle-independent The nuclei of cells did not contain YB-1, or did not include any deregulated YB-1. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,病毒癌基因蛋白质是E1A和/或癌基因是编码E1A的基因和/或癌基因蛋白质是E1A。 In another embodiment applied according to the twenty-first and twenty-second aspects of the present invention, the viral oncogene protein is E1A and/or the oncogene is a gene encoding E1A and/or the oncogene protein is E1A. the
在一个优选的实施方案中,病毒癌基因蛋白质E1A能结合功能性的Rb肿瘤抑制基因产物。 In a preferred embodiment, the viral oncogene protein E1A is capable of binding a functional Rb tumor suppressor gene product. the
在一个备选的实施方案中,病毒癌基因蛋白质E1A不能结合功能性的Rb肿瘤抑制基因产物。 In an alternative embodiment, the viral oncogene protein E1A is unable to bind a functional Rb tumor suppressor gene product. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,病毒癌基因蛋白质E1A不诱导YB-1的细胞核定位。 In another embodiment applied in accordance with the twenty-first and twenty-second aspects of the present invention, the viral oncogene protein E1A does not induce the nuclear localization of YB-1. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,药物是施用于细胞是Rb阳性或Rb阴性的患者。 In another embodiment for use in accordance with the twenty-first and twenty-second aspects of the invention, the medicament is administered to a patient whose cells are Rb positive or Rb negative. the
在一个优选的实施方案中,所述细胞是那些参与受所述药物影响的病症形成的细胞。 In a preferred embodiment, said cells are those cells involved in the development of the condition affected by said drug. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,所述细胞在细胞核中是Rb阴性或YB-1阳性的,特别是在独立于细胞周期的细胞核中是YB-1阳性。 In another embodiment for use according to the twenty-first and twenty-second aspects of the invention, said cells are Rb-negative or YB-1-positive in the nucleus, especially in the nucleus independent of the cell cycle Is YB-1 positive. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,所述药物用来治疗肿瘤。 In another embodiment of use according to the twenty-first and twenty-second aspects of the invention, the medicament is used to treat tumors. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,所述细胞,特别是形成肿瘤或其部分的细胞,是有抵抗力的,特别是对药物具有多重抗性,所述药物优选地是抗肿瘤剂,更优选地是细胞抑制剂。 In another embodiment of use according to the twenty-first and twenty-second aspects of the present invention, said cells, in particular cells forming tumors or parts thereof, are resistant, in particular to drugs with multiple Resistance, the drug is preferably an antineoplastic agent, more preferably a cytostatic agent. the
在按照本发明的第二十一和第二十二个方面应用的一个优选实施方案中,细胞表达,优选地过度表达膜结合转运蛋白质P-糖蛋白和/或MRP。 In a preferred embodiment for use according to the twenty-first and twenty-second aspects of the invention, the cell expresses, preferably overexpresses, the membrane bound transport proteins P-glycoprotein and/or MRP. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案 中,细胞是p53阳性或p53阴性的。 In another embodiment for use in accordance with the twenty-first and twenty-second aspects of the invention, the cells are p53 positive or p53 negative. the
在按照本发明的第二十一和第二十二个方面应用的一个实施方案中,与野生型癌基因蛋白质E1A相比,癌基因蛋白质包括一个或几个突变或缺失,其中所述缺失优选地是选自包括CR3区的缺失和N端缺失和C端缺失的组中的那些。意欲E1A癌基因蛋白质能结合Rb。 In one embodiment of use according to the twenty-first and twenty-second aspects of the invention, the oncogene protein comprises one or several mutations or deletions compared to the wild-type oncogene protein E1A, wherein said deletion is preferably are those selected from the group comprising deletions of the CR3 region and N-terminal deletions and C-terminal deletions. It is intended that the E1A oncogene protein can bind Rb. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,与野生型癌基因蛋白质相比,癌基因蛋白质包括一个或几个突变或缺失,其中所述缺失是在CR1区和/或CR2区中优选的一个。意欲癌基因蛋白质E1A不能结合Rb。 In another embodiment applied according to the twenty-first and twenty-second aspects of the invention, the oncogene protein comprises one or more mutations or deletions compared to the wild-type oncogene protein, wherein said deletion is The preferred one in the CR1 region and/or the CR2 region. It is intended that the oncogene protein E1A cannot bind Rb. the
在按照本发明的第二十一和第二十二个方面应用的一个实施方案中,病毒癌基因蛋白质,特别是E1A,是在组织特异性和/或肿瘤特异性启动子控制下。 In one embodiment applied according to the twenty-first and twenty-second aspects of the invention, the viral oncogene protein, in particular ElA, is under the control of a tissue-specific and/or tumor-specific promoter. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,病毒,特别是腺病毒编码YB-1。 In another embodiment applied according to the twenty-first and twenty-second aspects of the invention, the virus, in particular the adenovirus, encodes YB-1. the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,YB-1是在组织特异性和/或肿瘤特异性启动子控制下。 In another embodiment for use in accordance with the twenty-first and twenty-second aspects of the invention, YB-1 is under the control of a tissue-specific and/or tumor-specific promoter. the
在按照本发明的第二十一和第二十二个方面应用的一个优选实施方案中,病毒,特别是腺病毒,编码选自包括E4orf6、E4orf3、E1B55k和腺病毒的E3ADP蛋白质的组中的至少一个蛋白质。 In a preferred embodiment of the application according to the twenty-first and twenty-second aspects of the present invention, the virus, particularly the adenovirus, encodes a protein selected from the group consisting of E4orf6, E4orf3, E1B55k and the E3ADP protein of adenovirus at least one protein. the
在按照本发明的第二十一和第二十二个方面应用的一个备选实施方案中,细胞在细胞核中包含YB-1,特别是形成肿瘤或其部分的细胞在细胞核中包括YB-1。 In an alternative embodiment for use in accordance with the twenty-first and twenty-second aspects of the invention, the cells comprise YB-1 in the nucleus, in particular cells forming a tumor or part thereof comprise YB-1 in the nucleus . the
在按照本发明的第二十一和第二十二个方面应用的另一个实施方案中,在诱导将YB-1转运进入细胞核后,肿瘤在细胞核中包含YB-1。 In another embodiment for use in accordance with the twenty-first and twenty-second aspects of the invention, the tumor comprises YB-1 in the nucleus after inducing translocation of YB-1 into the nucleus. the
在按照本发明的第二十一和第二十二个方面应用的一个优选实施方案中,YB-1向细胞核的转运是由至少一个方法引起的,其中所述方法选自包括辐射、施用细胞抑制剂和过热疗法的组。 In a preferred embodiment for use in accordance with the twenty-first and twenty-second aspects of the present invention, the translocation of YB-1 to the nucleus is caused by at least one method selected from the group consisting of radiation, administration of cells Group of inhibitors and hyperthermia. the
在按照本发明的第二十一和第二十二个方面应用的一个特别优选实施方案中,将所述方法施用于细胞、器官或生物体。 In a particularly preferred embodiment of use according to the twenty-first and twenty-second aspects of the invention, the method is applied to a cell, organ or organism. the
在按照本发明的第二十一和第二十二个方面应用的一个优选实施方案 中,病毒,特别是腺病毒,选自包括下列的组:AdΔ24、dl922-947、E1Ad/01/07、dl1119/1131、CB 016、dl520和缺乏表达的病毒E1A癌基因的病毒,所述病毒E1A癌基因能结合功能性Rb肿瘤抑制基因产物。 In a preferred embodiment for use according to the twenty-first and twenty-second aspects of the invention, the virus, in particular an adenovirus, is selected from the group comprising: AdΔ24, d1922-947, E1Ad/01/07, dl1119/1131, CB 016, dl520, and viruses lacking an expressed viral E1A oncogene that binds a functional Rb tumor suppressor gene product. the
在第二十三个方面中,问题通过病毒,优选地腺病毒在制备药物中的应用而得以解决,其中所述病毒,特别是腺病毒是适合的使得复制经过或通过YB-1介导的E2-晚期启动子的活化得到控制,优选地主要通过E2-晚期启动子的活化得到控制。在一个实施方案中,YB-1是转基因的YB-1或细胞的YB-1,特别是细胞的去调节的YB-1或去调节的YB-1。转基因的YB-1优选地是在细胞中通过载体,特别是通过一个或所述腺病毒表达的YB-1。E2-晚期启动子优选地是如包含在野生型腺病毒中的腺病毒E2-晚期启动子或如与本文描述的转基因表达相关使用的E2-晚期启动子。 In a twenty-third aspect, the problem is solved by the use of a virus, preferably an adenovirus, for the preparation of a medicament, wherein said virus, in particular an adenovirus, is adapted such that replication is via or mediated by YB-1 Activation of the E2-late promoter is controlled, preferably primarily by activation of the E2-late promoter. In one embodiment, YB-1 is transgenic YB-1 or cellular YB-1, in particular cellular deregulated YB-1 or deregulated YB-1. The transgenic YB-1 is preferably YB-1 expressed in cells by a vector, especially by one or said adenovirus. The E2-late promoter is preferably an adenovirus E2-late promoter as contained in a wild-type adenovirus or as used in connection with transgene expression as described herein. the
在第二十四个方面中,问题通过病毒,特别是腺病毒在细胞中复制的应用而得以解决,所述细胞在细胞核中包含YB-1,其中所述病毒,特别是腺病毒是适合的使得复制通过E2晚期启动子的活化,优选地主要通过E2晚期启动子的活化来由YB-1进行控制。在一个实施方案中,YB-1是转基因的YB-1或细胞的YB-1,特别是细胞的去调节的或去调节的YB-1。转基因的YB-1优选地是通过载体在细胞中表达的YB-1,所述载体特别是是一个或所述腺病毒。E2-晚启动子优选地是如在野生型腺病毒中存在的腺病毒E2-晚期启动子,或如与本文描述的转基因的表达相关使用的E2-晚期启动子。 In a twenty-fourth aspect, the problem is solved by the use of viruses, especially adenoviruses, for replication in cells comprising YB-1 in the nucleus, wherein said viruses, especially adenoviruses are suitable Replication is allowed to be controlled by YB-1 through activation of the E2 late promoter, preferably primarily through activation of the E2 late promoter. In one embodiment, YB-1 is transgenic YB-1 or cellular YB-1, in particular cellular deregulated or deregulated YB-1. The transgenic YB-1 is preferably YB-1 expressed in cells by a vector, in particular one or said adenovirus. The E2-late promoter is preferably the adenovirus E2-late promoter as present in wild-type adenovirus, or the E2-late promoter as used in connection with the expression of the transgenes described herein. the
在本发明的第二十三和/或二十四方面的一个优选实施方案中,如本文公开的所述腺病毒是适合的,特别适合的,使得其可按照本发明来使用。 In a preferred embodiment of the twenty-third and/or twenty-fourth aspect of the invention, said adenovirus as disclosed herein is suitable, particularly suitable, such that it can be used according to the invention. the
在第二十五个方面,问题通过病毒的癌基因蛋白质,特别是一个分离的病毒癌基因蛋白质得以解决,其中所述病毒癌基因蛋白质具有如下特征: In a twenty-fifth aspect, the problem is solved by a viral oncoprotein, in particular an isolated viral oncoprotein, wherein said viral oncoprotein is characterized by:
a)在YB-1细胞核阳性细胞中至少一个病毒基因的反式激活,所述基因选自包括下列的组:E1B55k、E3ADP和E4orf6和E4orf4; a) transactivation of at least one viral gene selected from the group comprising: E1B55k, E3ADP and E4orf6 and E4orf4 in YB-1 nucleus-positive cells;
和 and
b)在细胞核中。特别是在存在病毒癌基因蛋白质的细胞的细胞核中没有YB-1的诱导。 b) In the nucleus. In particular, there was no induction of YB-1 in the nuclei of cells where the viral oncogene protein was present. the
是腺病毒的核酸在制备药物中的应用而得以解决,其中所述病毒是适合的,使得复制经过E2-晚期启动子的活化,优选主要经E2-晚期启动子的活化由YB-1进行控制。在一个实施方案中,YB-1是转基因的YB-1或细胞的,特别是细胞的去调节的,或去调节的YB-1。转基因的YB-1优选地是通过载体,特别是通过一个或所述腺病毒在细胞中进行表达的YB-1。E2-晚期启动子优选地是腺病毒E2-晚期启动子诸如包含在野生型腺病毒中的E2-晚期启动子,或如与本文描述的转基因表达相关使用的E2-晚期启动子。 The solution is the use of the nucleic acid of an adenovirus for the preparation of a medicament, wherein said virus is suitable such that replication is controlled by YB-1 via activation of the E2-late promoter, preferably mainly via the activation of the E2-late promoter . In one embodiment, YB-1 is transgenic YB-1 or a cell, in particular a deregulated cell, or a deregulated YB-1. The transgenic YB-1 is preferably YB-1 expressed in cells by a vector, especially by one or said adenovirus. The E2-late promoter is preferably an adenoviral E2-late promoter such as that contained in wild-type adenovirus, or an E2-late promoter as used in connection with transgene expression as described herein. the
在第三十个方面中,问题通过编码如按照本发明使用的病毒,特别是腺病毒的核酸在细胞中复制中的应用而得以解决,其中所述病毒是适合的使得复制经过E2-晚期启动子的活化,优选主要经过E2-晚期启动子的活化由YB-1进行控制。在一个实施方案中,YB-1是转基因的YB-1或细胞的,特别是细胞的去调节的YB-1。转基因的YB-1优选地是通过载体,优选地通过一个或所述腺病毒在细胞中进行表达的YB-1。E2-晚期启动子优选地是如在野生型腺病毒中存在的腺病毒E2-晚期启动子,或如与本文描述的转基因表达相关使用的E2-晚期启动子。 In a thirtieth aspect, the problem is solved by the use of a nucleic acid encoding a virus as used according to the invention, in particular an adenovirus, for replication in a cell, wherein said virus is adapted such that replication is initiated via E2-late Activation of promoters, preferably mainly through activation of E2-late promoters, is controlled by YB-1. In one embodiment, YB-1 is transgenic YB-1 or cellular, especially cellular, deregulated YB-1. The transgenic YB-1 is preferably YB-1 expressed in cells by a vector, preferably by one or said adenovirus. The E2-late promoter is preferably an adenovirus E2-late promoter as present in wild-type adenovirus, or an E2-late promoter as used in connection with transgene expression as described herein. the
在第三十一个方面中,问题通过将包括前述核酸之一的载体按照本发明第二十一或第二十二个方面使用而得以解决。 In a thirty-first aspect, the problem is solved by using a vector comprising one of the aforementioned nucleic acids according to the twenty-first or twenty-second aspect of the invention. the
在第三十二个方面中,本发明涉及与YB-1相互作用的的试剂的应用,用于赋予细胞、肿瘤组织的细胞或患者以特征,以便确定是否他们将会被如按照本发明使用的病毒,特别是腺病毒接触和/或处理。 In a thirty-second aspect, the present invention relates to the use of agents that interact with YB-1 for characterizing cells, cells of tumor tissue or patients, in order to determine whether they will be used as in accordance with the present invention exposure to and/or handling of viruses, especially adenoviruses. the
在一个实施方案中,所述试剂选自包括抗体、抗促成素(anticaline)、适体、适酶(aptazymes)和spiegelmers的组。 In one embodiment, the reagent is selected from the group comprising antibodies, anticalines, aptamers, aptazymes and spiegelmers. the
在第三十二个方面中,问题通过根据本发明的病毒癌基因蛋白质或编码它们的核酸在制备如与按照本发明第二十一和第二十二方面的用途相关使用的病毒、特别是腺病毒中的应用而得以解决。 In a thirty-second aspect, the problem is in the preparation of viruses, in particular The application of adenovirus was solved. the
在一个实施方案中,所述病毒包括编码转基因的核酸。 In one embodiment, the virus includes a nucleic acid encoding a transgene. the
在另一个实施方案中,所述病毒包括翻译产物和/或转基因的转录产物。 In another embodiment, the virus includes translation products and/or transcripts of transgenes. the
在一个优选的实施方案中,腺病毒复制系统的核酸和/或辅助病毒的 核酸包括转基因或编码转基因的核酸。 In a preferred embodiment, the nucleic acid of the adenoviral replication system and/or the nucleic acid of the helper virus comprises a transgene or a nucleic acid encoding a transgene. the
在另一个实施方案中,核酸包括转基因或编码转基因的核酸。 In another embodiment, the nucleic acid comprises a transgene or a nucleic acid encoding a transgene. the
在一个备选的实施方案中,转基因选自包括下列的组:前体药物、细胞因子、细胞调亡诱导基因、肿瘤抑制基因、金属蛋白酶抑制剂基因和血管发生抑制剂基因和酪氨酸激酶抑制剂基因。 In an alternative embodiment, the transgene is selected from the group comprising prodrugs, cytokines, apoptosis-inducing genes, tumor suppressor genes, metalloproteinase inhibitor genes and angiogenesis inhibitor genes and tyrosine kinases Inhibitor gene. the
在一个实施方案中,转基因选自包括siRNA、适体、反义分子和核酶的核酸的组,其中所述siRNA、适体、反义分子和/或核酶针对靶分子。 In one embodiment, the transgene is selected from the group of nucleic acids comprising siRNAs, aptamers, antisense molecules and ribozymes, wherein said siRNAs, aptamers, antisense molecules and/or ribozymes are directed against a target molecule. the
在另一个实施方案中,靶分子选自包括下列的组:抗性相关因子、抗细胞调亡因子、癌基因、血管生成因子、DNA合成酶、DNA修复酶、生长因子和它们的受体、转录因子、金属蛋白酶,特别是基质金属蛋白酶和尿激酶类型的纤溶酶原激活剂。在一个实施方案中,抗性相关因子优选地选自包括P-糖蛋白、MRP和GST的组,并且还包括编码它们的核酸。在一个实施方案中,抗细胞调亡因子选自包括BCL2的组,并且还包括编码它们的核酸。在一个实施方案中,癌基因选自包括Ras,特别是突变的Ras、Rb和MYC的组,并且还包括编码它们的核酸。在一个实施方案中,血管生成因子选自包括VEGF和HMG蛋白的组,并且还包括编码它们的核酸。在一个实施方案中,DNA合成酶选自包括端粒酶的组,并且还包括编码它们的核酸。在一个实施方案中,DNA修复酶选自包括Ku-80的组,并且还包括编码它们的核酸。在一个实施方案中,生长因子选自包括PDGF、EGF和M-CSF的组,并且还包括编码它们的核酸。在另一个实施方案中,受体优选的是生长因子的受体,其中优选地,生长因子选自包括PDGF、EGF和M-CSF的组,并且还包括编码它们的核酸。在一个实施方案中,转录因子选自包括YB-1的组,并且还包括编码它们的核酸。在一个实施方案中,金属蛋白酶特别是基质金属蛋白酶。在一个优选的实施方案中,基质金属蛋白酶选自包括MMP-1和MMP-2的组,并且还包括编码它们的核酸。在一个实施方案中,尿激酶类型的纤溶酶原激活剂选自包括uPa-R的组,并且还包括编码它们的核酸。 In another embodiment, the target molecule is selected from the group comprising resistance-associated factors, anti-apoptotic factors, oncogenes, angiogenic factors, DNA synthetases, DNA repair enzymes, growth factors and their receptors, Transcription factors, metalloproteinases, especially matrix metalloproteinases, and plasminogen activators of the urokinase type. In one embodiment, the resistance-associated factor is preferably selected from the group comprising P-glycoprotein, MRP and GST, and also comprises nucleic acids encoding them. In one embodiment, the anti-apoptotic factors are selected from the group comprising BCL2, and also nucleic acids encoding them. In one embodiment, the oncogene is selected from the group comprising Ras, in particular mutated Ras, Rb and MYC, and also nucleic acids encoding them. In one embodiment, angiogenic factors are selected from the group comprising VEGF and HMG proteins, and also nucleic acids encoding them. In one embodiment, the DNA synthetases are selected from the group comprising telomerases, and also nucleic acids encoding them. In one embodiment, the DNA repair enzymes are selected from the group comprising Ku-80, and also nucleic acids encoding them. In one embodiment, the growth factor is selected from the group comprising PDGF, EGF and M-CSF, and also comprises nucleic acids encoding them. In another embodiment, the receptor is preferably a receptor for a growth factor, wherein preferably the growth factor is selected from the group comprising PDGF, EGF and M-CSF, and also includes nucleic acids encoding them. In one embodiment, the transcription factors are selected from the group comprising YB-1, and also nucleic acids encoding them. In one embodiment, the metalloprotease is in particular a matrix metalloprotease. In a preferred embodiment, the matrix metalloprotease is selected from the group comprising MMP-1 and MMP-2, and also comprises nucleic acids encoding them. In one embodiment, plasminogen activators of the urokinase type are selected from the group comprising uPa-R, and also nucleic acids encoding them. the
在另一个实施方案中,所述药物还包括至少一个药用活性化合物。 In another embodiment, the medicament further comprises at least one pharmaceutically active compound. the
在本发明任何一个方面的优选实施方案中,药用活性化合物选自包括下列的组:细胞因子、金属蛋白酶抑制剂、血管生成抑制剂、细胞抑 制剂和细胞周期抑制剂和酪氨酸激酶抑制剂。 In a preferred embodiment of any aspect of the present invention, the pharmaceutically active compound is selected from the group comprising: cytokines, metalloproteinase inhibitors, angiogenesis inhibitors, cytostatic and cell cycle inhibitors and tyrosine kinase inhibitors agent. the
上述公开的根据本发明的腺病毒,特别是与本发明的第一至第八方面有关的所述的那些,在这里也称作I组腺病毒;而具有反式激活的癌基因蛋白(例如,E1A和/或这里和特别是上面提及的要根据本发明使用的那些)的腺病毒在这里也称作II组腺病毒。I组腺病毒和II组腺病毒在本文中还一起称作腺病毒或根据本发明的腺病毒或根据本发明的病毒。 The above-disclosed adenoviruses according to the present invention, especially those described in relation to the first to eighth aspects of the present invention, are also referred to herein as group I adenoviruses; and have transactivated oncogene proteins (such as , E1A and/or here and in particular those mentioned above to be used according to the invention) are also referred to herein as group II adenoviruses. Group I adenoviruses and group II adenoviruses are also collectively referred to herein as adenoviruses or adenoviruses according to the invention or viruses according to the invention. the
本发明是基于一项意外发现,即腺病毒基因的表达序列的反转导致有效的复制和任选地裂解受腺病毒感染的细胞。关于腺病毒基因的时间上的变化的表达,重点放在E1B蛋白和E4蛋白上,他们在这里还单独地或集中地称作第一种蛋白,它们在第二种蛋白之前表达。第二种蛋白选自E1A蛋白。该表达顺序与野生型腺病毒相比是反转的,在野生型腺病毒中,首先表达E1A蛋白,随后才表达E1B蛋白和E4蛋白,以确保激活转录因子,例如转运进受感染的细胞的核中,并影响或控制进一步的复制活性。野生型腺病毒中的腺病毒转录物的动力学记载在例如Glenn G.M.和 Ricciardi R.P.Virus Research 1988,9,73-91中,其报道说,在野生型中,通常在转录物和翻译产物(分别是E4orf6和E1B55k)之前就可以检测到E1A转录物(即E1A12S转录物和E1A13S转录物)。在本文中,如果没有相反的说明,在本文中E1B蛋白通常优选地是E1B-55kD蛋白。在本文中,如果没有相反的说明,E4蛋白通常优选地是E4orf6蛋白。在本文中,如果没有相反的说明,E1A蛋白通常优选地是E1A12S蛋白,或者是在本文中所述的与E1A-修饰的腺病毒有关的E1A蛋白。 The present invention is based on the unexpected discovery that inversion of the expressed sequence of an adenovirus gene results in efficient replication and optionally lysis of adenovirus-infected cells. With regard to the temporally variable expression of the adenoviral genes, the emphasis is on the E1B and E4 proteins, which are also referred to here individually or collectively as the first protein, which are expressed before the second protein. The second protein is selected from E1A proteins. This order of expression is reversed compared to wild-type adenovirus, in which the E1A protein is expressed first, followed by the E1B and E4 proteins, to ensure the activation of transcription factors such as the in the nucleus and influence or control further replicative activity. The dynamics of adenoviral transcripts in wild-type adenoviruses is described, for example, by Glenn G.M. and Ricciardi R.P. Virus Research 1988, 9, 73-91, which reported that, in wild-type, there is usually a difference between transcripts and translation products (respectively E1A transcripts (ie, E1A12S transcripts and E1A13S transcripts) could be detected before E4orf6 and E1B55k). Herein, unless stated to the contrary, the E1B protein is generally preferably the E1B-55kD protein herein. Herein, if there is no indication to the contrary, the E4 protein is generally preferably the E4orf6 protein. Herein, if not stated to the contrary, the E1A protein is generally preferably the E1A12S protein, or the E1A protein described herein in relation to an E1A-modified adenovirus. the
本发明包括,原则上E1A蛋白(更具体地也是E1A12S蛋白)可以是取代的。如果没有相反的说明,这种取代的E1A蛋白和E1A12S蛋白在本文中也分别称作E1A蛋白和E1A12S蛋白,或者认为是由该术语包括。不只是E1A12S蛋白,还可以使用具有肿瘤抑制功能的E1A蛋白,例如Dickopp A,Esche H,Swart G,Seeber S,Kirch HC,Opalka B.CancerGene Ther.2000,Jul;7(7):1043-50中所记载的。如这里所使用的和/或提及的E1A蛋白(特别是E1A12S蛋白)的其它衍生物,通过也是能从Rb/E2F复合物中释放出因子E2F的蛋白。他们特别是如Chellappan S.等,Proc.Natl.Acad.Sci.USA 1992,89,4549-4533所述的猿猴病毒40肿瘤抗原(SV40大T抗原)、乳头状瘤病毒E7蛋白(HPV E7)。
The present invention includes that in principle the E1A protein (and more specifically also the E1A12S protein) may be substituted. If not stated to the contrary, such substituted E1A protein and E1A12S protein are also referred to herein as E1A protein and E1A12S protein, respectively, or are deemed to be encompassed by that term. Not only E1A12S protein, but also E1A protein with tumor suppressor function, such as Dickopp A, Esche H, Swart G, Seeber S, Kirch HC, Opalka B. CancerGene Ther.2000, Jul;7(7):1043-50 recorded in. Other derivatives of the E1A protein (in particular the E1A12S protein), as used and/or referred to herein, are also proteins capable of releasing the factor E2F from the Rb/E2F complex. They are especially
本发明还包括,可以使用E4orf6和E1B55k的衍生物,如这里所使用的,其中所述的术语E4orf6和E1B55k包含这样的衍生物。衍生物记载在例如Shen Y等,J.of Virology 2001,75,4297-4307;Querido E.等,J.ofVirology 2001,75,699-709中。 The present invention also includes that derivatives of E4orf6 and E1B55k may be used, as used herein, wherein the terms E4orf6 and E1B55k include such derivatives. Derivatives are described, for example, in Shen Y et al., J. of Virology 2001, 75, 4297-4307; Querido E. et al., J. of Virology 2001, 75, 699-709. the
本发明包括,E1B蛋白在E1A蛋白之前表达,或E4蛋白在E1A蛋白之前表达,或E1B蛋白和E4蛋白都在E1A蛋白之前表达,每一种都如上所述。 The present invention includes that the E1B protein is expressed before the E1A protein, or the E4 protein is expressed before the E1A protein, or both the E1B protein and the E4 protein are expressed before the E1A protein, each as described above. the
以该方式设计的腺病毒能在感染细胞后以特别高的水平复制,所述的细胞在核中表达YB-1,优选地在独立于细胞周期的核中表达YB-1,或者其包含去调节的YB-1,优选在细胞质中。希望不限于此,本发明的发明人在下面假设,E1B蛋白和/或E4蛋白组成的复合物和这两种蛋白中的单独一种分别能将去调节的YB-1转运进细胞核中,或者能在先于E1A蛋白表达的E1B蛋白和/或E4蛋白的影响下在那里启动腺病毒的复制。一旦 在细胞核中或者以活化的形式存在于那里,如这里所述,更具体地使用E2-晚期启动子,YB-1有效地复制。因此,E1B蛋白和/或E4蛋白的时间上较早表达避免了在伴有E1A蛋白的初始表达的野生型中观察到的级联。在一个优选的实施方案中,E1A蛋白是特别不再反式激活或仅能将E1B蛋白和/或E4蛋白反式激活到非常有限程度的E1A蛋白。优选地,该反式激活既不足以确保有效的复制,也不足以确保在细胞中的复制,所述细胞的核中不含有YB-1。优选的是,反式激活不发生在这样的细胞中,其独立于细胞周期的核中不含有YB-1,或者不具有去调节的YB-1。 Adenoviruses designed in this manner are capable of replicating at exceptionally high levels after infecting cells expressing YB-1 in the nucleus, preferably in the nucleus independent of the cell cycle, or which contain Regulated YB-1, preferably in the cytoplasm. Without wishing to be limited thereto, the inventors of the present invention hypothesize below that either a complex of E1B protein and/or E4 protein and either protein alone can transport deregulated YB-1 into the nucleus, or Replication of the adenovirus can be initiated there under the influence of the E1B protein and/or the E4 protein expressed prior to the E1A protein. Once in the nucleus or present there in an activated form, YB-1 replicates efficiently, as described here, more specifically using the E2-late promoter. Thus, temporally earlier expression of E1B protein and/or E4 protein avoids the cascade observed in wild type with initial expression of E1A protein. In a preferred embodiment, the E1A protein is an E1A protein which in particular no longer transactivates or which is only able to transactivate the E1B protein and/or the E4 protein to a very limited extent. Preferably, the transactivation is neither sufficient to ensure efficient replication nor sufficient to ensure replication in cells whose nuclei do not contain YB-1. Preferably, transactivation does not occur in cells that do not contain YB-1 in the cell cycle independent nucleus, or do not have deregulated YB-1. the
而且,本发明是基于一项意外发现,即腺病毒能以特别有效的方式复制,如果其包含至少一种能编码蛋白的核酸,其中所述的蛋白选自包含E1B蛋白、E4蛋白和E1A蛋白的组,其中的至少一种蛋白在启动子的控制下,所述启动子与在野生型腺病毒中控制各蛋白表达的启动子不同。这样的复制是特别有效的,且通常导致肿瘤裂解,如果该细胞在核中含有YB-1,特别是在独立于细胞周期的核中含有YB-1,或者如果该细胞含有去调节的YB-1,特别是在细胞质中含有去调节的YB-1。已经在上面关于E1B蛋白、E4蛋白和E1A蛋白描述的内容也适用于此。在野生型腺病毒中,E1B蛋白由E1B启动子控制,E4蛋白由E4启动子控制,E1A蛋白由E1A启动子控制。通过选择与在野生型腺病毒中控制前述蛋白表达的启动子不同的启动子,由此改变前述蛋白的表达以及各腺病毒核酸和蛋白之间的调节性的相互作用。通过选择启动子,可以建立时间上不同的表达图谱,希望在下面不受此限制,导致细胞中观察到的复制,其中的机制可能是已经在前面关于腺病毒蛋白E1B、E4和E1A的时间上不同的表达所描述的。通过启动子(与在野生型腺病毒中控制各蛋白的表达的启动子不同)控制所述蛋白的具体设计的实例,可以从下面的权利要求和实施例部分中得到,其中更具体地,提及的病毒XVirPSJL1和XVirPSJL2是其中的代表性的。优选地,E1B蛋白是E1B55kD蛋白,E4蛋白是E4orf6蛋白,且E1A蛋白是E1A12S蛋白。 Furthermore, the present invention is based on the unexpected discovery that an adenovirus can replicate in a particularly efficient manner if it comprises at least one nucleic acid encoding a protein selected from the group consisting of E1B, E4 and E1A proteins The group wherein at least one protein is under the control of a promoter different from the promoter controlling the expression of each protein in wild-type adenovirus. Such replication is particularly efficient, and often results in tumor lysis, if the cell contains YB-1 in the nucleus, especially in a cell cycle-independent nucleus, or if the cell contains deregulated YB-1 1, specifically containing deregulated YB-1 in the cytoplasm. What has been said above with respect to the E1B protein, the E4 protein and the E1A protein also applies here. In wild-type adenovirus, the E1B protein is controlled by the E1B promoter, the E4 protein is controlled by the E4 promoter, and the E1A protein is controlled by the E1A promoter. By selecting a different promoter than that controlling the expression of the aforementioned proteins in wild-type adenoviruses, the expression of the aforementioned proteins and the regulatory interactions between the respective adenoviral nucleic acids and proteins are altered. Through the choice of promoters, temporally distinct expression profiles can be established, hopefully without limitation below, leading to the observed replication in cells, the mechanisms of which may be those already described above for the adenoviral proteins E1B, E4 and E1A temporally Different expressions are described. Examples of specific designs in which the proteins are controlled by promoters (different from those controlling the expression of the individual proteins in wild-type adenoviruses) can be obtained from the claims and Examples section below, where more specifically, The viruses XVirPSJL1 and XVirPSJL2 are representative of them. Preferably, the E1B protein is an E1B55kD protein, the E4 protein is an E4orf6 protein, and the E1A protein is an E1A12S protein. the
优选地控制E1B蛋白和E4蛋白的启动子选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其条件是,当使用腺病毒启动子时,它们与控制E1B蛋白表 达的E1B启动子不同,且与控制E4蛋白表达的E4启动子不同。特别优选的是,使用E1A启动子控制E1B蛋白和/或E4蛋白表达。E1A启动子记载在例如Boulanger P.A.和Blair,G.E.Biochem.J.1991,275,281-299中。另外,还可以使用每一种和任何其它的异源启动子,即与在野生型腺病毒中控制各蛋白表达的启动子不同的启动子。代表性的实例是CMV启动子,其它的启动子对本领域的技术人员而言是显而易见的。 Preferably, the promoters controlling the E1B protein and the E4 protein are selected from the group comprising tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenovirus promoters, provided that , when adenovirus promoters are used, they are different from the E1B promoter, which controls the expression of the E1B protein, and different from the E4 promoter, which controls the expression of the E4 protein. It is particularly preferred that the E1A promoter is used to control the expression of the E1B protein and/or the E4 protein. The E1A promoter is described, for example, in Boulanger P.A. and Blair, G.E. Biochem. J. 1991, 275, 281-299. In addition, each and any other heterologous promoters, ie promoters different from those controlling the expression of the respective proteins in the wild-type adenovirus, may also be used. A representative example is the CMV promoter, and others will be apparent to those skilled in the art. the
用于控制E1A蛋白的启动子还可以选自包含肿瘤特异性的启动子、器官特异性的启动子、组织特异性的启动子、异源启动子和腺病毒启动子的组,其条件是腺病毒启动子与E1A启动子不同。本发明包括,前述蛋白(即E1B蛋白、E4蛋白或E1A蛋白)中的一种或多种是在相同启动子的控制下,尽管如此,优选的是,特别是E1B蛋白和E4蛋白是在相同启动子的控制下。特别优选的是,E1A蛋白的表达由YB-1-控制的启动子或可以通过YB-1调节的启动子控制。这样的启动子在本文中与本发明的其它方面有关地公开。特别优选地,用腺病毒2-晚期启动子控制E1A启动子的表达,因为它首先可以通过YB-1调节,其次还在没有YB-1的情况下仅仅表现出微小的实际上可以忽略的转录,因而能确保非常好地控制由E2-晚期启动子控制的核酸的表达。这显著地提高了生物安全性,特别是当用于医药领域时。 The promoter used to control the E1A protein can also be selected from the group comprising tumor-specific promoters, organ-specific promoters, tissue-specific promoters, heterologous promoters and adenovirus promoters, provided that the adenovirus Viral promoters are different from E1A promoters. The present invention includes that one or more of the aforementioned proteins (i.e. E1B protein, E4 protein or E1A protein) are under the control of the same promoter, however, it is preferred, in particular, that the E1B protein and the E4 protein are under the control of the same promoter. under the control of the promoter. Particularly preferably, the expression of the E1A protein is controlled by a YB-1-controlled promoter or a promoter which can be regulated by YB-1. Such promoters are disclosed herein in relation to other aspects of the invention. It is particularly preferred to use the adenoviral 2-late promoter to control the expression of the E1A promoter, since firstly it can be regulated by YB-1 and secondly also exhibits only slight, practically negligible transcription in the absence of YB-1 , thus ensuring very good control of the expression of nucleic acids controlled by the E2-late promoter. This significantly increases biosafety, especially when used in the field of medicine. the
