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CN1385690A - Biochip analysis instrument - Google Patents

Biochip analysis instrument Download PDF

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CN1385690A
CN1385690A CN 02112040 CN02112040A CN1385690A CN 1385690 A CN1385690 A CN 1385690A CN 02112040 CN02112040 CN 02112040 CN 02112040 A CN02112040 A CN 02112040A CN 1385690 A CN1385690 A CN 1385690A
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light
scanning
biochip
diaphragm
catoptron
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CN1164925C (en
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陆祖康
王立强
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Zhejiang University ZJU
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Abstract

本发明采用二个不同波长光源发出的光,分别经反射镜入射到绕轴往返摆动的振镜,振镜反射出的角度变化的光由扫描物镜转变成线性位移光,并经棱镜转向到生物芯片,实现对生物芯片的一维扫描,另一维扫描是由电机驱动的机械扫描。生物芯片发出的荧光,经棱镜转向到扫描物镜,再经振镜、反射镜、聚光镜,通过共焦光阑小孔到达滤光片,滤去杂散光后由光电探测器转变成电信号。本发明在光源发出的光路上设置光阑,利用同步切换的光阑和滤色片使一次扫描过程只允许特定波长的一束激发光通过,以分时复用方式实现了对生物芯片的双波长荧光扫描检测。本发明克服了全机械扫描惯性大、往复行程长、震动大、扫描频率低等缺点;可有效抑制双波长同时扫描中的串扰。

Figure 02112040

The present invention adopts the light emitted by two light sources with different wavelengths to be respectively incident on the vibrating mirror which swings back and forth around the axis through the reflecting mirror, and the angle-changing light reflected by the vibrating mirror is converted into linear displacement light by the scanning objective lens, and is diverted to the living organism through the prism. The chip realizes the one-dimensional scanning of the biological chip, and the other one-dimensional scanning is a mechanical scanning driven by a motor. The fluorescence emitted by the biochip is diverted to the scanning objective through the prism, then through the vibrating mirror, reflector, and condenser, and then through the aperture of the confocal diaphragm to reach the optical filter. After filtering out the stray light, it is converted into an electrical signal by the photodetector. In the present invention, an aperture is set on the optical path emitted by the light source, and a synchronously switched aperture and a color filter are used to allow only one beam of excitation light with a specific wavelength to pass through in one scanning process, thereby realizing the dual detection of the biological chip in a time-division multiplexing manner. Wavelength fluorescence scanning detection. The invention overcomes the disadvantages of large mechanical scanning inertia, long reciprocating stroke, large vibration, low scanning frequency, etc., and can effectively suppress crosstalk in dual-wavelength simultaneous scanning.

Figure 02112040

Description

生物芯片分析仪Biochip Analyzer

                          技术领域Technical field

本发明涉及生物芯片分析仪。The invention relates to a biochip analyzer.

                          背景技术 Background technique

生物芯片广泛用于基因研究、药物研究、疾病诊断等领域,它采用分子杂交原理将要检测的样品加以荧光分子标记,然后与已知结构的生物芯片进行杂交反应,用生物芯片分析仪检测发生杂交反应位置处的荧光信号,并以图像形式显示出来。Biochips are widely used in gene research, drug research, disease diagnosis and other fields. It uses the principle of molecular hybridization to label the samples to be detected with fluorescent molecules, and then performs hybridization reactions with biochips of known structures, and uses biochip analyzers to detect the occurrence of hybridization. The fluorescent signal at the reaction site is displayed graphically.

