CN115232816B - CRISPR system for constructing cataract model pig nuclear transfer donor cells with YAP1 gene mutation and application thereof - Google Patents

Abstract

This invention discloses a CRISPR system for constructing pig nuclear transfer donor cells for cataract models with YAP1 gene mutations and its applications. The invention provides the application of YAP1-gRNA2 (SEQ ID NO: 18), YAP1-gRNA3 (SEQ ID NO: 19), and NCN protein in a preparation kit; the kit is used for: preparing recombinant cells; preparing pig cataract models; preparing cataract cell models, cataract tissue models, or cataract organ models. This invention uses CRISPR/Cas9 technology combined with dual gRNA editing to knock out the YAP1 gene, simulating the natural pathogenesis and genetic characteristics of cataracts, and obtaining single-cell clones with the YAP1 gene knockout, laying the foundation for later breeding pig cataract models through somatic cell nuclear transfer animal cloning technology. This invention has significant application value for the development of cataract drugs and elucidating the pathogenesis of this disease.

Description

CRISPR system for constructing cataract model pig nuclear transfer donor cells with YAP1 gene mutation and application thereof

Technical Field

The invention belongs to the technical field of biology, in particular to the technical field of gene editing, and more particularly relates to a CRISPR system for constructing cataract model pig nuclear transfer donor cells with YAP1 gene mutation and application thereof.

Background

Cataract (Cataract) is the most common disease which leads to lens turbidity and finally leads to blindness, is the eye disease with the highest blindness causing rate in China, and the blindness causing rate reaches 47%. The occurrence of cataracts is the result of a combination of factors, the exact pathogenesis of which is not known. So far, cataract formation can be attributed to a combination of factors such as deregulated cell proliferation and apoptosis, abnormal lens fibroblast differentiation and enucleation, cell senescence, oxidative stress and upregulation of inflammatory factors in the eye, etc.

YAP1 is a downstream transcription factor of the Hippo signaling pathway (Hippo pathway) and is involved in development, growth, repair and homeostasis. Early researchers found that YAP1 was inactive under normal conditions of the Hippo signaling pathway, and YAP1 was super-active when some molecules in the Hippo signaling pathway were mutated. At this time, YAP1 in a super-activated state can promote cell proliferation, metastasis, survival and maintain stem cell activity. YAP1 has been shown to contribute to lens epithelial development, and among the developing lens proteins YAP1 is involved in the cell environment dependent transition from the proliferative state to the differentiated state by integrating cell density information. Heterozygous inactivation of YAP1 can lead to adult cataracts in mice.

So far, no medicine capable of treating cataract exists in the world, and some medicines can only play a role in slowing down the development of cataract, but cannot radically reverse the condition. Therefore, research on the mechanism of cataract development caused by YAP1 gene mutation and research on the corresponding medicines are urgent, and all the research needs to be carried out on the basis of animal models. The conventional animal model is a mouse model, however, the mouse has huge differences from human in the aspects of body type, organ size, physiology, pathology and the like, and can not truly simulate normal physiological and pathological states of human beings. The pig is used as a large animal, the body size and the physiological function of the pig are similar to those of human beings, the pig is easy to breed and raise on a large scale, and the pig has lower requirements on ethical moral aspects, animal protection and the like, so the pig is an ideal human disease model animal.

Gene editing is a biotechnology that has been greatly developed in recent years, and includes editing technologies from homologous recombination-based gene editing to nuclease-based ZFN, TALEN, CRISPR/Cas9 and the like, wherein CRISPR/Cas9 technology is currently the most advanced gene editing technology. Currently, gene editing techniques are increasingly applied to the production of animal models.

Disclosure of Invention

The invention aims to provide a CRISPR system for constructing a cataract model pig nuclear transfer donor cell with YAP1 gene mutation and application thereof.

The invention provides application of YAP1-gRNA2, YAP1-gRNA3 and NCN proteins in preparation of a kit.

The invention also provides application of YAP1-gRNA2, YAP1-gRNA3 and PRONCN proteins in preparation of a kit.

The invention also provides applications of YAP1-gRNA2, YAP1-gRNA3 and specific plasmids in preparation of the kit.

The invention also provides a method for preparing the recombinant cell, which comprises the following steps of co-transfecting YAP1-gRNA2, YAP1-gRNA3 and NCN proteins into a pig cell to obtain the recombinant cell.