而且,本发明的发明人已经发现,腺病毒在细胞中能特别好地复制,所述的细胞在核中含有YB-1,更具体地在独立于细胞周期的核中含有YB-1,和/或含有去调节的YB-1,优选地在细胞质中含有去调节的YB-1,如果直接地或间接地特别是在细胞核中为复制提供YB-1,或者如果YB-1的提供是直接地或间接地通过腺病毒蛋白介导,其中所述的腺病毒蛋白与E1A不同。本发明的该方面与本文中已经公开的方面不同,即反式激活E1A-修饰的腺病毒优选II组腺病毒的应用能使这些病毒在YB-1核-阳性的肿瘤细胞中复制,特别是YB-1阳性的独立于细胞周期的YB-1核-阳性的细胞,以及含有去调节的YB-1、特别是在细胞质中含有YB-1的那些细胞,在这里没有利用E1A蛋白(特别是E1A13S蛋白)的反式激活特征,即关于I组腺病毒,而是在一个优选的实施方案中,E1A13S蛋白是功能上失活的,因而不再能反式激活E4orf6和E1B55k,它们分别在核中 直接地或间接地参与YB-1的转运和提供。结果,根据本发明的该方面,不能有效地复制腺病毒。在该范围内,现在核中的YB-1的提供和为腺病毒复制进行的YB-1的提供不再受E1A蛋白的直接或间接参与的控制,而是通过不受E1A控制的E1B蛋白(特别是E1B55kD蛋白)和/或E4蛋白(特别是E4orf6蛋白)的表达来实现。 Furthermore, the inventors of the present invention have found that adenoviruses replicate particularly well in cells containing YB-1 in the nucleus, more specifically in the nucleus independent of the cell cycle, and / or contain deregulated YB-1, preferably in the cytoplasm, if YB-1 is provided for replication directly or indirectly, especially in the nucleus, or if the provision of YB-1 is direct mediated directly or indirectly by an adenoviral protein that differs from E1A. This aspect of the invention differs from that already disclosed herein in that the use of transactivating E1A-modified adenoviruses, preferably group II adenoviruses, enables the replication of these viruses in YB-1 nuclear-positive tumor cells, in particular YB-1-positive, cell-cycle-independent YB-1 nuclear-positive cells, as well as those cells containing deregulated YB-1, especially YB-1 in the cytoplasm, do not utilize E1A proteins here (especially E1A13S protein), i.e. with respect to group I adenoviruses, but in a preferred embodiment, the E1A13S protein is functionally inactive, so that it can no longer transactivate E4orf6 and E1B55k, respectively, in the nuclear Directly or indirectly involved in the transport and provision of YB-1. As a result, according to this aspect of the invention, adenovirus cannot replicate efficiently. In this context, provision of YB-1 in the nucleus and for adenovirus replication is now no longer controlled by direct or indirect involvement of the E1A protein, but by the E1B protein ( Especially the expression of E1B55kD protein) and/or E4 protein (especially E4orf6 protein). the
腺病毒的该实施方案还可以通过上述措施中的一种来实现,例如通过与E1A蛋白的表达相比,提前E1B蛋白和/或E4蛋白的时间上表达,或者通过将E1B蛋白、E4蛋白和E1A蛋白中的一种或多种置于与在野生型腺病毒中控制各蛋白的表达的启动子不同的启动子的控制下。 This embodiment of the adenovirus can also be achieved by one of the above-mentioned measures, for example by expressing the E1B protein and/or the E4 protein earlier than the expression of the E1A protein, or by combining the E1B protein, the E4 protein and the One or more of the E1A proteins are placed under the control of a different promoter than that controlling the expression of the individual proteins in the wild-type adenovirus. the
最后,本发明的发明人从意外的发现开始,即有效的腺病毒复制还可以发生特别是在核中含有YB-1的细胞中,更具体地在独立于细胞周期的核中含有YB-1的细胞中,或者在含有去调节的YB-1、优选在细胞质中含有去调节的YB-1的细胞中,如果E1B蛋白、E4蛋白和E1A蛋白中的至少一个、特别是它们的优选形式是在启动子控制下的表达盒中表达。在本发明的一个实施方案中,基本地提供了3种表达盒,每一个都含有单独一种所述蛋白。在一个备选实施方案中,表达盒还可以分别含有两种或多种蛋白E1B、E4和E1A和它们的衍生物以及可能的替代物,特别是在E1A12S的情况下。以前所述的关于腺病毒包含与蛋白E1B、E4和E1A有关的核酸的内容,也适用于设计各种蛋白和各自使用的启动子。当使用这样的表达盒时,优选的是,完全地或部分地删除了野生型腺病毒的基因组中的蛋白及编码它们的核酸,所述蛋白对应于表达盒的各蛋白,以确保病毒是稳定的,并防止重组,至少是在较大的程度上。 Finally, the inventors of the present invention started from the unexpected discovery that efficient adenovirus replication can also occur especially in cells containing YB-1 in the nucleus, and more specifically in cells that contain YB-1 in the nucleus independent of the cell cycle or in cells containing deregulated YB-1, preferably in the cytoplasm, if at least one of the E1B protein, the E4 protein and the E1A protein, particularly their preferred form, is Expression is in an expression cassette under the control of a promoter. In one embodiment of the invention, essentially 3 expression cassettes are provided, each containing a single said protein. In an alternative embodiment, the expression cassette may also contain respectively two or more proteins E1B, E4 and E1A and their derivatives and possible substitutes, especially in the case of E1A12S. What has been said previously regarding the adenovirus containing nucleic acids associated with the proteins E1B, E4 and E1A also applies to the design of the individual proteins and the respective promoters used. When using such an expression cassette, it is preferred that the proteins corresponding to the individual proteins of the expression cassette are completely or partially deleted from the genome of the wild-type adenovirus, to ensure that the virus is stable. , and prevent recombination, at least to a large extent. the
原则上,可以将表达盒分别克隆进腺病毒的每个区域和每个位点,其中优选地将一个或几个表达盒分别地或彼此组合地插入到病毒的E1区、E3区和/或E4区。E1、E3和E4区的核酸可能被完全的、部分地删除,或者根本未被删除,然而根据本发明关于腺病毒优选的是,编码E1A13S基因的核酸是失活的或缺失的,所以该病毒不能提供任何反式激活E1A蛋白。一个或多个区域E1、E3和E4的这种缺失程度取决于使用的表达盒和任选地进一步导入的外源基因或转基因或含有它们的其它表达盒,即与腺病毒基因不同的基因,至少在一定程度上不同,即它们不是由在野生 型腺病毒中占优势的腺病毒核酸的调节内容提供,也不是由在该位点的野生型腺病毒的腺病毒核酸序列提供。本发明包括,在腺病毒基因组中部分地或完全地删除了在一个或多个编码E1B蛋白、E4蛋白和/或E1A蛋白的表达盒中含有的核酸。在一个实施方案中,例如在根据本发明的腺病毒XvirPSJL1或2中,部分地删除了编码E4orf6的腺病毒核酸,但是表达盒中含有能编码它的完整核酸。优选地,这也可以在E1B55k(也称作E155Kd)蛋白和/或E1A12S蛋白实现。缺失的程度将在优选的实施方案中选择,以使最大包装大小达到野生型腺病毒的最大包装大小的约103%,尽管该界限只是一个优选的界限。在腺病毒基因组中制作的可能的缺失在优选的实施方案中只进行限制,以确保还可以生产出感染性的和包装的颗粒。在本文公开的内容和标准实验的基础上,本领域的技术人员能够确定缺失的精确程度。 In principle, the expression cassettes can be cloned separately into each region and each site of the adenovirus, wherein preferably one or several expression cassettes are inserted individually or in combination with each other into the E1 region, E3 region and/or E4 area. The nucleic acids in the E1, E3 and E4 regions may be completely, partially deleted, or not deleted at all, however it is preferred for adenoviruses according to the present invention that the nucleic acid encoding the E1A13S gene is inactivated or deleted, so that the virus Does not provide any transactivation of the E1A protein. The extent of this deletion of one or more regions E1, E3 and E4 depends on the expression cassette used and optionally further introduced foreign genes or transgenes or other expression cassettes containing them, i.e. genes different from the adenoviral genes, They differ at least to the extent that they are not provided by the regulatory content of the adenoviral nucleic acid that predominates in the wild-type adenovirus, nor by the adenoviral nucleic acid sequence of the wild-type adenovirus at that site. The present invention includes partial or complete deletion of nucleic acids contained in one or more expression cassettes encoding E1B protein, E4 protein and/or E1A protein in the adenovirus genome. In one embodiment, for example in the adenovirus XvirPSJL1 or 2 according to the invention, the adenoviral nucleic acid encoding E4orf6 is partially deleted, but the expression cassette contains the complete nucleic acid encoding it. Preferably, this is also achieved in the E1B55k (also called E155Kd) protein and/or the E1A12S protein. The extent of the deletion will in preferred embodiments be selected so that the maximum packaging size reaches about 103% of that of wild-type adenovirus, although this limit is only a preferred limit. Possible deletions made in the adenoviral genome are only limited in a preferred embodiment to ensure that infectious and packaging particles can also be produced. One skilled in the art will be able to determine the precise extent of the deletion based on the disclosure herein and standard experimentation. the
作为构建本文所述的腺病毒的起点,可以使用任何野生型腺病毒,但是也可以使用其它的腺病毒,只要它们是根据本发明的技术教导构建的。特别优选地使用C亚群腺病毒,在该群内又优选使用腺病毒2和腺病毒5。
As a starting point for the construction of the adenoviruses described herein, any wild-type adenovirus can be used, but other adenoviruses can also be used, as long as they are constructed according to the technical teachings of the present invention. Particular preference is given to using subgroup C adenoviruses, within which
如果没有相反的说明,术语E1B蛋白、E4蛋白和E1A蛋白的单复数形式在本文中以同义的方式使用。 If not stated to the contrary, the singular and plural forms of the terms E1B protein, E4 protein and E1A protein are used synonymously herein. the
如这里所使用的术语“去调节的”YB-1是指如这里所使用的YB-1分子或YB-1蛋白,其存在形式与在细胞中、优选地在非肿瘤细胞中通常存在的YB-1定量地和/或定性地不同。可以通过特殊病毒将去调节的YB-1表征和鉴别为:能在含有这样的去调节的YB-1的细胞背景中,在存在去调节的YB-1的情况下进行复制。与其相关的特殊病毒是这样的,其中的E1A蛋白是突变的且表现出反式激活功能。这些特殊病毒的实例是:ADδ24,dl 922-947,E1 Ad/01/07和CB 016和/或[Howe,J.A等,MolecularTherapy 2,485-495,2000;Fueyo J.等,Oncogene 19,2-12,2000;Heise C.等,Nature Medicine 6,1134-1139,2001;Balague,C等,J.Virol.75,7602-7611,2001;Bautista,D.S.等,Virology 1991,182,578-596;Jelsma T.N.等,Virology1988,163,494-502;Wong,H.K.和Ziff E.B.,J.of Virology 1994,68,4910-4920]所述的那些。这样的细胞和具有这样背景的细胞可以分别用于I组腺病毒和/或II组腺病毒的复制。另外,根据本发明的腺病毒可以裂解 含有这种细胞的肿瘤。
The term "de-regulated" YB-1 as used herein refers to a YB-1 molecule or YB-1 protein as used herein in a form similar to the YB normally present in cells, preferably in non-neoplastic cells -1 Quantitatively and/or qualitatively different. Deregulated YB-1 can be characterized and identified by specific viruses as being able to replicate in the presence of deregulated YB-1 in the context of cells containing such deregulated YB-1. A particular virus related to it is one in which the E1A protein is mutated and exhibits a transactivation function. Examples of these special viruses are: ADδ24, dl 922-947, E1 Ad/01/07 and CB 016 and/or [Howe, J.A et al.,
而且,本发明是基于意外的发现,即E1A-修饰的腺病毒在YB-1核阳性的肿瘤细胞中的DNA复制是基于E2-晚期启动子的激活。E1A-修饰的腺病毒应当理解为是这样的,其(a)在YB-1核-阴性的细胞中的复制与野生型相比有所减少,或根本不复制,(b)对至少一种病毒基因具有反式激活活性,其中该基因特别选自包含E1B-55kDa、E4orf6、E4orf3和E3ADP的组,和/或(c)不能通过腺病毒将细胞的YB-1转移至核内。任选地,根据本发明使用的腺病毒具有其它特征,即腺病毒编码的E1A蛋白的结合会干扰E2F与Rb的结合,并且能够分解由E2F和Rb组成的各自复合物。具有一个或数个前述的特征a)至c)、优选全部特征a)至c)的腺病毒在核内不含有YB-1的细胞中是复制缺陷的。 Furthermore, the present invention is based on the unexpected discovery that DNA replication of E1A-modified adenoviruses in YB-1 nuclear positive tumor cells is based on activation of the E2-late promoter. An E1A-modified adenovirus is understood to be one that (a) replicates in YB-1 nuclear-negative cells with reduced or no replication at all, (b) for at least one The viral gene has transactivation activity, wherein the gene is specifically selected from the group comprising E1B-55kDa, E4orf6, E4orf3 and E3ADP, and/or (c) cannot transfer the cellular YB-1 into the nucleus by the adenovirus. Optionally, the adenovirus used according to the invention has the additional characteristic that the binding of the E1A protein encoded by the adenovirus interferes with the binding of E2F to Rb and is able to dissociate the respective complexes composed of E2F and Rb. Adenoviruses having one or several of the aforementioned features a) to c), preferably all of the features a) to c), are replication deficient in cells that do not contain YB-1 in the nucleus. the
在一个实施方案中,本文所用的显著减少的复制具体地是指与野生型相比,复制降低了2倍、优选5倍、更优选10倍和最优选100倍。在优选的实施方案中,使用相同或相似的细胞系,相同或相似的感染的病毒滴度(感染复数,MOI,或噬菌斑形成单位,pfu)和/或相同或相似的常规实验条件来比较复制。本文所用的复制特别是指颗粒的形成。在另一实施方案中,复制的测量可以是病毒核酸合成的程度。测定病毒核酸合成的程度的方法以及测定颗粒形成的方法为本领域技术人员所已知。 In one embodiment, significantly reduced replication as used herein specifically refers to a 2-fold, preferably 5-fold, more preferably 10-fold and most preferably 100-fold reduction in replication compared to wild type. In a preferred embodiment, the same or similar cell line, the same or similar infected virus titer (multiplicity of infection, MOI, or plaque forming unit, pfu) and/or the same or similar routine experimental conditions are used to Compare copy. Replication as used herein refers in particular to the formation of particles. In another embodiment, the measure of replication may be the extent of viral nucleic acid synthesis. Methods of determining the extent of viral nucleic acid synthesis as well as methods of measuring particle formation are known to those skilled in the art. the
本文所述的发现、方法、应用或核酸、蛋白、复制系统等不一定限于腺病毒。原则上,这些系统还存在于其它病毒中,它们也包含在本文中。 The discoveries, methods, applications or nucleic acids, proteins, replication systems, etc. described herein are not necessarily limited to adenoviruses. In principle, these systems are also present in other viruses, which are also included here. the
使用根据本发明的病毒或使用根据本发明所述的病毒的应用,与按照现有技术10-100pfu/细胞相比,当使用1-10pfu/细胞的感染率时,可以实现比得上野生型的复制。 With the virus according to the invention or with the application of the virus according to the invention a comparable wild type can be achieved when using an infection rate of 1-10 pfu/cell compared to 10-100 pfu/cell according to the prior art copy. the
细胞的YB-1应当是指由细胞编码和优选还由细胞表达的任何YB-1,其中该YB-1存在细胞中,特别是在各细胞感染腺病毒之前,所述的腺病毒优选本文所述的腺病毒和/或辅助病毒。然而,本发明也包括,细胞的YB-1是引入细胞的或通过仅当施加外部措施(例如用病毒、优选腺病毒感染)由这些细胞生产的YB-1。 YB-1 of a cell shall mean any YB-1 encoded by and preferably also expressed by a cell, wherein the YB-1 is present in the cell, in particular prior to infection of each cell with an adenovirus, preferably as described herein adenovirus and/or helper virus as described above. However, the invention also includes that the YB-1 of the cells is YB-1 introduced into the cells or produced by these cells only when external measures are applied (eg infection with a virus, preferably adenovirus). the
以下不希望受此束缚,本发明的发明人假定E2-早期启动子(即早期E2启动子)不是通过人细胞E2F转录因子打开,所述E2F转录因子与根 据本发明使用的病毒的复制相关,还与本发明的腺病毒的根据本发明的应用相关。在这样的环境下,复制的开始独立于细胞的Rb状态,即使用本文公开的病毒感染的和优选随后裂解的肿瘤细胞可以包含功能性的以及无活性的Rb蛋白。另外,使用本文公开的腺病毒或使用本文公开的条件的腺病毒的复制不需要任何功能性的p53蛋白,但是也不受其存在的负面影响。如此,该技术教导背离了使用能消解肿瘤或能裂解肿瘤的腺病毒的原理,所述腺病毒的类型为AdΔ24、dl922-947、E1Ad/01/07、CB016,或例如在欧洲专利EP 0 931 830中描述的那些腺病毒,已经在以下假设下在E1A蛋白中引入了一个或数个缺失:完好的功能性的Rb蛋白会阻碍体内有效复制,因此仅在Rb-阴性和Rb-突变细胞中体内地提供了腺病毒的复制。现有技术的这些腺病毒系统是基于E1A,以便通过早期E2启动子(E2早期启动子)和“自由E2F”控制腺病毒的体内复制。然而,根据本发明可以将现有技术中的这些已知病毒用于细胞中的复制,所述细胞在独立于细胞周期的核内含有YB-1,或者含有去调节的YB-1。 Without wishing to be bound thereby, the inventors of the present invention postulate that the E2-early promoter (i.e. the early E2 promoter) is not turned on by the human cell E2F transcription factor which is associated with the replication of the virus used according to the invention , is also relevant for the use according to the invention of the adenoviruses of the invention. In such circumstances, initiation of replication is independent of the Rb status of the cells, ie, tumor cells infected with the viruses disclosed herein and preferably subsequently lysed may contain functional as well as inactive Rb proteins. Additionally, replication of adenoviruses using the adenoviruses disclosed herein or using the conditions disclosed herein does not require any functional p53 protein, but is not negatively affected by its presence. Thus, this technical teaching departs from the principle of using adenoviruses of the type AdΔ24, dl922-947, E1Ad/01/07, CB016, or e.g. Those adenoviruses described in 830, have introduced one or several deletions in the E1A protein under the assumption that an intact and functional Rb protein would prevent efficient replication in vivo, and thus only in Rb-negative and Rb-mutant cells Adenovirus replication is provided in vivo. These prior art adenoviral systems are based on E1A in order to control the in vivo replication of the adenovirus by the early E2 promoter (E2 early promoter) and "free E2F". However, these viruses known from the prior art can be used according to the invention for replication in cells containing YB-1 in the nucleus independent of the cell cycle, or deregulated YB-1. the
根据本发明可以使用在所述欧洲专利EP 0 931 830中描述的病毒,特别是腺病毒。更具体地,在所述专利中描述的病毒是复制缺陷的,且不能表达病毒癌蛋白的病毒,该癌蛋白能够结合功能性的Rb肿瘤抑制基因产物。腺病毒可以具体地为不能表达病毒E1A癌蛋白的任何腺病毒,该E1A癌蛋白能够结合功能性的肿瘤抑制剂基因产物,更具体地是Rb。病毒E1A癌蛋白可以表现出失活突变,例如在腺病毒Ad5(在本文中也称作Ad5)的氨基酸位点30-85的CR1结构域,在核苷酸位点697-790和/或Ad5的氨基酸位点120-130CR2结构域,核苷酸位点920-967,其涉及p105 Rb蛋白、p130和p107蛋白的结合。但是,本发明还包括,腺病毒是类型2的dl 312或类型5的NT dl 1010。
The viruses described in said European patent EP 0 931 830, in particular adenoviruses, can be used according to the invention. More specifically, the viruses described in said patent are replication deficient and incapable of expressing a viral oncoprotein capable of binding a functional Rb tumor suppressor gene product. The adenovirus may specifically be any adenovirus incapable of expressing a viral E1A oncoprotein capable of binding a functional tumor suppressor gene product, more specifically Rb. The viral E1A oncoprotein may exhibit inactivating mutations, for example in the CR1 domain at amino acid positions 30-85 of adenovirus Ad5 (also referred to herein as Ad5), at nucleotide positions 697-790 and/or Ad5 The amino acid positions 120-130 of the CR2 domain, and the nucleotide positions 920-967, are involved in the binding of the p105 Rb protein, p130 and p107 proteins. However, the invention also includes that the adenovirus is
关于根据本发明的腺病毒制备药物,特别是制备治疗肿瘤病和本文公开的其它疾病的药物的应用,关于本发明的腺病毒的应用和本发明的腺病毒在细胞中复制的应用,所述的细胞在核内含有YB-1,优选地在独立于细胞周期的核内含有YB-1,或者含有去调节的YB-1,优选地在细胞质中,复制最终发生在这样的细胞中,其在核内含有YB-1,优选地独立于细胞周期,换句话说,它们是YB-1核-阳性的,或者发生在含有去调节的YB-1 的细胞中。特别值得注意的是,如此的腺病毒在下述的细胞中不复制或以显著降低的水平复制:其核内不含有YB-1而仅在细胞质中含有YB-1,或者不含有任何去调节的YB-1。因此,这些病毒的成功复制需要在核内存在YB-1,优选地独立于细胞周期,或者存在去调节的YB-1。如将在下面更详细地描述的,这可以通过例如对细胞施加措施来实现,该措施能导致YB-1的表达或存在,优选地独立于细胞周期,或核中的去调节的YB-1,或去调节的YB-1的表达。各种措施可以例如分别是通过根据本发明使用或经历本发明的腺病毒YB-1的编码和表达,该腺病毒除了腺病毒基因以外还携带编码YB-1和特别是编码YB-1表达的遗传信息。导致细胞核内YB-1转运、诱导或表达的其它措施是采用应激,如向细胞和包含该细胞的生物体施加细胞生长抑制剂、照射、过热等。在一个优选实施方案中,辐照可以是任何辐射,其是例如在治疗肿瘤病中所使用的。 Regarding the preparation of medicines according to the adenovirus of the present invention, especially the preparation of medicines for the treatment of tumor diseases and other diseases disclosed herein, the application of the adenovirus of the present invention and the application of the adenovirus of the present invention to replicate in cells, the The cells contain YB-1 in the nucleus, preferably in the nucleus independent of the cell cycle, or contain deregulated YB-1, preferably in the cytoplasm, and replication ultimately occurs in such cells that Contain YB-1 in the nucleus, preferably cell cycle independent, in other words, they are YB-1 nuclear-positive, or occur in cells containing deregulated YB-1. It is particularly noteworthy that adenoviruses do not replicate or replicate at significantly reduced levels in cells that do not contain YB-1 in the nucleus but only in the cytoplasm, or that do not contain any deregulated YB-1. Successful replication of these viruses therefore requires the presence of YB-1 in the nucleus, preferably cell cycle independent, or the presence of deregulated YB-1. As will be described in more detail below, this can be achieved, for example, by applying to the cell a measure that results in the expression or presence of YB-1, preferably independent of the cell cycle, or deregulated YB-1 in the nucleus , or to deregulate the expression of YB-1. Various measures can be made, for example, by using according to the invention or undergoing the coding and expression of the adenovirus YB-1 according to the invention, which, in addition to the adenovirus gene, also carries a gene coding for YB-1 and in particular coding for the expression of YB-1. Genetic information. Other means of causing translocation, induction or expression of YB-1 in the nucleus are the use of stress, such as application of cytostatics, irradiation, overheating, etc. to the cell and organism containing the cell. In a preferred embodiment, the radiation may be any radiation, which is used, for example, in the treatment of neoplastic diseases. the
在优选的实施方案中表征了根据本发明使用的、特别是用于肿瘤裂解的腺病毒以及依照本发明的腺病毒,其特征在于,它们在下述细胞中不复制:其独立于细胞周期的核内不含有YB-1且因而是YB-1核-阴性的,或者不含有任何去调节的YB-1。 In a preferred embodiment, the adenoviruses used according to the invention, in particular for tumor lysis, and the adenoviruses according to the invention are characterized in that they do not replicate in cells that are independent of the nuclear either do not contain YB-1 and are thus YB-1 nuclear-negative, or do not contain any deregulated YB-1. the
一部分要根据本发明使用的腺病毒(它们与本发明的腺病毒不同)的另一特征是它们编码在此也称为癌基因蛋白的病毒癌基因,其中癌基因蛋白优选为E1A,其中癌基因蛋白能够激活至少一个对病毒复制和/或受病毒感染细胞的细胞裂解有影响的病毒基因。优选地,对复制的影响是这样的,与其中各种病毒的癌基因蛋白缺失的情形相比,病毒在癌基因蛋白存在下复制得更好。该过程在本文中也称为反式激活,当反式激活是通过E1A介导时,具体地称作E1A反式激活。术语“反式激活”优选地描述以下过程,即各种病毒癌蛋白对一个或多个不同于编码病毒癌蛋白基因本身基因的其它基因的表达和/或转录有影响,即控制其表达和/或翻译,特别是激活们。这些病毒基因优选地为E1B55kDa、E4orf6、E4orf3和E3ADP,以及前述基因和基因产物各自的任何组合。 A further feature of some of the adenoviruses to be used according to the invention (which differ from the adenoviruses of the invention) is that they encode a viral oncogene, also referred to herein as an oncogene protein, wherein the oncogene protein is preferably E1A, wherein the oncogene The protein is capable of activating at least one viral gene that has an effect on viral replication and/or cell lysis of virus-infected cells. Preferably, the effect on replication is such that the virus replicates better in the presence of the oncogene protein than in a situation where the respective virus' oncogene protein is absent. This process is also referred to herein as transactivation, specifically E1A transactivation when the transactivation is mediated by E1A. The term "transactivation" preferably describes the process by which various viral oncoproteins have an effect on the expression and/or transcription of one or more genes other than the genes encoding the viral oncoprotein genes themselves, i.e. control their expression and/or or translations, especially activations. These viral genes are preferably E1B55kDa, E4orf6, E4orf3 and E3ADP, and any combination of each of the foregoing genes and gene products. the
根据本发明使用的腺病毒和本发明的腺病毒的另一个尽管只是任选的特征分别是它们对肿瘤抑制剂Rb的结合特征,以及它们编码的蛋白中的具体一些的对肿瘤抑制剂Rb的结合特征。原则上,本发明包括,根据 本发明使用的腺病毒能或不能与Rb结合。两种腺病毒备选实施方案的任一种的应用独立于处理的或要处理细胞的Rb状态。 Another, albeit optional, feature of the adenoviruses used according to the invention and of the adenoviruses of the invention are their binding characteristics to the tumor suppressor Rb, and the binding properties of specific ones of the proteins they encode to the tumor suppressor Rb, respectively. Combine features. In principle, the invention includes that the adenovirus used according to the invention is capable or incapable of binding Rb. The use of either of the two adenovirus alternative embodiments is independent of the Rb status of the treated or treated cells. the
为了赋予E1A不结合Rb的能力,可以对E1A癌蛋白进行下列删除:CR1区域(Ad5中氨基酸位点30-85)的缺失和CR2区域(AD5中氨基酸位点120-139)的缺失。在进行过程中,CR3区域被保留,且可对其它早期病毒基因具有反式激活功能。 To confer on E1A the ability not to bind Rb, the following deletions can be made to the E1A oncoprotein: deletion of the CR1 region (amino acid positions 30-85 in Ad5) and deletion of the CR2 region (amino acid positions 120-139 in AD5). During the process, the CR3 region is preserved and may have transactivation functions for other early viral genes. the
但是,为了赋予E1A结合Rb的能力,下列对E1A癌蛋白的缺失原则上是可能的:CR3区域(氨基酸位点140-185)的缺失;N-末端(氨基酸位点1-29)的缺失;氨基酸位点85-1 19的缺失;和C-末端(氨基酸位点186-289)的缺失。上述列出的区域不影响E2F与Rb的结合。反式激活功能保持完整,但是与野生型Ad5相比有所降低。 However, in order to confer the ability of E1A to bind Rb, the following deletions to the E1A oncoprotein are in principle possible: deletion of the CR3 region (amino acid positions 140-185); deletion of the N-terminus (amino acid positions 1-29); Deletion of amino acid positions 85-119; and deletion of the C-terminus (amino acid positions 186-289). The regions listed above do not affect the binding of E2F to Rb. Transactivation function remains intact but is reduced compared to wild-type Ad5. the
本发明还包括,特别是关于本发明的腺病毒,将E1A蛋白、特别是E1A12S蛋白设计成这样,在一个实施方案中,它能结合到Rb,在不同的实施方案中,它不能结合到Rb,其中这样的E1A12S蛋白是E1A蛋白,更具体地是本发明意义上的E1A12S蛋白,然而其在现有技术中有时称作修饰的E1A12S。E1A12S蛋白的各种设计,更具体地关于E1A蛋白(它在本文中也简称为E1A)的前述缺失,均为本领域技术人员所知。 The invention also includes, in particular with respect to the adenoviruses of the invention, that the E1A protein, especially the E1A12S protein, is designed such that in one embodiment it binds to Rb and in a different embodiment it cannot bind to Rb , wherein such an E1A12S protein is an E1A protein, more specifically an E1A12S protein in the sense of the present invention, which however is sometimes referred to as a modified E1A12S in the prior art. Various designs of the E1A12S protein, more specifically with regard to the aforementioned deletion of the E1A protein (which is also referred to herein simply as E1A), are known to those skilled in the art. the
在现有技术中基本已知的且没有显示出任何反式激活的这些腺病毒通常认为是复制缺陷型。然而,本发明的发明人的贡献在于,已经发现它们仍然能够在适当背景下特别是细胞背景下复制。YB-1在核内的存在,优选YB-1在核内的独立于细胞周期的存在,或去调节的YB-1,能产生或提供该适当的细胞背景。在本发明的一个和任何其它方面所用的术语细胞或细胞系统包含细胞提取物的片段或级分,以及体外、体内或原位的细胞。在这个程度上,术语细胞系统或细胞还包含分别存在于细胞培养物、组织培养物、器官培养物或任何体内和原位组织或器官中的细胞,其为分离的、成群的或作为组织、器官或生物体的一部分,但是也照此在优选的活体中存在。生物体优选地为任何脊椎生物,更优选哺乳动物。更优选地,生物体是人生物体。其它优选的生物体是根据本发明的各个方面公开的那些。 These adenoviruses, which are basically known in the prior art and do not show any transactivation, are generally considered to be replication deficient. However, it is a contribution of the inventors of the present invention that they have been found to still be able to replicate in an appropriate context, especially a cellular context. The presence of YB-1 in the nucleus, preferably a cell cycle-independent presence of YB-1 in the nucleus, or deregulated YB-1, can create or provide this appropriate cellular context. The term cell or cell system as used in one and any other aspect of the invention encompasses fragments or fractions of cell extracts, as well as cells in vitro, in vivo or in situ. To this extent, the term cellular system or cell also includes cells present in cell culture, tissue culture, organ culture or any in vivo and in situ tissue or organ, respectively, isolated, in clusters or as tissue , an organ or a part of an organism, but as such also exists preferably in a living body. The organism is preferably any vertebrate, more preferably a mammal. More preferably, the organism is a human organism. Other preferred organisms are those disclosed according to the various aspects of the present invention. the
另外,还本发明包括,基于本文提供的技术教导,在细胞中产生了新 病毒,该病毒能表现出本文所述的腺病毒以及现有技术中所述的那些的复制行为,所述的细胞是YB-1核-阳性的,优选独立于细胞周期的YB-1核-阳性的,或包含去调节的YB-1。换句话说,优选特别从已知的腺病毒开始,可以设计其它病毒,其具有根据本发明应用有关的本文定义的特征。 In addition, the present invention includes, based on the technical teachings provided herein, the production of novel viruses in cells which exhibit the replication behavior of the adenoviruses described herein as well as those described in the prior art, said cells Is YB-1 nuclear-positive, preferably cell cycle-independent YB-1 nuclear-positive, or comprises deregulated YB-1. In other words, preferably starting especially from known adenoviruses, other viruses can be designed which have the characteristics defined herein which are relevant for use according to the invention. the
与本发明相关,与本发明的病毒相反,要根据本发明使用的各种腺病毒的修饰的E1A癌蛋白能够在YB-1核-阳性的细胞中或包含去调节的YB-1的细胞中反式激活早期病毒基因,例如E1B55K,E4orf3,E4orf6,E3ADP。优选地,对病毒基因组无其它改变,各种腺病毒在此程度上可以另外对应于野生型的腺病毒或其衍生物。 In connection with the present invention, in contrast to the viruses of the present invention, the modified E1A oncoproteins of the various adenoviruses to be used according to the present invention are capable of expressing in YB-1 nuclear-positive cells or in cells comprising deregulated YB-1 Transactivates early viral genes such as E1B55K, E4orf3, E4orf6, E3ADP. Preferably, there are no other changes to the viral genome, to the extent that each adenovirus may otherwise correspond to a wild-type adenovirus or a derivative thereof. the
在本文中公开的编码或包含反式激活本发明意义上的癌基因蛋白的病毒,包含例如腺病毒AdΔ24,dl922-947,E1Ad/01/07,CB106和/或在欧洲专利EP 0 931 830中所述的腺病毒,其各自能够反式激活早期基因,如E1B,E2,E3和/或E4,并且比得上野生型腺病毒,特别是野生型Ad5。在这些情况下,E1A蛋白的特定区域负责反式激活。在各种腺病毒的血清型中,在E1A蛋白中存在3个高度保守的区域。氨基酸位点41-80的CR1区域,氨基酸位点120-139的CR2区域和氨基酸位点140-188的CR3区域。反式激活功能主要基于E1A蛋白中CR3区域的存在。CR3的氨基酸序列在前述腺病毒中以未改变的方式存在。这导致早期基因E1B,E2,E3和E4的反式激活,其独立于是否YB-1存在于核或细胞质中。 The viruses disclosed herein encoding or comprising transactivating oncogene proteins in the sense of the present invention comprise for example adenoviruses AdΔ24, dl922-947, E1Ad/01/07, CB106 and/or in European patent EP 0 931 830 Said adenoviruses are each capable of transactivating early genes, such as E1B, E2, E3 and/or E4, and are comparable to wild-type adenoviruses, especially wild-type Ad5. In these cases, a specific region of the E1A protein is responsible for transactivation. Among various adenovirus serotypes, there are three highly conserved regions in the E1A protein. The CR1 region at amino acid positions 41-80, the CR2 region at amino acid positions 120-139 and the CR3 region at amino acid positions 140-188. The transactivation function is mainly based on the presence of the CR3 domain in the E1A protein. The amino acid sequence of CR3 exists unchanged in the aforementioned adenoviruses. This results in transactivation of the early genes E1B, E2, E3 and E4 independent of whether YB-1 is present in the nucleus or cytoplasm. the
