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CN111458835A - A kind of microscope multi-view autofocus system and using method thereof - Google Patents

A kind of microscope multi-view autofocus system and using method thereof Download PDF

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CN111458835A
CN111458835A CN202010300325.7A CN202010300325A CN111458835A CN 111458835 A CN111458835 A CN 111458835A CN 202010300325 A CN202010300325 A CN 202010300325A CN 111458835 A CN111458835 A CN 111458835A
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王建立
陈璐
张怡
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Southeast University
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    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B7/00Mountings, adjusting means, or light-tight connections, for optical elements
    • G02B7/28Systems for automatic generation of focusing signals
    • G02B7/36Systems for automatic generation of focusing signals using image sharpness techniques, e.g. image processing techniques for generating autofocus signals
    • G02B7/38Systems for automatic generation of focusing signals using image sharpness techniques, e.g. image processing techniques for generating autofocus signals measured at different points on the optical axis, e.g. focussing on two or more planes and comparing image data
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B21/00Microscopes
    • G02B21/36Microscopes arranged for photographic purposes or projection purposes or digital imaging or video purposes including associated control and data processing arrangements
    • G02B21/362Mechanical details, e.g. mountings for the camera or image sensor, housings
    • GPHYSICS
    • G02OPTICS
    • G02BOPTICAL ELEMENTS, SYSTEMS OR APPARATUS
    • G02B21/00Microscopes
    • G02B21/36Microscopes arranged for photographic purposes or projection purposes or digital imaging or video purposes including associated control and data processing arrangements
    • G02B21/365Control or image processing arrangements for digital or video microscopes

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Abstract

本发明提供了一种显微镜多视野自动对焦系统,包括显微镜主体、步进电机控制系统、拍摄单元、移动载物平台;使用方法包括手动将显微镜物镜调至相对聚焦区间,在该区间内通过步进电机改变载物台z轴坐标并获取视频图像,计算并比较移动区间端点目标物体图像灰度值方差的平均值,根据黄金分割法进行优化迭代得到最值,实现z轴方向的自动对焦;步进电机控制载物台在xy轴平面按s形前进方向进行改变,实现平面上连续位置的扫描,最后将扫描图像进行拼接。本发明提供的自动对焦系统方法具有计算复杂度低等优点,可拍摄高分辨率和大视野医学图像。

Figure 202010300325

The invention provides a microscope multi-view automatic focusing system, which includes a microscope main body, a stepping motor control system, a shooting unit, and a moving object platform; the use method includes manually adjusting the microscope objective lens to a relative focusing range, and passing the step in the range. The motor changes the z-axis coordinate of the stage and acquires the video image, calculates and compares the average value of the variance of the gray value of the target object image at the end point of the moving interval, and optimizes and iterates according to the golden section method to obtain the maximum value, and realizes the automatic focusing in the z-axis direction; The stepper motor controls the stage to change according to the s-shaped advancing direction in the xy-axis plane, so as to realize the scanning of continuous positions on the plane, and finally stitch the scanned images. The automatic focusing system method provided by the invention has the advantages of low computational complexity and the like, and can capture high-resolution and large-field medical images.

Figure 202010300325

Description

一种显微镜多视野自动对焦系统及其使用方法A kind of microscope multi-view autofocus system and using method thereof

技术领域:Technical field:

本发明涉及数字图像技术领域,尤其涉及一种显微镜多视野自动对焦系统及其使用方法。The invention relates to the technical field of digital images, in particular to a microscope multi-view automatic focusing system and a method for using the same.

背景技术:Background technique:

显微镜自1590年由荷兰的詹森父子发明以来,能够帮助研究员观察肉眼不可见的微小物体,打开了微观世界的大门,在生物学界乃至整个科学界一直享有举足轻重的作用。Since the invention of the microscope by Jansen and his son in the Netherlands in 1590, the microscope can help researchers observe tiny objects invisible to the naked eye and open the door to the microscopic world.