The invention provides a kit comprising YAP1-gRNA2, YAP1-gRNA3 and NCN proteins.

The invention provides a kit comprising YAP1-gRNA2, YAP1-gRNA3 and PRONCN proteins.

The invention provides a kit which comprises YAP1-gRNA2, YAP1-gRNA3 and specific plasmids.

Any of the above kits further comprises pig cells.

The kit is used for preparing recombinant cells, (b) preparing a cataract model pig and (c) preparing a cataract cell model or a cataract tissue model or a cataract organ model.

The cotransfection adopts a specific electric shock transfection mode.

The parameters for electric shock transfection can be 1450V, 10ms, 3 pulses.

The cotransfection can be specifically performed by using a mammalian nuclear transfection kit (Neon kit, thermofisher) and a Neon TM transfection system electrotransfection apparatus.

The proportion of YAP1-gRNA2, YAP1-gRNA3 and NCN protein is 0.8-1.2 mug YAP1-gRNA2, 0.8-1.2 mug YAP1-gRNA3, 3-5 mug NCN protein.

The proportion of YAP1-gRNA2, YAP1-gRNA3 and NCN protein is 1 mug YAP1-gRNA2, 1 mug YAP1-gRNA3 and 4 mug NCN protein in sequence.

The proportion of the pig cells, YAP1-gRNA2, YAP1-gRNA3 and NCN protein is 10 ten thousand pig cells, 0.8-1.2 mug YAP1-gRNA2, 0.8-1.2 mug YAP1-gRNA3 and 3-5 mug NCN protein.

The proportion of pig cells, YAP1-gRNA2, YAP1-gRNA3 and NCN protein is 10 ten thousand pig cells, 1 mu gYAP-gRNA 2, 1 mu g YAP1-gRNA3 and 4 mu g NCN protein.

The YAP1-gRNA2 is sgRNA, and the target sequence binding region is shown as nucleotide numbers 3-22 in SEQ ID NO. 18.

Specifically, YAP1-gRNA2 is shown as SEQ ID NO. 18.

Specifically, YAP1-gRNA2 is shown as SEQ ID NO. 11.

The YAP1-gRNA3 is sgRNA, and the target sequence binding region is shown as nucleotide numbers 3-22 in SEQ ID NO. 19.

Specifically, YAP1-gRNA3 is shown as SEQ ID NO. 19.

Specifically, YAP1-gRNA3 is shown as SEQ ID NO. 12.

Any of the above NCN proteins is a Cas9 protein or a fusion protein with a Cas9 protein.

Specifically, the NCN protein is shown as SEQ ID NO. 3.

Any of the above-described porcine cells are porcine fibroblasts.

Any of the above described porcine cells are porcine primary fibroblasts.

The preparation method of the NCN protein comprises the following steps:

(1) Introducing plasmid pKG-GE4 into escherichia coli BL21 (DE 3) to obtain recombinant bacteria;

(2) Culturing the recombinant bacteria by adopting a liquid culture medium at 30 ℃, then adding IPTG, performing induction culture at 25 ℃, and then collecting the bacteria;

(3) Crushing the collected thalli, and collecting a crude protein solution;

(4) Purifying the His ₆ -tagged fusion protein from the crude protein solution using affinity chromatography;

(5) Cutting fusion protein with His ₆ label by enterokinase with His ₆ label, and removing protein with His ₆ label by Ni-NTA resin to obtain purified NCN protein;

The plasmid pKG-GE4 has the fusion gene shown in the 5209-9852 nucleotide in SEQ ID NO. 1.

The preparation method of the NCN protein specifically comprises the following steps:

(1) The plasmid pKG-GE4 was introduced into E.coli BL21 (DE 3) to obtain a recombinant strain.

(2) Inoculating the recombinant bacteria obtained in the step (1) to a liquid LB culture medium containing ampicillin, and carrying out shake culture;

(3) Inoculating the bacterial liquid obtained in the step (2) to a liquid LB culture medium, carrying out shaking culture at 30 ℃ and 230rpm until the OD _600nm value=1.0, then adding IPTG to ensure that the concentration of the IPTG in the system is 0.5mM, carrying out shaking culture at 25 ℃ and 230rpm for 12 hours, and then centrifuging to collect bacterial cells;

(4) Washing the thalli obtained in the step (3) with PBS buffer solution;