与此相反,在重组腺病毒dl520中,CR3区域已经缺失。因此,dl520表达所谓的E1A12S蛋白,其不包含CR3区域的氨基酸序列。结果,dl520仅可以发挥极弱的反式激活功能,特别是在E2区域,因此在YB-1核-阴性的细胞中不复制。在YB-1核-阳性的细胞中,YB-1反式激活E2区域,并因此允许dl520的有效复制。为了本文所述目的的象dl520的系统和源自它们的系统的应用以此为基础。两种前述腺病毒组(例如δ24(本文也称为AdΔ24)和例如dl520)之间的另一重要区别在于,与YB-1核-阴性的细胞或不含有去调节的YB-1的细胞相比,早期基因E1B、E3和E4在YB-1核-阳性的独立于细胞周期的细胞或含有去调节的YB-1的细胞中被更全面地反式激活。与此相反,在δ24中没有或仅有微小差异。然而,与野生型腺病毒相比,dl520和更具体地E1A12S蛋白的反式激活作用显著 降低。然而,该反式激活足以提供YB-1核-阳性的细胞中的有效复制,也如实施例10所示。在本文所述的特别是在这方面所述的E1A蛋白的设计,和编码它们的核酸的设计,以便E1A蛋白与野生型癌基因蛋白E1A相比具有一个或数个缺失和/或突变,包括和特别优选如与dl520或AdΔ24、dl922-947,E1Ad/01/07、CB106和/或在欧洲专利EP 0 931 830中所述腺病毒相关的所述的E1A蛋白的那些设计,是病毒特别是腺病毒的实施方案,其复制受到控制,优选由激活E2-晚期启动子显著控制。优选地,缺失是选自包含CR3区域的缺失和N-末端的缺失和C-末端的缺失的组。基于本文提供的公开内容,本领域技术人员可以产生E1A蛋白的其它允许这种腺病毒复制形式的实施方案。如前所述的E1A蛋白的实施方案是也可以根据本发明的腺病毒使用的实施方案,所述的腺病毒在本文中也称作本发明的腺病毒或I组腺病毒。 In contrast, in the recombinant adenovirus dl520, the CR3 region has been deleted. Thus, dl520 expresses the so-called E1A12S protein, which does not contain the amino acid sequence of the CR3 region. As a result, dl520 can only exert a very weak transactivation function, especially in the E2 region, and thus does not replicate in YB-1 nuclear-negative cells. In YB-1 nuclear-positive cells, YB-1 transactivates the E2 region and thus allows efficient replication of dl520. Applications of systems like dl520 and systems derived from them for the purposes described herein are based on this. Another important difference between the two aforementioned groups of adenoviruses (e.g. delta24 (also referred to herein as AdΔ24) and e.g. dl520) is that in contrast to cells that are nuclear-negative for YB-1 or cells that do not contain deregulated YB-1 Than, the early genes E1B, E3 and E4 were more fully transactivated in YB-1 nuclear-positive cell cycle-independent cells or cells containing deregulated YB-1. In contrast, there are no or only minor differences in δ24. However, the transactivation of dl520 and more specifically the E1A12S protein was significantly reduced compared to wild-type adenovirus. However, this transactivation was sufficient to provide efficient replication in YB-1 nuclear-positive cells, as also shown in Example 10. The design of the E1A proteins described herein, especially in this regard, and the nucleic acids encoding them, so that the E1A protein has one or several deletions and/or mutations compared to the wild-type oncogene protein E1A, including And particularly preferred are those designs of the E1A protein as described in relation to dl520 or AdΔ24, dl922-947, E1Ad/01/07, CB106 and/or adenoviruses described in European Patent EP 0 931 830, viruses especially An embodiment of the adenovirus, the replication of which is controlled, preferably predominantly by activation of the E2-late promoter. Preferably, the deletion is selected from the group comprising a deletion of the CR3 region and a deletion of the N-terminus and a deletion of the C-terminus. Based on the disclosure provided herein, one of skill in the art can generate other embodiments of the E1A protein that permit replication of this form of adenovirus. Embodiments of the E1A protein as previously described are embodiments that can also be used in accordance with the adenoviruses of the invention, also referred to herein as adenoviruses of the invention or group I adenoviruses. ``
本发明的腺病毒、特别是I组腺病毒在本文中也称为衍生物,且可以根据本发明使用,它们典型地包含E1缺失、E1/E3缺失和/或E4缺失,即相应的腺病毒分别不能产生功能活性的E1和/或E3和/或E4表达产物和相应的产物。或者换句话说,这些腺病毒仅能够产生在功能上无活性的E1、E3和/或E4表达产物,其中功能上无活性的E1、E3和/或E4表达产物是这样的表达产物,其或者根本不作为表达产物存在,无论是转录水平和/或翻译水平,或者它以至少缺少一种功能(在野生型腺病毒中归因于它)的形式存在。野生型腺病毒的表达产物固有的这个/这些功能为本领域技术人员所已知,例如在Russell,W.C.,Journal of Virology,81,2573-2604,2000中描述。Russell(上文)也描述了腺病毒和腺病毒载体的设计原理,其结合于此作为参考。还本发明包括,修饰的E1A癌蛋白,即不再反式激活的E1A蛋白和其它的蛋白,例如E1A12S、E1B-55K、E4orf6和/或E3ADP(腺病毒死亡蛋白(ADP))(Tollefson,A.等,J.Virology,70,2296-2306,1996)在这样的载体中单独地或任意组合地表达。单独提及的基因以及本文公开的转基因可以相互独立地克隆到E1和/或E3和/或E4区域中,并且可以使用适当的启动子或在适当启动子的控制下表达。基本上,E1、E3和E4每一个区域适合作为腺病毒核酸内的克隆位点。在一些实施方案中,适当的启动子分别是与E1A、优选修饰的E1A的控制和 表达有关的在本文中公开的那些。 The adenoviruses of the invention, in particular group I adenoviruses, are also referred to herein as derivatives and can be used according to the invention, they typically comprise an E1 deletion, an E1/E3 deletion and/or an E4 deletion, i.e. the corresponding adenovirus Functionally active E1 and/or E3 and/or E4 expression products and corresponding products cannot be produced, respectively. Or in other words, these adenoviruses are only capable of producing functionally inactive E1, E3 and/or E4 expression products, wherein the functionally inactive E1, E3 and/or E4 expression products are expression products which either It does not exist as an expression product at all, either at the level of transcription and/or translation, or it exists in a form lacking at least one of the functions attributed to it in the wild-type adenovirus. This/these functions inherent in the expression product of wild-type adenovirus are known to those skilled in the art, for example described in Russell, W.C., Journal of Virology, 81, 2573-2604, 2000. Russell (supra) also describes the principles of adenovirus and adenoviral vector design, which is incorporated herein by reference. Also included in the invention are modified E1A oncoproteins, i.e. E1A proteins that are no longer transactivated and other proteins such as E1A12S, E1B-55K, E4orf6 and/or E3ADP (adenovirus death protein (ADP)) (Tollefson, A etc., J. Virology, 70, 2296-2306, 1996) are expressed in such vectors alone or in any combination. The genes mentioned individually as well as the transgenes disclosed herein can be cloned independently of one another into the E1 and/or E3 and/or E4 region and can be expressed using or under the control of a suitable promoter. Essentially, each of the regions El, E3 and E4 are suitable as cloning sites within the adenoviral nucleic acid. In some embodiments, suitable promoters are those disclosed herein involved in the control and expression of E1A, preferably modified E1A, respectively. the
最后,在一个实施方案中,根据本发明使用的II组腺病毒是E1B缺陷型的,特别是E1B 19 kDa缺陷型的。如本文一般地使用的,术语缺陷型通常是指一种状况,其中E1B不能表现出野生型E1B的所有特征,并且缺少这些特征中的至少一个。 Finally, in one embodiment, the group II adenovirus used according to the invention is E1B deficient, in particular E1B 19 kDa deficient. As generally used herein, the term defective generally refers to a condition in which an E1B is unable to exhibit all the characteristics of a wild-type E1B, and lacks at least one of these characteristics. the
根据本文公开的本发明使用的II组腺病毒的至少一些实施方案是照此在本领域已知的。根据本发明使用的腺病毒优选地是重组腺病毒,更具体地,如果与野生型相比,在本文提供的技术教导的意义上已经进行了变化。分别删除或诱变与本发明无关的腺病毒核酸序列为本领域技术人员所知。如本文所述,这些缺失可以例如与编码E3和E4的核酸的一部分有关。如果这些缺失不延伸至蛋白E4orf6,换句话说,要根据本发明使用的腺病毒能编码E4orf6,特别优选的是E4缺失。在优选的实施方案中,这些腺病毒核酸可以还包装在病毒衣壳中,并因此形成感染性的颗粒。对根据本发明的核酸的应用同样如此。通常应当注意,腺病毒系统可以缺失单个或数个表达产物。与此相关,这与I组腺病毒和II组腺病毒相关,应当考虑这可能是由编码该表达产物的核酸的突变或缺失造成的,其中这样的突变和缺失分别是彻底的,或者达到不再形成表达产物的程度,或者由调控元件和控制表达的元件造成,例如以不同于野生型的方式发生缺失或活化的启动子和转录因子,其分别在核酸水平上(缺少启动子;顺式-作用元件)或在翻译和转录系统水平上(反式-作用元件)。特别是后一方面可能依赖于各细胞的背景。 At least some embodiments of group II adenoviruses for use in accordance with the invention disclosed herein are as such known in the art. The adenovirus used according to the invention is preferably a recombinant adenovirus, more particularly if it has been altered in the sense of the technical teaching provided herein compared to the wild type. Deletion or mutagenesis, respectively, of adenoviral nucleic acid sequences not relevant to the present invention is known to those skilled in the art. As described herein, these deletions may, for example, be associated with a portion of the nucleic acid encoding E3 and E4. If these deletions do not extend to the protein E4orf6, in other words, the adenovirus to be used according to the invention encodes E4orf6, an E4 deletion is particularly preferred. In a preferred embodiment, these adenoviral nucleic acids may also be packaged in viral capsids and thus form infectious particles. The same applies to the use of the nucleic acids according to the invention. It should generally be noted that adenoviral systems may lack single or several expression products. In connection with this, which is associated with group I adenoviruses and group II adenoviruses, it should be considered that this may be caused by a mutation or deletion of the nucleic acid encoding the expression product, wherein such mutations and deletions, respectively, are complete, or to the extent that no The degree to which the expression product is re-formed, or is caused by regulatory elements and elements controlling expression, such as promoters and transcription factors that are deleted or activated in a manner different from wild-type, respectively, at the nucleic acid level (absent promoter; cis -acting elements) or at the level of translation and transcription systems (trans-acting elements). Especially the latter aspect may depend on the context of each cell. the
除了使用照此已知的腺病毒以外,根据本发明还可以使用新的腺病毒,例如II组腺病毒,其可用于已经公开的在本文所述对于其它腺病毒的目的。本发明的新的腺病毒来自本文提供的技术教导。特别优选的代表是,例如,在图16和图17中描述的病毒Xvir03和Xvir03/01,其设计原理也进一步在实施例11和12中说明。 In addition to the use of adenoviruses known as such, it is also possible according to the invention to use novel adenoviruses, for example group II adenoviruses, which can be used for the purposes already disclosed and described herein for other adenoviruses. The novel adenoviruses of the present invention are derived from the technical teachings provided herein. Particularly preferred representatives are, for example, the viruses Xvir03 and Xvir03/01 described in FIGS. 16 and 17 , the design principles of which are also further illustrated in Examples 11 and 12. the
在载体Xvir03的情形中,将CMV启动子克隆到E1区域中,该E1区域控制被IRES序列分开的E1B 55K和E4orf6的核酸。由于分别将这两个基因克隆进病毒和由于其产生的基因产物,维持复制功效结果以使复制特别发生在YB-1核-阳性的细胞中、更具体地在本发明公开的意义上的 包含去调节的YB-1的那些细胞中,所述结果实际上对应于一种野生型病毒,其中在细胞、特别是肿瘤细胞中选择性的复制。在一个实施方案中,其中存在去调节的YB-1的细胞显示出与正常的或非肿瘤的细胞相比增加的YB-1表达,优选YB-1的隔室独立表达。 In the case of vector Xvir03, the CMV promoter was cloned into the E1 region controlling the nucleic acids of E1B 55K and E4orf6 separated by an IRES sequence. Due to the cloning of these two genes into the virus and due to the gene products produced by them, respectively, maintenance of replication efficacy results such that replication occurs specifically in YB-1 nuclear-positive cells, more specifically inclusion in the sense disclosed in the present invention In those cells with deregulated YB-1, the result actually corresponds to a wild-type virus, which replicates selectively in cells, especially tumor cells. In one embodiment, cells in which deregulated YB-1 is present exhibit increased expression of YB-1 compared to normal or non-neoplastic cells, preferably compartment-independent expression of YB-1. the
另外开发的病毒Xvir03是病毒Xvir03/01,在优选的实施方案中,其中已经克隆了在特定启动子、尤其是肿瘤特异性的或组织特异性的启动子控制下的治疗基因或转基因。与该病毒相关,E4区域也是功能上无活性的,优选缺失。本文所述的转基因也可以克隆到E4区域中,其中这可以作为备选或除了转基因克隆到E3区域中以外而发生。 A further developed virus Xvir03 is the virus Xvir03/01 in which, in a preferred embodiment, a therapeutic gene or transgene has been cloned under the control of a specific promoter, especially a tumor-specific or tissue-specific promoter. In relation to this virus, the E4 region is also functionally inactive, preferably deleted. The transgenes described herein can also be cloned into the E4 region, where this can occur as an alternative or in addition to the transgene cloning into the E3 region. the
本文所述的和特别在下面所述的转基因,还可以分别通过本发明的腺病毒(即I组腺病毒和它们的核酸)或本发明的复制系统或与之相关地表达,并由此包含在含有启动子和核酸序列的表达盒中,其中该核酸序列编码一个或多个所述的转基因。E1、E3和/或E4区是腺病毒基因组中特别合适的克隆位点,但是,克隆位点不限于此。 The transgenes described herein and in particular below may also be expressed by or in connection with the adenoviruses of the invention (i.e. group I adenoviruses and their nucleic acids) or the replication system of the invention, respectively, and thus comprise In an expression cassette comprising a promoter and a nucleic acid sequence encoding one or more of said transgenes. The El, E3 and/or E4 regions are particularly suitable cloning sites in the adenovirus genome, however, the cloning sites are not limited thereto. the
该治疗基因可以是前药基因、细胞因子的基因、诱导细胞凋亡的基因、肿瘤抑制基因、金属蛋白酶抑制剂和/或血管生成抑制剂和酪氨酸激酶抑制剂的基因。另外,可以表达siRNA、适体、反义分子和核酶,其优选地直接针对与癌症相关的靶分子。优选地,单个或多个靶分子选自包含抗性相关因子、抗细胞凋亡因子、癌基因、血管生成因子、DNA合成酶、DNA修复酶、生长因子和它们的受体、转录因子、金属蛋白酶,特别是基质金属蛋白酶和尿激酶类型的纤溶酶原激活剂的组。其优选的实施方案是已经在本文中关于本发明的其它方面公开的那些。 The therapeutic gene may be a prodrug gene, a cytokine gene, an apoptosis-inducing gene, a tumor suppressor gene, a metalloproteinase inhibitor and/or an angiogenesis inhibitor and a tyrosine kinase inhibitor gene. In addition, siRNAs, aptamers, antisense molecules and ribozymes can be expressed, preferably directed against cancer-associated target molecules. Preferably, the single or multiple target molecules are selected from the group consisting of resistance-related factors, anti-apoptotic factors, oncogenes, angiogenic factors, DNA synthetases, DNA repair enzymes, growth factors and their receptors, transcription factors, metal Group of proteases, in particular matrix metalloproteases and plasminogen activators of the urokinase type. Preferred embodiments thereof are those already disclosed herein in relation to other aspects of the invention. the
可以用于优选的实施方案中的可能的前药基因是,例如,胞嘧啶脱氨酶,胸苷激酶,羧肽酶,尿嘧啶磷酸核糖基转移酶;或嘌呤核苷磷酸化酶(PNP);[Kirn等,Trends in Molecular Medicine,卷8,No.4(增刊),2002;Wybranietz W.A.等,Gene Therapy,8,1654-1664,2001;Niculescu-Duvaz等,Curr.Opin.Mol.Therapy,1,480.486,1999;Koyama等,Cancer GeneTherapy,7,1015-1022,2000;Rogers等,Human Gene Therapy,7,2235-2245,1996;Lockett等,Clinical Cancer Res.,3,2075-2080,1997;Vijayakrishna等,J.Pharmacol.和Exp.Therapeutics,304,1280-1284,2003]。 Possible prodrug genes that can be used in preferred embodiments are, for example, cytosine deaminase, thymidine kinase, carboxypeptidase, uracil phosphoribosyltransferase; or purine nucleoside phosphorylase (PNP) [Kirn et al., Trends in Molecular Medicine, Vol. 8, No.4 (Suppl.), 2002; Wybranietz W.A. et al., Gene Therapy, 8, 1654-1664, 2001; Niculescu-Duvaz et al., Curr.Opin.Mol.Therapy, 1, 480.486, 1999; Koyama et al., Cancer Gene Therapy, 7, 1015-1022, 2000; Rogers et al., Human Gene Therapy, 7, 2235-2245, 1996; Lockett et al., Clinical Cancer Res., 3, 2075-2080, 1997 ; Vijayakrishna et al., J. Pharmacol. and Exp. Therapeutics, 304, 1280-1284, 2003]. the
可以用于优选的实施方案中的可能的细胞因子是,例如,GM-CSF,TNF-α,Il-1 2,Il-2,Il-6,CSF,干扰素-γ;[Gene Therapy,Advances inPharmacology,卷40,编辑:J.Thomas August,Academic Press;Zhang和Degroot,Endocrinology,144,1393-1398,2003;Descamps等,J.Mol.Med.,74,183-189,1996;Majumdar等,Cancer Gene Therapy,7,1086-1099,2000]。 Possible cytokines that may be used in a preferred embodiment are, for example, GM-CSF, TNF-α, Il-12, Il-2, Il-6, CSF, Interferon-γ; [Gene Therapy, Advances inPharmacology, Vol. 40, editors: J.Thomas August, Academic Press; Zhang and Degroot, Endocrinology, 144, 1393-1398, 2003; Descamps et al., J.Mol.Med., 74, 183-189, 1996; Majumdar et al., Cancer Gene Therapy, 7, 1086-1099, 2000]. the
可以用于优选的实施方案中的可能的细胞凋亡诱导基因是,例如,核心蛋白聚糖:[Tralhao等,FASEB J,17,464-466,2003];成视网膜细胞瘤94:[Zhang等,Cancer Res.,63,760-765,2003];Bax和Bad[Zhang等,Hum.GeneTher.,20,205 1-2064,2002];细胞凋亡素(apoptin)[Noteborn和Pietersen,Adv.Exp.Med.Biol.,465,153-161,2000]];ADP[Toth等,Cancer GeneTherapy,10,193-200,2003];bcl-xs[Sumantran等,Cancer Res,55,2507-25 12,1995];E4orf4[Braithwaite和Russell,Apoptosis,6,359-370,2001];FasL,Apo-1和Trail[Boehringer Manheim,Guide to Apoptotic Pathways,Arai等,PNAC,94,13862-13867,1997];Bims[Yamaguchi等,Gene Therapy,10,375-385,2003;GNR163:Oncology News,17June,2000]。 Possible apoptosis-inducing genes that can be used in preferred embodiments are, for example, decorin: [Tralhao et al., FASEB J, 17, 464-466, 2003]; Retinoblastoma 94: [Zhang et al. , Cancer Res., 63,760-765, 2003]; Bax and Bad [Zhang et al., Hum.GeneTher., 20, 205 1-2064, 2002]; Apoptin (apoptin) [Noteborn and Pietersen, Adv. Exp.Med.Biol., 465, 153-161, 2000]]; ADP [Toth et al., Cancer GeneTherapy, 10, 193-200, 2003]; bcl-xs [Sumantran et al., Cancer Res, 55, 2507-25 12 , 1995]; E4orf4 [Braithwaite and Russell, Apoptosis, 6, 359-370, 2001]; FasL, Apo-1 and Trail [Boehringer Manheim, Guide to Apoptotic Pathways, Arai et al., PNAC, 94, 13862-13867, 1997] ; Bims [Yamaguchi et al., Gene Therapy, 10, 375-385, 2003; GNR163: Oncology News, 17 June, 2000]. the
可以用于优选的实施方案中的可能的肿瘤抑制基因是,例如,E1A,p53,p16,p21,p27,或MDA-7。[Opalka等,Cell Tissues Organs,172,126-132,2002,Ji等,Cancer Res.,59,3333-3339,1999,Su等,Oncogene,22,1164-1180,2003]。 Possible tumor suppressor genes that may be used in preferred embodiments are, for example, ElA, p53, p16, p21, p27, or MDA-7. [Opalka et al., Cell Tissues Organs, 172, 126-132, 2002, Ji et al., Cancer Res., 59, 3333-3339, 1999, Su et al., Oncogene, 22, 1164-1180, 2003]. the
可以用于优选的实施方案中的可能的血管生成抑制剂是,例如,血管内皮抑素(endostatin)或血管生长抑素(angiostatin)[Hajitou等,FASEB J.,16,1802-1804,2002],和针对VEGF的抗体(Ferrara,N.,Semin Oncol 2002Dec;29(6 Suppl 16):10-4)。 Possible angiogenesis inhibitors that can be used in a preferred embodiment are, for example, endostatin or angiostatin [Hajitou et al., FASEB J., 16, 1802-1804, 2002] , and antibodies against VEGF (Ferrara, N., Semin Oncol 2002 Dec; 29(6 Suppl 16): 10-4). the
可以用于优选的实施方案中的可能的金属蛋白酶抑制剂是,例如,Timp-3[Ahonen等,Mol Therapy,5,705-715,2002];PAI-1;[Soff等,J.Clin.Invest.,96,2593-2600,1995];Timp-1,[Brandt K.Curr.Gene Therapy,2,255-271,2002]。 Possible metalloproteinase inhibitors that can be used in preferred embodiments are, for example, Timp-3 [Ahonen et al., Mol Therapy, 5, 705-715, 2002]; PAI-1; [Soff et al., J.Clin. Invest., 96, 2593-2600, 1995]; Timp-1, [Brandt K. Curr. Gene Therapy, 2, 255-271, 2002]. the
可以通过I组腺病毒和II组腺病毒表达的本发明意义上的其它转基因也是酪氨酸激酶抑制剂。示例性的酪氨酸激酶是EGFR(表皮生长因子受体)[Onkologie,Entstehung und Progression maligner Tumoren;author: Christoph Wagner,Georg Thieme Verlag,Stuttgart,1999]。优选的酪氨酸激酶抑制剂是曲妥单抗(herceptin)[Zhang H等,Cancer Biol Ther.2003,Jul-Aug;2(4 suppl 1):S122-6]。 Other transgenes within the meaning of the invention which can be expressed by group I and group II adenoviruses are also tyrosine kinase inhibitors. An exemplary tyrosine kinase is EGFR (epidermal growth factor receptor) [Onkologie, Entstehung und Progression maligner Tumoren; author: Christoph Wagner, Georg Thieme Verlag, Stuttgart, 1999]. A preferred tyrosine kinase inhibitor is trastuzumab (herceptin) [Zhang H et al., Cancer Biol Ther. 2003, Jul-Aug; 2(4 suppl 1):S122-6]. the
SiRNA(短干扰RNA)由2条、优选2条分开的RNA链组成,其由于碱基互补性而彼此杂交,该互补性是指它们基本上碱基配对地存在,且优选地具有高达50个核苷酸、优选18-30个核苷酸、更优选少于25个核苷酸和最优选21、22或23个核苷酸的长度,其中这些数字是指siRNA的单链,特别是一段单链序列的长度,该单链与一条、更具体地与第二条单链杂交或与其碱基配对。SiRNA特异性地诱导或介导mRNA的降解。其所需的特异性由siRNA的序列和由此它的结合位点介导。待降解的靶序列基本上与siRNA形成链的第一或第二条链互补。尽管作用的确切方式还不清楚,推测siRNA代表细胞在发育期间抑制分开的等位基因(distinct allele)和保护其自身对抗病毒的生物学策略。siRNA介导的RNA干扰可以用作通过引入基因特异性的双链RNA来特异性地抑制或完全剔除蛋白的表达的方法。对于高等生物,包含19-23个核苷酸的siRNA照此是特别合适的,因为它不会激活非特异性的防御反应,例如白介素应答。直接转染21个核苷酸的具有对称的2个核苷酸长的3’突出端的双链RNA适用于介导哺乳动物细胞中的RNA干扰,并且与其它技术如核酶和反义分子相比是高效的(Elbashir,S.Harborth J.Lendeckel W. Yalvcin,A.WeberK Tuschl T:Duplexes of 21-nucleotide RNAs mediate RNA interference incultured mammalian cells.Nature 2001,411:494-498)。仅需要极少siRNA分子即可抑制靶基因的表达。为了避免外源施用的siRNA的限制,该限制特别在于干扰现象和siRNA分子特异性传递的瞬时性质,现有技术使用允许内源性siRNA表达的载体。为此目的,例如,将具有64个核苷酸长度的寡核苷酸以有义和反义方向引入包含19个核苷酸长的靶序列的载体,其被例如9个核苷酸长的间隔序列分开。产生的转录物折叠成发卡结构,其茎结构具有例如19个碱基对。环在细胞中快速降解,以便产生功能性的siRNA(Brummelkamp等,Science,296,550-553,2002)。 siRNA (short interfering RNA) consists of 2, preferably 2 separate RNA strands, which hybridize to each other due to base complementarity, which means that they exist essentially in base pairing, and preferably with up to 50 nucleotides, preferably 18-30 nucleotides, more preferably less than 25 nucleotides and most preferably 21, 22 or 23 nucleotides in length, where these numbers refer to a single strand of siRNA, in particular a stretch The length of a single-stranded sequence that hybridizes or base-pairs with one, more specifically, a second single strand. SiRNA specifically induces or mediates the degradation of mRNA. Its desired specificity is mediated by the sequence of the siRNA and thus its binding site. The target sequence to be degraded is substantially complementary to either the first or second strand of the siRNA forming strand. Although the exact mode of action is unclear, it is speculated that siRNAs represent a biological strategy by which cells suppress distinct alleles during development and protect themselves against viruses. siRNA-mediated RNA interference can be used as a method to specifically inhibit or completely knock out protein expression by introducing gene-specific double-stranded RNA. For higher organisms, an siRNA comprising 19-23 nucleotides is particularly suitable as such, since it does not activate non-specific defense responses, such as interleukin responses. Direct transfection of 21 nucleotide double-stranded RNA with symmetrical 2 nucleotide long 3' overhangs is suitable for mediating RNA interference in mammalian cells and is comparable to other techniques such as ribozymes and antisense molecules than is efficient (Elbashir, S.Harborth J.Lendeckel W. Yalvcin, A.WeberK Tuschl T: Duplexes of 21-nucleotide RNAs mediate RNA interference incultured mammalian cells. Nature 2001, 411: 494-498). Only very few siRNA molecules are required to inhibit the expression of target genes. To avoid the limitations of exogenously administered siRNAs, particularly in the interference phenomenon and the transient nature of the specific delivery of siRNA molecules, the prior art uses vectors that allow the expression of endogenous siRNAs. For this purpose, for example, oligonucleotides with a length of 64 nucleotides are introduced in sense and antisense orientation into a vector containing a target sequence of 19 nucleotides long, which is replaced by, for example, a 9 nucleotide long Spacer sequences are separated. The resulting transcript folds into a hairpin structure with a stem structure of, for example, 19 base pairs. The loops are rapidly degraded in cells in order to generate functional siRNAs (Brummelkamp et al., Science, 296, 550-553, 2002). the
编码YB-1的核酸可以包含介导YB-1转运至核内的核酸序列,所述YB-1可以是根据本发明使用的腺病毒,特别是II组腺病毒,也可以是本 发明的腺病毒,即I组腺病毒,的一个实施方案中腺病毒的一部分。依照本发明的核酸、腺病毒和腺病毒系统以及现有技术已知的腺病毒,例如Onyx-015,AdΔ24,dl922-947,E1Ad/01/07,CB016,dl 520和在专利EP 0 931830中描述的腺病毒可以分别用作腺病毒和腺病毒系统,和相应的核酸,结合根据本发明的这些核酸。介导核转运的适当的核酸序列为本领域技术人员所已知,例如在(Whittaker,G.R.等,Virology,246,1-23,1998;Friedberg,E.C.,TIBS 17,347,1992;Jans,D.A.等,Bioassays 2000 Jun;22(6):532-44;Yoneda,Y.,J.Biocehm.(Tokyo)1997 May;121(5):811-7;Boulikas,T.,Crit.Rev.Eukaryot.Gene Expr.1993;3(3):193-227;Lyons RH,Mol.Cell Biol.,7,2451-2456,1987)中描述。介导核转运的核酸序列可以使用不同的原理。一种这样的原理是,YB-1与信号肽一起形成融合蛋白,或为其提供这样的信号肽,借助该信号肽将其导入细胞核内,借此发生根据本发明的腺病毒的复制。
The nucleic acid encoding YB-1 may contain a nucleic acid sequence that mediates the transport of YB-1 into the nucleus, and the YB-1 may be an adenovirus used according to the present invention, especially a group II adenovirus, or the adenovirus of the present invention The virus, ie the group I adenovirus, is part of an adenovirus in one embodiment. Nucleic acids according to the invention, adenoviruses and adenovirus systems and adenoviruses known from the prior art, such as Onyx-015, AdΔ24, dl922-947, E1Ad/01/07, CB016,
可以在根据本发明使用的腺病毒、更具体地是II组腺病毒,但也是根据本发明的腺病毒,即I组腺病毒的设计中使用的另一原理是,给YB-1提供转运序列,其优选从细胞质中的合成开始,将YB-1转移或者移位至细胞核内,并促进那里的病毒复制。介导转运至核的特别有效的核酸序列的实例是HIV的TAT序列,其例如与其它该类合适的核酸序列一起记载在Efthymiadis,A.,Briggs,LJ,Jans,DA.,JBC 273,1623-1628,1998。本发明包括,按照本发明使用的腺病毒,具体地II组腺病毒,但也是根据本发明的腺病毒,即I组腺病毒,包含编码介导核转运的肽的核酸序列。 Another principle that can be used in the design of the adenoviruses used according to the invention, more specifically group II adenoviruses, but also the adenoviruses according to the invention, i.e. group I adenoviruses, is that YB-1 is provided with a transit sequence , which preferably starts with synthesis in the cytoplasm, transfers or translocates YB-1 into the nucleus and promotes viral replication there. An example of a particularly efficient nucleic acid sequence that mediates translocation to the nucleus is the TAT sequence of HIV, which is described, for example, together with other such suitable nucleic acid sequences in Efthymiadis, A., Briggs, LJ, Jans, DA., JBC 273, 1623 -1628, 1998. The present invention includes that the adenoviruses used according to the invention, in particular group II adenoviruses, but also the adenoviruses according to the invention, ie group I adenoviruses, comprise a nucleic acid sequence encoding a peptide mediating nuclear transport. the
本发明包括,YB-1以其全长的、特别是以对应于野生型YB-1的形式存在。而且,本发明包括,YB-1作为衍生物,例如以缩短或截短形式使用或存在。与本发明有关的可以使用或可以存在的YB-1衍生物是优选能够结合E2-晚期启动子和因此激活腺病毒E2区域基因表达的YB-1。该衍生物特别包含本文公开的YB-1衍生物。通过在N-末端、在C-末端或在氨基酸序列内缺失单个或数个氨基酸可以产生其它衍生物。本发明包括,还将YB-1片段用作本发明意义上的YB-1蛋白。在Jürchott K等[JBC2003,278,27988-27996]的论文中公开了多种YB-1片段,其特征在于在C-和N-末端的缺失。各种YB-1片段的分布已经证实,冷休克域(CSD)和 C-末端都与细胞周期调节的使YB-1进入细胞核中的转运有关。因此本发明包括,与天然YB-1相比,与E1B55k和E4orf6的创造性表达有关的截短的YB-1(本文也称作YB-1蛋白)更好地迁移进核中并由此介导更强的CPE,而不需更好地结合E2-晚期启动子,其中不能排除的是,截短的YB-1还更好地迁移进核中并造成两种效果,即诱导CPE和结合到E2-晚期启动子。最后,这种截短的YB-1片段也可以更好地迁移进核中并更有效地结合到E2-晚期启动子,而不诱导更好的CPE。本发明还包括,截短的YB-1蛋白和片段分别包含与这里公开的全长YB-1有关的其它序列,特别是细胞定位信号序列(NLS)等。 The present invention includes that YB-1 exists in its full length, especially in a form corresponding to wild-type YB-1. Furthermore, the invention includes the use or presence of YB-1 as a derivative, for example in a shortened or truncated form. YB-1 derivatives which can be used or which can be present in connection with the present invention are YB-1 which are preferably able to bind the E2-late promoter and thus activate gene expression in the E2 region of the adenovirus. The derivatives specifically comprise the YB-1 derivatives disclosed herein. Other derivatives can be produced by deletion of single or several amino acids at the N-terminus, at the C-terminus or within the amino acid sequence. The invention encompasses that YB-1 fragments are also used as YB-1 proteins in the sense of the invention. In the paper by Jürchott K et al. [JBC2003, 278, 27988-27996] various YB-1 fragments are disclosed which are characterized by deletions at the C- and N-terminus. The distribution of various YB-1 fragments has demonstrated that both the cold shock domain (CSD) and the C-terminus are involved in cell cycle-regulated transport of YB-1 into the nucleus. The invention therefore includes that the truncated YB-1 (also referred to herein as the YB-1 protein) associated with creative expression of E1B55k and E4orf6 better migrates into the nucleus and thereby mediates Stronger CPE without better binding to the E2-late promoter, where it cannot be ruled out that the truncated YB-1 also migrates better into the nucleus and causes both effects, induction of CPE and binding to E2 - late promoter. Finally, this truncated YB-1 fragment could also migrate better into the nucleus and bind more efficiently to the E2-late promoter without inducing better CPE. The present invention also includes that the truncated YB-1 protein and fragment respectively contain other sequences related to the full-length YB-1 disclosed here, especially the cell localization signal sequence (NLS) and the like. the
关于前述各种其它基因和分别由腺病毒编码和表达的基因产物,原则上它们还可以分别以任何组合的方式编码和表达。 Regarding the aforementioned various other genes and gene products respectively encoded and expressed by adenoviruses, they may also be encoded and expressed in any combination, respectively, in principle. the
本发明包括,术语腺病毒和腺病毒系统应当理解为具有基本相同的含义。术语腺病毒应当特别理解为,与包含衣壳和核酸的完整病毒颗粒相关。术语腺病毒系统特别集中于一项事实,即核酸与野生型相比有所改变。优选地,这些变化包含腺病毒基因组结构的变化,如由缺失和/或增加和/或突变启动子、调节序列和/或编码序列如可读框产生。另外,术语腺病毒系统更优选地作为载体使用,它可以例如用于基因治疗。 The present invention encompasses that the terms adenovirus and adenovirus system should be understood to have substantially the same meaning. The term adenovirus is to be understood in particular in relation to whole virus particles comprising capsid and nucleic acid. The term adenoviral system focuses specifically on the fact that the nucleic acid is altered compared to the wild type. Preferably, these changes comprise changes in the genome structure of the adenovirus, eg resulting from deletions and/or additions and/or mutations of promoters, regulatory sequences and/or coding sequences such as open reading frames. In addition, the term adenoviral system is more preferably used as a vector, which can be used, for example, in gene therapy. the
前面的说明,包括腺病毒和腺病毒系统的任何应用和任何设计,也适用于编码它们的核酸,反之亦然。 The foregoing description, including any use and any design of adenoviruses and adenovirus systems, also applies to nucleic acids encoding them, and vice versa. the
根据本发明可能的是,根据本发明使用的腺病毒、更具体地II组腺病毒、但也包括I组腺病毒和编码它们的核酸分别可以是任何各自的腺病毒核酸,该腺病毒核酸照这样或与其它核酸序列组合导致复制事件。如本文所解释,可能通过辅助病毒提供复制所需的序列和/或基因产物。在提及编码核酸序列方面和在该核酸序列是已知的核酸序列的方面,本发明包括不仅使用相同的序列,而且使用其衍生的序列。术语衍生序列应当特别是指仍产生基因产物(核酸或多肽)的任何序列,其具有相应于非衍生序列的功能或非衍生序列的功能。这可以通过本领域技术人员已知的常规试验确定。该衍生的核酸序列的实例是编码相同基因产物、特别是相同氨基酸序列的那些核酸序列,然而,由于遗传密码的简并性而具有不同的碱基序列。 It is possible according to the invention that the adenoviruses used according to the invention, more particularly group II adenoviruses, but also group I adenoviruses and the nucleic acids encoding them, respectively, can be any respective adenovirus nucleic acid according to This or combination with other nucleic acid sequences results in a replication event. As explained herein, the sequences and/or gene products required for replication may be provided by a helper virus. With regard to the reference to a coding nucleic acid sequence and to the extent that the nucleic acid sequence is a known nucleic acid sequence, the invention encompasses the use not only of identical sequences but also of sequences derived therefrom. The term derived sequence shall in particular refer to any sequence which still produces a gene product (nucleic acid or polypeptide), which has a function corresponding to or a function of the non-derived sequence. This can be determined by routine experiments known to those skilled in the art. Examples of such derived nucleic acid sequences are those encoding the same gene product, especially the same amino acid sequence, however, having different base sequences due to the degeneracy of the genetic code. the
在一个实施方案中,分别关于根据本发明的II腺病毒和/或根据本发明的对应的腺病毒复制系统和根据本发明的它们应用,腺病毒核酸对于表达癌基因蛋白是缺失的、特别是E1A蛋白缺失,即,既不编码12S E1A蛋白(本文也称作E1A12S蛋白)也不编码13S E1A蛋白(本文也称作E1A13S蛋白),或者它均不编码12S E1A蛋白和13S E1A蛋白,或被修饰的,如本文所定义,如果没有相反的说明,腺病毒复制系统另外还包含辅助病毒的核酸,其中辅助病毒的核酸包含编码癌基因蛋白、特别是E1A蛋白的核酸序列,其分别具有下列特征和赋予腺病毒下列特征:它优选不在YB-1核-阴性的细胞中复制,而在独立于细胞周期的YB-1核-阳性的细胞中或表现去调节的YB-1的细胞中复制,反式激活至少一种病毒基因,特别是E1B55kDa,E4orf6,E4orf3和/或E3ADP,在YB-1核-阳性的细胞中,和/或不将细胞YB-1转移至核内。本发明包括,本文所述转基因是由辅助病毒单独地或集中地编码和/或表达。对于I组腺病毒和II组腺病毒均施用辅助病毒。 In one embodiment, with regard to the II adenovirus according to the invention and/or the corresponding adenovirus replication system according to the invention and their use according to the invention, respectively, the adenoviral nucleic acid is deficient for the expression of oncogene proteins, in particular The E1A protein is absent, i.e., neither encodes the 12S E1A protein (also referred to herein as the E1A12S protein) nor the 13S E1A protein (also referred to herein as the E1A13S protein), or it neither encodes the 12S E1A protein nor the 13S E1A protein, or is Modified, as defined herein, if not stated to the contrary, the adenoviral replication system additionally comprises a nucleic acid of a helper virus, wherein the nucleic acid of the helper virus comprises a nucleic acid sequence encoding an oncogene protein, in particular an E1A protein, which respectively has the following characteristics and endow the adenovirus with the following characteristics: it preferably does not replicate in YB-1 nuclear-negative cells, but replicates in cells cycle-independent of YB-1 nuclear-positive cells or cells expressing deregulated YB-1, Transactivation of at least one viral gene, particularly E1B55kDa, E4orf6, E4orf3 and/or E3ADP, in YB-1 nuclear-positive cells, and/or non-translocation of cellular YB-1 into the nucleus. The invention encompasses that the transgenes described herein are encoded and/or expressed individually or collectively by a helper virus. Helper virus was administered for both Group I and Group II adenoviruses. the