目前在用的激光共聚焦式生物芯片分析仪是采用全机械二维扫描和双光源、双光电探测器实现双波长的荧光检测的。它包括按一定角度错开的双光源、双光电探测器,光源发射的激光光束通过透镜、分光镜和棱镜到达生物芯片上的某点,激发该点位置上的荧光染色分子发射荧光,荧光通过棱镜,由分光镜反射至反射镜,再经过聚光镜会聚,到达光电探测器。对芯片的二维扫描是利用直线驱动器驱动棱镜作X方向移动,步进电机驱动生物芯片作Y方向移动。这种生物芯片分析仪存在以下不足:1)它的扫描速度受直线驱动器的运行频率(最高为20Hz左右)限制,生物芯片的分析时间长,而且直线驱动器的震动大,扫描惯性大,往复的行程长,导致相应棱镜的行程也长,使得激光光束的聚焦光斑变化大,影响了仪器的分辨率;2)聚光镜的数值孔径NA受到机械结构的限制,数值不是很大,影响了仪器的分析灵敏度;3)它采用双光源、双探测器实现对双波长荧光的同时扫描成像,使得整个仪器的结构复杂,并且扫描图像中存在串扰,影响了仪器的性能。The laser confocal biochip analyzer currently in use uses fully mechanical two-dimensional scanning, dual light sources, and dual photodetectors to achieve dual-wavelength fluorescence detection. It includes dual light sources and dual photodetectors that are staggered at a certain angle. The laser beam emitted by the light source reaches a certain point on the biochip through lenses, beam splitters and prisms, and excites the fluorescent dye molecules at the point to emit fluorescence, and the fluorescence passes through the prism. , reflected by the beam splitter to the reflector, and then converged by the condenser to reach the photodetector. The two-dimensional scanning of the chip is to use the linear driver to drive the prism to move in the X direction, and the stepper motor to drive the biochip to move in the Y direction. This biochip analyzer has the following disadvantages: 1) its scanning speed is limited by the operating frequency (up to about 20 Hz) of the linear drive, the analysis time of the biochip is long, and the vibration of the linear drive is large, the scanning inertia is large, and the reciprocating The stroke is long, resulting in a long stroke of the corresponding prism, which makes the focus spot of the laser beam change greatly, which affects the resolution of the instrument; 2) The numerical aperture NA of the condenser is limited by the mechanical structure, and the value is not very large, which affects the analysis of the instrument Sensitivity; 3) It uses dual light sources and dual detectors to realize simultaneous scanning and imaging of dual-wavelength fluorescence, which makes the structure of the entire instrument complex, and there is crosstalk in the scanning image, which affects the performance of the instrument.

                          发明内容Contents of Invention

本发明的目的是提供一种结构简单,降低成本,性能好的生物芯片分析仪。The object of the present invention is to provide a biochip analyzer with simple structure, low cost and good performance.

本发明的生物芯片分析仪,包括第一、第二两个不同波长的光源,平行装置的反射镜和全反射镜,第二光源发射的光由反射镜反射,穿越带孔反射镜的孔入射到振镜,第一光源发射的光由全反射镜反射,透过反射镜后穿越带孔反射镜的孔入射到振镜,振镜装置在转轴上,绕轴往返摆动,在振镜至生物芯片的光路上,装置有将来自振镜的角度变化的反射光转变成线性位移光的扫描物镜和将扫描物镜出射的光转向到生物芯片上的棱镜,形成光在生物芯片X方向扫描,生物芯片安装在直线导轨上,由步进电机驱动沿着X、Y构成的二维平面的Y方向移动,生物芯片发射的荧光,入射到棱镜,经棱镜转向和扫描物镜转变成平行光束入射到振镜,由振镜反射到带孔反射镜,在带孔反射镜反射的光路上,沿反射光依次装置聚光镜,共焦光阑、垂直于光路并处于同一平面,在光路上互相切换的两块滤色片和光电探测器,在第一光源和全反射镜之间设有与第一滤色片对应同步切换的第一光阑,在第二光源和反射镜之间设有与第二滤色片对应同步切换的光阑,当第一光阑打开时,第二光阑关闭,第一滤色片在光路上,当第一光阑关闭时,第二光阑打开,第二滤色片在光路上。The biochip analyzer of the present invention comprises first and second light sources of different wavelengths, a reflector and a total reflection mirror of parallel devices, the light emitted by the second light source is reflected by the reflector, and passes through the holes of the perforated reflector to be incident to the vibrating mirror, the light emitted by the first light source is reflected by the total reflection mirror, passes through the reflector and then enters the vibrating mirror through the hole of the perforated mirror. The vibrating mirror is installed on the rotating shaft and swings back and forth around the axis. On the optical path of the chip, the device has a scanning objective lens that converts the reflected light from the vibrating mirror into linear displacement light and a prism that turns the light emitted by the scanning objective lens onto the biochip, forming light scanning in the X direction of the biochip, and biological The chip is installed on a linear guide rail, driven by a stepping motor to move along the Y direction of the two-dimensional plane formed by X and Y. The fluorescence emitted by the biochip is incident on the prism, and then transformed into a parallel beam incident on the vibrator by the prism steering and scanning objective lens. The mirror is reflected from the oscillating mirror to the perforated mirror. On the optical path reflected by the perforated mirror, the condenser lens is sequentially installed along the reflected light, and the confocal diaphragm is perpendicular to the optical path and in the same plane. Two pieces are switched on the optical path. The color filter and the photodetector are provided with a first diaphragm corresponding to the first color filter and switched synchronously between the first light source and the total reflection mirror, and a second diaphragm with the second filter is provided between the second light source and the reflection mirror. The color film corresponds to the diaphragm that is switched synchronously. When the first diaphragm is opened, the second diaphragm is closed, and the first color filter is on the optical path. When the first diaphragm is closed, the second diaphragm is opened, and the second filter is on the optical path. film on the light path.