(5) Adding the thalli obtained in the step (4) into a crude extraction buffer solution, suspending the thalli, crushing the thalli, centrifugally collecting supernatant, filtering by adopting a filter membrane with the aperture of 0.22 mu m, and collecting filtrate;

(6) Purifying the His ₆ -tagged fusion protein (fusion protein shown in SEQ ID NO: 2) from the filtrate obtained in step (5) by affinity chromatography;

(7) Taking the post-column solution collected in the step (6), concentrating the post-column solution by using an ultrafiltration tube, and diluting the post-column solution by using 25mM Tris-HCl (pH 8.0);

(8) Adding the recombinant bovine enterokinase with His ₆ tag into the solution obtained in the step (7), and performing enzyme digestion;

(9) Uniformly mixing the solution obtained in the step (8) with Ni-NTA resin, incubating, and centrifuging to collect supernatant;

(10) Concentrating the supernatant obtained in the step (9) by using an ultrafiltration tube, and then adding the concentrated supernatant into an enzyme stock solution to obtain the NCN protein solution.

The specific method for purifying the His ₆ -tagged fusion protein from the filtrate obtained in step (5) by affinity chromatography is as follows:

The method comprises the steps of firstly, balancing a Ni-NTA agarose column by using 5 column volumes of balancing solution (the flow rate is 1 ml/min), then loading 50ml of filtrate obtained in the step (5) (the flow rate is 0.5-1 ml/min), then washing the column by using 5 column volumes of balancing solution (the flow rate is 1 ml/min), then washing the column by using 5 column volumes of buffer solution (the flow rate is 1 ml/min) to remove the impurity proteins, then eluting by using 10 column volumes of eluent at the flow rate of 0.5-1ml/min, and collecting post-column solution (90-100 ml).

Any one of the PRONCN proteins comprises the following elements, in order from upstream to downstream, a signal peptide, a chaperone protein, a protein tag, a protease cleavage site, a nuclear localization signal, a Cas9 protein and a nuclear localization signal.

The function of the signal peptide is to promote secretory expression of the protein. The signal peptide may be selected from the group consisting of an E.coli alkaline phosphatase (phoA) signal peptide, a Staphylococcus aureus protein A signal peptide, an E.coli outer membrane protein (ompa) signal peptide, or a signal peptide of any other prokaryotic gene, preferably alkaline phosphatase signal peptide (phoA SIGNAL PEPTIDE). The alkaline phosphatase signal peptide is used for guiding the secretion and expression of the target protein into the periplasmic cavity of the bacterium so as to be separated from the intracellular protein of the bacterium, and the target protein secreted into the periplasmic cavity of the bacterium is expressed in a soluble way and can be cracked by the signal peptidase in the periplasmic cavity of the bacterium.

The chaperone protein functions to increase the solubility of the protein. The chaperone may be any protein that aids in disulfide bond formation, preferably a thioredoxin (TrxA protein). Thioredoxin, which can serve as a molecular chaperone to help the co-expressed target protein (e.g., cas9 protein) form disulfide bonds, improving the stability of the protein, the correctness of folding, and increasing the solubility and activity of the target protein.

The function of the protein tag is for protein purification. The Tag may be a His Tag (His-Tag, his ₆ protein Tag), GST Tag, flag Tag, HA Tag, c-Myc Tag or any other protein Tag, more preferably a His Tag. His tag can be combined with Ni column, and target protein can be purified by one-step Ni column affinity chromatography, so that the purification process of target protein can be greatly simplified.

The protease cleavage site functions to cleave off the nonfunctional segment after purification to release the native form of Cas9 protein. The protease may be selected from enterokinase (Enterokinase), factor Xa, thrombin (Thrombin), TEV protease (TEV protease), HRV 3C protease (HRV 3C protease), WELQut protease or any other endoprotease, further preferably enterokinase. EK is enterokinase cleavage site, which is convenient for cutting fused TrxA-His segment by enterokinase to obtain the natural form Cas9 protein. After the commercial enterokinase enzyme digestion fusion protein with the His tag is used, the TrxA-His segment and the enterokinase with the His tag can be removed through one-time affinity chromatography to obtain the natural form of the Cas9 protein, so that the damage and the loss of the target protein caused by repeated purification and dialysis are avoided.

The nuclear localization signal may be any nuclear localization signal, preferably an SV40 nuclear localization signal and/or nucleoplasmin nuclear localization signal. NLS is a nuclear localization signal, and an NLS site is designed at the N end and the C end of Cas9 respectively, so that Cas9 can enter the nucleus more effectively for gene editing.