而且,在根据本发明的这种腺病毒复制系统的一个实施方案中,腺病毒核酸和/或辅助病毒的核酸是作为可复制的载体存在。 Furthermore, in one embodiment of this adenoviral replication system according to the invention, the nucleic acid of the adenovirus and/or the nucleic acid of the helper virus is present as a replicable vector. the
本发明还包括,编码I组腺病毒和/或II组腺病毒的核酸优选地存在于表达载体中,该表达载体根据本发明使用。 The invention also encompasses that the nucleic acid encoding the group I adenovirus and/or the group II adenovirus is preferably present in an expression vector which is used according to the invention. the
在另一方面,本发明还涉及包含至少两个载体的载体组,其中载体组总共包含如本文所述的用于I组腺病毒和/或II组腺病毒的腺病毒复制系统,载体组根据本发明使用。在一个实施方案中,腺病毒复制系统的每个元件排列在单个载体、优选表达载体上。 In another aspect, the present invention also relates to a vector set comprising at least two vectors, wherein the vector set comprises in total an adenoviral replication system for group I adenoviruses and/or group II adenoviruses as described herein, the set of vectors according to The present invention uses. In one embodiment, each element of the adenoviral replication system is arranged on a single vector, preferably an expression vector. the
最后,本发明的另一方面还涉及细胞的应用,所述细胞含有一个或数个核酸,所述核酸编码的I组腺病毒和/或II组腺病毒优选地根据本发明使用、和将要根据本发明使用,和/或相应的腺病毒复制系统和/或相应的载体和/或根据本发明的载体组,用于本文关于各种腺病毒所述的非常相同的目的。 Finally, another aspect of the invention also relates to the use of cells containing one or several nucleic acids encoding a group I adenovirus and/or a group II adenovirus preferably used according to the invention and to be used according to the The invention uses, and/or the corresponding adenovirus replication system and/or the corresponding vectors and/or the set of vectors according to the invention, for the very same purpose as described herein for the various adenoviruses. the
前述腺病毒构建体和特别是它们的核酸和编码它们的核酸,也可以以多份的形式导入细胞、优选肿瘤细胞中,于是由于各种单独元件的存在,它们可以这样一起作用,好像单个元件分别来源于单个核酸和单个或数个 腺病毒。 The aforesaid adenoviral constructs and in particular their nucleic acids and nucleic acids encoding them can also be introduced in multiple copies into cells, preferably tumor cells, so that due to the presence of the various individual elements they can thus act together as if a single element Derived from a single nucleic acid and a single or several adenoviruses, respectively. the
根据本发明使用的编码I组腺病毒和/或II组腺病、对应的腺病毒系统或其部分的核酸也可以作为载体存在。优选地,这些载体是病毒载体。当核酸包含腺病毒核酸时,优选地病毒颗粒为载体。然而,本发明也包括,所述核酸以质粒载体存在。在每个情形中,载体包含允许和控制插入的核酸的增殖(即复制)和插入的核酸的任选表达的元件。适当的载体、优选表达载体和各自的元件是本领域技术人员已知的,例如在Grunhaus,A.,Horwitz,M.S.,1994,Adenoviruse as cloning vectors.In Rice,C.,editor.,Seminars in Virology,London:Saunders Scientific Publications中描述。 Nucleic acids encoding group I adenoviruses and/or group II adenoviruses, corresponding adenovirus systems or parts thereof for use according to the invention may also be present as vectors. Preferably, these vectors are viral vectors. When the nucleic acid comprises adenoviral nucleic acid, preferably the viral particle is the vector. However, the invention also includes that said nucleic acid is present as a plasmid vector. In each case, the vector comprises elements that permit and control the propagation (ie, replication) and, optionally, expression of the inserted nucleic acid. Suitable vectors, preferably expression vectors and the respective elements are known to those skilled in the art, for example in Grunhaus, A., Horwitz, M.S., 1994, Adenovirus as cloning vectors. In Rice, C., editor., Seminars in Virology , London: described in Saunders Scientific Publications. the
涉及载体组的方面考虑前述实施方案,既所述核酸的各种元件不一定仅包含在一个载体中。因此,载体组由至少两个载体组成。另外,关于载体进行任何论述也分别适用于载体和载体组。 Aspects relating to sets of vectors contemplate the foregoing embodiments, ie the various elements of the nucleic acid are not necessarily contained in only one vector. Thus, a vector set consists of at least two vectors. Additionally, any discussion made with respect to vectors also applies to vectors and vector groups, respectively. the
I组腺病毒和/或II组腺病的特征分别在于本文公开的各种核酸和基因产物,并可以另外包含本领域技术人员已知的且是野生型腺病毒固有的所有那些元件(Shenk,T.:Adenoviridae:The virus and their replication.FieldsVirology,第三卷,编辑.Fields,B.N.,Knipe,D.M.,Howley,P.M.等,Lippincott-Raven Publishers,Philadelphia,1996,第67章)。 Group I adenoviruses and/or group II adenoviruses are characterized by the various nucleic acids and gene products disclosed herein, respectively, and may additionally contain all those elements known to those skilled in the art and inherent to wild-type adenoviruses (Shenk, T.: Adenoviridae: The virus and their replication. Fields Virology, Volume III, eds. Fields, B.N., Knipe, D.M., Howley, P.M. et al., Lippincott-Raven Publishers, Philadelphia, 1996, Chapter 67). the
为了解释而不是限制本发明,下面将简单地讨论腺病毒的复制。 In order to illustrate and not limit the present invention, adenovirus replication will be briefly discussed below. the
腺病毒的复制是非常复杂的过程,通常是基于人转录因子E2F。在病毒感染期间,首先表达“早期基因”E1、E2、E3和E4。“晚期基因”组负责合成病毒的结构蛋白。对于早期基因以及晚期基因的激活,由编码不同的E1A和E1B蛋白的两个转录单元E1A和E1B组成的E1区域起到关键的作用,因为它们诱导E2、E3和E4基因的转录(Nevins,J.R.,Cell 26,213-220,1981)。另外,E1A蛋白可以启动静止细胞中的DNA合成,并因此促使它们进入S期(参见Boulanger和Blair,1991)。另外,它们与Rb类的肿瘤抑制剂相互作用(Whyte,P.等,Nature 334,124-127,1988)。在这种情况下,释放细胞转录因子E2F。E2F因子可以随后结合细胞基因以及病毒基因的相应的启动子区域(特别是腺病毒E2早期启动子),并引发转录和由此的复制(Nevins,J.R.,Science 258,424-429,1992)。pRb和E2F的活性通过磷酸化调节。pRb的低磷酸化形式主要存在于G1和M期。相反,pRb 的超磷酸化形式存在于S和G2期。通过pRb的磷酸化,从由E2F和低磷酸化的pRb组成的复合体中释放E2F。E2F从由E2F和低磷酸化的pRb的复合体中的释放导致E2F依赖性的基因的转录。E1A蛋白仅仅结合低磷酸化形式的pRb,其中E1A与pRb的结合大部分通过E1A蛋白的CR2区域发生。另外,它还与CR1区域结合,尽管亲和力较低(Ben-Israel和Kleiberger,Frontiers in Bioscience,7,1369-1395,2002;Helt和Galloway,Carcinogenesis,24,159-169,2003)。 Adenovirus replication is a very complex process, usually based on the human transcription factor E2F. During viral infection, the "early genes" El, E2, E3 and E4 are first expressed. The group of "late genes" is responsible for the synthesis of the structural proteins of the virus. For the activation of early genes as well as late genes, the E1 region, composed of two transcriptional units E1A and E1B encoding distinct E1A and E1B proteins, plays a key role because they induce the transcription of E2, E3 and E4 genes (Nevins, J.R. , Cell 26, 213-220, 1981). In addition, E1A proteins can initiate DNA synthesis in quiescent cells and thus drive them into S phase (see Boulanger and Blair, 1991). In addition, they interact with tumor suppressors of the Rb class (Whyte, P. et al., Nature 334, 124-127, 1988). In this case, the cellular transcription factor E2F is released. E2F factors can then bind to the corresponding promoter regions of cellular genes as well as viral genes (in particular the adenovirus E2 early promoter) and initiate transcription and thus replication (Nevins, J.R., Science 258, 424-429, 1992). The activities of pRb and E2F are regulated by phosphorylation. The hypophosphorylated form of pRb is mainly present in G1 and M phases. In contrast, hyperphosphorylated forms of pRb are present in S and G2 phases. Upon phosphorylation of pRb, E2F is released from the complex consisting of E2F and hypophosphorylated pRb. Release of E2F from the complex formed by E2F and hypophosphorylated pRb results in the transcription of E2F-dependent genes. The E1A protein only binds to the low phosphorylated form of pRb, and most of the binding of E1A to pRb occurs through the CR2 region of the E1A protein. In addition, it also binds to the CR1 region, albeit with lower affinity (Ben-Israel and Kleiberger, Frontiers in Bioscience, 7, 1369-1395, 2002; Helt and Galloway, Carcinogenesis, 24, 159-169, 2003). the
复制的引发和完成特别需要E2区域的基因产物,因为它们编码三个关键蛋白。E2蛋白的转录受两个启动子控制,“E2-早期E2F-依赖型”启动子,其在本文中也称为E2-早期启动子或早期E2启动子,和“E2-晚期”启动子(Swaminathan和Thimmapaya,The Molecular Repertoire ofAdenoviruses III:Current Topics in Microbiology and Immunology,卷199,177-194,Springer Verlag 1995)。另外,E4区域的产物与E1A和E1B-55kDa蛋白一起对E2F的活性和p53的稳定性起重要作用。例如,通过由E4区域编码的E4orf6/7与由E2F和DP1组成的杂二聚体直接相互作用更加反式激活E2启动子(Swaminathan和Thimmapaya,JBC 258,736-746,1996)。另外,p53使由E1B-55kDa和E4orf6组成的复合体失活(Steegenga,W.T.等,Oncogene 16,349-357,1998),以便成功地完成裂解性的感染周期。另外,E1B-55kDa蛋白具有另一重要功能,即当与E4orf6蛋白相互作用时,它促进病毒RNA从核中输出,其中细胞的RNA保持在核内(Bridge和Ketner,Virology 174,345-353,1990)。另一个重要发现是,由E1B-55kDa/E4orf6组成的蛋白复合体定位于所谓的“病毒包涵体”。推测这些结构是复制和转录的位点(Ornelles和Shenk,J.Virology 65,424-429,1991)。 Gene products in the E2 region are specifically required for initiation and completion of replication, as they encode three key proteins. Transcription of the E2 protein is controlled by two promoters, the "E2-early E2F-dependent" promoter, which is also referred to herein as the E2-early promoter or the early E2 promoter, and the "E2-late" promoter ( Swaminathan and Thimmapaya, The Molecular Repertoire of Adenoviruses III: Current Topics in Microbiology and Immunology, Vol. 199, 177-194, Springer Verlag 1995). In addition, the product of the E4 region plays an important role in the activity of E2F and the stability of p53 together with the E1A and E1B-55kDa proteins. For example, the E2 promoter is more transactivated by direct interaction of E4orf6/7 encoded by the E4 region with a heterodimer composed of E2F and DP1 (Swaminathan and Thimmapaya, JBC 258, 736-746, 1996). In addition, p53 inactivates a complex consisting of E1B-55kDa and E4orf6 (Steegenga, W.T. et al., Oncogene 16, 349-357, 1998) in order to successfully complete the lytic infection cycle. In addition, the E1B-55kDa protein has another important function, that is, when interacting with the E4orf6 protein, it promotes the export of viral RNA from the nucleus, where the cellular RNA remains (Bridge and Ketner, Virology 174, 345-353, 1990). Another important finding is that the protein complex consisting of E1B-55kDa/E4orf6 localizes to so-called "viral inclusion bodies". These structures are presumed to be sites of replication and transcription (Ornelles and Shenk, J. Virology 65, 424-429, 1991). the
对于复制、特别是对于腺病毒的释放的另一重要区域是E3区域。E3区域更具体地包含多种相对小蛋白的遗传信息,该蛋白不是腺病毒体外感染周期(即在细胞培养中)所必需的。然而,它们对于体内急性和/或潜伏感染期间的病毒的存活起重要作用,因为它们尤其具有免疫调节和细胞凋亡功能(Marshall S.Horwitz,Virololgie,279,1-8,2001;Russell,上文)。可以证实,具有约11.6 kDa大小的蛋白能诱导细胞死亡。由于其功能,该蛋白称为ADP-英文术语adenovirus death protein-(Tollefson,J.Virology,70, 2296-2306,1996)。该蛋白主要在感染周期的晚期形成。而且,蛋白的过量表达导致感染细胞的更好裂解(Doronin等,J.Virology,74,6147-6155,2000)。 Another important region for replication, especially for the release of adenoviruses, is the E3 region. The E3 region more specifically contains the genetic information for a number of relatively small proteins that are not required for the adenovirus infection cycle in vitro (ie in cell culture). However, they play an important role in the survival of the virus during acute and/or latent infection in vivo, as they have, inter alia, immunomodulatory and apoptotic functions (Marshall S. Horwitz, Virololgie, 279, 1-8, 2001; Russell, supra arts). It could be demonstrated that a protein with a size of about 11.6 kDa induces cell death. Due to its function, this protein is called ADP - the English term adenovirus death protein - (Tollefson, J. Virology, 70, 2296-2306, 1996). This protein is mainly formed late in the infection cycle. Furthermore, overexpression of the protein leads to better lysis of infected cells (Doronin et al., J. Virology, 74, 6147-6155, 2000). the
而且,本发明的发明人已知缺失E1A的病毒,即具体地不表达任何12S E1A蛋白和也不表达任何13S E1A蛋白的那些病毒,它们可以在较高MOI下非常高效的复制(Nevins J.R.,Cell 26,213-220,1981),然而其不能在临床应用中实现。该现象在文献中称为“类E1A活性”。还已知从E1A编码的5个蛋白中,两个蛋白,即12S和13S蛋白,分别控制和诱导其它腺病毒基因的表达(Nevins,J.R.,Cell 26,213-220,1981;Boulanger,P.和Blair,E.;Biochem.J.275,281-299,1991)。这证实了,13S蛋白的CR3区域具体地显示反式激活功能(Wong HK和Ziff EB.,J Virol.,68,4910-20,1994)。然而,在13S蛋白的CR1和/或CR2区域和/或CR3区域具有特定缺失的腺病毒基本上是复制缺陷型,在其它细胞系中仍反式激活病毒基因和启动子,特别是E2区域(Wong HK,Ziff EB.,J Virol.68,4910-20,1994;Mymryk,J.S.和Bayley,S.T.,Virus Research 33,89-97,1994)。 Furthermore, the inventors of the present invention have known that E1A-deficient viruses, specifically those that do not express any 12S E1A protein and also do not express any 13S E1A protein, can replicate very efficiently at higher MOIs (Nevins J.R., Cell 26, 213-220, 1981), however it cannot be realized in clinical application. This phenomenon is referred to in the literature as "E1A-like activity". It is also known that from the 5 proteins encoded by E1A, two proteins, namely 12S and 13S proteins, control and induce the expression of other adenovirus genes respectively (Nevins, J.R., Cell 26, 213-220, 1981; Boulanger, P. and Blair, E.; Biochem. J. 275, 281-299, 1991). This confirmed that the CR3 region of the 13S protein specifically displays a transactivation function (Wong HK and Ziff EB., J Virol., 68, 4910-20, 1994). However, adenoviruses with specific deletions in the CR1 and/or CR2 regions and/or CR3 regions of the 13S protein are essentially replication-defective and still transactivate viral genes and promoters, especially the E2 region ( Wong HK, Ziff EB., J Virol. 68, 4910-20, 1994; Mymryk, J.S. and Bayley, S.T., Virus Research 33, 89-97, 1994). the
在使用野生型腺病毒感染细胞、典型地肿瘤细胞以后,通过E1A、E1B-55K和E4orf6将YB-1导入核内,在核内与E1B-55K共定位于病毒包涵体,其允许病毒体外地和体内地在细胞核内有效复制。先前已经发现,E4orf6也能结合E1B-55K(Weigel,S.和Dobbelstein,M.J.Virology,74,764-772,2000;Keith N.Leppard,Seminars in Virology,8,301-307,1998),并因此分别介导E1B-55K转运和分配到核内,其确保最佳的病毒生产和腺病毒复制。分别通过E1A、E1B-55K和YB-1的协同作用、通过由E1B-55K/E4orf6和YB-1组成的复合体,在核内YB-1和E1B-55K在所谓的病毒包涵体的共定位,根据本发明的病毒的有效复制是可能的,因此本文所述病毒用于在细胞中复制,所述细胞是YB-1核-阳性的,优选在独立于细胞周期的核中含有YB-1的细胞,和/或含有或表现去调节的YB-1的细胞,和/或制备药物,用于治疗疾病,其中涉及YB-1核-阳性的细胞,优选在独立于细胞周期的核中含有YB-1的细胞,和/或含有或表现去调节的YB-1的细胞。因此,复制在该细胞背景中是可能的,导致细胞的裂解、病毒的释放和相邻细胞的感染和裂解,因此在分别感染肿瘤细胞和肿瘤的 情形中,肿瘤最终裂解,即发生溶癌作用。 After infection of cells, typically tumor cells, with wild-type adenovirus, YB-1 is introduced into the nucleus by E1A, E1B-55K, and E4orf6, where it colocalizes with E1B-55K in viral inclusion bodies, which allows the virus to and replicate efficiently in the nucleus in vivo. It has been previously found that E4orf6 can also bind E1B-55K (Weigel, S. and Dobbelstein, M.J. Virology, 74, 764-772, 2000; Keith N. Leppard, Seminars in Virology, 8, 301-307, 1998), and thus Mediates the translocation and distribution of E1B-55K into the nucleus, respectively, which ensures optimal virus production and adenovirus replication. Co-localization of YB-1 and E1B-55K in the so-called viral inclusion bodies in the nucleus through the synergy of E1A, E1B-55K and YB-1, respectively, and through a complex composed of E1B-55K/E4orf6 and YB-1 , efficient replication of the virus according to the invention is possible, thus the virus described herein is intended for replication in cells which are YB-1 nuclear-positive, preferably containing YB-1 in the nucleus independent of the cell cycle cells, and/or cells containing or expressing deregulated YB-1, and/or for the preparation of a medicament for the treatment of diseases in which YB-1 nuclear-positive cells are involved, preferably containing in a nucleus independent of the cell cycle YB-1 cells, and/or cells containing or expressing deregulated YB-1. Replication is therefore possible in this cellular context, leading to lysis of the cell, release of the virus and infection and lysis of adjacent cells, thus in the case of infection of tumor cells and tumors respectively, the eventual lysis of the tumor, i.e. oncolysis . the
YB-1属于高度保守因子的类别,其结合反向CAAT序列,其称为Y-盒。它们可以以调节的方式在转录以及翻译水平上起作用(Wolffe,A.P.Trends in Cell Biology 8,318-323,1998)。在生长和细胞凋亡相关基因的激活和抑制中发现了越来越多的Y-盒依赖性的调节途径(Swamynathan,S.K.等,FASEB J.12,515-522,1998)。例如,YB-1直接与p53相互作用(Okamoto,T.等,Oncogene 19,6194-6202,2000),在Fas基因表达(Lasham,A.等,Gene 252,1-13,2000)、在MDR和MRP的基因表达(Stein,U.等,JBC276,28562-69,2001;Bargou,R.C.等,Nature Medicine 3,447-450,1997)和在拓扑异构酶和金属蛋白酶的激活(Mertens.P.R.等,JBC 272,22905-22912,1997;Shibao,K.等,Int.J.Cancer 83,732-737,1999)中起实质作用。另外,YB-1还参与调节mRNA稳定性(Chen,C-Y.等,Genes&Development 14,1236-1248,2000)和修复过程(Ohga,T.等,Cancer Res.56,4224-4228,1996;Izumi H.等,Nucleic Acid Research 2001,29,1200-1 207;IseT.等,Cancer Res.,1999,59,342-346)。
YB-1 belongs to a class of highly conserved factors that bind an inverted CAAT sequence, which is called the Y-box. They can act in a regulated manner at the level of transcription as well as translation (Wolffe, A.P. Trends in Cell Biology 8, 318-323, 1998). An increasing number of Y-box-dependent regulatory pathways have been found in the activation and repression of growth and apoptosis-related genes (Swamynathan, S.K. et al., FASEB J. 12, 515-522, 1998). For example, YB-1 directly interacts with p53 (Okamoto, T. et al., Oncogene 19, 6194-6202, 2000), in Fas gene expression (Lasham, A. et al., Gene 252, 1-13, 2000), in MDR and MRP gene expression (Stein, U. et al., JBC276, 28562-69, 2001; Bargou, R.C. et al.,
通过存在于独立于细胞周期的核中的YB-1,或通过已经由I组腺病毒和/或II组腺病毒转移到核中的存在于细胞质中的去调节的YB-1,YB-1在肿瘤细胞的核中定位,导致在不表达和使用任何12S E1A蛋白或任何13S E1A蛋白过程中独立于E1A的病毒复制(Holm,P.S.等JBC 277,10427-10434,2002),并在蛋白YB-1过量表达的情形中导致多药抗性。另外,已知腺病毒蛋白例如E4orf6和E1B-55K对病毒复制具有积极作用(Goodrum,F.D.和Ornelles,D.A,J.Virology 73,7474-7488,1999),其中功能E1A蛋白负责活化其它病毒基因产物(如E4orf6,E3ADP和E1B-55K)(Nevins J.R.,Cell 26,213-220,1981)。然而,这对于现有技术已知的E1A-阴性的腺病毒不发生,在该腺病毒中不存在13S E1A蛋白。YB-1在核内含有YB-1的多药抗性的细胞中的核定位分别允许该E1A-阴性病毒的复制和颗粒形成。然而在该情形中,与野生型Ad5相比,病毒复制和颗粒形成的效率减少数倍。与此相比,YB-1的组合允许YB-1介导的极有效的病毒复制和颗粒形成,并因此提供溶癌作用,其中YB-1已经存在于肿瘤细胞的核内,其可能来自位于独立于细胞周期的核内的YB-1,或者其 中存在于细胞质中的去调节的YB-1由I组腺病毒和/或II组腺病毒转移到核中,或者通过外部因素(例如施用细胞生长抑制剂或辐照或过热)引入细胞核,即诱导存在于核中,特别是独立于细胞周期,或者作为转基因通过载体用系统、优选腺病毒系统导入,该腺病毒系统能启动腺病毒基因但不表现出病毒复制。这也适用于根据本发明的腺病毒,即因为它们的特异性的设计而能够有效地复制的I组腺病毒,并且使用效果,即E1B蛋白、优选E1B55K蛋白和/或E4蛋白、优选地E4orf6蛋白提供YB-1,优选地在核中的有效动员。根据本发明的各个方面,可以与本文公开的腺病毒一起使用的合适的细胞生长抑制剂是,例如属于下述组的那些:蒽环霉素,如道诺霉素和多柔比星;烷化剂,如环磷酰胺;生物碱类,如依托泊苷;长春花-生物碱类,如长春新碱和长春碱;抗代谢药如5-氟尿嘧啶和甲氨蝶呤(methrothrexat);铂衍生物,例如顺铂;拓扑异构酶抑制剂,如camphothecine,CPT-11;紫杉烷类,例如紫杉酚(taxole)、紫杉醇(paclitaxel);组蛋白-脱乙酰酶抑制剂,例如FR901228,MS-27-275,trichostatine A;MDR调控剂,例如MS-209,VX-710,和格尔德霉素衍生物,例如17-AAG。本文公开的腺病毒、特别是重组腺病毒,仅能够在YB-1核-阳性的细胞中和在含有、优选地在细胞质中含有去调节的YB-1的细胞中复制,与野生型腺病毒、特别是野生型Ad5相应的反式激活能力相比,它们在反式激活病毒基因E1B-55K,E4orf6,E4orf3和E3ADP的能力方面有限。本发明的发明人现在意外地发现,这些有限的反式激活能力可以通过表达相应的基因、特别是E1B-55K和E4orf6并结合YB-1的核定位来克服。如本文实施例所示,在该条件下的病毒复制和颗粒形成分别增加至可与野生型腺病毒的复制活性和颗粒形成活性相比的水平。 By YB-1 present in the nucleus independent of the cell cycle, or by deregulated YB-1 present in the cytoplasm that has been translocated into the nucleus by group I adenoviruses and/or group II adenoviruses, YB-1 Localizes in the nucleus of tumor cells, leading to E1A-independent viral replication in the absence and use of any 12S E1A protein or any 13S E1A protein (Holm, P.S. et al. JBC 277, 10427-10434, 2002), and in protein YB -1 overexpression results in multidrug resistance. In addition, adenoviral proteins such as E4orf6 and E1B-55K are known to have positive effects on viral replication (Goodrum, F.D. and Ornelles, D.A, J. Virology 73, 7474-7488, 1999), where the functional E1A protein is responsible for the activation of other viral gene products (such as E4orf6, E3ADP and E1B-55K) (Nevins J.R., Cell 26, 213-220, 1981). However, this does not occur with E1A-negative adenoviruses known in the art, in which the 13S E1A protein is absent. Nuclear localization of YB-1 in multidrug-resistant cells containing YB-1 in the nucleus allows replication and particle formation, respectively, of the E1A-negative virus. In this case, however, the efficiency of viral replication and particle formation was reduced several-fold compared to wild-type Ad5. In contrast, the combination of YB-1 allows YB-1-mediated extremely efficient viral replication and particle formation, and thus provides oncolysis, where YB-1 is already present in the nucleus of tumor cells, probably from Cell cycle-independent YB-1 in the nucleus, or where deregulated YB-1 present in the cytoplasm is transferred into the nucleus by group I adenoviruses and/or group II adenoviruses, or by external factors such as administration of Cytostatics or irradiation or overheating) into the nucleus, i.e. induced to exist in the nucleus, especially independent of the cell cycle, or as a transgene introduced by a vector with a system, preferably an adenovirus system, which can activate the adenovirus gene But does not show viral replication. This also applies to adenoviruses according to the invention, i.e. group I adenoviruses capable of replicating efficiently due to their specific design, and using effects, i.e. E1B protein, preferably E1B55K protein and/or E4 protein, preferably E4orf6 The protein provides efficient mobilization of YB-1, preferably in the nucleus. Suitable cytostatic agents that may be used with the adenoviruses disclosed herein according to various aspects of the invention are, for example, those belonging to the following group: anthracyclines, such as daunomycin and doxorubicin; Alkaloids such as cyclophosphamide; alkaloids such as etoposide; vinca-alkaloids such as vincristine and vinblastine; antimetabolites such as 5-fluorouracil and methotrexate; platinum derivatives substances, such as cisplatin; topoisomerase inhibitors, such as camphothecine, CPT-11; taxanes, such as taxol (taxole), paclitaxel (paclitaxel); histone-deacetylase inhibitors, such as FR901228, MS-27-275, trichostatine A; MDR modulators, such as MS-209, VX-710, and geldanamycin derivatives, such as 17-AAG. The adenoviruses disclosed herein, particularly recombinant adenoviruses, are capable of replicating only in YB-1 nuclear-positive cells and in cells containing, preferably deregulated, YB-1 in the cytoplasm, unlike wild-type adenoviruses. , especially wild-type Ad5, are limited in their ability to transactivate the viral genes E1B-55K, E4orf6, E4orf3 and E3ADP. The inventors of the present invention have now surprisingly found that these limited transactivation capacities can be overcome by expressing the corresponding genes, in particular E1B-55K and E4orf6, combined with the nuclear localization of YB-1. As shown in the Examples herein, virus replication and particle formation under these conditions increased to levels comparable to the replication activity and particle formation activity of wild-type adenovirus, respectively. the
根据本发明使用与本文所述的腺病毒相关的或制备其的药物,意欲通常全身施用,尽管局部施用或传递该药物也在本发明范围内。该应用意欲特别地用腺病毒感染那些细胞,并且意欲在其中特别发生腺病毒的复制,其优选地以因果的方式参与病症、典型地疾病的形成,为了诊断和/或预防和/或治疗它们,使用了根据本发明的药物。 Use according to the present invention of medicaments related to or prepared from the adenoviruses described herein is intended to be generally administered systemically, although topical administration or delivery of such medicaments is also within the scope of the invention. The use is intended in particular to infect those cells with adenoviruses, and in particular in which the replication of adenoviruses takes place, which preferably participates in a causal manner in the formation of disorders, typically diseases, for the diagnosis and/or prophylaxis and/or treatment of them , using a medicament according to the invention. the
这种药物优选用于治疗:恶性病、肿瘤病、癌性病、癌症和肿瘤,其中如果没有相反说明,这些术语在本文中以实质上同义的方式使用。肿瘤 病优选地是:其中肿瘤病的机制、特别是由于病理学机制导致YB-1已经定位于核内、优选地独立于细胞周期,或者其中由于外源措施导致YB-1存在于细胞核内,其中所述的外源措施适于将YB-1转移至细胞核内,或在那里诱导或表达YB-1。本文所用的术语肿瘤或肿瘤病应当包含恶性以及良性的肿瘤、实体瘤和扩散瘤、以及各种疾病。在一个实施方案中,该药物包含至少一种其它的药物活性化合物。这种其它的药物活性化合物的性质和数量将取决于药物使用的适应症的种类。在药物用于治疗和/或预防肿瘤病的情形中,典型地使用细胞生长抑制剂,例如顺铂和紫杉酚,daunoblastin,柔红霉素(daunorubicin),多柔比星和/或米托蒽醌或本文所述的其它细胞生长抑制剂或细胞生长抑制剂组,优选如关于细胞生长抑制剂介导的YB-1的核定位所述的那些。 Such medicaments are preferably used in the treatment of: malignancies, neoplastic diseases, cancerous venereal diseases, cancer and tumors, wherein these terms are used herein in a substantially synonymous manner if not stated to the contrary. The neoplastic disease is preferably: wherein the mechanism of the neoplastic disease, in particular due to a pathological mechanism, has resulted in YB-1 being localized in the nucleus, preferably independently of the cell cycle, or wherein YB-1 is present in the nucleus due to exogenous measures, The exogenous means described therein are suitable for transferring YB-1 into the nucleus, or inducing or expressing YB-1 there. The term tumor or neoplastic disease as used herein shall encompass malignant as well as benign tumors, solid and diffuse tumors, and various diseases. In one embodiment, the medicament comprises at least one other pharmaceutically active compound. The nature and amount of such other pharmaceutically active compounds will depend on the type of indication for which the drug is used. In the case of drugs for the treatment and/or prophylaxis of neoplastic diseases, cytostatic agents such as cisplatin and paclitaxel, daunoblastin, daunorubicin, doxorubicin and/or mitol are typically used Anthraquinones or other cytostatics or groups of cytostatics as described herein, preferably as described for cytostatic-mediated nuclear localization of YB-1. the
根据本发明的药物可以以各种制剂存在,优选液体形式。而且,药物将包含佐剂,例如稳定剂、缓冲剂、防腐剂和制剂领域技术人员已知的那些。 The medicament according to the invention may be present in various formulations, preferably in liquid form. Furthermore, the medicament will contain adjuvants such as stabilizers, buffers, preservatives and those known to those skilled in the art of formulation. the
本发明的发明人已经意外地发现,本文所述的病毒、优选I组腺病毒和/或II组腺病毒根据本发明的应用可以以非常高的成功率应用于肿瘤,它们可以用于生产治疗该肿瘤的药物,所述肿瘤在独立于细胞周期的核内含有YB-1。通常,YB-1位于细胞质中,特别是存在核周胞质中。在细胞周期的G1/S-期,在正常细胞以及肿瘤细胞的细胞核中都可以发现YB-1,其中部分YB-1残留在细胞质中[Jürchott K等,JBC 2003,278,27988-27996]。然而,使用这样修饰的腺病毒还不足以提供病毒的溶癌作用。现有技术中所述的这种减毒腺病毒的相对低功效最终是由于它们的错误应用。换句话说,当如本文所述使用这些减毒或修饰的病毒,优选使用I组腺病毒和/或II组腺病毒,提供病毒溶癌作用的分子生物学先决条件时,可以以更高功效特别使用这些腺病毒系统。当要根据本发明使用本文所述的腺病毒时,如AdΔ24,dl922-947,E1Ad/01/07,CB016,dl520和在欧洲专利EP 0 931 830中描述的重组腺病毒,在下述的肿瘤中提供先决条件:其细胞显示出YB-1的独立于细胞周期的核定位。这种形式的核定位可以是由肿瘤自身的性质导致,或可以是由本文公开的根据本发明的措施或本发明的试剂导致。本发明因此定义了一组新的肿瘤和肿瘤病,因此也定义 了一组患者,其可以被使用根据本发明的病毒、如优选I组腺病毒和/或II组腺病毒、但是也使用现有技术中已经描述的减毒或修饰的腺病毒而成功地治疗。 The inventors of the present invention have surprisingly found that the use of the viruses described herein, preferably group I adenoviruses and/or group II adenoviruses according to the invention can be applied to tumors with a very high success rate, they can be used to produce therapeutic Drugs for tumors that contain YB-1 in the nucleus independent of the cell cycle. Usually, YB-1 is located in the cytoplasm, especially in the perinuclear cytoplasm. In the G1/S-phase of the cell cycle, YB-1 can be found in the nucleus of normal cells and tumor cells, and part of YB-1 remains in the cytoplasm [Jürchott K et al., JBC 2003, 278, 27988-27996]. However, the use of such modified adenoviruses is not sufficient to provide viral oncolysis. The relatively low efficacy of such attenuated adenoviruses described in the prior art is ultimately due to their misapplication. In other words, when these attenuated or modified viruses are used as described herein, preferably using group I adenoviruses and/or group II adenoviruses, to provide the molecular biological prerequisites for viral oncolysis, they can be treated with higher efficacy. These adenoviral systems are used in particular. When the adenoviruses described herein are to be used according to the present invention, such as AdΔ24, dl922-947, E1Ad/01/07, CB016, dl520 and recombinant adenoviruses described in European patent EP 0 931 830, in the following tumors Provides a prerequisite: its cells display a cell cycle-independent nuclear localization of YB-1. This form of nuclear localization may be caused by the nature of the tumor itself, or may be caused by the measures according to the invention disclosed herein or by the agents of the invention. The present invention thus defines a new group of neoplasms and neoplastic diseases, and thus also a group of patients, which can be treated with viruses according to the invention, such as preferably group I adenoviruses and/or group II adenoviruses, but also with existing Successful treatment with attenuated or modified adenoviruses has been described in the art. the