工作时,光源发射出来的激发光由反射镜反射到振镜,再通过扫描物镜将入射的角度变化的激发光束转变成某一方向上的线性位移,由棱镜改变方向,到达生物芯片上的某点。标记有荧光染料的靶分子在激发光的激发下产生荧光,荧光经棱镜转向到扫描物镜,由扫描物镜收集后变换成平行光,再经振镜,带孔反射镜到达聚光镜,聚焦于共焦光阑,通过共焦光阑小孔的荧光经过滤光片,滤除掉其他波长的杂散光后,由光电探测器转换成电信号,供后续处理和成像分析。该生物芯片分析仪一维方向的扫描采用由振镜和扫描物镜相结合的光学扫描,另一维方向的扫描是由步进电机驱动的机械扫描。同时利用同步切换的光阑和滤色片使一次扫描过程只允许特定波长的一束激发光通过,以分时复用方式,只用一个光电探测器即实现了对生物芯片的双波长荧光扫描检测。When working, the excitation light emitted by the light source is reflected by the mirror to the vibrating mirror, and then the incident angle-changing excitation beam is converted into a linear displacement in a certain direction through the scanning objective lens, and the direction is changed by the prism to reach a certain point on the biochip . The target molecules marked with fluorescent dyes generate fluorescence under the excitation of excitation light, and the fluorescence is diverted to the scanning objective lens through the prism, collected by the scanning objective lens and transformed into parallel light. Aperture: Fluorescence passing through the aperture of the confocal aperture passes through a filter to filter out stray light of other wavelengths, and then is converted into an electrical signal by a photodetector for subsequent processing and imaging analysis. The scanning in one dimension of the biochip analyzer adopts optical scanning combined with a vibrating mirror and a scanning objective lens, and scanning in another dimension is mechanical scanning driven by a stepping motor. At the same time, the aperture and color filter that are switched synchronously allow only one beam of excitation light with a specific wavelength to pass through in one scanning process. In a time-division multiplexing manner, only one photodetector is used to realize the dual-wavelength fluorescence scanning of the biochip. detection.

通常,扫描物镜采用远心f-θ扫描物镜。以便在光学扫描过程中,保持荧光探测的均匀性,使通过扫描物镜入射到生物芯片上的激发光束的主光线始终垂直于生物芯片。Typically, the scanning objective adopts a telecentric f-theta scanning objective. In order to maintain the uniformity of fluorescence detection during the optical scanning process, the chief ray of the excitation beam incident on the biochip through the scanning objective lens is always perpendicular to the biochip.

本发明采用光学扫描与机械扫描相结合的二维扫描,因此克服了全机械扫描中直线驱动器的扫描惯性大、往复行程长、震动大、扫描频率低等缺点;The present invention adopts two-dimensional scanning combining optical scanning and mechanical scanning, so it overcomes the shortcomings of the linear drive in full mechanical scanning, such as large scanning inertia, long reciprocating stroke, large vibration, and low scanning frequency;

本发明以分时复用的方式实现生物芯片的双波长荧光扫描,可有效抑制双波长同时扫描中的串扰,同时使整个仪器的结构简单,成本降低;The invention realizes the dual-wavelength fluorescence scanning of the biological chip in a time-division multiplexing manner, which can effectively suppress the crosstalk in the dual-wavelength simultaneous scanning, and at the same time make the structure of the whole instrument simple and reduce the cost;

由于振镜的转角精度和重复精度都很高,而且转角步长很小,因此,可以获得高分辨率的生物芯片扫描图像。而且振镜的扫描频率比直线驱动器的扫描频率高很多,使得生物芯片的扫描效率也有较大的提高;Because the galvanometer has high rotation angle accuracy and repeatability, and the rotation angle step size is very small, high-resolution biochip scanning images can be obtained. Moreover, the scanning frequency of the vibrating mirror is much higher than that of the linear drive, which greatly improves the scanning efficiency of the biochip;

此外,采用f-θ扫描物镜能使生物芯片上每一点出射的荧光主光线方向均为生物芯片的法线方向,可保证每个被测点荧光辐射角的一致性。In addition, the f-theta scanning objective lens can make the direction of the main fluorescence light emitted from each point on the biochip be the normal direction of the biochip, which can ensure the consistency of the fluorescence radiation angle of each measured point.