物镜对焦是显微镜观测流程中重要一环,然而随着科技的迅猛发展,传统的手动调焦方式难以适应现代科学的要求。研究员通过肉眼观测以及作业疲劳易使测量的最终结果产生偏差,手动对焦也存在着效率低等缺陷。利用显微镜自动对焦的技术能够很好的解决上述问题,将研究员从枯燥的重复劳动中解放,着手于更加具有创造力的工作。Objective lens focusing is an important part of the microscope observation process. However, with the rapid development of science and technology, the traditional manual focusing method is difficult to meet the requirements of modern science. The final result of the measurement is easily deviated by the researchers through visual observation and work fatigue, and manual focusing also has defects such as low efficiency. The use of microscope autofocus technology can solve the above problems very well, freeing researchers from boring repetitive work and starting more creative work.

目前国内外对于显微镜自动对焦技术的探索还处于起步阶段,主要的研究与应用集中在医学领域。自动对焦系统研究也以静态单图为主,缺少样本连续位置的动态对焦,影响所获样本的完整性。At present, the exploration of microscope autofocus technology at home and abroad is still in its infancy, and the main research and application are concentrated in the medical field. The research of autofocus system is also mainly based on static single image, lack of dynamic focus of continuous position of the sample, which affects the integrity of the obtained sample.

因此,本发明提出一种基于灰度值方差值的显微镜多视野多图像自动对焦系统,旨在实现快速、精准的显微镜连续自动对焦。Therefore, the present invention proposes a multi-view multi-image auto-focusing system for microscopes based on the variance value of gray values, aiming at realizing fast and accurate continuous auto-focusing of microscopes.

发明内容:Invention content:

本发明的目的在于针对上述存在的问题,提供了一种显微镜多视野自动对焦系统及其使用方法,实现了对不同视野样本的快速对焦。The purpose of the present invention is to solve the above-mentioned problems, and provide a microscope multi-view auto-focusing system and a method for using the same, which realizes the rapid focusing of samples with different fields of view.

一种显微镜多视野自动对焦系统至少包括显微镜主体、步进电机控制系统、拍摄单元、移动载物平台,其使用方法包括以下步骤:A microscope multi-view automatic focusing system at least includes a microscope main body, a stepping motor control system, a shooting unit, and a moving object platform, and the using method includes the following steps:

步骤1:将所述显微镜物镜手动大致调焦,使某一位置观测到的图像相对清晰;Step 1: roughly manually adjust the focus of the microscope objective, so that the image observed at a certain position is relatively clear;

步骤2:通过所述步进电机控制所述移动载物平台,改变所述移动载物平台z轴坐标,利用所述拍摄单元采集样本视频图像;Step 2: control the moving object platform by the stepper motor, change the z-axis coordinate of the moving object platform, and use the shooting unit to collect sample video images;

步骤3:对所述样本每一帧的视频图像进行清晰度评价计算,在所述载物平台z轴移动范围内通过一维线性优化法寻找清晰度评价函数极大值,记录为焦点近似点;Step 3: carry out sharpness evaluation calculation to the video image of each frame of the sample, find the maximum value of sharpness evaluation function by one-dimensional linear optimization method in the moving range of the z-axis of the loading platform, and record it as a focus approximate point ;

步骤4:将所述对焦图像及对应坐标上传至所述软件可视化窗口中,等待后续图像拼接;Step 4: upload the focus image and corresponding coordinates to the software visualization window, wait for subsequent image splicing;

步骤5:通过所述步进电机控制所述载物平台按固定步长沿xy轴平面按s形前进方向,每一个测量点处重复所述步骤2、步骤3、步骤4,直至所述软件界面端呈现完整的所述样本对焦拼接图像。Step 5: Control the loading platform by the stepper motor in the s-shaped advancing direction along the xy-axis plane at a fixed step length, repeat the step 2, step 3, step 4 at each measurement point, until the software The interface end presents the complete focus mosaic image of the sample.