另一组患者是确保通过施加或实现具体条件使YB-1迁移到核内或引入或转移到其中、或其中存在去调节的YB-1的那些患者,其可以根据本发明使用I组腺病毒和/或II组腺病毒,或例如现有技术已知的并要根据本发明使用的腺病毒,或者使用在本文中第一次描述的腺病毒,优选使用分别在E1A蛋白中具有突变和缺失的这些腺病毒,其不干扰Rb/E2f的结合或其不在YB-1核-阴性的细胞中复制,或者显示出显著减少的如本文定义的复制,和/或具有和/或表现出缺失的癌蛋白,特别是E1A,例如在病毒AdΔ24,dl922-947,E1Ad/01/07,CB106和在欧洲专利EP 0 931 830中描述的腺病毒的情况中。与这组患者相关的I组腺病毒和/或II组腺病毒的应用是基于发现,即病毒复制的诱导是基于YB-1的核定位,随后YB-1与E2-晚期启动子结合。由于本文公开的发现,腺病毒如AdΔ24,dl922-947,E1Ad/01/07,CB106和/或欧洲专利EP 0 931 830描述的腺病毒也可以在下述细胞中复制:YB-1核-阳性的,和/或YB-1在其中以本发明所定义去调节的方式存在的细胞。因此,这些腺病毒可以用于治疗根据本发明疾病和患者组,其包含具有这些特征的细胞,特别是当这些细胞参与要治疗的各种疾病的形成时。这是AdΔ24,dl922-947,E1Ad/01/07,CB016和在专利EP0 931 830中描述的腺病毒以及I组腺病毒和/或II组腺病毒的根据本发明治疗这些肿瘤的成功基础,这些肿瘤在独立于细胞周期的核内含有YB-1,或者含有本公开内容意义上的去调节的YB-1。可以根据本发明使用本文描述的可按本发明使用的病毒和使用在本文中第一次描述的病毒、特别是I组腺病毒和/或II组腺病毒治疗依照本发明治疗的另一组患者是YB-1核-阳性的患者,和/或因为下列所述治疗导致YB-1核-阳性的患者,和/或将经历一种下述措施、优选在治疗意义上,在施用腺病毒之前、伴随使用各腺病毒或施用腺病毒之后的患者。本发明包括,YB-1核-阳性患者是在许多独立于细胞周期的形成肿瘤的细胞的核内含有YB-1、和/或在这样的细胞中含有去调节的YB-1的患者。这些措施中的一种是,作为整体和/或如在肿瘤治疗中所用的那样施用如本文所述的细胞生长抑制剂。另外,辐照、 特别是在肿瘤治疗中所用的辐照属于这类措施。辐照特别是指使用高能辐射的辐照,优选放射性辐射,优选如在肿瘤治疗中所用。其它措施分别是过热和应用过热,优选在肿瘤治疗中使用的过热。在特别优选的实施方案中,局部施加过热。最后,其它措施是激素治疗,特别是如在肿瘤治疗中使用的激素治疗。在这样的激素治疗的过程中,使用抗-雌激素剂和抗-雄激素剂。与其相关,抗雌激素例如他莫昔芬,特别地用在乳腺癌的治疗中,和抗雄激素例如氟他胺或醋酸环丙孕酮,特别地用在前列腺癌的治疗中。 Another group of patients are those in whom YB-1 is ensured to migrate into the nucleus or to be introduced or transferred into it by imposing or achieving specific conditions, or where deregulated YB-1 is present, for which group I adenoviruses can be used according to the invention and/or adenoviruses of group II, or adenoviruses known for example from the prior art and to be used according to the invention, or adenoviruses described for the first time in this text, preferably with mutations and deletions respectively in the E1A protein Those adenoviruses which do not interfere with the binding of Rb/E2f or which do not replicate in YB-1 nuclear-negative cells, or exhibit significantly reduced replication as defined herein, and/or have and/or exhibit a deletion Oncoproteins, especially E1A, for example in the case of the viruses AdΔ24, d1922-947, E1Ad/01/07, CB106 and the adenoviruses described in European patent EP 0 931 830. The use of group I and/or group II adenoviruses in relation to this group of patients is based on the discovery that the induction of viral replication is based on the nuclear localization of YB-1 and subsequent binding of YB-1 to the E2-late promoter. Thanks to the findings disclosed herein, adenoviruses such as AdΔ24, dl922-947, E1Ad/01/07, CB106 and/or the adenoviruses described in European patent EP 0 931 830 can also replicate in the following cells: YB-1 nuclear-positive , and/or a cell in which YB-1 is present in a deregulated manner as defined in the present invention. These adenoviruses can therefore be used in the treatment of diseases and groups of patients according to the invention comprising cells with these characteristics, especially when these cells are involved in the development of the various diseases to be treated. This is the basis for the successful treatment of these tumors according to the invention of AdΔ24, dl922-947, E1Ad/01/07, CB016 and the adenoviruses described in patent EP0 931 830, as well as group I adenoviruses and/or group II adenoviruses, which The tumor contains YB-1 in the nucleus independent of the cell cycle, or deregulated YB-1 in the sense of the present disclosure. Another group of patients treated according to the invention can be treated according to the invention with the viruses described herein which can be used according to the invention and with the viruses described for the first time herein, in particular group I adenoviruses and/or group II adenoviruses Patients who are YB-1 nuclear-positive, and/or who become YB-1 nuclear-positive due to the treatment described below, and/or will undergo one of the following measures, preferably in a therapeutic sense, prior to the administration of adenovirus , patients following the use of each adenovirus or after administration of the adenovirus. Included in the present invention is a YB-1 nuclear-positive patient who has YB-1 in the nucleus of many tumor-forming cells independent of the cell cycle, and/or has deregulated YB-1 in such cells. One of these measures is the administration of a cytostatic agent as described herein as a whole and/or as used in tumor therapy. In addition, irradiation, especially that used in the treatment of tumors, falls under this category of measures. Irradiation refers in particular to irradiation with high-energy radiation, preferably radioactive radiation, preferably as used in tumor therapy. Further measures are respectively overheating and applied overheating, preferably overheating used in tumor therapy. In a particularly preferred embodiment, superheat is applied locally. Finally, a further measure is hormone therapy, in particular as used in tumor therapy. During such hormone therapy, anti-estrogens and anti-androgens are used. In relation thereto, antiestrogens such as tamoxifen are used in particular in the treatment of breast cancer, and antiandrogens such as flutamide or cyproterone acetate are used in particular in the treatment of prostate cancer. the
本文所述的腺病毒还可以用于治疗肿瘤,其中所述的肿瘤选自包含原发性肿瘤、次发性肿瘤、 第三级肿瘤和转移性肿瘤的组。与此相关,肿瘤优选地表现出至少一个下述特征,即它们的独立于细胞周期的核中具有YB-1,无论其原因如何,和/或它们含有去调节的YB-1。 The adenoviruses described herein can also be used to treat tumors selected from the group comprising primary tumors, secondary tumors, tertiary tumors and metastatic tumors. In this connection, tumors preferably exhibit at least one feature that they have YB-1 in their cell cycle-independent nuclei, whatever the cause, and/or that they contain deregulated YB-1. the
本发明包括,细胞和肿瘤分别包含这样的细胞,根据本发明的腺病毒在其中复制,或者能在其中复制,所述细胞或肿瘤具有本文所述的一个或多个特征,更具体的特征是,它们在独立于细胞周期的核中含有YB-1,无论其原因如何,和/或它们含有去调节的YB-1的特征,并且这些细胞和肿瘤分别可以使用根据本发明的I组腺病毒和/或II组腺病毒进行治疗,并且所述的腺病毒可以用于生产治疗它们的药物,其中所述的腺病毒能表达编码YB-1的核酸。因此,优选地有3种类型的细胞和因之的肿瘤,根据本发明的I组腺病毒和/或II组腺病毒可以在其中复制,并且使用这些腺病毒可以分别治疗,优选裂解它们: The present invention includes that cells and tumors respectively comprise such cells in which the adenovirus according to the present invention replicates, or are capable of replicating, said cells or tumors have one or more of the characteristics described herein, more specifically , which contain YB-1 in the nucleus independent of the cell cycle, regardless of the cause, and/or which feature deregulated YB-1, and these cells and tumors, respectively, can be treated with adenovirus group I according to the invention and/or group II adenovirus for treatment, and said adenovirus can be used to produce medicines for treating them, wherein said adenovirus can express nucleic acid encoding YB-1. Thus, preferably there are 3 types of cells and thus tumors in which the adenoviruses of group I and/or group II according to the invention can replicate and with which they can be treated, preferably lysed, respectively:
A组:在独立于细胞周期的核中含有YB-1的细胞; Panel A: cells containing YB-1 in the nucleus independent of the cell cycle;
B组:在核中、特别是非独立于细胞周期的核中不含有YB-1,但是含有去调节的YB-1的细胞;和 Panel B: cells that do not contain YB-1 in nuclei, especially those that are not cell cycle independent, but contain deregulated YB-1; and
C组:在核中、特别是非独立于细胞周期的核中不含有YB-1,并且不含有去调节的YB-1的细胞。 Panel C: cells that do not contain YB-1 in nuclei, especially cell cycle-independent nuclei, and do not contain deregulated YB-1. the
对于A组细胞,不表达其它YB-1的根据本发明的腺病毒、特别是I组腺病毒,可以用于复制或裂解。但是,表达其它YB-1的根据本发明的这类腺病毒、特别是I组腺病毒,也可以用于复制或裂解。这也适用于B组。希望不受此限制,其原因好像是,由于E1B蛋白、具体的E1B55K蛋白和/或E4蛋白、具体的E4orf6蛋白的作用,通过YB-1在核中的定位 和向该核中的转移YB-1分别确保了有效的复制。腺病毒另外表达的YB-1支持了该过程。 For group A cells, adenoviruses according to the invention, in particular group I adenoviruses expressing no other YB-1, can be used for replication or lysis. However, such adenoviruses according to the invention expressing other YB-1, in particular group I adenoviruses, can also be used for replication or lysis. This also applies to Group B. Without wishing to be limited thereto, the reason seems to be that, through the localization of YB-1 in the nucleus and the transfer of YB- 1 respectively ensures efficient replication. This process is supported by the additional expression of YB-1 by adenovirus. the
在C组的情况下,优选地,根据本发明的那些腺病毒、特别是I组腺病毒将用于复制或裂解,它们另外表达YB-1。其原因似乎是,仍然希望不受此限制,上述的病毒复制过程在特定的细胞背景中没有被活化,以致可以发生有效的复制。仅仅分别通过提供YB-1和表达YB-1,就会发生有效的复制,其中的机制似乎是这样的,YB-1的过量表达导致YB-1的核定位,如也记载在Bargou[Bargout R.C.等,Nature Medicine 1997,3,447-450]和Jürchott[Jürchott K.等,JBC 2003,278,27988-27966]中。
In the case of group C, preferably those adenoviruses according to the invention, in particular group I adenoviruses will be used for replication or lysis, which additionally express YB-1. The reason for this seems to be, still wishing not to be limited, that the above-mentioned viral replication process is not activated in a specific cellular context so that efficient replication can take place. The mechanism by which efficient replication occurs simply by providing YB-1 and expressing YB-1, respectively, appears to be such that overexpression of YB-1 leads to nuclear localization of YB-1, as also described in Bargou [Bargout R.C. et al.,
本发明包括,一些形成肿瘤的细胞本身在核中含有YB-1或这样做或在诱导和活化导入核中以后含有YB-1,或包含本公开内容意义上的去调节的YB-1。优选地,约5%或任何比其更大的百分比(即6%,7%,8%等)的肿瘤形成细胞是这种YB-1核-阳性的细胞,或其中存在去调节的YB-1的细胞。对于其它肿瘤,例如乳腺瘤、骨肉瘤、卵巢癌、关节癌或肺癌,含有去调节的YB-1或者表现出独立于细胞周期的YB-1核定位的肿瘤细胞的百分比可以是约30~50%[Kohno K.等,BioEssays 2003,25,691-698]。这样的肿瘤可以优选地使用根据本发明的腺病毒治疗。分别通过外部胁迫和通过局部施加胁迫可以诱导YB-1的核定位。这种诱导可以例如通过辐照、特别是UV辐照,施用如尤其已经在本文中公开的细胞生长抑制剂,和过热来发生。关于过热,重要的是现在可以以非常特定的方式、更具体以局部的方式实现,因此还可以造成YB-1在核内的特定的核转运,因此,提供了腺病毒复制和因此细胞和肿瘤裂解的先决条件,其优选地是局部限制的(Stein U,Jurchott K,Walther W,Bergmann S,Schlag PM,Royer HD.J Biol Chem.2001,276(30):28562-9;Hu Z,Jin S,Scotto KW.JBiol Chem.2000 Jan 28;275(4):2979-85;Ohga T,Uchiumi T,Makino Y,Koike K,Wada M,Kuwano M,Kohno K.J Biol Chem.1998,273(11):5997-6000)。 The invention includes that some tumor-forming cells themselves contain YB-1 in the nucleus or do so or after induction and activation have been introduced into the nucleus, or contain deregulated YB-1 in the sense of this disclosure. Preferably, about 5% or any greater percentage (i.e. 6%, 7%, 8%, etc.) of tumor-forming cells are such YB-1 nuclear-positive cells, or in which deregulated YB-1 is present. 1 cell. For other tumors, such as breast tumors, osteosarcomas, ovarian cancers, joint cancers, or lung cancers, the percentage of tumor cells that contain deregulated YB-1 or exhibit cell cycle-independent YB-1 nuclear localization can be about 30-50 % [Kohno K. et al., BioEssays 2003, 25, 691-698]. Such tumors can preferably be treated using the adenovirus according to the invention. The nuclear localization of YB-1 can be induced by external stress and by locally applied stress, respectively. This induction can take place, for example, by irradiation, especially UV irradiation, application of cytostatic agents as already disclosed herein, and overheating. The important thing about hyperthermia is that it can now be achieved in a very specific way, more specifically in a localized way, and thus also cause a specific nuclear translocation of YB-1 in the nucleus, thus, providing adenoviral replication and thus cells and tumors A prerequisite for cleavage, which is preferably locally restricted (Stein U, Jurchott K, Walther W, Bergmann S, Schlag PM, Royer HD. J Biol Chem. 2001, 276(30): 28562-9; Hu Z, Jin S, Scotto KW. J Biol Chem. 2000 Jan 28; 275(4): 2979-85; Ohga T, Uchiumi T, Makino Y, Koike K, Wada M, Kuwano M, Kohno K. J Biol Chem. 1998, 273(11) : 5997-6000). the
本发明的药物因此也可以施用于患者和患者组,或可以为他们设计,其中通过适当的治疗前或治疗后或伴随治疗分别实现YB-1的转运,特别地在各种肿瘤细胞中的转运,并在细胞中生成去调节的YB-1。 The medicaments according to the invention can therefore also be administered to patients and groups of patients, or can be designed for them, in which the transport of YB-1, in particular in various tumor cells, is achieved by appropriate pre- or post-treatment or concomitant treatment, respectively , and produce deregulated YB-1 in cells. the
基于本文提供的该技术教导,本领域技术人员在其技术范围内进行适当的改进,特别是对E1A,例如其可以包含产生缺失或点突变以便因此产生腺病毒的各种实施方案,其可以在根据本发明的应用中使用。 Based on the technical teaching provided herein, those skilled in the art are within the scope of their skill to make appropriate modifications, in particular to E1A, for example, which may include various embodiments for the generation of deletions or point mutations to thereby generate adenoviruses, which may be found in used in applications according to the invention. the
如以上已经解释的,I组腺病毒和/或II组腺病毒能够在核中含有YB-1的这些细胞和细胞系统中复制。关于根据本发明使用的腺病毒是否能够复制和因此能够裂解肿瘤的问题,含有或不含Rb(即成视网膜细胞瘤抑制剂产物)的细胞的状态是不相关的。另外,关于所述腺病毒根据本发明的应用,当使用本文公开的与YB-1核-阳性的细胞(即在独立于细胞周期的核内含有YB-1的细胞)有关的腺病毒系统时,不需要考虑感染细胞、待感染细胞或待治疗细胞的p53的状态,该p53状态以及Rb状态对实施本文公开的技术教导的腺病毒的复制无任何影响。 As already explained above, group I adenoviruses and/or group II adenoviruses are able to replicate in these cells and cell systems containing YB-1 in the nucleus. With regard to the question of whether the adenoviruses used according to the invention are capable of replicating and thus lysing tumors, the state of the cells with or without Rb (ie the retinoblastoma inhibitor product) is irrelevant. In addition, regarding the application of the adenovirus according to the present invention, when using the adenovirus system disclosed herein related to YB-1 nucleus-positive cells (i.e., cells containing YB-1 in the nucleus independent of the cell cycle) , need not consider the p53 status of the infected cells, cells to be infected or cells to be treated, the p53 status and the Rb status have no effect on the replication of the adenovirus implementing the technical teachings disclosed herein. the
反式激活的癌基因和癌基因蛋白,特别是E1A,优选II组腺病毒,可以分别在所有天然腺病毒启动子的控制下和/或通过肿瘤特异性的或组织特异性的启动子控制。适当的非腺病毒启动子可以选自包含巨细胞病毒启动子、RSV(劳斯肉瘤病毒)启动子、基于腺病毒的启动子Va I和非病毒的YB-1启动子(Makino Y.等,Nucleic Acids Res.1996,15,1 873-1878)。可以在本文公开的本发明任何方面使用的其它启动子是端粒酶启动子、甲胎蛋白(AFP)启动子、caecinoembryonic抗原启动子(CEA)(Cao,G.,Kuriyama,S.,Gao,J.,Mitoro,A.,Cui,L.,Nakatani,T.,Zhang,X.,Kikukawa,M.,Pan,X.,Fukui,H.,Qi,Z.Int.J.Cancer,78,242-247,1998)、L-丝束蛋白启动子(Chung,I.,Schwartz,PE.,Crystal,RC.,Pizzorno,G,Leavitt,J.,Deisseroth,AB.Cancer Gene Therapy,6,99-106,1999)、精氨酸血管升压素启动子(Coulson,JM,Staley,J.,Woll,PJ.British J.Cancer,80,1935-1944,1999)、E2f启动子(Tsukada等Cancer Res.,62,3428-3477)、uroplakin II启动子(Zhang等,Cancer Res.,62,3743-3750,2002)和PSA启动子(Hallenbeck PL,Chang,YN,Hay,C,Golightly,D.,Stewart,D.,Lin,J.,Phipps,S.,Chiang,YL.HumanGene Therapy,10,1721-1733,1999)、酪氨酸酶启动子(Nettelbeck,DM.Anti-Cancer Drugs,14,577-584,2003),环加氧酶2启动子(Nettelbeck,DM.,Rivera,AA,Davydova,J.,Dieckmann,D.,Yamamoto,M.,Curiel,DT.Melanoma Res.,13,287-292,2003),和诱导系统例如四环素(Xu,XL., Mizuguchi,H.,Mayumi,T.,Hayakawa,T.Gene,309,145-151,2003)。另外,如德国专利申请DE 101 50 984.7所述的腺病毒的YB-1依赖性E2-晚期启动子是可以用于本发明的启动子。
Transactivated oncogenes and oncogene proteins, in particular E1A, preferably group II adenoviruses, respectively, can be under the control of all native adenovirus promoters and/or via tumor-specific or tissue-specific promoters. Suitable non-adenoviral promoters may be selected from the group comprising the cytomegalovirus promoter, the RSV (Rous sarcoma virus) promoter, the adenovirus-based promoter Va I and the non-viral YB-1 promoter (Makino Y. et al., Nucleic Acids Res. 1996, 15, 1 873-1878). Other promoters that may be used in any aspect of the invention disclosed herein are the telomerase promoter, the alpha-fetoprotein (AFP) promoter, the caecinoembryonic antigen promoter (CEA) (Cao, G., Kuriyama, S., Gao, J., Mitoro, A., Cui, L., Nakatani, T., Zhang, X., Kikukawa, M., Pan, X., Fukui, H., Qi, Z. Int. J. Cancer, 78, 242-247,1998), L-plastin promoter (Chung, I., Schwartz, PE., Crystal, RC., Pizzorno, G, Leavitt, J., Deisseroth, AB. Cancer Gene Therapy, 6,99 -106, 1999), arginine vasopressin promoter (Coulson, JM, Staley, J., Woll, PJ.British J.Cancer, 80, 1935-1944, 1999), E2f promoter (Tsukada et al. Cancer Res., 62, 3428-3477), uroplakin II promoter (Zhang et al., Cancer Res., 62, 3743-3750, 2002) and PSA promoter (Hallenbeck PL, Chang, YN, Hay, C, Golightly, D. , Stewart, D., Lin, J., Phipps, S., Chiang, YL.HumanGene Therapy, 10, 1721-1733, 1999), tyrosinase promoter (Nettelbeck, DM.Anti-Cancer Drugs, 14, 577-584, 2003),
已知端粒酶启动子在人类细胞中极其重要。因此,端粒酶活性通过端粒酶逆转录酶基因(hTERT)的转录控制调节,hTERT是酶的催化亚基。端粒酶的表达在85%的人类肿瘤细胞中是活化的。与此相反,它在大多数正常细胞中无活性。生殖细胞和胚胎组织不含有它(Braunstein,I.等,CancerResearch,61,5529-5536,2001;Majumdar,A.S.等,Gene Therapy 8,568-578,2001)。对hTERT启动子更详细的研究已证实,分别远离起始密码子283bp和82bp的启动子的片段足以在肿瘤细胞中特异性表达(Braunstein I.等;Majumdar AS等,上文)。因此,该启动子和特定片段分别适合基因和特别是转基因、优选本文公开的转基因之一在肿瘤细胞中的特异性表达。启动子应当允许修饰的癌基因、优选E1A癌基因蛋白仅在肿瘤细胞中表达。此外,在一个实施方案中,转基因在该腺病毒载体中的表达在这些启动子的控制下,所述转基因优选选自包含E4orf6,E1B55kD,ADP和YB-1的组。本发明还包括,反式激活癌基因蛋白,特别是E1A蛋白的可读框在一个或数个腺病毒系统的基因产物的框架内。然而,反式激活E1A蛋白的可读框也可以是从那里独立的。 The telomerase promoter is known to be extremely important in human cells. Thus, telomerase activity is regulated by the transcriptional control of the telomerase reverse transcriptase gene (hTERT), the catalytic subunit of the enzyme. Expression of telomerase is active in 85% of human tumor cells. In contrast, it is inactive in most normal cells. Germ cells and embryonic tissues do not contain it (Braunstein, I. et al., Cancer Research, 61, 5529-5536, 2001; Majumdar, A.S. et al., Gene Therapy 8, 568-578, 2001). More detailed studies of the hTERT promoter have demonstrated that fragments of the promoter 283 bp and 82 bp away from the start codon, respectively, are sufficient for specific expression in tumor cells (Braunstein I. et al.; Majumdar AS et al., supra). Accordingly, the promoter and the specific fragment are respectively suitable for the specific expression of a gene and in particular a transgene, preferably one of the transgenes disclosed herein, in tumor cells. The promoter should allow expression of the modified oncogene, preferably the E1A oncogene protein, only in tumor cells. Furthermore, in one embodiment, the expression of a transgene in the adenoviral vector is under the control of these promoters, said transgene preferably being selected from the group comprising E4orf6, E1B55kD, ADP and YB-1. The invention also includes that the open reading frame of the transactivating oncogene protein, especially the E1A protein, is within the frame of the gene product of one or several adenoviral systems. However, the open reading frame of the transactivating E1A protein can also be independent from there. the
本发明包括,上述的各种启动子也用于根据本发明的腺病毒、优选I组腺病毒的各个实施方案,特别是在要使用的启动子与在野生型腺病毒中控制各蛋白的表达或表达产物的启动子不同时。前述启动子因而是合适的本发明意义上的异源启动子。在根据本发明的腺病毒、特别是I组腺病毒的优选实施方案中,当将腺病毒应用于上述的A组和B组细胞时,认为E1B蛋白和/或E4蛋白的表达从这样的异源启动子开始,其中优选地但不是排它地,E1A蛋白的表达由YB-1控制。在该实施方案和其它的实施方案中,E1A蛋白的表达在YB-1可控制的启动子的控制下,例如腺病毒2-晚期启动子。当E1B蛋白和/或E4蛋白是在一个表达盒中表达时,这也适用。 The present invention encompasses that the various promoters described above are also used in various embodiments of the adenovirus according to the present invention, preferably group I adenovirus, in particular when the promoter to be used is related to the control of the expression of the respective proteins in the wild-type adenovirus Or when the promoters of the expression products are different. The aforementioned promoters are thus suitable heterologous promoters in the sense of the present invention. In a preferred embodiment of the adenovirus according to the present invention, especially the group I adenovirus, when the adenovirus is applied to the above-mentioned group A and B cells, it is considered that the expression of the E1B protein and/or the E4 protein is derived from such heterogeneous A source promoter wherein preferably, but not exclusively, the expression of the E1A protein is controlled by YB-1. In this and other embodiments, expression of the E1A protein is under the control of a YB-1 controllable promoter, such as the adenovirus 2-late promoter. This also applies when the E1B protein and/or the E4 protein is expressed in one expression cassette. the
在根据本发明的腺病毒、特别是I组腺病毒的优选实施方案中,当将腺病毒应用于上述的C组细胞时,每个启动子独立地是肿瘤特异性的、 器官特异性的或组织特异性的启动子。与此相关,当至少一个控制E1B蛋白、E4蛋白和/或E1A蛋白的表达的启动子是这样的特异性启动子时是足够的。通过这样的肿瘤、器官和组织特异性,确保了根据本发明的腺病毒的复制仅仅发生在相应的肿瘤、器官和组织的细胞中,而且,除此之外,没有其它的组织受到腺病毒复制的破坏,例如被裂解。优选地,还有第二和更优选地,所有的3种由这样的肿瘤特异性的、器官特异性的或组织特异性的启动子控制。使用这样的腺病毒,还可以裂解不能形成肿瘤或不能发展成这样的肿瘤的细胞,但是出于其它的原因例如医学原因,要破坏它们或将它们从生物体除去,优选哺乳动物生物体,更优选人生物体,例如因为它们生产不希望的因子或以过高的水平生产这样的因子。 In a preferred embodiment of the adenovirus according to the present invention, especially the group I adenovirus, each promoter is independently tumor-specific, organ-specific or Tissue-specific promoters. In connection with this, it is sufficient when at least one promoter controlling the expression of the E1B protein, the E4 protein and/or the E1A protein is such a specific promoter. Through such tumor, organ and tissue specificity, it is ensured that the replication of the adenovirus according to the invention takes place only in the cells of the corresponding tumor, organ and tissue, and that, apart from this, no other tissues are subjected to the replication of the adenovirus damage, such as being cleaved. Preferably, also a second and more preferably, all 3 are controlled by such tumor-specific, organ-specific or tissue-specific promoters. Using such adenoviruses, it is also possible to lyse cells which are unable to form tumors or which cannot develop into such tumors, but for other reasons, such as medical reasons, they are to be destroyed or removed from an organism, preferably a mammalian organism, more Human organisms are preferred, for example because they produce undesired factors or produce such factors at excessively high levels. the
在一个实施方案中,认为使用所述的根据本发明的腺病毒裂解的细胞是抗性的,优选地表现出多种抗性。 In one embodiment, cells lysed using said adenovirus according to the invention are considered resistant, preferably exhibiting multiple resistances. the
如这里提及的抗性是肿瘤和要治疗的患者的特征,它们由下述基因介导,但是不限于它们:MDR,MRP,拓扑异构酶,BCL2,谷胱甘肽-2-转移酶(GST),蛋白激酶C(PKC)。由于细胞生长抑制剂是尤其以诱导细胞凋亡为基础,与细胞凋亡相关的基因的表达在任何抗性的产生中起关键作用,使得下述因子也是与其相关的,即Fas,BCL2家族,HSP 70和EGFR[Kim等,Cancer Chemther.Pharmacol.2002,50,343-352]。 Resistance as mentioned here is characteristic of the tumor and of the patient to be treated, they are mediated by, but not limited to, the following genes: MDR, MRP, topoisomerase, BCL2, glutathione-2-transferase (GST), protein kinase C (PKC). Since cytostatics are especially based on the induction of apoptosis, the expression of genes associated with apoptosis plays a key role in the development of any resistance, so that the following factors are also associated with it, namely Fas, BCL2 family, HSP 70 and EGFR [Kim et al., Cancer Chemther. Pharmacol. 2002, 50, 343-352]. the
Levenson等[Levenson,V.V.等,Cancer Res.,2000,60,5027-5030]已经记载,YB-1在抗性的肿瘤细胞中的表达比在无抗性的肿瘤细胞中显著提高。 Levenson et al. [Levenson, V.V. et al., Cancer Res., 2000, 60, 5027-5030] have documented that the expression of YB-1 is significantly higher in resistant tumor cells than in non-resistant tumor cells. the
如本文所用的抗性优选是指对本文所述的细胞生长抑制剂的抗性。该多药抗性抗性优选与膜结合转运蛋白P-糖蛋白的表达、优选过量表达一致,其可以用作确定各种细胞的标记,因此还可以用作具有该标记的肿瘤和各类患者组的标记。本文所用的术语抗性也包含P-糖蛋白介导的抗性,其也称为典型抗性,以及称为非典型抗性的抗性,其是MRP介导,或其它的,非P-糖蛋白介导的抗性。另一个与YB-1表达相关的标记是拓扑异构酶IIα。因此,为了确定患者是否可以使用腺病毒按照本发明治疗以获得预期成功,可以在代替或除了确定在核内的YB-1外的筛选方法中使用拓扑异构酶IIα。原则上,一种可以类似用作P-糖蛋白的标记是MRP。 至少就结直肠癌细胞或患结直肠癌的患者而言,另一个标记是PCNA(增殖细胞核抗原)(Hasan S.等,Nature,15,387-391,2001),例如Shibao K.等所述(Shibao K等,Int.Cancer,83,732-737,1999)。最后,至少在乳腺癌细胞和骨肉瘤细胞领域中,MDR(多重药抗性)的表达是在上述意义上的标记(Oda Y等,Clin.Cancer Res.,4,2273-2277,1998)。可以根据本发明使用的另一个可行的标记是p73(Kamiya,M.,Nakazatp,Y.,J Neurooncology 59,143-149(2002);Stiewe等,J.Biol.Chem.,278,14230-14236,2003)。 Resistance as used herein preferably refers to resistance to the cytostatic agents described herein. This multidrug resistance resistance is preferably consistent with expression, preferably overexpression, of the membrane-bound transporter P-glycoprotein, which can be used as a marker to determine various cells and thus also tumors and various types of patients with this marker Set of tags. The term resistance as used herein also encompasses resistance mediated by P-glycoprotein, also known as typical resistance, and resistance known as atypical resistance, which is MRP-mediated, or otherwise, non-P- Glycoprotein-mediated resistance. Another marker associated with YB-1 expression is topoisomerase IIα. Therefore, to determine whether a patient can be treated with adenovirus according to the invention with the expected success, topoisomerase IIα can be used in a screening method instead of or in addition to identifying YB-1 in the nucleus. In principle, a marker that can be used analogously for P-glycoprotein is MRP. Another marker, at least in the case of colorectal cancer cells or patients with colorectal cancer, is PCNA (proliferating cell nuclear antigen) (Hasan S. et al., Nature, 15, 387-391, 2001), as described e.g. by Shibao K. et al. (Shibao K et al., Int. Cancer, 83, 732-737, 1999). Finally, at least in the field of breast cancer cells and osteosarcoma cells, the expression of MDR (multidrug resistance) is a marker in the above sense (Oda Y et al., Clin. Cancer Res., 4, 2273-2277, 1998). Another feasible marker that can be used according to the present invention is p73 (Kamiya, M., Nakazatp, Y., J Neurooncology 59, 143-149 (2002); Stiewe et al., J. Biol. Chem., 278, 14230-14236 , 2003). the
最后,还应当将YB-1认为是乳腺癌的前兆标记,它可以在本发明中使用。只有在原发肿瘤具有具有升高的YB-1表达的患者中,会在手术和化疗后出现复发[Janz M.等Int.J.Cancer 2002,97,278-282]。 Finally, YB-1 should also be considered a precursor marker for breast cancer, which can be used in the present invention. Only in patients with primary tumors with elevated YB-1 expression, recurrence occurs after surgery and chemotherapy [Janz M. et al. Int. J. Cancer 2002, 97, 278-282]. the
本发明的一个特殊优势还在于,使用本文所述的根据本发明的腺病毒也可以治疗那些患者,否则这些患者被认为是在临床意义上不再可治疗的,因此利用现有技术方法治疗肿瘤病不再可能期望获得成功,特别是当细胞生长抑制剂和辐射的使用不再是合理可能的和不再可以在影响或减少肿瘤的意义上成功地进行时。术语肿瘤在本文通常是指任何肿瘤或癌症疾病,其固有地在细胞核内、优选地独立于细胞周期的核内含有YB-1,或通过施用如本文公开的外加措施而含有YB-1,和/或它们含有去调节的YB-1。 A particular advantage of the present invention is also that, using the adenoviruses according to the invention described herein, it is also possible to treat those patients who would otherwise be considered to be no longer treatable in a clinical sense, and therefore to treat tumors using the methods of the prior art The disease can no longer be expected to be successful, especially when the use of cytostatics and radiation is no longer reasonably possible and can no longer be done successfully in the sense of affecting or reducing the tumor. The term tumor generally refers herein to any tumor or cancerous disease which contains YB-1 intrinsically in the nucleus, preferably cell cycle-independent nucleus, or through the application of extrinsic measures as disclosed herein, and /or they contain deregulated YB-1. the
而且,本文所述的病毒原则上可以用于治疗肿瘤。优选地,这些肿瘤选自包含乳腺癌、卵巢癌、前列腺癌、骨肉瘤、成胶质细胞瘤、黑素瘤、小细胞肺癌和结直肠癌的组。其它肿瘤是如本文所述有抗性的那些,优选具有多重抗性的那些,特别还是上述组的那些肿瘤。特别优选的肿瘤是选自包含乳腺肿瘤、骨肿瘤、胃肿瘤、肠肿瘤、胆囊肿瘤、胰腺癌、肝肿瘤、肾肿瘤、脑瘤、卵巢肿瘤、皮肤和皮肤附属物肿瘤、头/颈肿瘤、子宫瘤、关节瘤、喉瘤、唾液腺肿瘤、食道瘤、舌肿瘤和前列腺瘤的组。与此相关,优选这些肿瘤整体如本文所述被表示。 Furthermore, the viruses described herein could in principle be used in the treatment of tumors. Preferably, these tumors are selected from the group comprising breast cancer, ovarian cancer, prostate cancer, osteosarcoma, glioblastoma, melanoma, small cell lung cancer and colorectal cancer. Other tumors are those which are resistant as described herein, preferably those which are multi-resistant, in particular also those tumors of the above mentioned groups. Particularly preferred tumors are selected from the group consisting of breast tumors, bone tumors, stomach tumors, intestinal tumors, gallbladder tumors, pancreatic cancer, liver tumors, kidney tumors, brain tumors, ovarian tumors, skin and skin appendage tumors, head/neck tumors, Group of tumors of the uterus, joints, larynx, salivary glands, esophagus, tongue and prostate. In this connection, preferably these tumors are represented in their entirety as described herein. the
本发明的腺病毒,优选地I组腺病毒和要根据本发明使用的腺病毒,优选地II组腺病毒。 Adenoviruses according to the invention, preferably group I adenoviruses and adenoviruses to be used according to the invention, preferably group II adenoviruses. the
本文所述的腺病毒、特别是I组腺病毒和/或II组腺病毒的作为药物的应用,特别地与全身给药相关,可以通过腺病毒的适当靶向来改善。通过 腺病毒对肿瘤细胞的感染尤其在一定程度上依赖于coxackievirus-腺病毒受体CAR和独特的整联蛋白的存在。它们一旦在肿瘤细胞中强烈表达,在非常低效价(pfu/细胞)发生感染是可能的。为了实现所谓的重组腺病毒的重新靶向,迄今已经尝试了多种策略,例如分别通过将异源序列插入到纤维结节区,使用双特异性的抗体,用聚合物包被腺病毒,将配体导入Ad纤维,将血清型5结节(knob)和血清型5纤维轴(shaft)和结节替代为血清型3结节和Ad 35纤维轴和结节,修饰五邻体基底(penton base)(Nicklin S.A.等,Molecular Therapy 2001,4,534-542;Magnusson,M.K.等,J.of Virology 200 1,75,7280-7289;Barnett B.G.等,Biochimica etBiophysicaActa 2002,1575,1-14)。本发明包括,分别在根据本发明的腺病毒和根据本发明使用的腺病毒、特别是I组腺病毒和II组腺病毒中,实现这样的其它实施方案和特征的本发明的各个方面。
The use of the adenoviruses described herein, in particular group I adenoviruses and/or group II adenoviruses, as pharmaceuticals, in particular in relation to systemic administration, can be improved by appropriate targeting of the adenoviruses. Infection of tumor cells by adenoviruses in particular is somewhat dependent on the presence of the coxackievirus-adenovirus receptor CAR and unique integrins. Once they are strongly expressed in tumor cells, infection at very low titers (pfu/cell) is possible. To achieve the so-called retargeting of recombinant adenoviruses, various strategies have been tried so far, such as inserting heterologous sequences into the fibrous nodule region, using bispecific antibodies, coating adenoviruses with polymers, and Ligands were introduced into Ad fibers,
另一方面,本发明涉及筛选患者的方法,该患者可以使用一种修饰的腺病毒治疗,即根据本发明使用的腺病毒例如AdΔ24,dl922-947,E1Ad/01/07,CB016或欧洲专利EP 0 931 830中描述的病毒,和/或I组腺病毒和/或II组腺病毒,其中所述的方法包含下列步骤: In another aspect, the invention relates to a method of screening patients for treatment with a modified adenovirus, i.e. an adenovirus used according to the invention such as AdΔ24, dl922-947, E1Ad/01/07, CB016 or European patent EP A virus as described in 0 931 830, and/or adenovirus group I and/or adenovirus group II, wherein said method comprises the following steps:
-分析肿瘤组织的样品,和 - analyze samples of tumor tissue, and
-确定YB-1是否定位在独立于细胞周期的核内,或者该细胞是否含有去调节的YB-1。 - Determine whether YB-1 is localized in the nucleus independent of the cell cycle, or whether the cells contain deregulated YB-1. the
代替或除了YB-1,可以检测上述标记的存在。 Instead of or in addition to YB-1, the presence of the above markers can be detected. the
在肿瘤组织或其一部分在核内含有YB-1、特别是独立于细胞周期,或含有去调节的YB-1的情形中,可以根据本发明使用本文公开的腺病毒、特别是I组腺病毒和II组腺病毒。 In cases where tumor tissue or a part thereof contains YB-1 in the nucleus, in particular cell cycle independent, or deregulated YB-1, the adenoviruses disclosed herein, in particular group I adenoviruses, can be used according to the invention and group II adenoviruses. the
在根据本发明的方法的一个实施方案中,通过使用试剂完成肿瘤组织的分析,该试剂选自包含针对YB-1的抗体,针对YB-1的适体,和针对YB-1的spiegelmer以及针对YB-1的抗促成素(anticaline)的组。原则上,还可以制备相同种类的试剂,并分别用于各自的标记。抗体、特别是单克隆抗体的制备是本领域技术人员已知的。特异性检测YB-1或标记的另一种试剂是与它们的靶结构以高亲和力结合的肽,在本发明的情形中的靶结构为YB-1或所述标记。为了产生这样的肽,在现有技术中已知其方法, 例如噬菌体-展示。为此目的,从肽库开始,其中单个肽具有约8-20个氨基酸的长度,库的大小约有102-1018、优选108-1015种不同的肽。一种能结合多肽的特殊形式的靶分子是所谓的抗促成素,其例如在德国专利申请DE 197 42 706中描述。 In one embodiment of the method according to the present invention, the analysis of tumor tissue is accomplished by using a reagent selected from the group consisting of antibodies against YB-1, aptamers against YB-1, and spiegelmers against YB-1 and against Group of anticalines of YB-1. In principle, reagents of the same kind can also be prepared and used separately for the respective labels. The preparation of antibodies, particularly monoclonal antibodies, is known to those skilled in the art. Another reagent that specifically detects YB-1 or the marker is a peptide that binds with high affinity to their target structure, which in the case of the present invention is YB-1 or said marker. In order to produce such peptides, methods are known in the prior art, such as phage-display. For this purpose, starting from a peptide library, where individual peptides have a length of about 8-20 amino acids, the size of the library is about 10 2 -10 18 , preferably 10 8 -10 15 different peptides. A special form of target molecule capable of binding polypeptides is the so-called anti-enableins, which are described, for example, in German patent application DE 197 42 706 .