                          附图说明Description of drawings

附图是本发明构成示意图。Accompanying drawing is a schematic diagram of the present invention.

                          具体实施方式 Detailed ways

参照附图,发明的生物芯片分析仪,包括第一、第二两个不同波长的光源1、2,平行装置的反射镜6和全反射镜5,二个光源是波长不同的激光源,波长范围在400nm~650nm。如第一光源1采用635nm的红激光,第二光源2采用532nm的绿激光。第二光源2发射的光由反射镜6反射,穿越带孔反射镜7的孔入射到振镜8,第一光源1发射的光由全反射镜5反射,透过反射镜6后穿越带孔反射镜7的孔入射到振镜8,振镜8装置在转轴8’上,绕轴往返摆动(如图中虚线所示),在振镜8至生物芯片12的光路上,装置有扫描物镜9和棱镜10,振镜8绕轴摆动,使得激发光束相对于振镜的入射角不断变化,因此,振镜将激发光束以不同的角度反射至扫描物镜9,扫描物镜9将激发光束角度的变化转换为沿某一方向的位移变化,并由棱镜10改变方向入射到生物芯片12上,实现生物芯片12在一维方向(如X方向)上的光学扫描。生物芯片安装在直线导轨11上,由步进电机驱动沿着X、Y构成的二维平面的Y方向移动,实现生物芯片在另一维方向的扫描。激发光束激发生物芯片上相应位置处的荧光染色分子发射荧光,发射的荧光被棱镜10改变传播方向到达扫描物镜9,通过扫描物镜9后变成平行光束到达振镜8,此平行光束的尺寸比激发光束的尺寸大得多,因此,荧光到达带孔反射镜7后绝大部分能量被反射,只有很少一部分荧光通过带孔反射镜7的小孔而损失。在带孔反射镜7反射的光路上,沿反射光依次装置聚光镜13,共焦光阑14、垂直于光路并处于同一平面,在光路上互相切换的两块滤色片15、16和光电探测器17,光电探测器17可以是光电倍增管或雪崩二极管或PIN光电二极管。第一滤色片15与设在第一光源1和全反射镜5之间的第一光阑3对应同步切换,第二滤色片16与设在第二光源2和反射镜6之间的第二光阑4对应同步切换。带孔反射镜7反射的荧光由聚光镜13会聚,通过共焦光阑14的小孔,到达与激发光束波长相对应的滤色片,当第一光阑3打开时,第二光阑4关闭,第一滤色片15在光路上,这时第一光源1对生物芯片实现某一波长的单波长扫描,当第一光阑3关闭时,第二光阑4打开,第二滤色片16在光路上,这时第二光源2对生物芯片实现另一波长的单波长扫描,经滤色片滤除杂散光后的光束由光电探测器17转换为电信号,供后续处理和成像分析。With reference to accompanying drawing, the biochip analyzer of invention comprises the light source 1,2 of the first and second two different wavelengths, the reflection mirror 6 and total reflection mirror 5 of parallel device, two light sources are different laser sources of wavelength, wavelength The range is from 400nm to 650nm. For example, the first light source 1 uses a 635nm red laser, and the second light source 2 uses a 532nm green laser. The light emitted by the second light source 2 is reflected by the reflector 6, passes through the hole of the perforated reflector 7, and enters the vibrating mirror 8, and the light emitted by the first light source 1 is reflected by the total reflection mirror 5, passes through the reflector 6 and passes through the hole The hole of the reflector 7 is incident on the oscillating mirror 8, and the oscillating mirror 8 is installed on the rotating shaft 8' and swings back and forth around the axis (as shown by the dotted line in the figure). On the optical path from the oscillating mirror 8 to the biochip 12, a scanning objective lens 9 and prism 10, the vibrating mirror 8 swings around the axis, so that the incident angle of the excitation beam relative to the vibrating mirror is constantly changing, therefore, the vibrating mirror reflects the exciting beam to the scanning objective lens 9 at different angles, and the scanning objective lens 9 changes the angle of the exciting beam The change is converted into a displacement change along a certain direction, and the direction is changed by the prism 10 to be incident on the biochip 12 to realize the optical scanning of the biochip 12 in a one-dimensional direction (such as the X direction). The biochip is installed on the linear guide rail 11, and is driven by a stepping motor to move along the Y direction of the two-dimensional plane formed by X and Y, so as to realize the scanning of the biochip in another dimension. The excitation beam excites the fluorescent dye molecules at the corresponding positions on the biochip to emit fluorescence, and the emitted fluorescence is changed by the prism 10 to reach the scanning objective lens 9, and after passing through the scanning objective lens 9, it becomes a parallel beam and reaches the vibrating mirror 8. The size ratio of the parallel beam is The size of the excitation beam is much larger, therefore, most of the energy of the fluorescent light is reflected after reaching the perforated mirror 7, and only a small part of the fluorescent light is lost through the small hole of the perforated mirror 7. On the optical path reflected by the perforated reflector 7, the condenser lens 13 is installed sequentially along the reflected light, the confocal diaphragm 14 is perpendicular to the optical path and is on the same plane, and two color filters 15, 16 and photodetectors are switched on the optical path. 17, the photodetector 17 can be a photomultiplier tube or an avalanche diode or a PIN photodiode. The first color filter 15 and the corresponding synchronous switching of the first diaphragm 3 arranged between the first light source 1 and the total reflection mirror 5, the second color filter 16 and the first diaphragm 3 arranged between the second light source 2 and the reflector 6 The second aperture 4 corresponds to synchronous switching. The fluorescent light reflected by the hole mirror 7 is converged by the condenser lens 13, passes through the small hole of the confocal diaphragm 14, and reaches the color filter corresponding to the wavelength of the excitation beam. When the first diaphragm 3 is opened, the second diaphragm 4 is closed , the first color filter 15 is on the optical path. At this time, the first light source 1 realizes single-wavelength scanning of a certain wavelength on the biochip. When the first aperture 3 is closed, the second aperture 4 is opened, and the second color filter 16 is on the optical path, at this time, the second light source 2 scans the biochip with a single wavelength of another wavelength, and the light beam after the stray light is filtered by the color filter is converted into an electrical signal by the photodetector 17 for subsequent processing and imaging analysis .