作为本发明的进一步改进,所述视频图像清晰度采用灰度值方差平均值作为评估函数进行测量,在所述处理器中计算得到该图像对比度值。所述载物平台在预先给定的z轴方向区间内先沿正方向移动,判断该距离内所拍图像清晰度评价函数的大小趋势,如果是递增的,则继续沿该方向移动并找出集合中最清晰的图像;如果是递减的,则向相反方向移动载物平台并对拍摄图像的清晰度进行计算,找出最清晰的图像。As a further improvement of the present invention, the video image sharpness is measured by using the average value of gray value variance as an evaluation function, and the image contrast value is calculated in the processor. The loading platform first moves in the positive direction within the predetermined z-axis direction interval, and judges the size trend of the image sharpness evaluation function in the distance. If it is increasing, continue to move in this direction and find out. The sharpest image in the collection; if it is decreasing, move the stage in the opposite direction and calculate the sharpness of the captured image to find the sharpest image.

作为本发明的进一步改进,所述图像清晰度评估函数一维线性优化采用黄金分割法寻找该函数的极大值,比较所述载物平台z轴方向移动区间端点两位置的灰度值方差的平均值,并进行优化迭代,直至移动区间小于给定阈值,停止迭代,得到焦点的近似解,实现z方向上的自动对焦,并将对焦图像与对应三轴坐标进行保存。As a further improvement of the present invention, the one-dimensional linear optimization of the image sharpness evaluation function adopts the golden section method to find the maximum value of the function, and compares the gray value variance of the two positions of the end points of the moving interval in the z-axis direction of the stage. The average value of , and optimization iteration is performed until the moving interval is less than the given threshold, then the iteration is stopped, the approximate solution of the focus is obtained, the automatic focus in the z direction is realized, and the focused image and the corresponding three-axis coordinates are saved.

作为本发明的进一步改进,所述步进电机控制所述移动载物平台沿xy轴平面移动时,若在x轴方向给定一个位移偏量,则y轴方向坐标保持不变。若在y轴方向给定一个位移偏量,则x轴方向坐标保持不变。根据上述移动规则进行直线s形前进,实现平面上连续位置的扫描。As a further improvement of the present invention, when the stepper motor controls the moving object platform to move along the xy-axis plane, if a displacement offset is given in the x-axis direction, the y-axis direction coordinate remains unchanged. If a displacement offset is given in the y-axis direction, the x-axis direction coordinates remain unchanged. According to the above-mentioned moving rules, the linear s-shaped advance is carried out to realize the scanning of continuous positions on the plane.

有益效果:Beneficial effects:

本发明通过采集及计算图像灰度值方差的平均值,利用黄金分割一维线性优化法迭代以实现显微镜镜头的自动对焦,获取对焦图片。与现有技术相比,该自动对焦方法计算量小,精度高,大大节省人力与物力资源,提高了对焦效率。The invention collects and calculates the average value of the variance of the gray value of the image, and uses the golden section one-dimensional linear optimization method to iterate to realize the automatic focusing of the microscope lens and obtain the focused picture. Compared with the prior art, the automatic focusing method has small calculation amount and high precision, greatly saves manpower and material resources, and improves focusing efficiency.

本发明打破了传统静态单图片对焦的局限,利用步进电机控制载物平台按固定步长沿xy轴平面按s形方向前进,实现了多视野的动态对焦。通过软件自动拼接对焦图像集,可以获得清晰完整的被测物图像,提升了系统的测量完整性,特别是当测量物表面凹凸不平时,具有很大的优势。The invention breaks the limitation of the traditional static single-picture focusing, and uses the stepping motor to control the object platform to advance in the s-shaped direction along the xy-axis plane with a fixed step length, thereby realizing the dynamic focusing of multiple fields of view. Through the automatic stitching of the focused image set by the software, a clear and complete image of the measured object can be obtained, which improves the measurement integrity of the system, especially when the surface of the measured object is uneven, which has great advantages.

附图说明:Description of drawings:

图1为本发明的显微镜自动对焦控制平台系统示意图;1 is a schematic diagram of a microscope autofocus control platform system of the present invention;

图2为本发明的显微镜自动对焦及拼接流程图;Fig. 2 is the microscope autofocusing and splicing flow chart of the present invention;

图3为本发明的对焦拼接扫描过程图;Fig. 3 is the focus splicing scanning process diagram of the present invention;

图4为本发明基于Labview开发环境搭建的系统扫描界面软件图。FIG. 4 is a software diagram of a system scanning interface constructed based on the Labview development environment of the present invention.