用于特异性地结合YB-1或本文公开的相应标记、并因此检测独立于细胞周期的YB-1在细胞核内的定位的另一种试剂是所谓的适体,即D-核酸,其以RNA或DNA为基础,作为单链或双链存在,并特异性地与靶分子结合。适体的产生例如在欧洲专利EP 0 533 838中描述。适体的一种具体实施方案是所谓的aptazyme,其例如在Piganeau,N.等(2000),Angew.Chem.Int.Ed.,39,no.29,第4369-4373页中描述。它们是适体的具体实施方案,因为它们除了包含适体部分外还包含核酶部分,在结合或释放结合适体部分的靶分子以后,核酶部分获得催化活性并剪切核酸底物,这伴随着信号的产生。 Another reagent for specifically binding YB-1 or the corresponding markers disclosed herein, and thus detecting the cell cycle-independent localization of YB-1 in the nucleus, is the so-called aptamer, i.e. a D-nucleic acid, which takes the form RNA or DNA based, exist as single or double strands, and bind specifically to target molecules. The generation of aptamers is described, for example, in European patent EP 0 533 838. A specific embodiment of an aptamer is the so-called aptazyme, which is described, for example, in Piganeau, N. et al. (2000), Angew. Chem. Int. Ed., 39, no. 29, pp. 4369-4373. They are specific embodiments of aptamers because they contain, in addition to the aptamer part, a ribozyme part which, after binding or releasing the target molecule bound to the aptamer part, acquires catalytic activity and cleaves the nucleic acid substrate, which Accompanied by the signal generation. the
另一种形式的适体是所谓的spiegelmer,即由L-核酸组成的靶分子结合核酸。制备该spiegelmer的方法例如在WO 98/08856中描述。 Another form of aptamer is the so-called spiegelmer, ie a target molecule consisting of L-nucleic acid binding nucleic acid. Methods for preparing such spiegelmers are described, for example, in WO 98/08856. the
可以通过穿刺或通过外科手术获得肿瘤组织的样品。对YB-1是否定位于独立于细胞周期的核内的评估经常通过使用显微镜技术和/或免疫组织学分析进行,典型地使用抗体或任何其它的前述试剂来完成。本领域技术人员已知其它方法来检测YB-1在核内的存在和它在其中的定位是独立于细胞周期的。例如,当扫描针对YB-1染色的组织切片时,可以容易地检测YB-1的定位。YB-1在核内的存在频率已经成为在核中独立于细胞周期地定位的指征。独立于细胞周期地检测核内的YB-1的另一可能性是,针对YB-1进行染色并检测YB-1是否定位于核内和确定细胞的阶段。然而,这以及YB-1的检测也可以通过使用前述针对YB-1的试剂实现。通过本领域技术人员已知的方法进行试剂的检测。因为所述的试剂特异性地指向YB-1、因此不结合要分析的样品中的其它结构、特别是细胞的其它结构,借助于试剂的合适标记和由于它们的特异性地结合到YB-1,可以检测和分析所述试剂的定位,还有YB-1的定位。标记试剂的方法对本领域技术人员是已知的。为了检测样品的细胞中含有多少去调节的YB-1,还可以使用相同的技术。由于去调节的YB-1与未去调节的YB-1相比也 表现出过表达,YB-1相对于参照样品的相对表达也可以使用,以便检测YB-1是否在分析的细胞中是去调节的。 Samples of tumor tissue can be obtained by puncture or by surgery. Assessment of whether YB-1 is localized in the nucleus independent of the cell cycle is often performed using microscopy techniques and/or immunohistological analysis, typically using antibodies or any other of the aforementioned reagents. Other methods are known to those skilled in the art to detect the presence of YB-1 in the nucleus and its localization therein is independent of the cell cycle. For example, the localization of YB-1 can be readily detected when scanning tissue sections stained for YB-1. The frequency of YB-1 in the nucleus has been indicative of a cell cycle-independent localization in the nucleus. Another possibility to detect YB-1 in the nucleus independently of the cell cycle is to stain for YB-1 and detect whether YB-1 is localized in the nucleus and determine the stage of the cell. However, this and the detection of YB-1 can also be achieved by using the aforementioned reagents for YB-1. Detection of reagents is performed by methods known to those skilled in the art. Because the reagents are specifically directed to YB-1 and therefore do not bind to other structures in the sample to be analyzed, in particular other structures of cells, by means of appropriate labeling of the reagents and due to their specific binding to YB-1 , can detect and analyze the localization of the reagent, as well as the localization of YB-1. Methods of labeling reagents are known to those skilled in the art. The same technique can also be used to detect how much deregulated YB-1 is contained in the cells of a sample. Since deregulated YB-1 also exhibits overexpression compared to non-deregulated YB-1, the relative expression of YB-1 relative to a reference sample can also be used in order to test whether YB-1 is deregulated in the analyzed cells. regulated. the
现在,利用附图和实施例进一步说明本发明,从中将获得新特征、实施方案和优势。与其相关地, The invention will now be further illustrated by means of figures and examples, from which new features, embodiments and advantages will be obtained. related to it,
图1显示了腺病毒载体的结构设计,该载体在本文中称为AdE1/E3-阴性的腺病毒载体,为野生型腺病毒和腺病毒dl520的E1/E3-缺失的腺病毒; Figure 1 shows the structural design of the adenovirus vector, which is referred to herein as an AdE1/E3-negative adenovirus vector, and is an E1/E3-deleted adenovirus of wild-type adenovirus and adenovirus dl520;
图2显示了E1A蛋白关于结合p300、p107和p105的结合域; Fig. 2 shows the binding domain of E1A protein about binding p300, p107 and p105;
图3显示了U2OS细胞,在用E1/E3-缺失的腺病毒Ad5(本文称为E1/E3-阴性的Ad5)和dl520感染后,在其核内不含有YB-1; Figure 3 shows U2OS cells, which do not contain YB-1 in their nuclei after infection with E1/E3-deleted adenovirus Ad5 (referred to herein as E1/E3-negative Ad5) and dl520;
图4显示了257RDB细胞,在用E1/E3-缺失的腺病毒Ad5(本文称为E1/E3-阴性Ad5)和腺病毒dl520感染后,在其核内含有YB-1; Figure 4 shows 257RDB cells containing YB-1 in their nuclei after infection with E1/E3-deleted adenovirus Ad5 (referred to herein as E1/E3-negative Ad5) and adenovirus dl520;
图5显示了在用腺病毒dl1119/1131感染后的257RDB细胞和U2OS细胞; Figure 5 shows 257RDB cells and U2OS cells after infection with adenovirus dl1119/1131;
图6显示了EMSA分析的结果,其证实了YB-1存在于多抗性的细胞和细胞系257RDB,181 RDB,MCF-7Ad的细胞核中,而YB-1不存在于U2OS和HeLa细胞的核内; Figure 6 shows the results of EMSA analysis, which confirmed that YB-1 exists in the nuclei of multi-resistant cells and cell lines 257RDB, 181 RDB, MCF-7Ad, while YB-1 does not exist in the nuclei of U2OS and HeLa cells Inside;
图7显示了野生型腺病毒、腺病毒dl520和腺病毒dl1119/113 1的E1A蛋白的结构设计; Figure 7 shows the structural design of the E1A protein of wild-type adenovirus, adenovirus dl520 and adenovirus dl1119/1131;
图8是显示了在另外表达的病毒蛋白的存在下腺病毒复制效率的直方图,为绝对数值; Figure 8 is a histogram showing the replication efficiency of adenoviruses in the presence of additionally expressed viral proteins, as absolute values;
图9是显示了在另外表达的病毒蛋白的存在下腺病毒复制效率增加的直方图; Figure 9 is a histogram showing the increase in adenovirus replication efficiency in the presence of additionally expressed viral proteins;
图10显示了在结晶紫染色和用10和30 pfu/细胞的dl520感染后和对照(K)的U2OS细胞生长的孔,分别未施用柔红霉素和施用40 ng柔红霉素/ml; Figure 10 shows wells grown with U2OS cells after crystal violet staining and infection with dl520 at 10 and 30 pfu/cell and control (K), without and with 40 ng daunorubicin/ml, respectively;
图11显示了在结晶紫染色和用10和30 pfu/细胞的dl520感染后和对照(K)的HeLa细胞生长的孔,分别未施用柔红霉素和施用40 ng柔红霉素/ml; Figure 11 shows wells grown with HeLa cells after crystal violet staining and infection with dl520 at 10 and 30 pfu/cell and control (K), without and with 40 ng daunorubicin/ml, respectively;
图12是不同来源(RDB257和HeLa)的肿瘤的肿瘤体积作为时间函数的图,其分别为在用PBS和dl520处理以后; Figure 12 is a graph of tumor volume as a function of time for tumors of different origin (RDB257 and HeLa), after treatment with PBS and dl520, respectively;
图13显示了杀死的小鼠的照片,在分别用PBS和5×108pfu dl520处理后,基于RDB257细胞该小鼠发展了肿瘤; Figure 13 shows photographs of killed mice that developed tumors based on RDB257 cells after treatment with PBS and 5 x 108 pfu dl520, respectively;
图14是感染了dl520以后的RDB257细胞和HeLa细胞的细胞提取物(皮下生长肿瘤)的DNA杂交印迹分析的结果; Figure 14 is the result of the DNA blot analysis of the cell extract (subcutaneous growth tumor) of RDB257 cells and HeLa cells after being infected with dl520;
图15是显示了YB-1核-阳性的肿瘤细胞(257RDB和181RDB)和YB-1核-阴性的肿瘤细胞(HeLa,U2OS)中的dl520和野生型腺病毒的复制效率和颗粒形成的直方图; Figure 15 is a histogram showing the replication efficiency and particle formation of dl520 and wild-type adenoviruses in YB-1 nuclear-positive tumor cells (257RDB and 181RDB) and YB-1 nuclear-negative tumor cells (HeLa, U2OS) picture;
图16显示了野生型腺病毒和腺病毒载体AdXVir03的结构设计; Figure 16 shows the structural design of wild-type adenovirus and adenovirus vector AdXVir03;
图17显示了腺病毒载体AdXVir03/01的结构设计;和 Figure 17 shows the structural design of the adenoviral vector AdXVir03/01; and
图18A/B显示了在结晶紫染色和用Ad3 12(20 pfu/细胞)、Xvir03(5 pfu/细胞)感染以后和对照(未感染)的18RDB细胞(图18A)和272RDB细胞(图18B)生长的孔,其中在感染后5天进行结晶紫染色; Figure 18A/B shows 18RDB cells (Figure 18A) and 272RDB cells (Figure 18B) after crystal violet staining and infection with Ad3 12 (20 pfu/cell), Xvir03 (5 pfu/cell) and control (uninfected) Outgrown wells in which crystal violet staining was performed 5 days post-infection;
图19显示了E2基因在感染了野生型腺病毒Ad5和腺病毒Ad3 12后的A549细胞和U2OS细胞中的表达的RNA印迹分析的结果; Figure 19 has shown the result of the Northern blot analysis of the expression in A549 cells and U2OS cells of E2 gene after being infected with wild-type adenovirus Ad5 and adenovirus Ad3 12;
图20显示了E2基因在感染了野生型腺病毒和腺病毒δ24后12和24小时的U2OS细胞中的表达的RNA印迹分析的结果; Figure 20 shows the results of Northern blot analysis of the expression of the E2 gene in U2OS cells 12 and 24 hours after infection with wild-type adenovirus and adenovirus δ24;
图21显示了腺病毒载体XvirPSJL1的结构设计; Figure 21 shows the structural design of the adenoviral vector XvirPSJL1;
图22显示了腺病毒载体XvirPSJL2的结构设计; Figure 22 shows the structural design of the adenoviral vector XvirPSJL2;
图23显示了在结晶紫染色和用不同pfu/细胞的腺病毒dl520感染后HeLa细胞生长的孔; Figure 23 shows the wells of HeLa cell growth after crystal violet staining and infection with adenovirus dl520 of different pfu/cell;
图24显示了表示荧光素酶在使用腺病毒2-晚期启动子的不同启动子片段的U2OS细胞、HeLa细胞和257RDB细胞中的活性的直方图; Figure 24 shows a histogram representing the activity of luciferase in U2OS cells, HeLa cells and 257RDB cells using different promoter fragments of the adenovirus 2-late promoter;
图25显示了表示用表达YB-1的腺病毒和病毒Ad3 12感染U2OS细胞2天和5天后的病毒颗粒数量的直方图,其中在细胞内残留的病毒颗粒(由黑色表示)和释放出的细胞外的病毒颗粒(水平条)间进行了区别。实施例1:根据本发明使用的腺病毒可以包含的E1A修饰的类型 Figure 25 shows a histogram representing the number of virus particles after 2 days and 5 days of infection of U2OS cells with adenovirus expressing YB-1 and virus Ad312, wherein virus particles remaining in the cells (indicated by black) and released A distinction is made between extracellular viral particles (horizontal bars). Example 1: Types of E1A modifications that adenoviruses used according to the invention may contain
图1显示了腺病毒载体AdE1/E3-阴性的(即E1/E3-缺失的腺病毒)、野 生型腺病毒和腺病毒dl520的结构设计。 Figure 1 shows the structural design of the adenoviral vector AdE1/E3-negative (i.e. E1/E3-deleted adenovirus), wild-type adenovirus and adenovirus dl520. the
腺病毒AdE1/E3-阴性不含有编码功能性的E1A或功能性的E1B或E3的区域,在本实验中用作毒性对照。 Adenovirus AdE1/E3-negative, which does not contain the region encoding functional E1A or functional E1B or E3, was used as a toxicity control in this experiment. the
野生型E1A基因编码总共5个蛋白,其是通过E1ARNA的选择剪接产生的。其中,产生2个不同的蛋白,即289个氨基酸的蛋白和243个氨基酸的蛋白。dl520不编码289个氨基酸的蛋白,因为它在E1A基因的CR3区域中存在缺失,导致缺乏13S的基因产物。根据本发明可以使用的腺病毒dl520被本领域技术人员称为12S-E1A病毒。现有技术中已知的腺病毒dl347(Wong und Ziff,J.Virol.,68,4910-4920,1994)也是可以根据本发明使用的12S-E1A病毒。 The wild-type E1A gene encodes a total of 5 proteins that are produced by alternative splicing of the E1A RNA. Among them, 2 different proteins were produced, namely a protein of 289 amino acids and a protein of 243 amino acids. dl520 does not encode a 289 amino acid protein because it has a deletion in the CR3 region of the E1A gene, resulting in a lack of 13S gene product. The adenovirus d1520 that can be used according to the invention is known by those skilled in the art as 12S-E1A virus. The adenovirus dl347 known in the prior art (Wong und Ziff, J. Virol., 68, 4910-4920, 1994) is also a 12S-E1A virus that can be used according to the invention. the
在由13S-E1A mRNA编码的289个氨基酸的蛋白中,存在在各种腺病毒亚类之间保守的3个区域。这些称为CR1、CR2和CR3。尽管CR1和CR2存在两种E1A蛋白(E1A 12S和E1A 13S)中,即在289个氨基酸和243个氨基酸的蛋白中,CR3区域仅存在于前述两个蛋白中较大的一个中。
In the 289 amino acid protein encoded by 13S-E1A mRNA, there are 3 regions that are conserved among various adenovirus subclasses. These are called CR1, CR2 and CR3. Although CR1 and CR2 are present in two E1A proteins (
病毒基因特别是E1B、E2、E3和E4的激活需要CR3区域。仅含有较小(即243个氨基酸的)蛋白的病毒仅能极弱地反式激活病毒基因,并且不促进在核内不含有YB-1的那些细胞中的腺病毒的复制。因为YB-1仅存在于肿瘤细胞的核内和仅可以在那里检测到,该载体适合诱导肿瘤特异性的复制。 The CR3 region is required for activation of viral genes, especially E1B, E2, E3 and E4. Viruses containing only a small (ie, 243 amino acid) protein were only very weak in transactivating viral genes and did not promote replication of adenovirus in those cells that did not contain YB-1 in the nucleus. Since YB-1 is only present in the nucleus of tumor cells and can only be detected there, this vector is suitable for inducing tumor-specific replication. the
由于dl520中CR3的缺失,该腺病毒不能将细胞YB-1转移至细胞的核内,其在本文中也称为移位,因此不是在YB-1核-阴性的细胞中进行复制的位置,因此是可以根据本发明使用的病毒,其中所述的病毒包含根据本发明所需的反式激活。 Due to the absence of CR3 in dl520, the adenovirus is unable to translocate cellular YB-1 into the nucleus of the cell, which is also referred to herein as a translocation, and thus is not a site for replication in YB-1 nuclear-negative cells, Thus are viruses which can be used according to the invention, wherein said virus comprises the transactivation required according to the invention. the
实施例2:腺病毒的作用方式依赖于细胞的Rb状态 Example 2: The mode of action of adenovirus depends on the Rb state of the cell
图2显示了E1A蛋白的与p300、p107和p105的结合有关的结合域。P300以及p107是细胞结合蛋白。成视网膜细胞瘤蛋白(pRb)是一种肿瘤抑制蛋白,其结合是通过CR1和CR2介导的。研究已经表明,pRb和p107/p300结合在调节转录中有效的细胞转录因子E2F。野生型E1A蛋白能干扰E2F与Rb的结合。如此释放的E2F能结合E2早期启动子,并由 此诱导腺病毒的复制。 Figure 2 shows the binding domains of the E1A protein involved in the binding of p300, p107 and p105. P300 and p107 are cell-associated proteins. Retinoblastoma protein (pRb) is a tumor suppressor protein whose binding is mediated through CR1 and CR2. Studies have shown that pRb and p107/p300 bind the cellular transcription factor E2F, which is effective in regulating transcription. Wild-type E1A protein can interfere with the binding of E2F to Rb. The E2F thus released can bind to the E2 early promoter and thereby induce the replication of the adenovirus. the
从现有技术中已知,E1A癌蛋白中的某些缺失可能会产生如下面提及的那些的重组腺病毒载体,其能够在Rb-阴性的细胞中优势地复制且可以根据本发明使用。例如,腺病毒载体dl922-947包含CR2区域中的缺失(氨基酸位点122-129),载体CB016在CR1区域(氨基酸位点27-80)和CR2区域中具有缺失(氨基酸位点122-129)。载体E1Adl01/07在CR2区域中含有缺失(氨基酸位点111-123)。另外,因为在N-末端(氨基酸位点4-25)处的其它缺失,另外,不与蛋白p300结合。腺病毒载体AdΔ24在CR2区域中含有缺失(氨基酸位点120-127)。在专利EP 0 931 830中描述的腺病毒载体在CR1区域和CR2区域含有缺失。 It is known from the prior art that certain deletions in the E1A oncoprotein may result in recombinant adenoviral vectors such as those mentioned below, which are able to replicate predominantly in Rb-negative cells and which can be used according to the invention. For example, adenoviral vector dl922-947 contains a deletion in the CR2 region (amino acid positions 122-129), vector CB016 has deletions in the CR1 region (amino acid positions 27-80) and CR2 region (amino acid positions 122-129) . Vector E1Ad101/07 contains a deletion in the CR2 region (amino acid positions 111-123). Also, because of other deletions at the N-terminus (amino acid positions 4-25), otherwise, no binding to protein p300. The adenoviral vector Ad[Delta]24 contains a deletion in the CR2 region (amino acid positions 120-127). The adenoviral vector described in patent EP 0 931 830 contains deletions in the CR1 and CR2 regions. the
E2F/RB的结合机制和E1A介导的E2F的释放机制根本不同于构成本发明基础的机制。不同于现有技术中假设的,不是E2F从Rb蛋白中的释放,Rb蛋白即使不说对于病毒复制是关键性的也是必要的,而是人转录因子YB-1的核定位。该转录因子在正常细胞中在大多数细胞周期中仅存在于细胞质中。在用腺病毒感染以后,在某些情形下它被诱导入核内或者在不同的细胞系统中已经存在核内,如不同的肿瘤病,其包括例如但不限于乳腺癌,卵巢癌,前列腺癌,骨肉瘤癌,成胶质细胞瘤,黑素瘤,小细胞肺癌和结直肠癌。 The mechanism of E2F/RB binding and E1A-mediated release of E2F is fundamentally different from the mechanism underlying the present invention. Contrary to what was assumed in the prior art, it was not the release of E2F from the Rb protein, which is essential if not critical for viral replication, but the nuclear localization of the human transcription factor YB-1. This transcription factor is present only in the cytoplasm during most of the cell cycle in normal cells. After infection with adenovirus, in some cases it is induced into the nucleus or already present in the nucleus in different cell systems, such as different neoplastic diseases, which include for example but not limited to breast cancer, ovarian cancer, prostate cancer , osteosarcoma carcinoma, glioblastoma, melanoma, small cell lung cancer and colorectal cancer. the
实施例3:U2OS细胞的感染 Example 3: Infection of U2OS cells
每孔平铺100,000个U2OS细胞。次日用如图3所示的不同腺病毒感染细胞。在500μl无血清的DMEM培养基中在37℃下感染1小时。随后,去除感染培养基,并用2ml完全培养基(10%FCS/DMEM)替换。在3天后使用结晶紫染色进行分析。 100,000 U2OS cells were plated per well. The next day the cells were infected with different adenoviruses as shown in FIG. 3 . Infect in 500 μl serum-free DMEM medium for 1 hour at 37°C. Subsequently, the infection medium was removed and replaced with 2 ml of complete medium (10% FCS/DMEM). Analysis was performed after 3 days using crystal violet staining. the
如从图3中可以获得,在核内不含有YB-1的U2OS细胞在用两种不同腺病毒感染以后未显示如结晶紫染色所示的裂解,所述腺病毒即称为E1/E3-阴性的E1/E3-缺失的腺病毒、和腺病毒dl520,其可以根据本发明使用。与其相关,首先去除培养基。随后,用结晶紫(50%ETOH,3%甲醛,5%乙酸,1%结晶紫)覆盖细胞,在室温下孵育5-10分钟。随后,用水充分漂洗具有6个孔的平板,室温干燥。 As can be obtained from Figure 3, U2OS cells that do not contain YB-1 in the nucleus show no lysis as indicated by crystal violet staining after infection with two different adenoviruses, namely E1/E3- Negative E1/E3-deleted adenoviruses, and adenovirus dl520, can be used according to the invention. In relation thereto, the culture medium is removed first. Subsequently, cells were covered with crystal violet (50% ETOH, 3% formaldehyde, 5% acetic acid, 1% crystal violet) and incubated at room temperature for 5-10 minutes. Subsequently, the plate with 6 wells was rinsed well with water and dried at room temperature. the
这证实构成本发明基础的发现,即需要YB-1的存在以便诱导根据本发明使用的病毒来裂解感染的细胞。 This confirms the discovery underlying the present invention that the presence of YB-1 is required in order to induce the virus used according to the invention to lyse infected cells. the
实施例4:257RDB细胞的感染 Example 4: Infection of 257RDB cells
每孔平铺100,000个257RDB细胞。次日用如图4所示的不同腺病毒感染细胞。在500μl无血清的DMEM培养基中在37℃下感染1小时。随后,去除感染培养基,并用2ml完全培养基(10%FCS/DMEM)替换。在3天后使用结晶紫染色进行分析。 100,000 257RDB cells were plated per well. The next day the cells were infected with different adenoviruses as shown in FIG. 4 . Infect in 500 μl serum-free DMEM medium for 1 hour at 37°C. Subsequently, the infection medium was removed and replaced with 2 ml of complete medium (10% FCS/DMEM). Analysis was performed after 3 days using crystal violet staining. the
本实验的结果在图4中描述。经感染核内含有YB-1的257RDB细胞以后,称为E1/E3-阴性Ad5的、E1/E3-缺失的腺病毒在低MOI(pfu/细胞)下未显示任何裂解。与此相反,如实施例3所示的dl520,在YB-1核-阴性的细胞中不复制,同时编码根据本发明用于反式激活癌基因蛋白的E1A,在40pfu/细胞的MOI(感染复数)下导致实际上完全的裂解,和在10pfu/细胞的MOI下仍导致显著裂解。可以从中得出结论,dl520和类似的病毒如本文中通过dl1119/1131或AdXvir 03所述,需要与E1-缺失或E1/E3-缺失的腺病毒相比减小约1个数量级(十倍)的MOI,这证明了它们的临床应用。 The results of this experiment are depicted in FIG. 4 . The E1/E3-deleted adenovirus called E1/E3-negative Ad5 did not show any lysis at low MOI (pfu/cell) after infection of 257RDB cells containing YB-1 in the nucleus. In contrast, dl520, as shown in Example 3, does not replicate in YB-1 nuclear-negative cells, while encoding E1A for transactivating oncogene proteins according to the present invention, at an MOI of 40 pfu/cell (infection plural) resulted in virtually complete lysis, and still resulted in significant lysis at an MOI of 10 pfu/cell. From this it can be concluded that dl520 and similar viruses as described herein by dl1119/1131 or AdXvir 03 require about an order of magnitude (ten-fold) reduction compared to E1-deleted or E1/E3-deleted adenoviruses MOI, which justifies their clinical utility. the
如图7所示,dl520的蛋白E1A的特征在于其缺失CR3区域,导致根据本发明的应用所需的反式激活和YB-1核-阳性的细胞中的复制。 As shown in Figure 7, protein E1A of dl520 is characterized by its deletion of the CR3 region, leading to transactivation and replication in YB-1 nuclear-positive cells required for the application according to the invention. the
实施例5:用dl1119/1131感染257RDB和U2OS细胞 Example 5: Infection of 257RDB and U2OS cells with dl1119/1131
如图5所示,在用腺病毒dl1119/1131感染YB-1核-阴性U2OS细胞以后在20pfu/细胞的MOI下没有裂解,所述腺病毒dl1119/1131缺失E1A蛋白的氨基酸4-138和编码它们的核酸,并在氨基酸218后另外包含终止密码子,其中表达的截短的E1A蛋白包含完整的E1A蛋白的CR3区域。作为阴性对照,使用未感染的细胞层。
As shown in Figure 5, there was no lysis at an MOI of 20 pfu/cell after infection of YB-1 nuclear-negative U2OS cells with adenovirus dl1119/1131, which lacks amino acids 4-138 of the E1A protein and encodes their nucleic acids, and additionally comprise a stop codon after
与其相反,在如核内含有YB-1、即YB-1核-阳性的257RDB的细胞系统中,在腺病毒dl1119/1131的影响下,细胞层在20pfu/细胞的MOI下实际上完全裂解。因此该实施例是另一证据,其证明了如图7所示的修饰的E1A癌基因蛋白仅包含例如CR3区域和缺少CR1区域和CR2区域, 在YB-1核-阳性的细胞中能提供所需的反式激活,这是根据本发明的腺病毒的复制所需的,导致了病毒复制。腺病毒dl1119/1131因此是根据本发明可以使用的另一种腺病毒。本发明包括,也可以使用在CR3区域类似于dl1119/1131的设计但与其相反具有CR1区域和/或CR2区域的病毒。 In contrast, in a cell system such as a cell containing YB-1 in the nucleus, ie a YB-1 nuclear-positive 257RDB, under the influence of adenovirus dl1119/1131, the cell layer was virtually completely lysed at an MOI of 20 pfu/cell. This example is therefore further evidence that a modified E1A oncogene protein as shown in Figure 7, comprising only, for example, the CR3 region and lacking the CR1 and CR2 regions, can provide the desired effect in YB-1 nuclear-positive cells. The required transactivation, which is required for the replication of the adenovirus according to the invention, leads to viral replication. Adenovirus dl1119/1131 is thus another adenovirus that can be used according to the invention. The present invention encompasses that viruses having a design similar to dl1119/1131 in the CR3 region but having the CR1 region and/or the CR2 region instead can also be used. the
实施例6:检测多药抗性的细胞中的核YB-1 Example 6: Detection of nuclear YB-1 in multidrug resistant cells
本实施例是基于以下考虑,即核YB-1应当作为转录因子结合mdr1启动子(英文是multiple drug resistance promoter,多药抗性启动子)内的Y-盒(CAAT序列)。为了检测,进行所谓的EMSA分析(电泳迁移率变动分析)。与其相关,分离核蛋白,随后将1-10μg蛋白与短DNA片段(寡)一起在37℃下孵育。为了测定核YB-1,使用了下列寡核苷酸:与U2O3相对的mdr1启动子(位点-86至-67):TGAGGCTGATTGGCTGGGCA(X-盒加下划线)。 This example is based on the following considerations, that is, nuclear YB-1 should be used as a transcription factor to bind to the Y-box (CAAT sequence) in the mdr1 promoter (multiple drug resistance promoter in English). For detection, a so-called EMSA analysis (Electrophoretic Mobility Shift Assay) is carried out. In relation thereto, nucleoproteins are isolated and 1-10 μg of protein are subsequently incubated with short DNA fragments (oligos) at 37°C. For the determination of nuclear YB-1, the following oligonucleotides were used: mdr1 promoter (positions -86 to -67) opposite U2O3: TGAGGCTGATTGGCTGGGCA (X-box underlined). the
在这之前,在5’末端用32P放射性标记该DNA片段。随后,在天然聚丙烯酰胺凝胶中进行分离。在蛋白YB-1结合寡核苷酸中序列的情形中,可以检测它,因为任何未结合的寡核苷酸在凝胶中的迁移比结合的寡核苷酸迁移快(Holm,P. S.等,JBC 277,10427-10434,2002;Bargou,R.C.等,Nature Medicine 3,447-450,1997)。
Prior to this, the DNA fragment was radiolabeled with 32 P at the 5' end. Subsequently, separation was carried out in native polyacrylamide gels. In the case of protein YB-1 binding to sequences in oligonucleotides, it can be detected because any unbound oligonucleotides migrate faster in the gel than bound oligonucleotides (Holm, P. S. et al., JBC 277, 10427-10434, 2002; Bargou, RC et al.,
如图6所示,EMSA分析可以证实,与细胞系U2OS和HeLa细胞形成对比,多药抗性的细胞257RDB、181RDB和MCF-7Ad细胞的核中存在YB-1。 As shown in Figure 6, EMSA analysis could confirm the presence of YB-1 in the nuclei of the multidrug resistant cells 257RDB, 181RDB and MCF-7Ad cells in contrast to the cell lines U2OS and HeLa cells. the
实施例4和5的结果证实,与U205形成对比,腺病毒dl520和dl1119/1131在YB-1核-阳性的细胞例如257RDB中复制,并诱导其裂解。这证实了关于根据本发明的腺病毒的应用的发现。另外,该结果已经证实,与野生型腺病毒相比,在YB-1核-阳性的细胞中通过修饰或缺失的E1A基因产物来微弱地反式激活病毒基因,在核内YB-1存在下导致成功的复制和这些细胞的裂解,这些细胞包括例如多药抗性的细胞,本文所述的腺病毒可以因此用于裂解这些肿瘤。 The results of Examples 4 and 5 demonstrate that, in contrast to U205, adenoviruses dl520 and dl1119/1131 replicate in YB-1 nuclear-positive cells such as 257RDB and induce their lysis. This confirms the findings regarding the use of the adenovirus according to the invention. In addition, the results have demonstrated weak transactivation of viral genes by modified or deleted E1A gene products in YB-1 nuclear-positive cells in the presence of nuclear YB-1 compared to wild-type adenovirus. Leading to successful replication and lysis of these cells, including, for example, multidrug resistant cells, the adenoviruses described herein can thus be used to lyse these tumors. the
实施例7:提高E1-阴性腺病毒的复制效率 Embodiment 7: Improve the replication efficiency of E1-negative adenovirus
本实施例证实,早期病毒基因E1B-55K和E4orf6可以通过用质粒pE4orf6转染和E1/E3-缺失的腺病毒Ad-55K感染来替代。Ad-55K是缺失E1/E3的病毒,由此将E1B-55K克隆到E1中并在CMV的控制下。根据以下事实该替代是需要的,即AdYB-1(表达YB-1的腺病毒)不表达这些早期基因,本发明的发明人已经认识到,在核内含有YB-1的复制系统中,这些早期基因的替代能够分别提高复制效率和颗粒形成效率,其程度比得上一种类型Ad5的野生型腺病毒。 This example demonstrates that early viral genes E1B-55K and E4orf6 can be replaced by transfection with plasmid pE4orf6 and infection with E1/E3-deleted adenovirus Ad-55K. Ad-55K is an E1/E3 deleted virus whereby E1B-55K was cloned into El and under the control of CMV. This substitution was required in light of the fact that AdYB-1 (adenovirus expressing YB-1) does not express these early genes, and the inventors of the present invention have realized that in a replication system containing YB-1 in the nucleus, these Replacement of early genes was able to improve replication efficiency and particle formation efficiency, respectively, to a degree comparable to wild-type adenovirus of one type Ad5. the
进行以下各项: Do the following:
使用脂转染胺,用质粒pE4orf6转染各个105U2OS细胞。质粒pE4orf6携带在CMV控制下的编码早期病毒基因E4orf6的DNA序列。 Each 105 U2OS cells were transfected with plasmid pE4orf6 using lipofectamine. Plasmid pE4orf6 carries the DNA sequence encoding the early viral gene E4orf6 under the control of CMV.