Claims (4)

1. biochip analysis instrument, comprise first, the light source (1) of the second two different wave lengths, (2), catoptron of parallel device (6) and completely reflecting mirror (5), the light of secondary light source (2) emission is reflected by catoptron (6), galvanometer (8) is incided in the hole of passing through catoptron with holes (7), the light of first light source (1) emission is reflected by completely reflecting mirror (5), galvanometer (8) is incided in the hole of passing through catoptron with holes (7) behind the penetration mirror (6), galvanometer (8) device is in rotating shaft 8 ', around the axle reciprocating swing, at galvanometer (8) to the light path of biochip (12), device has the reflected light that will change from the angle of galvanometer (8) to be transformed into the scanning objective (9) of linear displacement light and the light of scanning objective outgoing is redirect to prism (10) on the biochip (12), forming light scans at the biochip directions X, biochip is installed on the line slideway (11), by step motor drive along X, the Y direction of the two dimensional surface that Y constitutes moves, the biochip emitted fluorescence, incide prism (10), turn to and scanning objective (9) is transformed into parallel beam and incides galvanometer (8) through prism (10), reflex to catoptron with holes (7) by galvanometer (8), on the light path of catoptron with holes (7) reflection, install condenser (13) successively along reflected light, confocal diaphragm (14), perpendicular to light path and be in same plane, two color filters (15) that on light path, switch mutually, (16) and photodetector (17), between first light source (1) and completely reflecting mirror (5), be provided with corresponding first diaphragm (3) that switches synchronously with first color filter (15), between secondary light source (2) and catoptron (6), be provided with the corresponding diaphragm (4) that switches synchronously with second color filter (16), when first diaphragm (3) when opening, second diaphragm (4) is closed, first color filter (1 5) is on light path, when first diaphragm (3) when closing, second diaphragm (4) is opened, and second color filter (16) is on light path.
2. by the described biochip analysis instrument of claim 1, it is characterized in that said scanning objective (9) is a heart f-θ scanning objective far away.
3. by the described biochip analysis instrument of claim 1, it is characterized in that two light sources (1) and (2) are the different lasing light emitters of wavelength, wavelength coverage is at 400nm~650nm.
4. by the described biochip analysis instrument of claim 1, it is characterized in that photodetector (17) is photomultiplier or avalanche diode or PIN photodiode.
CNB021120404A 2002-06-09 2002-06-09 Biochip Analyzer Expired - Fee Related CN1164925C (en)

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