附图标记列表:List of reference numbers:

1-摄像头,2-物镜,3-三坐标台,4-电机控制器,5-多功能采集卡。1-Camera, 2-Objective lens, 3-Three-coordinate stage, 4-Motor controller, 5-Multifunctional capture card.

具体实施方式:Detailed ways:

下面结合附图和具体实施例对本发明作进一步的详细说明。The present invention will be further described in detail below with reference to the accompanying drawings and specific embodiments.

实施例Example

搭建整个显微镜多视野多图像对焦系统平台,包括所述控制系统、所述视频图像采集系统与所述数据处理系统的搭建。其整体系统示意图如图1所示,载物台位置由xyz三坐标移动台3自动调整,多功能采集卡5根据摄像头1采集得到的图像,采用灰度判断函数评价并输出脉冲序列给电机控制器4,用以控制三坐标台3上的异步电机。将被测样本安放在移动载物平台上,系统参数调试完毕后,准备进行测试。Build the entire microscope multi-view multi-image focusing system platform, including the control system, the video image acquisition system and the data processing system. The overall system schematic diagram is shown in Figure 1. The position of the stage is automatically adjusted by the xyz three-coordinate mobile platform 3, and the multi-function acquisition card 5 uses the gray-scale judgment function to evaluate and output the pulse sequence to the motor control according to the image collected by the camera 1. The device 4 is used to control the asynchronous motor on the three-coordinate table 3. Place the sample to be tested on the mobile carrier platform, and prepare for testing after the system parameters are debugged.

将所述显微镜物镜手动大致粗调焦,使某一位置观测到的图像相对清晰,打开所述视频图像采集系统,开启系统自动进行细调焦。The objective lens of the microscope is roughly manually adjusted to make the image observed at a certain position relatively clear, the video image acquisition system is turned on, and the system is turned on to automatically perform fine focusing.

通过所述步进电机控制所述移动载物平台,10000脉冲对应1mm改变所述移动载物平台的z轴坐标。利用所述拍摄单元采集样本视频图像,传送到数据处理器中进行分析。注意在整个测试过程中保证所述显微镜物镜的位置固定不变。The moving object platform is controlled by the stepper motor, and 10000 pulses correspond to 1mm to change the z-axis coordinate of the moving object platform. The sample video images are collected by the shooting unit and sent to the data processor for analysis. Take care to keep the position of the microscope objective fixed throughout the test.

采集的真彩图片集先由系统进行灰度处理,对焦的图像轮廓清楚、细节丰富、对比度高,可采用灰度值方差平均值作为图像清晰度评估函数。如图2所示,在所述系统中预先设定好扫描视野的大小,当所述载物平台移动到初始位置后,沿设定的z轴方向区间进行正方向移动,计算清晰度评价数值并判断该移动方向上所拍图像清晰度评价函数的大小趋势,如果是递增的,则继续沿该方向进行移动并计算拍摄图像的清晰度;如果是递减的,则向相反方向移动所述载物平台。The collected true-color image sets are first processed by the system in grayscale, and the focused images have clear outlines, rich details and high contrast. As shown in Figure 2, the size of the scanning field of view is pre-set in the system. After the loading platform moves to the initial position, it moves in the positive direction along the set z-axis direction interval to calculate the sharpness evaluation value. And judge the size trend of the image sharpness evaluation function in the moving direction. If it is increasing, continue to move along this direction and calculate the sharpness of the captured image; if it is decreasing, move the image in the opposite direction. material platform.