用质粒pE4orf6转染后24小时,用表达YB-1的E1/E3-缺失腺病毒AdYB-1(50 pfu/细胞)和E1/E3-缺失的E1B-55K腺病毒Ad-55K(50 pfu/细胞)感染细胞。Ad-55K是E1/E3-缺失的病毒,其携带在CMV控制下的作为转基因的病毒基因E1B-55K。 24 hours after transfection with plasmid pE4orf6, E1/E3-deleted adenovirus AdYB-1 (50 pfu/cell) expressing YB-1 and E1/E3-deleted E1B-55K adenovirus Ad-55K (50 pfu/cell) cells) infected cells. Ad-55K is an E1/E3-deleted virus carrying the viral gene E1B-55K as a transgene under the control of CMV. the
随后,在感染后5天(=感染后)从培养基(2ml)中去除细胞。通过交替冷冻和解冻3次(融/冻),从分离的细胞中释放病毒颗粒。随后,对293个细胞进行噬菌斑试验,以测定产生的感染性颗粒(噬菌斑形成单位/ml(pfu/ml))。结果在图8和9中表示。图8显示了噬菌斑试验的结果,以绝对数值表示。通过用质粒pE4orf6转染和用两种病毒AdYB-1和Ad-55K共感染来显示了与仅用AdYB-1感染相比的最显著的差别。图9显示了图8的结果,其中复制效率的提高表示为对AdYB-1测定的复制倍数。用质粒pE4orf6和随后用AdYB-1和E1B-55K(Ad-55K)感染的细胞产生高达25倍多的pfu/ml。
Subsequently, cells were removed from the culture medium (2 ml) 5 days after infection (=post infection). Virus particles were released from isolated cells by alternating freezing and
基于这些结果可以得出结论,E1B-55K和E4orf6的替代提高了用E1/E3-缺失的腺病毒AdYB-1感染后形成的病毒数量(pfu/ml)高达25倍。与两种基因产物各自的效果相比,E1B-55K和E4orf6对生成噬菌斑形成单位(pfu)的附加作用显著更高。 Based on these results it can be concluded that substitution of E1B-55K and E4orf6 increased the amount of virus formed (pfu/ml) up to 25-fold upon infection with the E1/E3-deleted adenovirus AdYB-1. The additive effects of E1B-55K and E4orf6 on the generation of plaque forming units (pfu) were significantly higher compared to the individual effects of the two gene products. the
使用表达EGFP的一个质粒的对照实验清楚地证实了,在所选实验方法中,仅10%的细胞被质粒pE4orf6成功地转染。在能表达E1B-55K和E4orf6的细胞中形成的颗粒数量比得上一种的人腺病毒类型5(野生型)。 这证实了构成本发明基础的发现,即E4orf6和E1B-55K的表达、再结合YB-1的核定位,能够提供腺病毒复制和颗粒形成,特别是E1A-缺失的腺病毒,其比得上一种野生型Ad5。 Control experiments using a plasmid expressing EGFP clearly demonstrated that only 10% of cells were successfully transfected with plasmid pE4orf6 in the chosen experimental method. The number of particles formed in cells expressing E1B-55K and E4orf6 was comparable to that of a human adenovirus type 5 (wild type). This confirms the discovery that forms the basis of the present invention that the expression of E4orf6 and E1B-55K, combined with the nuclear localization of YB-1, can provide adenoviral replication and particle formation, especially for E1A-deleted adenoviruses, which are comparable to A wild-type Ad5. the
实施例8:在YB-1核-阳性的细胞中经施用细胞生长抑制剂后提高的腺病 Example 8: Elevated adenosis after administration of cytostatics in YB-1 nuclear-positive cells
毒复制,该腺病毒在YB-1核阴性的细胞中不复制 Virus replication, the adenovirus does not replicate in YB-1 nuclear negative cells
现有技术中已知,加入不同的细胞生长抑制剂会诱导人转录因子YB-1的核定位。如本发明的发明人已经发现,定位在核内的YB-1通过激活腺病毒2-晚期启动子来控制腺病毒复制。为了提供特异性的肿瘤裂解,可以组合使用两种作用。 It is known in the prior art that the addition of different cytostatic agents induces the nuclear localization of the human transcription factor YB-1. As the inventors of the present invention have found, YB-1 localized in the nucleus controls adenovirus replication by activating the adenovirus 2-late promoter. To provide specific tumor lysis, both actions can be used in combination. the
在肿瘤消解测定的实施中,依照下列步骤:将200,000个细胞(分别为HeLa和U2OS)接种到6孔板的每孔中。次日,加入40 ng/ml(终浓度)的柔红霉素。在孵育3小时后,分别用10和30 pfu dl520/细胞感染细胞。随后,将细胞在无细胞生长抑制剂的培养基中孵育。在3-5天后,使用结晶紫将细胞染色。 In the implementation of the tumor digestion assay, the following steps were followed: 200,000 cells (HeLa and U2OS, respectively) were seeded into each well of a 6-well plate. The next day, add 40 ng/ml (final concentration) of daunorubicin. After 3 h of incubation, cells were infected with 10 and 30 pfu dl520/cell, respectively. Subsequently, the cells were incubated in medium without cytostatics. After 3-5 days, cells were stained with crystal violet. the
如从图10和11中可以获知,柔红霉素的加入会通过YB-1的核定位诱导dl520的复制。因此,与只用柔红霉素相比,与细胞生长抑制剂柔红霉素组合使用,dl520产生更大的肿瘤裂解效果。 As can be seen from Figures 10 and 11, addition of daunorubicin induces replication of dl520 through nuclear localization of YB-1. Thus, dl520 produced a greater tumor lytic effect in combination with the cytostatic growth inhibitor daunorubicin compared to daunorubicin alone. the
实施例9:dl520的体内肿瘤裂解 Example 9: In vivo tumor lysis of dl520
在无菌细胞培养条件下,繁殖用于本体内研究的HeLa(YB-1核-阴性)和257RDB(YB-1核阳性)细胞。在将细胞注射到小鼠(CD1NuNu品系)中以便产生皮下肿瘤之前,通过胰蛋白酶处理收集细胞,放入DMEM培养基(10%FCS)中,计数并用PBS洗涤一次。随后,将细胞离心,吸出PBS,以期望的细胞数目将细胞在新鲜PBS中分份。在本研究中,皮下注射的细胞数是两个细胞系每个5×106个细胞。进行皮下注射至动物的一侧,其中将HeLa细胞注射到右侧,将257RDB细胞注射到左侧,以更好的区分。1周2次对比肿瘤的生长,其中使用游标卡尺测量肿瘤的长度和宽度。基于此,基于下列数学公式计算肿瘤体积: HeLa (YB-1 nuclear-negative) and 257RDB (YB-1 nuclear-positive) cells for in vivo studies were propagated under sterile cell culture conditions. Before injecting cells into mice (CD1NuNu strain) to generate subcutaneous tumors, cells were harvested by trypsinization, placed in DMEM medium (10% FCS), counted and washed once with PBS. Subsequently, the cells were centrifuged, the PBS was aspirated, and the cells were aliquoted in fresh PBS at the desired cell number. In this study, the number of cells injected subcutaneously was 5 x 106 cells for each of the two cell lines. Subcutaneous injections were made to one side of the animal, where HeLa cells were injected on the right side and 257RDB cells on the left side for better differentiation. Tumor growth was compared twice a week, where the length and width of the tumor was measured using a vernier caliper. Based on this, the tumor volume was calculated based on the following mathematical formula:
3/4π*a/2*(b/2)2 a=长度,b=宽度 3/4π*a/2*(b/2) 2 a=length, b=width
一旦肿瘤已经达到200-520mm3的体积,分别在肿瘤内施用病毒和作为阴性对照的PBS。注射的体积相等,每次50μl。连续3天重复注射。施用病毒的总剂量为5×108pfu。随后,继续1周2次记录肿瘤生长,计算体积。在研究结束时杀死小鼠,取出肿瘤用于进一步分析。 Once the tumors had reached a volume of 200-520 mm3 , the virus and PBS as a negative control were administered intratumorally, respectively. Injection volumes were equal, 50 μl each time. Injections were repeated for 3 consecutive days. The total dose of virus administered was 5 x 10 8 pfu. Subsequently, the tumor growth was recorded twice a week, and the volume was calculated. Mice were sacrificed at the end of the study and tumors were removed for further analysis.
结果在图12和13中表示。 The results are shown in Figures 12 and 13. the
图12显示了表示作为时间函数的肿瘤体积和不同治疗方案的图表。在通过RDB257形成肿瘤的情形中,在注射PBS以后肿瘤显著生长至约438mm3-1466mm3。在根据本发明使用的载体dl520的影响下,肿瘤的生长显著减小。从344mm3的平均肿瘤大小开始,肿瘤大小仅增加了21%,达到共计543mm3。 Figure 12 shows a graph representing tumor volume as a function of time and different treatment regimens. In the case of tumor formation by RDB257, the tumor grew significantly to about 438 mm 3 -1466 mm 3 after PBS injection. Under the influence of the vector dl520 used according to the invention, the growth of tumors was significantly reduced. Starting from a mean tumor size of 344 mm 3 , tumor size increased by only 21% to a total of 543 mm 3 .
在本实施例中,将由HeLa细胞组成的肿瘤用作对照,其在施用PBS以后的行为类似于在施用PBS以后的基于RDB257的肿瘤。然而,基于HeLa细胞和用dl520处理的肿瘤仍显示了肿瘤生长的显著增加,从311mm3开始增加至1954mm3。 In this example, a tumor consisting of HeLa cells was used as a control, which behaved similarly to RDB257-based tumors after PBS administration. However, tumors based on HeLa cells and treated with dl520 still showed a significant increase in tumor growth, starting from 311 mm 3 to 1954 mm 3 .
图13显示了杀死的裸鼠的照片,所述裸鼠具有使用RDB257生长的肿瘤。可以清楚的看见,在根据本发明施用腺病毒dl520以后,出现了肿瘤的显著减少。在本情形中甚至还有肿瘤体积的减小(施用病毒dl520后第1天:515mm3;在施用病毒dl520后第30天:350mm3)。
Figure 13 shows photographs of killed nude mice with tumors grown using RDB257. It can clearly be seen that following administration of the adenovirus dl520 according to the invention, a significant reduction in tumors occurs. In this case there was even a reduction in tumor volume (
实施例10:肿瘤DNA的DNA印迹 Example 10: Southern Blotting of Tumor DNA
从肿瘤样品中提取DNA,该肿瘤样品取自实施例9中繁殖的肿瘤中间。为了分离,使用Qiagen的Dneasy Tissue Kit。按照制造商的使用说明完成DNA分离。按照其,通过碱裂解从细胞中释放出DNA。随后,经柱纯化分离的DNA。随后,通过光度测定法在260 nm测定分离的DNA的浓度。使用2μgDNA样品进行分析,该DNA样品用10个单位的限制酶KpnI处理过。随后,在0.8%的琼脂糖凝胶中进行样品的电泳分离。随后,将DNA印迹在尼龙膜上(按照Schleicher&Schuell系统进行)。将印迹在膜上的DNA对特异性的1501bp的DNA探针杂交。1501bp的DNA探针特异性地结合编码E2A的Ad5序列内的3369bp的Kpn I片段。之前通过PCR(引物:5‘-GTC GGA GAT CAG ATC CGC GT(SEQ.ID.No.2),5‘- GAT CCT CGT CGT CTT CGC TT(SEQ.ID.No.3))制备探针,并使用32P放射性地标记。随后,洗涤膜并曝光于胶片。 DNA was extracted from tumor samples taken from the middle of the tumor propagated in Example 9. For isolation, Qiagen's Dneasy Tissue Kit was used. Complete DNA isolation according to the manufacturer's instructions. According to it, DNA is released from cells by alkaline lysis. Subsequently, the isolated DNA was column purified. Subsequently, the concentration of isolated DNA was determined by photometry at 260 nm. For the analysis, 2 μg of DNA samples treated with 10 units of restriction enzyme KpnI were used for analysis. Subsequently, electrophoretic separation of the samples was performed on a 0.8% agarose gel. Subsequently, the DNA was blotted on a nylon membrane (performed according to the Schleicher & Schuell system). The DNA blotted on the membrane was hybridized to a specific 1501 bp DNA probe. The 1501bp DNA probe specifically binds to the 3369bp Kpn I fragment within the Ad5 sequence encoding E2A. Probes were previously prepared by PCR (primers: 5'-GTC GGA GAT CAG ATC CGC GT (SEQ.ID.No.2), 5'-GAT CCT CGT CGT CTT CGC TT (SEQ.ID.No.3)), and radioactively labeled with 32 P. Subsequently, the membrane is washed and exposed to film.
肿瘤DNA的DNA印迹结果在图14中表示。分析证实了,仅dl520在抗性细胞RDB257中体外复制,如泳道3、4和5所示。泳道1显示了阳性对照Ad-5d,泳道6、7和8显示了来自感染了dl520的HeLa细胞的DNA。因为HeLa细胞不是YB-1核阳性的,病毒dl520不复制,因此据此不可以检测E2A序列。
The results of Southern blot of tumor DNA are shown in FIG. 14 . Analysis confirmed that only dl520 replicated in vitro in resistant cells RDB257, as shown in
dl520的其它结果在图15中表示。基于噬菌斑试验,在用dl520和野生型腺病毒感染以后研究颗粒形成(pfu/ml)。用dl520和野生型腺病毒感染了各种YB-1核-阳性(257RDB和181RDB)的肿瘤细胞和YB-1核-阴性的肿瘤细胞。 Additional results for dl520 are shown in FIG. 15 . Particle formation (pfu/ml) was studied after infection with dl520 and wild type adenovirus based on plaque assay. Various YB-1 nuclear-positive (257RDB and 181RDB) tumor cells and YB-1 nuclear-negative tumor cells were infected with dl520 and wild-type adenovirus. the
实施下列步骤: Carry out the following steps:
将100,000-200,000个细胞各自接种到所谓的具有6个孔的平板(即6孔平板)中的L15培养基(抗性的细胞)和含有10%FCS的DMEM(非抗性的细胞)。24小时后,用dl520和野生型腺病毒进行感染(10pfu/细胞)。感染后(感染之后)3天,通过交替冷冻和解冻3次从细胞悬浮液(3ml)中释放病毒颗粒。随后,对293个细胞进行噬菌斑试验,以测定形成的感染性颗粒(噬菌斑形成单位/ml(pfu/ml))。结果在图15中显示。噬菌斑试验的结果表明,类似于野生型腺病毒,dl520在YB-1核-阳性的细胞(257RDB和181RDB)中复制。因此,当根据本发明使用本文所述的腺病毒时,可以观察到类似于一种野生型腺病毒的复制效率。 100,000-200,000 cells were each seeded into so-called 6-well plates (ie, 6-well plates) in L15 medium (resistant cells) and DMEM containing 10% FCS (non-resistant cells). After 24 hours, infection was performed with dl520 and wild-type adenovirus (10 pfu/cell). Three days post-infection (after infection), virus particles were released from the cell suspension (3 ml) by alternating freezing and thawing three times. Subsequently, a plaque assay was performed on 293 cells to measure the infectious particles formed (plaque forming units/ml (pfu/ml)). The results are shown in Figure 15. The results of the plaque assay showed that dl520 replicated in YB-1 nuclear-positive cells (257RDB and 181RDB) similarly to wild-type adenovirus. Thus, when using the adenoviruses described herein according to the present invention, a replication efficiency similar to that of a wild-type adenovirus can be observed. the
实施例11:腺病毒载体Xvir03的结构设计 Example 11: Structural Design of Adenoviral Vector Xvir03
图16显示了腺病毒载体Xvir03的结构设计。腺病毒Xvir03是一种所谓的E1/E3-缺失的腺病毒。这意味着不能制备在腺病毒复制中起作用的E1A、E1B和E3蛋白。E1区域的缺失从342扩展至3528;氨基酸位点27865-30995的E3区域缺失。如本文所示,术语“E1-缺失的病毒”是指E1不再有功能活性的病毒。这可以通过失活另外大部分完整的核酸和氨基酸序列而实现,然而这也可以意指具有不同大小的编码E1区域蛋白的缺失。因为缺乏E1A和E1B蛋白和编码它们的核酸,E4区域(如E4orf6) 仅微弱表达(与野生型腺病毒相比约1-5%)或根本不表达。病毒基因E1B55k和E4orf6通过引入Xvir03的异源CMV启动子(Clontech:PlasmidpShuttle)在E1区域中表达。代替CMV启动子,可以使用与E1A表达相关的本文公开的各种和任何启动子。两个基因的可读框通过所谓的IRES序列(英文是internal ribosomal entry site,内部核糖体进入位点)(Pelletier,J.和Sonenberg,N.Nature,1 988,334,320-325)彼此连接。该元件(Novagen:pCITE)提供了来自1个mRNA的2个蛋白的表达。 Figure 16 shows the structural design of the adenoviral vector Xvir03. Adenovirus Xvir03 is a so-called E1/E3-deleted adenovirus. This means that the E1A, E1B and E3 proteins that function in adenovirus replication cannot be produced. The deletion of the El region extended from 342 to 3528; the E3 region was deleted at amino acid positions 27865-30995. As used herein, the term "E1-deleted virus" refers to a virus in which El is no longer functionally active. This can be achieved by inactivating an otherwise largely intact nucleic acid and amino acid sequence, however this can also mean deletions of proteins encoding the E1 region with different sizes. Because of the absence of the E1A and E1B proteins and the nucleic acids encoding them, the E4 region (such as E4orf6) is only weakly expressed (approximately 1-5% compared to wild-type adenovirus) or not expressed at all. Viral genes E1B55k and E4orf6 were expressed in the El region by introducing a heterologous CMV promoter (Clontech: PlasmidpShuttle) into Xvir03. Instead of the CMV promoter, various and any promoters disclosed herein that are relevant to ElA expression can be used. The open reading frames of the two genes are linked to each other by a so-called IRES sequence (internal ribosomal entry site in English) (Pelletier, J. and Sonenberg, N. Nature, 1 988, 334, 320-325) . This element (Novagen: pCITE) provides expression of 2 proteins from 1 mRNA. the
如下制备载体: Prepare the vector as follows:
通过将来自M.Dobelstein(University of Marburg)的pCGNE1B的E1B55k可读框用XbaI和BfrI克隆到Clontech的pShuttle载体中来产生质粒E1B55k-pShuttle。随后,用ApaI将pShuttle中的E1B55k线性化,末端补平并用NheI剪切。 Plasmid E1B55k-pShuttle was generated by cloning the E1B55k open reading frame of pCGNE1B from M. Dobelstein (University of Marburg) with XbaI and BfrI into Clontech's pShuttle vector. Subsequently, E1B55k in pShuttle was linearized with Apal, blunt-ended and cut with NheI. the
在第二个载体pcDNA3.1(+)(Invitrogen)中,彼此连续地,使用Novagen公司的pCITE-4a(+)作为模板,通过TA克隆将作为PCR产物的IRES元件克隆到EcoRV剪切位点,借助BamHI克隆来自质粒pCMV-E4orf6(M.Dobelstein,University of Marburg)的E4orf6=IRES-E4orf6-pcDNA3.1(+)。用NotI线性化pcDNA3.1(+)中的IRES-E4orf6,末端补平,随后用NheI切掉片段IRES-E4orf6。用开放的载体E1B55k-pShuttle(平端,NheI)连接片段IRES-E4orf6。随后用I-Ceu I和PI-SceI,从E1B55k-IRES-E4orf6-pShuttle和CMV启动子以及牛生长激素(BGH)-PolyA中将盒克隆到ΔE1、ΔE3 Adeno-X-质粒(Clontech)中,其称为AdcmvE1B/IRES/E4orf6。随后,按照制造商的使用说明(Clontech)制备腺病毒。将用PacI线性化的含有表达元件CMV-E1B55k-IRES-E4orf6-BGH polyA的腺质粒转染至HEK293细胞中,转染后11天,与培养基一起去除脱离的细胞,以便通过反复冻融循环释放腺病毒。 In the second vector, pcDNA3.1(+) (Invitrogen), consecutive to each other, the IRES element as a PCR product was cloned into the EcoRV cleavage site by TA cloning using pCITE-4a(+) from Novagen as a template , E4orf6=IRES-E4orf6-pcDNA3.1(+) from plasmid pCMV-E4orf6 (M. Dobelstein, University of Marburg) was cloned by means of BamHI. IRES-E4orf6 in pcDNA3.1(+) was linearized with NotI, blunted at the ends, and then the fragment IRES-E4orf6 was excised with NheI. The fragment IRES-E4orf6 was ligated with the open vector E1B55k-pShuttle (blunt end, NheI). Cassettes were subsequently cloned into ΔE1, ΔE3 Adeno-X-plasmids (Clontech) from E1B55k-IRES-E4orf6-pShuttle and CMV promoters and bovine growth hormone (BGH)-PolyA using I-Ceu I and PI-SceI, It is called AdcmvE1B/IRES/E4orf6. Subsequently, adenovirus was prepared according to the manufacturer's instructions (Clontech). An adenoplasmic plasmid containing the expression element CMV-E1B55k-IRES-E4orf6-BGH polyA linearized with PacI was transfected into HEK293 cells, and 11 days after transfection, the detached cells were removed together with the culture medium to allow for repeated freeze-thaw cycles Release the adenovirus. the
上述载体原则上适合本文所述根据本发明使用的其它病毒。特别是上述载体适合在细胞中复制和引发裂解,所述细胞分别为YB-1核-阳性的细胞以及其中YB-1被去调节(即与正常细胞和非肿瘤细胞相比过量表达)的细胞。该载体的使用特别适用于那些疾病和患者组或患者集体,其与在本文中描述根据本发明使用的其它腺病毒和本发明公开的其它腺病毒一 起公开。 The vectors described above are in principle suitable for the other viruses described herein for use according to the invention. In particular the above-mentioned vectors are suitable for replicating and inducing lysis in cells which are YB-1 nuclear-positive cells and cells in which YB-1 is deregulated (i.e. overexpressed compared to normal cells and non-tumor cells), respectively . The use of this vector is particularly applicable to those diseases and patient groups or patient populations disclosed together with other adenoviruses described herein for use according to the invention and other adenoviruses disclosed herein. the
实施例12:腺病毒载体Xvir03/01的结构设计 Example 12: Structural Design of Adenovirus Vector Xvir03/01
如从图17中可以获得,Xvir03/01是Xvir03的进一步的发展。治疗基因(例如本文所述的基因)和转基因可以克隆到E3区域。另外,将缺失引入E4区域,以便避免与来自Xvir03表达盒的E4orf6发生同源重组。这使较大的转基因可以克隆到该构建体中。缺失的E3区域包含用于引入盒的SacI,NdeI和NheI限制位点,例如其中可以克隆治疗的转基因。 As can be obtained from Figure 17, Xvir03/01 is a further development of Xvir03. Therapeutic genes (such as those described herein) and transgenes can be cloned into the E3 region. Additionally, a deletion was introduced in the E4 region in order to avoid homologous recombination with E4orf6 from the Xvir03 expression cassette. This allows larger transgenes to be cloned into the construct. The deleted E3 region contains SacI, NdeI and NheI restriction sites for the introduction of cassettes, such as where therapeutic transgenes can be cloned. the
制备质粒,它用于将治疗基因克隆到E3区域中以及用于在E4区域中产生缺失: Preparation of plasmids for cloning therapeutic genes into the E3 region and for making deletions in the E4 region:
Clontech的pAdenoX-Plasmid在野生型腺病毒中缺乏的3’ITR区之后具有针对SfuI的限制位点。使用SpeI(位点23644)和SfuI从pAdenoX(Clontech)中获得E3-E4区域,并转移至pcDNA3.1(+)(Invitrogen)=pcDNA3.1-E3Δ27865-30995-E4。通过PstI去除E4ORF6的大部分,即33241-33875=pcDNA3.1-E3Δ27865-30995,E4Δ33241-33875。为了进一步开发Xvir03,用SfuI和SpeI从pcDNA3.1-E3Δ27865-30995,E4Δ33241-33875中将缺失的E3/E4区域克隆到质粒pAdenoX中=pAdenoX E3Δ27865-30995,E4Δ33241-33875。 Clontech's pAdenoX-Plasmid has a restriction site for SfuI after the 3'ITR region that is absent in wild-type adenovirus. The E3-E4 region was obtained from pAdenoX (Clontech) using SpeI (site 23644) and SfuI and transferred to pcDNA3.1(+) (Invitrogen) = pcDNA3.1-E3Δ27865-30995-E4. Most of E4ORF6 was removed by PstI, ie 33241-33875=pcDNA3.1-E3Δ27865-30995, E4Δ33241-33875. For further development of Xvir03, the deleted E3/E4 region was cloned from pcDNA3.1-E3Δ27865-30995, E4Δ33241-33875 into plasmid pAdenoX with SfuI and SpeI=pAdenoX E3Δ27865-30995, E4Δ33241-33875. the
如关于Xvir03所述,随后用I-Ceu I和PI-SceI从E1B55k-IRES-E4orf6-pShuttle中将表达盒连同CMV启动子和牛生长激素(BGH)-PolyA克隆到pAdenoX E3Δ27865-30995,E4Δ33241-33875中,其称为AdcmvE1B/IRES/E4orf6-ΔE4。随后,按照制造商的使用说明(Clontech)制备腺病毒。 The expression cassette was subsequently cloned from E1B55k-IRES-E4orf6-pShuttle with CMV promoter and bovine growth hormone (BGH)-PolyA with I-Ceu I and PI-SceI into pAdenoX E3Δ27865-30995, E4Δ33241-33875 as described for Xvir03 In , it is called AdcmvE1B/IRES/E4orf6-ΔE4. Subsequently, adenovirus was prepared according to the manufacturer's instructions (Clontech). the
上述载体原则上与本文所述根据本发明使用的其它病毒一样有用。特别是上述载体适合在细胞中复制和导致裂解,所述细胞为YB-1核-阳性的细胞以及其中YB-1被去调节(即与正常细胞和非肿瘤细胞相比过量表达)的细胞。该载体还可以用于那些疾病和患者组和患者集体,其关于根据本发明使用的其它腺病毒和根据本发明的腺病毒在本文中公开。 The vectors described above are in principle as useful as the other viruses described herein for use according to the invention. In particular the vectors described above are suitable for replicating and causing lysis in cells that are YB-1 nuclear-positive as well as cells in which YB-1 is deregulated (ie overexpressed compared to normal cells and non-neoplastic cells). This vector can also be used in those diseases and patient groups and patient collectives which are disclosed herein with respect to other adenoviruses used according to the invention and adenoviruses according to the invention. the
实施例13:Xvir03在257RDB和181RDB细胞中的肿瘤消解作用 Example 13: The effect of Xvir03 on tumor digestion in 257RDB and 181RDB cells
在具有6个孔的平板(6孔平板)的每孔中接种100,000个细胞(257RDB和181RDB)。次日,如图18所示,用Ad312(20pfu/细胞)和Xvir03(5pfu/细胞)感染细胞。在500μl无血清DMEM培养基中在37℃下感染1小时。随后,去除感染培养基,并用2ml完全培养基(10%FCS/DMEM)替代。5天后通过结晶紫染色完成分析。结果在图18A和18B中表示。 100,000 cells (257RDB and 181RDB) were seeded in each well of a plate with 6 wells (6-well plate). The next day, as shown in Figure 18, cells were infected with Ad312 (20 pfu/cell) and Xvir03 (5 pfu/cell). Infect in 500 μl serum-free DMEM medium for 1 h at 37 °C. Subsequently, the infection medium was removed and replaced with 2 ml of complete medium (10% FCS/DMEM). Analysis was completed after 5 days by crystal violet staining. The results are shown in Figures 18A and 18B. the
如可以从图18A和18B中获得,在感染Ad312和Xvir03以后,仅在Xvir03的情形中,在核内含有YB-1的多药抗性的细胞显示了裂解,如细胞的结晶紫染色所示。与其相关,首先去除培养基。随后,用结晶紫(50%ETOH,3%甲醛,5%乙酸,1%结晶紫)覆盖细胞,在室温下孵育5-10分钟。随后,用水充分漂洗6孔平板并在室温下干燥。 As can be obtained from Figures 18A and 18B, after infection with Ad312 and Xvir03, and only in the case of Xvir03, multidrug-resistant cells containing YB-1 in the nucleus showed lysis, as indicated by crystal violet staining of the cells . In relation thereto, the culture medium is removed first. Subsequently, cells were covered with crystal violet (50% ETOH, 3% formaldehyde, 5% acetic acid, 1% crystal violet) and incubated at room temperature for 5-10 minutes. Subsequently, the 6-well plate was rinsed well with water and dried at room temperature. the
本发明的发明人已知E1A-缺失的病毒(例如Ad312),然而其在本发明的意义上不是反式激活腺病毒,可能在较高MOI下非常有效地复制(Nevins J.R.,Cell 26,213-220,1981),但是不能在临床应用中实现。该现象在文献中称为“类E1A活性”。本文所用的腺病毒Ad3 12是E1A-缺失的病毒。在所用效价(20 pfu/细胞)下,该效价仍高于临床理想效价,早期腺病毒基因如E1B55k和E4orf6不表达或只能极少量地表达(Nevins J.R.,Cell 26,213-220,1981)。如本文已经描述,这些基因和蛋白在病毒复制中起重要作用。与其相反,这些基因和蛋白分别由腺病毒Xvir03表达(图16)。如从图18A和18B中可以获得,在伴随所需的较低的感染效价下(表达为pfu/细胞)基因E1B55k和E4orf6的表达将导致有效的病毒复制和细胞裂解。这证实了构成本发明基础的发现,即E4orf6和E1B-55K(和缺少E1A)的表达结合YB-1的核定位能够诱导非常有效的腺病毒复制。其所需仅1-5 pfu/细胞的效价现在能临床应用。 The inventors of the present invention have known E1A-deleted viruses (such as Ad312), which however are not transactivating adenoviruses in the sense of the present invention, may replicate very efficiently at higher MOIs (Nevins J.R., Cell 26, 213 -220, 1981), but cannot be implemented in clinical applications. This phenomenon is referred to in the literature as "E1A-like activity". The adenovirus Ad312 used herein is an E1A-deleted virus. At the titer used (20 pfu/cell), the titer is still higher than the clinical ideal titer, and early adenovirus genes such as E1B55k and E4orf6 are not expressed or can only be expressed in a very small amount (Nevins J.R., Cell 26, 213-220 , 1981). As already described herein, these genes and proteins play an important role in viral replication. In contrast, these genes and proteins were expressed by adenovirus Xvir03, respectively (Fig. 16). As can be obtained from Figures 18A and 18B, expression of the genes E1B55k and E4orf6 will result in efficient viral replication and cell lysis with concomitantly required lower infection titers (expressed as pfu/cell). This confirms the discovery underlying the present invention that expression of E4orf6 and E1B-55K (and lack of E1A) combined with nuclear localization of YB-1 can induce very efficient adenovirus replication. Its required titer of only 1-5 pfu/cell is now clinically applicable. the
这证实了构成本发明基础的发现,即为了使根据本发明使用的病毒裂解感染的细胞,YB-1在核内的存在,特别是独立于细胞周期的存在,是必需的。 This confirms the finding that forms the basis of the present invention that the presence of YB-1 in the nucleus, in particular independent of the cell cycle, is necessary for the viruses used according to the invention to lyse infected cells. the
实施例14:腺病毒Ad312的E2基因表达的RNA印迹分析 Example 14: Northern blot analysis of E2 gene expression of adenovirus Ad312
在每种情况下,将100万A549和U2OS细胞接种到10cm Petri盘中。 次日,用Ad312(50pfu/细胞)和Adwt(作为对照,5pfu/细胞)感染细胞。使用的Ad312的高病毒效价导致肿瘤细胞中的独立于E1的复制。在1-2 ml无血清的DMEM培养基中在37℃感染1小时。随后,去除感染培养基,替换为10ml完全培养基(10%FCS/DMEM)。3天后,分离RNA。随后,在光度计中在260nm检测分离的RNA的浓度。然后,在0.8%甲醛琼脂糖凝胶中电泳分离RNA样品。随后,将RNA印迹在尼龙膜上(根据Schleicher&Schuell的系统进行)。将印迹在膜上的RNA对“早期探针”E2和“晚期探针”E2杂交。1501bp的“晚期探针”能特异性地结合E2晚期启动子。之前通过PCR(引物:5’-GTC GGA GAT CAG ATC CGC GT(SEQ.ID.NO.4),5’-GAT CCT CGT CGT CTT CGC TT(SEQ.ID.NO.5))制备探针,并使用32P放射性地标记。相反地,早期探针能结合在E2-早期启动子和E2-晚期启动子之间(位置:226791-227002),且也是借助于PCR(引物:5’-AGCTGATCTTCGCTTTTG(SEQ.ID.NO.6),5’-GGATAGCAAGACTCTGAC AAAG(SEQ.ID.NO.7))产生。随后,洗涤膜并曝光于胶片。 In each case, 1 million A549 and U2OS cells were seeded into 10 cm Petri dishes. The next day, cells were infected with Ad312 (50 pfu/cell) and Adwt (as a control, 5 pfu/cell). The high viral titers of Ad312 used resulted in El-independent replication in tumor cells. Infect in 1-2 ml serum-free DMEM medium for 1 hour at 37°C. Subsequently, the infection medium was removed and replaced with 10 ml of complete medium (10% FCS/DMEM). After 3 days, RNA was isolated. Subsequently, the concentration of isolated RNA was detected in a luminometer at 260 nm. Then, the RNA samples were separated by electrophoresis in a 0.8% formaldehyde agarose gel. Subsequently, the RNA was blotted on a nylon membrane (performed according to the system of Schleicher & Schuell). The RNA blotted on the membrane was hybridized to "early probe" E2 and "late probe" E2. The 1501bp "late probe" can specifically bind to the E2 late promoter. Probes were previously prepared by PCR (primers: 5'-GTC GGA GAT CAG ATC CGC GT (SEQ.ID.NO.4), 5'-GAT CCT CGT CGT CTT CGC TT (SEQ.ID.NO.5)), and radioactively labeled with 32 P. On the contrary, the early probe can bind between the E2-early promoter and the E2-late promoter (position: 226791-227002), and also by means of PCR (primer: 5'-AGCTGATCTTCGCTTTTG (SEQ.ID.NO.6 ), 5'-GGATAGCAAGACTCTGAC AAAG (SEQ.ID.NO.7)) produced. Subsequently, the membrane is washed and exposed to film.
结果在图19中表示。早期和晚期探针都提供了野生型腺病毒对照感染的特异性信号,而感染了Ad312的肿瘤细胞仅仅提供了当使用晚期探针时的特异性信号。这证实了构成本发明基础的发现,即E4orf6和E1B55K的表达以及E1A的缺失分别将过量表达的和去调节的YB-1转运至核中,并由此诱导作为有效的腺病毒复制的先决条件的E2基因的表达。实施例15:腺病毒Adδ24的E2基因表达的RNA印迹分析 The results are shown in FIG. 19 . Both early and late probes provided specific signals for wild-type adenovirus control infection, whereas Ad312-infected tumor cells only provided specific signals when late probes were used. This confirms the finding that underlies the present invention that expression of E4orf6 and E1B55K and deletion of E1A transports overexpressed and deregulated YB-1, respectively, into the nucleus and thereby induces a prerequisite for efficient adenoviral replication Expression of the E2 gene. Example 15: Northern blot analysis of E2 gene expression of adenovirus Adδ24
在每种情况下,将100万U2OS细胞接种到10cm Petri盘中。次日,用腺病毒δ24(Adδ24)(10pfu/细胞)和野生型腺病毒(Adwt)(作为对照,10pfu/细胞)感染细胞。使用的重组腺病毒Adδ24(Fueyo,J.等,Oncogene 19,2-12,2000)具有在E1A蛋白的CR2区的特异性缺失,因而仅能在Rb-阴性的肿瘤中复制。另外,该病毒能表达比得上野生型腺病毒的基因E1B55k和E4orf6。在1-2ml无血清的DMEM培养基中在37℃感染1小时。随后,去除感染培养基,替换为10ml完全培养基(10%FCS/DMEM)。12和24小时后,分离RNA。随后,在光度计中在260nm检测分离的RNA的浓 度。然后,在0.8%甲醛琼脂糖凝胶中电泳分离RNA样品。随后,将RNA印迹在尼龙膜上(根据Schleicher&Schuell的系统进行)。将印迹在膜上的RNA对“早期探针”和“晚期探针”杂交。包含1501bp的“晚期探针”能特异性地结合E2晚期启动子。之前通过PCR(引物:5’-GTC GGA GAT CAGATC CGC GT(SEQ.ID.NO.4),5’-GAT CCT CGT CGT CTT CGC TT(SEQ.ID.NO.5))制备探针,并使用32P放射性地标记。但是,早期探针能结合在E2-早期启动子和E2-晚期启动子之间,且也是借助于PCR(引物:5’-AGCTGATCTTCGCTTTTG(SEQ.ID.NO.6),5’-GGATAGCAAGACTCTGAC AAAG(SEQ.ID.NO.7))产生。随后,洗涤膜并曝光于胶片。 In each case, 1 million U2OS cells were seeded into 10 cm Petri dishes. The next day, cells were infected with adenovirus delta 24 (Adδ24) (10 pfu/cell) and wild-type adenovirus (Adwt) (as a control, 10 pfu/cell). The recombinant adenovirus Adδ24 used (Fueyo, J. et al., Oncogene 19, 2-12, 2000) has a specific deletion in the CR2 region of the E1A protein and thus can only replicate in Rb-negative tumors. In addition, the virus expresses genes E1B55k and E4orf6 comparable to wild-type adenovirus. Infect in 1-2 ml serum-free DMEM medium for 1 hour at 37°C. Subsequently, the infection medium was removed and replaced with 10 ml of complete medium (10% FCS/DMEM). After 12 and 24 hours, RNA was isolated. Subsequently, the concentration of isolated RNA was detected in a luminometer at 260 nm. Then, the RNA samples were separated by electrophoresis in a 0.8% formaldehyde agarose gel. Subsequently, the RNA was blotted on a nylon membrane (performed according to the system of Schleicher & Schuell). The RNA blotted on the membrane was hybridized to "early probe" and "late probe". The "late probe" comprising 1501 bp specifically binds to the E2 late promoter. Probes were prepared by PCR (primers: 5'-GTC GGA GAT CAGATC CGC GT (SEQ.ID.NO.4), 5'-GAT CCT CGT CGT CTT CGC TT (SEQ.ID.NO.5)) before, and Radioactively labeled with 32 P. However, the early probe can be combined between the E2-early promoter and the E2-late promoter, and also by means of PCR (primers: 5'-AGCTGATCTTCGCTTTTG (SEQ.ID.NO.6), 5'-GGATAGCAAGACTCTGAC AAAG( SEQ.ID.NO.7)) produced. Subsequently, the membrane is washed and exposed to film.
结果在图20中表示。 The results are shown in Figure 20. the
12小时后,仅有晚期探针提供了特异性信号。24小时后,仅有早期探针在感染了Adδ24的细胞中提供了特异性信号。但是,与野生型腺病毒相比,信号显著减弱。该结果还证实了构成本发明基础的发现,即E4orf6和E1B-55K的表达分别将过表达的和去调节的YB-1转运至核中,其随后结合到E2-晚期启动子并诱导E2基因表达。 After 12 hours, only the late probe provided a specific signal. After 24 hours, only the early probe provided a specific signal in cells infected with Adδ24. However, the signal was significantly attenuated compared to wild-type adenovirus. This result also confirms the finding underlying the present invention that expression of E4orf6 and E1B-55K transports overexpressed and deregulated YB-1, respectively, into the nucleus where it subsequently binds to the E2-late promoter and induces the E2 gene Express. the
实施例16:腺病毒载体XvirPSJL1和XvirPSJL2的结构设计 Example 16: Structural Design of Adenoviral Vectors XvirPSJL1 and XvirPSJL2
载体描述:XvirPSJL组载体是本文中称作I组腺病毒的病毒的实施方案,并分别通过载体和腺病毒XvirPSJL1和XvirPSJL2示例,它们不但能象腺病毒dl520那样在YB-1核-阳性的细胞、特别是肿瘤细胞中复制,而且能在肿瘤细胞中复制,所述肿瘤细胞中的YB-1分别是过表达的和去调节的。尽管病毒基因E1B55k和E4orf6仅仅分别在E1B启动子和E4启动子影响下在dl520感染的YB-1核-阳性的细胞中表达,XvirPSJL中的E1B55k和E4orf6借助于巨细胞病毒(cmw)启动子进行表达。但是,不只是cmw启动子,还可以使用其它的启动子、特别是肿瘤特异性的、组织特异性的和器官特异性的启动子。由于E1B55k和E4orf6的表达,过表达的YB-1和去调节的YB-1被分别转送到核内,并启动腺病毒的复制。如本文所述的XvirPSJL组的腺病毒载体从而结合在同一个载体中的腺病毒载体dl520、Xvir03和AdYB-1的各种元件和因此它们的功能。与载体dl520 类似,XvirPSJL病毒含有E1A12S基因。该基因和相应的基因产物分别负责诱导感染的细胞的S期,并促进病毒的复制、化疗和辐照的作用。象Xvir03一样,XvirPSJL病毒含有表达盒CMV-E 1B55k/IRES/E4orf6,它为有效的复制所需,并间接地或直接地将去调节的YB-1转送到核中,该核优选地包含在肿瘤细胞中。因而,复制仅能在YB-1是过表达的或去调节的细胞、特别是肿瘤细胞中。另外,用E1B55k/E4orf6复合体降解P53。编码人转录因子YB-1的序列取自病毒AdYB-1。内源的,即已经存在细胞中的YB-1扩大了病毒的复制。E1A12S和YB-1的表达由依赖于YB-1的腺病毒E2-晚期启动子控制。还相关地,可以使用特异性的启动子,特别是肿瘤特异性的、组织特异性的或器官特异性的启动子。这些病毒的另一个特征是缺失E4区。载体含有限制位点,在腺病毒载体XvirPSJL1和XvirPSJL2的情况下,通过这些位点可以表达说明书中公开的各种转基因,例如核酶、反义分子、siRNA、细胞凋亡诱导基因、细胞因子和前药基因。它们的表达还可以通过说明书中公开的肿瘤特异性的、组织特异性的或器官特异性的启动子控制。表达盒的定位不是固定的,特别是不关于或在E1、E3和E4区内,但是可以以任何方式排列。载体的复制独立于p53或肿瘤细胞的Rb状况。 Vector Description: Vectors of the XvirPSJL group are embodiments of viruses referred to herein as group I adenoviruses, and are exemplified by the vectors and adenoviruses XvirPSJL1 and XvirPSJL2, respectively, which not only are capable of infecting YB-1 nucleus-positive cells like adenovirus dl520 , especially in tumor cells, and can replicate in tumor cells, and YB-1 in said tumor cells is overexpressed and deregulated respectively. Whereas the viral genes E1B55k and E4orf6 were only expressed under the influence of the E1B promoter and E4 promoter, respectively, in dl520-infected YB-1 nuclear-positive cells, E1B55k and E4orf6 in XvirPSJL were expressed via the cytomegalovirus (cmw) promoter. Express. However, not only the cmw promoter, but also other promoters, in particular tumor-specific, tissue-specific and organ-specific promoters, can be used. Due to the expression of E1B55k and E4orf6, overexpressed YB-1 and deregulated YB-1 were translocated into the nucleus, respectively, and initiated the replication of adenovirus. The adenoviral vectors of the XvirPSJL group as described herein thus combine the various elements and thus their functions of the adenoviral vectors dl520, Xvir03 and AdYB-1 in the same vector. Similar to the vector dl520, the XvirPSJL virus contains the E1A12S gene. This gene and the corresponding gene product are responsible for inducing the S phase of infected cells and promoting the replication of the virus, the effects of chemotherapy and irradiation, respectively. Like Xvir03, the XvirPSJL virus contains the expression cassette CMV-E 1B55k/IRES/E4orf6, which is required for efficient replication and indirectly or directly transfers deregulated YB-1 to the nucleus, which is preferably contained in in tumor cells. Thus, replication is only possible in cells, especially tumor cells, in which YB-1 is overexpressed or deregulated. Additionally, P53 is degraded by the E1B55k/E4orf6 complex. The sequence encoding human transcription factor YB-1 was taken from the virus AdYB-1. Endogenous, ie, YB-1 already present in the cell amplifies viral replication. Expression of E1A12S and YB-1 is controlled by the YB-1-dependent adenoviral E2-late promoter. Also related, specific promoters, especially tumor-specific, tissue-specific or organ-specific promoters may be used. Another characteristic of these viruses is the deletion of the E4 region. The vectors contain restriction sites through which, in the case of the adenoviral vectors XvirPSJL1 and XvirPSJL2, the various transgenes disclosed in the specification can be expressed, such as ribozymes, antisense molecules, siRNA, apoptosis-inducing genes, cytokines and prodrug genes. Their expression can also be controlled by the tumor-specific, tissue-specific or organ-specific promoters disclosed in the specification. The positioning of the expression cassettes is not fixed, in particular not about or within the El, E3 and E4 regions, but can be arranged in any way. Vector replication is independent of p53 or the Rb status of tumor cells. the
重组腺病毒XvirPSJL1和XvirPSJL2的结构设计如图21和22所示。 The structural designs of the recombinant adenoviruses XvirPSJL1 and XvirPSJL2 are shown in Figures 21 and 22. the
盒E2-晚期-YB1IRES/12S的产生: Generation of cassette E2-late-YB1IRES/12S:
Clontech/BD Biosciences的pAdenoX质粒用作本文的原料,其包含腺病毒Ad5的基因组核酸,并具有在3’ITR区(野生型腺病毒没有)后面具有SfuI限制性位点。使用SpeI(位点23644)和来自pAdenoX(Clontech)SfuI将E3-E4区域转移至pcDNA3.1(+)(Invitrogen),并表示为pcDNA3.1-E3Δ27865-30995-E4。通过PstI去除E4ORF6的大部分,即碱基33241-33875。这样得到的片段称作pcDNA3.1-E3Δ27865-30995,E4Δ33241-33875。 The pAdenoX plasmid from Clontech/BD Biosciences, used as starting material herein, contains the genomic nucleic acid of the adenovirus Ad5 and has an SfuI restriction site behind the 3' ITR region (which wild-type adenovirus does not have). The E3-E4 region was transferred to pcDNA3.1(+) (Invitrogen) using SpeI (site 23644) and SfuI from pAdenoX (Clontech) and denoted as pcDNA3.1-E3Δ27865-30995-E4. Most of E4ORF6, bases 33241-33875, was removed by PstI. The fragments thus obtained are called pcDNA3.1-E3Δ27865-30995, E4Δ33241-33875. the
用SacI和NheI将E2-晚期启动子从pGL3-EGFP中分离(Holm等,JBC2002,277,10427-10434), 并克隆进pcDNA3.1-E3Δ27865-30995,E4Δ33241-33875中。在此过程中,进一步在碱基的Δ27593-3 1509区域删 除E3区。这样得到的片段称作E2-晚期-pcDNA3.1-E3Δ27593-31509,E4Δ33241-33875。 The E2-late promoter was isolated from pGL3-EGFP with SacI and NheI (Holm et al., JBC2002, 277, 10427-10434) and cloned into pcDNA3.1-E3Δ27865-30995, E4Δ33241-33875. During this process, the E3 region was further deleted in the Δ27593-31509 region of bases. The fragment thus obtained is called E2-late-pcDNA3.1-E3Δ27593-31509, E4Δ33241-33875. the
借助RT-PCR生成用于E1A-243AA产物的cDNA,分离,检查序列,并使用BamHI和EcoRI克隆进pcDNA3.1(+)载体(Invitrogen)。用NheI和BamHI使E1A-12S-pcDNA3.1+线性化,通过T4聚合酶补平末端,通过Taq聚合酶和dTTP提供T突出端。将IRES元件作为PCR产物(模板=pCITE,Novagen)克隆进E1A-12S-pcDNA 3.1(+)载体(TA克隆策略)。 cDNA for the E1A-243AA product was generated by RT-PCR, isolated, sequence checked, and cloned into pcDNA3.1(+) vector (Invitrogen) using BamHI and EcoRI. E1A-12S-pcDNA3.1+ was linearized with NheI and BamHI, the ends were blunt-ended by T4 polymerase, and T-overhangs were provided by Taq polymerase and dTTP. The IRES element was cloned as a PCR product (template = pCITE, Novagen) into the E1A-12S-pcDNA 3.1(+) vector (TA cloning strategy). the
从载体pHVad2c分离出YB-1-EcoRI片段(Holm等,JBC 2002,277,10427-10434),并补平末端。用XbaI使载体pShuttle(市场上买自BDBiosciences)线性化,补平末端,去磷酸化,连接到先前生成的编码YB-1的核酸上。这样得到的载体称作YB-1-pShuttle。向pShuttle载体的克隆会提供编码YB-1片段的核酸,其带有框架内的终止密码子。借助于NheI和BfrI,将编码YB-1的核酸从YB-1-pShuttle克隆进pcDNA3.1(+)中的载体IRES-E1A-12S。这样得到的载体称作YB-1(带有终止密码子的EcoRI-EcoRI)-IRES-E1 A-12S-pcDNA3.1(+)。 The YB-1-EcoRI fragment (Holm et al., JBC 2002, 277, 10427-10434) was isolated from the vector pHVad2c and blunt-ended. Vector pShuttle (commercially available from BD Biosciences) was linearized with XbaI, blunt-ended, dephosphorylated, and ligated to a previously generated nucleic acid encoding YB-1. The vector thus obtained was named YB-1-pShuttle. Cloning into the pShuttle vector will provide nucleic acid encoding the YB-1 fragment with an in-frame stop codon. The nucleic acid encoding YB-1 was cloned from YB-1-pShuttle into the vector IRES-E1A-12S in pcDNA3.1(+) with the aid of NheI and BfrI. The vector thus obtained was called YB-1 (EcoRI-EcoRI with stop codon)-IRES-E1A-12S-pcDNA3.1(+). the
随后,用PmeI切割盒YB-1-IRES-E1A12S,克隆进NheI线性化的、平端的且去磷酸化的载体E2晚期-pcDNA3.1E3Δ27593-31509,E4Δ33241-33875中。这样,第二个盒就在E3区的缺失区中。 Subsequently, the cassette YB-1-IRES-E1A12S was cut with PmeI and cloned into the NheI linearized, blunt-ended and dephosphorylated vector E2 late-pcDNA3.1E3Δ27593-31509, E4Δ33241-33875. Thus, the second cassette is in the deleted region of the E3 region. the
转基因盒包含核酸构建体E2晚期-YB-1-IRES-E1A12S,通过SfuI和SpeI,将其与残余腺病毒序列E3Δ27593-31509,E4Δ33241-33875一起克隆进Clontech的载体pAdenoX(=AdenoX/E2晚期-YB-1-IRES-E1A12S/E3Δ27593-31509,E4Δ33241-33875)。 The transgene cassette comprises the nucleic acid construct E2 late stage-YB-1-IRES-E1A12S, which is cloned into Clontech's vector pAdenoX (=AdenoX/E2 late stage- YB-1-IRES-E1A12S/E3Δ27593-31509, E4Δ33241-33875). the
通过I-CeuI和PI-SceI,将盒CMV-E1B55k/IRES/E4orf6从上面关于Xvir03所述的pShuttle切割出,并插入载体AdenoX/E2晚期-YB-1-IRES-E1A12S/E3Δ27593-31509,E4Δ33241-33875。 Cassette CMV-E1B55k/IRES/E4orf6 was excised from pShuttle as described above for Xvir03 via I-CeuI and PI-SceI and inserted into the vector AdenoX/E2 Late-YB-1-IRES-E1A12S/E3Δ27593-31509, E4Δ33241 -33875. the
随后,用Pac I线性化载体,转染进293细胞,根据生产商的说明,分别分离不含有图中标记的转基因的重组腺病毒XvirPSJL1和XvirPSJL2。 Subsequently, the vector was linearized with Pac I and transfected into 293 cells. According to the manufacturer's instructions, the recombinant adenoviruses XvirPSJL1 and XvirPSJL2 that did not contain the transgene marked in the figure were isolated respectively. the
实施例17:用腺病毒dl520感染HeLa细胞 Example 17: Infection of HeLa cells with adenovirus dl520
每盘涂布100.000个HeLa细胞。次日,用不同效价(pfu/ml)的腺病毒dl520感染细胞。在500μl无血清的DMEM培养基中在37℃感染1小时。随后,去除感染培养基,并用2ml完全培养基(10%FCS/DMEM)替换。在3-5天后,使用结晶紫染色进行分析。 100.000 HeLa cells were plated per plate. The next day, cells were infected with different titers (pfu/ml) of adenovirus dl520. Infect in 500 μl of serum-free DMEM medium for 1 hour at 37°C. Subsequently, the infection medium was removed and replaced with 2 ml of complete medium (10% FCS/DMEM). After 3-5 days, analysis was performed using crystal violet staining. the
实验结果如图23所示。腺病毒dl520在低MOI(5-10pfu/细胞)感染核中没有YB-1的HeLa细胞时未显示出任何裂解,与此相反,dl520在MOI(感染复数)为100-200pfu/细胞时表现出实际上完全的裂解,并且在MOI为50pfu/细胞时仍然表现出显著裂解。从中可以看出,dl520和类似的能开启腺病毒基因E1B55k和E4orf6的病毒,在较高MOI时适合于直接地或间接地将过表达的或去调节的YB-1转送到核中,并因此诱导细胞裂解。实施例18:用于检测E2-晚期启动子活性的荧光素酶试验 The experimental results are shown in Figure 23. Adenovirus dl520 did not show any lysis at low MOI (5-10 pfu/cell) infecting HeLa cells without YB-1 in the nucleus, in contrast to dl520 at an MOI (multiplicity of infection) of 100-200 pfu/cell Practically complete lysis and still exhibited significant lysis at an MOI of 50 pfu/cell. From this it can be seen that dl520 and similar viruses that switch on the adenoviral genes E1B55k and E4orf6 are suitable at higher MOIs to transport overexpressed or deregulated YB-1 directly or indirectly into the nucleus and thus Induces cell lysis. Example 18: Luciferase assay for detecting E2-late promoter activity
已知YB-1能结合核中的腺病毒2-晚期启动子(Holm等,JBC 2002,277,10427-20434),且该启动子还较好地适用于核酸的表达。腺病毒2-晚期启动子的应用特别地由下述事实推动,即其可以由YB-1控制,其中YB-1作为正效应物起作用,即该启动子只有在核中存在YB-1的情况下才是有活性的。因此当核中不存在分别作为效应物和调节物的YB-1时,可以以高度选择性的方式调节所述的腺病毒E2-晚期启动子,并因此应用于核中存在YB-1的系统中,实际上避免在腺病毒2-晚期启动子控制下的核酸的任何表达。E2-晚期启动子包含3Y-盒(CCAAT),其与E2基因的激活有关。已经制备了不同的E2-晚期启动子构建体,并检测了它们的特异性和活性。如下进行分析。 YB-1 is known to bind to the adenovirus 2-late promoter in the nucleus (Holm et al., JBC 2002, 277, 10427-20434), and this promoter is also well suited for expression of nucleic acids. The use of the adenovirus 2-late promoter is particularly motivated by the fact that it can be controlled by YB-1, which acts as a positive effector, that is, the promoter is only present in the nucleus where YB-1 is present. case is active. The adenoviral E2-late promoter can thus be regulated in a highly selective manner when YB-1 is absent in the nucleus as an effector and regulator, respectively, and thus applies to systems where YB-1 is present in the nucleus In practically any expression of nucleic acids under the control of the adenoviral 2-late promoter is avoided. The E2-late promoter contains a 3Y-box (CCAAT), which is involved in the activation of the E2 gene. Different E2-late promoter constructs have been prepared and tested for their specificity and activity. Analysis is performed as follows. the
使用3种不同的细胞浓度,将核中含有YB-1的细胞系EPG-257RDB(上皮胃癌)、HeLa(上皮子宫颈癌)和U2OS(骨肉瘤)接种到6孔平板中。用次日表现出70%汇合的孔进行转染。对于每个孔,将500ngSpinMiniprep(Qiagen)纯化的在荧光素酶载体(市场上购自Promega,开始质粒:pGL3-增强子)中的不同E2-晚期启动子的质粒DNA加入到在1.5ml带固定帽的反应导管中的500μl OptiMEM,将5μl DOTAP加入到500μl在另一个带固定帽的反应导管中。合并2份溶液,并混合。在室温孵育混合物30分钟,以形成复合体。用PBS洗涤细胞3次,用转染混合物层覆 盖。将平板在37℃孵育5小时,随后再用PBS洗涤细胞3次,并提供完全培养基。 The cell lines EPG-257RDB (epithelial gastric carcinoma), HeLa (epithelial cervical carcinoma) and U2OS (osteosarcoma) containing YB-1 in nuclei were seeded in 6-well plates using 3 different cell concentrations. Wells showing 70% confluence the next day were used for transfection. For each well, 500 ng of Spin Miniprep (Qiagen) purified plasmid DNA of different E2-late promoters in a luciferase vector (commercially available from Promega, starting plasmid: pGL3-enhancer) was added to a 1.5 ml band immobilized 500 μl OptiMEM in the capped reaction tube, 5 μl DOTAP was added to 500 μl in another reaction tube with fixed cap. The 2 solutions were combined and mixed. The mixture was incubated at room temperature for 30 minutes to allow complex formation. Cells were washed 3 times with PBS and covered with a layer of transfection mixture. The plates were incubated at 37°C for 5 hours, after which the cells were washed 3 times with PBS and provided with complete medium. the
感染后48小时,用Promega的荧光素酶分析系统试剂盒(Cat.No.E1500)处理细胞:给每个孔提供一层500μl的裂解缓冲液,在室温10分钟后,用1ml吸管将细胞从平板孔中冲洗出,并转移到1,5ml带固定帽的反应导管中。随后在4℃、14.000rpm离心细胞裂解物15分钟。向每50μl上清液中加入100μl荧光素酶底物,用TopCount(Canberra-PackardGmbH,63303 Dreieich)微板闪烁&荧光计数器在96孔黑平板中在945nm波长检测。 48 hours after infection, the cells were treated with Promega's luciferase assay system kit (Cat.No.E1500): provide each well with a layer of 500 μl lysis buffer, and after 10 minutes at room temperature, use a 1ml pipette to remove the cells from the Plate wells were rinsed out and transferred to 1,5 ml reaction tubes with fixed caps. The cell lysate was then centrifuged at 14.000 rpm for 15 minutes at 4°C. 100 μl of luciferase substrate was added per 50 μl of supernatant and detected at 945 nm in a 96-well black plate with a TopCount (Canberra-Packard GmbH, 63303 Dreieich) microplate scintillation & fluorescence counter. the
用目录号为23227(PIERCE,Rockford,Illinois,USA)的BCA蛋白分析试剂盒在570nm、在生物光度计(BioluminTM 960)动力荧光/吸收平板读数器中检测蛋白的分子动力学。样品的相对光信号被转换成蛋白量(RLU/μg蛋白)。 Molecular dynamics of proteins were measured at 570 nm in a bioluminometer (Biolumin ™ 960) kinetic fluorescence/absorption plate reader using the BCA protein assay kit Cat. No. 23227 (PIERCE, Rockford, Illinois, USA). The relative light signal of the sample was converted to protein amount (RLU/μg protein).
使用下述质粒:用pGL3-增强子(Promega)作为空白读值,用BamHI(2250 bp)和BsaBI(2003 bp)从该pGL3-增强子中去除增强子。借助于限制位点Apa I和Sac I,将各E2启动子构建体克隆进缺失增强子的pGL3载体的MCS中。用Bgl II和Hind III将hCMV启动子克隆进pGL3增强子中,并作为阳性对照。该阳性对照可以评价转染效率,还用作荧光素酶活性的参考值。对于每种细胞系,将CMV对照设定为100%,将E2启动子构建体生成的酶活性与其关联,作出的直方图如图24所示。 The following plasmids were used: pGL3-enhancer (Promega) was used as blank read, from which the enhancer was removed with BamHI (2250 bp) and BsaBI (2003 bp). Each E2 promoter construct was cloned into the MCS of the enhancer-deleted pGL3 vector with the aid of the restriction sites Apa I and Sac I. The hCMV promoter was cloned into the pGL3 enhancer with Bgl II and Hind III and served as a positive control. This positive control allows assessment of transfection efficiency and also serves as a reference value for luciferase activity. For each cell line, the CMV control was set at 100%, and the enzymatic activity produced by the E2 promoter construct was correlated with it, and a histogram was made as shown in FIG. 24 . the
提及的各构建体如下: The constructs mentioned are as follows:
1.包含Y-box I,II和III,对应于碱基25932-26179 bp(关于野生型腺病毒序列,还参见随后提供的腺病毒E2区部分) 1. Contains Y-box I, II and III, corresponding to bases 25932-26179 bp (for the wild-type adenovirus sequence, also refer to the subsequent adenovirus E2 region part)
2.包含Y-box II和III,对应于碱基25932-26127bp(关于野生型腺病毒序列,还参见随后提供的腺病毒E2区部分) 2. Contains Y-box II and III, corresponding to base 25932-26127bp (for the wild-type adenovirus sequence, also refer to the adenovirus E2 region part provided later)
3.包含Y-box III,对应于碱基25932-26004 bp(关于野生型腺病毒序列,还参见随后提供的腺病毒E2区部分) 3. Contains Y-box III, corresponding to base 25932-26004 bp (for the wild-type adenovirus sequence, also refer to the adenovirus E2 region provided later)
4.不含有Y-盒,作为空白读数 4. Does not contain Y-box, read as a blank
腺病毒E2区部分(取自Virology 1992,186,280-285)
Adenovirus E2 region part (taken from
(YB-1结合位点打印为粗体) (YB-1 binding sites are printed in bold)
25561 aggaactttatcctagagcgctcaggaatcttgcccgccacctgctgtgcacttcctagc 25561 aggaactttatcctagagcgctcaggaatcttgcccgccacctgctgtgcacttcctagc
25621 gactttgtgcccattaagtaccgcgaatgccctccgccgctttggggccactgctacctt 25621 gactttgtgcccattaagtaccgcgaatgccctccgccgctttggggccactgctacctt
25681 ctgcagctagccaactaccttgcctaccactctgacataatggaagacgtgagcggtgac 25681 ctgcagctagccaactaccttgcctaccactctgacataatggaagacgtgagcggtgac
25741 ggtctactggagtgtcactgtcgctgcaacctatgcaccccgcaccgctccctggtttgc 25741 ggtctactggagtgtcactgtcgctgcaacctatgcaccccgcaccgctccctggtttgc
25801 aattcgcagctgcttaacgaaagtcaaattatcggtacctttgagctgcagggtccctcg 25801 aattcgcagctgcttaacgaaagtcaaattatcggtacctttgagctgcagggtccctcg
25861 cctgacgaaaagtccgcggctccggggttgaaactcactccggggctgtggacgtcggct 25861 cctgacgaaaagtccgcggctccggggttgaaactcactccggggctgtggacgtcggct
25921 taccttcgcaaatttgtacctgaggactaccacgcccacgagattaggttctacgaaga 25921 taccttcgcaaatttgtacctgaggactaccacgcccacgagattagggttctacgaaga
25981 cccgcccgccaaatgcggagcttaccgcctgcgtcattacccagggccacattctt 25981 cccgcccgccaaatgcggagcttaccgcctgcgtcattacccagggccacattctt
26041 gg tgcaagccatcaacaaagcccgccaagagtttctgctacgaaagggacggggg 26041 gg tgcaagccatcaacaaagcccgccaagagtttctgctacgaaagggacgggggg
26101 gtttacttggacccccagtccggcgaggagctcaac ccccccgccgccgcagccc 26101 gtttacttggacccccagtccggcgaggagctcaac ccccccgccgccgcagccc
26161 tatcagcagcagccgcgggcccttgcttcccaggatggcacccaaaaagaagctgcagct 26161 tatcagcagcagccgcgggcccttgcttcccaggatggcacccaaaaagaagctgcagct
26221 gccgccgccacccacggacgaggaggaatactgggacagtcaggcagaggaggttttgga 26221 gccgccgccacccacggacgaggaggaatactgggacagtcaggcagaggaggttttgga
26281 cgaggaggaggaggacatgatggaagactgggagagcctagacgaggaagcttccgaggt 26281 cgaggaggaggaggacatgatggaagactgggagagcctagacgaggaagcttccgaggt
26341 cgaagaggtgtcagacgaaacaccgtcaccctcggtcgcattcccctcgccggcgcccca 26341 cgaagaggtgtcagacgaaacaccgtcaccctcggtcgcattcccctcgccggcgcccca
26401 gaaatcggcaaccggttccagcatggctacaacctccgctcctcaggcgccgccggcact 26401 gaaatcggcaaccggttccagcatggctacaacctccgctcctcaggcgccgccggcact
26461 gcccgttcgccgacccaaccgtagatgggacaccactggaaccagggccggtaagtccaa 26461 gcccgttcgccgacccaaccgtagatgggacaccactggaaccagggccggtaagtccaa
26521 gcagccgccgccgttagcccaagagcaacaacagcgccaaggctaccgctcatggcgcgg 26521 gcagccgccgccgttagcccaagagcaacaacagcgccaaggctaccgctcatggcgcgg
26581 gcacaagaacgccatagttgcttgcttgcaagactgtgggggcaacatctccttcgcccg 26581 gcacaagaacgccatagttgcttgcttgcaagactgtgggggcaacatctccttcgcccg
26641 ccgctttcttctctaccatcacggcgtggccttcccccgtaacatcctgcattactaccg 26641 ccgctttcttctctaccatcacggcgtggccttcccccgtaacatcctgcattactaccg
26701 tcatctctacagcccatactgcaccggcggcagcggcagcggcagcaacagcagcggcca 26701 tcatctctacagcccatactgcaccggcggcagcggcagcggcagcaacagcagcggcca
26761 cacagaagcaaaggcgaccggatagcaagactctgacaaagcccaagaaatccacagcgg 26761 cacagaagcaaaggcgaccggatagcaagactctgacaaagcccaagaaatccacagcgg
(SEQ.ID.No.8) (SEQ.ID.No.8)
显示在图24中的结果有力地证实了,含有不同E2-晚期/Y-盒的各启动子片段适用于在YB-1核-阳性的肿瘤细胞中表达治疗性的转基因,因而可以用作本发明意义上的启动子。 The results shown in Figure 24 strongly demonstrate that each promoter fragment containing the different E2-late/Y-boxes is suitable for expressing therapeutic transgenes in YB-1 nuclear-positive tumor cells and thus can be used as the present invention. A promoter in the sense of the invention. the
实施例19:腺病毒表达的YB-1对颗粒释放的影响 Example 19: Effect of YB-1 expressed by adenovirus on particle release
用缺失E1/E3的腺病毒载体AdYB-1和仅缺失E1A的Ad312感染人骨肉瘤细胞(U2OS),MOI为50pfu/细胞。AdYB-1在其基因组中含有编码细胞转录因子YB-1的序列,因而表达Y-盒结合蛋白1(YB-1)。为了评价感染后的作为“噬菌斑形成单位”(pfu)的病毒颗粒的释放,在感染后2和5天分别分离培养基上清液或残余的细胞层。通过3个融/冻循环,释放细胞内的颗粒。使用293细胞上的噬菌斑试验分析颗粒数目。 Human osteosarcoma cells (U2OS) were infected with adenoviral vector AdYB-1 with deletion of E1/E3 and Ad312 with deletion of E1A only, MOI was 50pfu/cell. AdYB-1 contains in its genome a sequence encoding the cellular transcription factor YB-1 and thus expresses the Y-box binding protein 1 (YB-1). To evaluate post-infection release of virus particles as "plaque forming units" (pfu), culture supernatants or residual cell layers were isolated 2 and 5 days post-infection, respectively. Through 3 thaw/freeze cycles, the intracellular particles were released. Particle numbers were analyzed using a plaque assay on 293 cells. the
结果如图25所示,其中实条表示细胞内残余的病毒颗粒,而交叉线条表示释放出的细胞外的病毒颗粒。 The results are shown in Figure 25, where the solid bars represent the residual virus particles inside the cells, and the crossed lines represent the released extracellular virus particles. the
图25所示的结果证实了,AdYB-1作为整体会生成比Ad312更多的pfu,并释放出更多的颗粒。5天后,感染了AdYB-1的细胞清楚地表现出与感染了Ad312的细胞相反的细胞病理效应(CPE)。 The results shown in Figure 25 confirm that AdYB-1 as a whole generates more pfu and releases more particles than Ad312. After 5 days, cells infected with AdYB-1 clearly exhibited the opposite cytopathic effect (CPE) to cells infected with Ad312. the
前述说明书公开的本发明的特征,权利要求以及附图可以单独以及任意组合,对于本发明其各种实施方案的实现是重要的。 The features of the invention disclosed in the preceding description, the claims and the drawings are essential for the realization of the invention in its various embodiments both individually and in any combination. the
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| PCT/EP2003/005583 WO2003099859A2 (en) | 2002-05-27 | 2003-05-27 | Novel use of adenoviruses and nucleic acids coding therefor |
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| PT3288573T (en) * | 2015-04-30 | 2020-03-25 | Psioxus Therapeutics Ltd | Oncolytic adenovirus encoding a b7 protein |
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Non-Patent Citations (5)
| Title |
|---|
| Per S. Holm,et al..YB-1 relocates to the nucleus in adenovirus-infected cells and facilitates viral replication by inducing E2 gene expression through the E2 late promoter..The Journal of Biological Chemistry277 12.2002,10427-10434. |
| Per S. Holm,et al..YB-1 relocates to the nucleus in adenovirus-infected cells and facilitates viral replication by inducing E2 gene expression through the E2 late promoter..The Journal of Biological Chemistry277 12.2002,10427-10434. * |
| WO-0170951-A2 2001.09.27 |
| WO-02053711-A2 2002.07.11 |
| WO-9846779-A1 1998.10.22 |
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