灰度评价函数具有单峰性特征,可采用一维线性优化法寻找清晰度评价函数的极大值。本发明采用黄金分割法进行迭代,计算量小效率高,可实现显微镜自动对焦系统的高效性。当z轴移动区间足够小时,停止迭代,得到焦点的近似解。系统记录此时所拍图像的坐标即为第一个对焦图像点的坐标,同时该图像作为第一帧对焦图像进行保存,呈现在所述终端软件系统窗口中。The grayscale evaluation function has the characteristic of unimodality, and the one-dimensional linear optimization method can be used to find the maximum value of the sharpness evaluation function. The invention adopts the golden section method to iterate, the calculation amount is small and the efficiency is high, and the high efficiency of the automatic focusing system of the microscope can be realized. When the z-axis movement interval is small enough, the iteration is stopped and an approximate solution of the focus is obtained. The coordinates of the image captured by the system at this time are the coordinates of the first focused image point, and at the same time, the image is saved as the first frame of focused image and presented in the terminal software system window.

得到当前对焦图像后,所述步进电机控制所述载物平台沿xy轴平面进行移动,并保持z轴方向不发生改变。在移动过程中,若所述载物平台在x轴方向有一个移动位移偏量,则y轴方向坐标保持不变。若所述载物平台在y轴方向有一个移动位移偏量,则x轴方向坐标保持不变。根据此移动规则进行直线s形前进,实现平面上连续位置的扫描。将扫描图像依次进行图像清晰度评估,黄金分割线性优化寻找极大值。After obtaining the current focused image, the stepper motor controls the stage to move along the xy-axis plane, and keeps the z-axis direction unchanged. During the moving process, if the object platform has a movement displacement offset in the x-axis direction, the y-axis direction coordinate remains unchanged. If the stage has a displacement offset in the y-axis direction, the x-axis direction coordinates remain unchanged. According to this moving rule, a straight s-shaped advance is performed to realize the scanning of continuous positions on the plane. The scanned images are sequentially evaluated for image sharpness, and the golden section is linearly optimized to find the maximum value.

所获一系列对焦图像在所述处理器终端以对应的三维坐标名进行保存,实验人员可在终端软件系统窗口中观察到完整的样本对焦图像集,实现了显微镜多视野多图像的快速自动对焦。图3、图4分别为具体的对焦拼接扫描过程图及基于Labview软件搭建的系统扫描界面软件图。The acquired series of in-focus images are saved in the processor terminal with the corresponding three-dimensional coordinate names, and the experimenter can observe the complete sample in-focus image set in the terminal software system window, realizing the rapid auto-focusing of the microscope with multiple fields of view and multiple images. . Figure 3 and Figure 4 are the specific focus splicing scanning process diagram and the system scanning interface software diagram based on Labview software, respectively.

以上所述之实例,只是本发明的较佳例,并非限制本发明的实施范围。在不背离本发明精神及其实质的情况下,技术人员可根据本发明做出各种相应的改变和变形,但这些相应的改变和变形都应属于本发明所附的权利要求的保护范围。The above-mentioned examples are only preferred examples of the present invention, and do not limit the scope of implementation of the present invention. Without departing from the spirit and essence of the present invention, the skilled person can make various corresponding changes and deformations according to the present invention, but these corresponding changes and deformations should all belong to the protection scope of the appended claims of the present invention.

Claims (5)

1.一种显微镜多视野自动对焦系统,其特征在于,包括显微镜主体、步进电机控制系统、拍摄单元和移动载物平台。1. A microscope multi-field autofocus system, characterized in that, comprising a microscope main body, a stepping motor control system, a photographing unit and a moving object-carrying platform. 2.根据权利要求1所述的一种显微镜多视野自动对焦系统的使用方法,其特征在于,包括以下步骤:2. the using method of a kind of microscope multi-field autofocus system according to claim 1, is characterized in that, comprises the following steps: 步骤1:将显微镜主体的物镜手动调焦,使观测到的图像清晰;Step 1: Manually focus the objective lens of the microscope body to make the observed image clear; 步骤2:通过步进电机控制系统控制移动载物平台,改变移动载物平台z轴坐标,利用拍摄单元采集样本视频图像;Step 2: control the mobile carrier platform by the stepper motor control system, change the z-axis coordinate of the mobile carrier platform, and utilize the shooting unit to collect sample video images; 步骤3:对样本每一帧的视频图像进行清晰度评价计算,在移动载物平台z轴移动范围内通过一维线性优化法寻找清晰度评价函数极大值,记录为焦点近似点;Step 3: carry out the definition evaluation calculation to the video image of each frame of the sample, find the maximum value of the definition evaluation function by one-dimensional linear optimization method in the moving range of the z-axis of the moving object platform, and record it as a focus approximate point; 步骤4:将对焦图像及对应坐标上传至软件可视化窗口中,等待后续图像拼接;Step 4: upload the focused image and the corresponding coordinates to the software visualization window, and wait for subsequent image stitching; 步骤5:通过步进电机控制系统控制移动载物平台按固定步长沿xy轴平面按s形前进方向,每一个测量点处重复步骤2、步骤3和步骤4,直至软件界面端呈现完整的样本对焦拼接图像。Step 5: Control the moving object platform through the stepper motor control system according to the fixed step length along the xy-axis plane in the s-shaped forward direction, repeat steps 2, 3 and 4 at each measurement point until the software interface shows a complete Sample in-focus stitched images. 3.根据权利要求2所述的一种显微镜多视野自动对焦系统的使用方法,其特征在于,所述视频图像清晰度采用灰度值方差平均值作为评估函数进行测量,在处理器中计算得到该图像对比度值;所述移动载物平台在预先给定的z轴方向区间内先沿正方向移动,判断该距离内所拍图像清晰度评价函数的大小趋势,如果是递增的,则继续沿该方向移动并找出集合中最清晰的图像;如果是递减的,则向相反方向移动移动载物平台并对拍摄图像的清晰度进行计算,找出最清晰的图像。3. the using method of a kind of microscope multi-view auto-focusing system according to claim 2, is characterized in that, described video image sharpness adopts gray value variance mean value to measure as evaluation function, calculates in processor and obtains The image contrast value; the moving object platform first moves in the positive direction within the predetermined z-axis direction interval, and judges the size trend of the image sharpness evaluation function within the distance. If it is increasing, continue along the Move in that direction and find the sharpest image in the collection; if it is decreasing, move the moving stage in the opposite direction and calculate the sharpness of the captured image to find the sharpest image. 4.根据权利要求2所述的一种显微镜多视野自动对焦系统的使用方法,其特征在于,图像清晰度评估函数一维线性优化采用黄金分割法寻找该函数的极大值,比较所述移动载物平台z轴方向移动区间端点两位置的灰度值方差的平均值,并进行优化迭代,直至移动区间小于给定阈值,停止迭代,得到焦点的近似解,实现z方向上的自动对焦,并将对焦图像与对应三轴坐标进行保存。4. the using method of a kind of microscope multi-view autofocus system according to claim 2, is characterized in that, the one-dimensional linear optimization of image sharpness evaluation function adopts golden section method to find the maximum value of this function, compares described Move the average value of the variance of the gray values of the two end points of the moving interval in the z-axis direction of the platform, and perform optimization iteration until the moving interval is smaller than the given threshold, stop the iteration, obtain the approximate solution of the focus, and realize the automatic focusing in the z-direction , and save the focused image and the corresponding three-axis coordinates. 5.根据权利要求2所述的一种显微镜多视野自动对焦系统的使用方法,其特征在于,所述步进电机控制系统控制移动载物平台沿xy轴平面移动时,若在x轴方向给定一个位移偏量,则y轴方向坐标保持不变;若在y轴方向给定一个位移偏量,则x轴方向坐标保持不变;根据上述移动规则进行直线s形前进,实现平面上连续位置的扫描。5. The method of using a microscope multi-view autofocus system according to claim 2, wherein when the stepper motor control system controls the moving object platform to move along the xy-axis plane, if the If a displacement offset is given, the coordinates of the y-axis direction remain unchanged; if a displacement offset is given in the y-axis direction, the coordinates of the x-axis direction remain unchanged; according to the above moving rules, a straight line s-shaped forward is performed to achieve continuous on the plane. location scan.
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