The Cas9 protein may be saCas or spCas9, preferably spCas9 protein.

The PRONCN protein is specifically shown as SEQ ID NO. 2.

The specific plasmid comprises the following elements, namely a promoter, an operator, a ribosome binding site, a PRONCN protein coding gene and a terminator from upstream to downstream.

The promoter may specifically be a T7 promoter. The T7 promoter is a prokaryotic expression strong promoter and can efficiently drive the expression of exogenous genes.

The operon may specifically be the Lac operon. The Lac operon is a regulatory element for lactose induced expression, and can induce the expression of the target protein at low temperature after bacteria grow to a certain amount, thereby avoiding the influence of the premature expression of the target protein on the growth of host bacteria, and remarkably improving the solubility of the expressed target protein by the induced expression at low temperature.

The ribosome binding site is a ribosome binding site for protein translation, and is necessary for protein translation.

The terminator may specifically be a T7 terminator. The T7 terminator can effectively terminate gene transcription at the tail end of the target gene, and prevent other downstream sequences except the target gene from being transcribed and translated.

For the codon of the spCas9 protein, the codon is optimized, so that the codon completely adapts to the codon preference of the E.coli BL21 (DE 3) strain for efficiently expressing the escherichia coli selected by the application, and the expression level of the Cas9 protein is improved.

The T7 promoter is shown as 5121-5139 nucleotides in SEQ ID NO. 1.

The Lac operon is shown as 5140-5164 nucleotides in SEQ ID NO. 1.

The ribosome binding site is shown as nucleotide 5178-5201 in SEQ ID NO. 1.

The coding sequence of the alkaline phosphatase signal peptide is shown as 5209-5271 nucleotides in SEQ ID NO. 1.

The coding sequence of the TrxA protein is shown as 5272-5598 nucleotide in SEQ ID NO. 1.

The coding sequence of His-Tag is shown as 5620-5637 nucleotide in SEQ ID NO. 1.

The coding sequence of the enterokinase enzyme cutting site is shown as 5638-5652 nucleotides in SEQ ID NO. 1.

The coding sequence of the nuclear localization signal is shown as 5656-5670 nucleotides in SEQ ID NO. 1.

The coding sequence of the spCas9 protein is shown as 5701-9801 nucleotide in SEQ ID NO. 1.

The coding sequence of the nuclear localization signal is shown as 9802-9849 nucleotides in SEQ ID NO. 1.

T7 terminator is shown as 9902-9949 nucleotides in SEQ ID NO. 1.

Specifically, the specific plasmid is plasmid pKG-GE4.

The plasmid pKG-GE4 has the DNA molecule shown in the 5121-9949 nucleotide of SEQ ID NO. 1.

Specifically, any one of the plasmids pKG-GE4 is shown as SEQ ID NO. 1.

The invention also protects the recombinant cells prepared by any one of the methods.

The invention also protects the application of the recombinant cells in preparing cataract model pigs.

And (3) taking the recombinant cells as nuclear transfer donor cells to clone somatic cells, so as to obtain cloned pigs, namely cataract model pigs.

The invention also protects pig tissues of a model pig prepared by the recombinant cells, namely a cataract tissue model.

The invention also protects a pig organ of a model pig prepared by the recombinant cells, namely a cataract organ model.

The invention also protects the pig cells of the model pig prepared by the recombinant cells, namely a cataract cell model.

The invention also protects the use of said recombinant cells, said cataract tissue model, said cataract organ model, said cataract cell model or said cataract model pig as follows (d 1) or (d 2) or (d 3) or (d 4):

(d1) Screening medicaments for treating cataract;

(d2) Performing drug effect evaluation of the cataract medicine;

(d3) Performing gene therapy and/or cell therapy efficacy evaluation of cataract;

(d4) The pathogenesis of cataract is studied.

Any of the above pigs may specifically be a from-river fragrant pig.

Any of the cataracts described above are caused by mutations in the YAP1 gene.

Pig YAP1 gene information, namely encoding YES1 related transcription factor 1, being located on chromosome 9 and having GeneID of 100622418,Sus scrofa.

The amino acid sequence of the pig YAP1 gene is shown as SEQ ID NO. 8.

The pig YAP1 gene has a DNA segment shown in SEQ ID NO. 9.

Any of the above recombinant cells is a recombinant cell in which YAP1 gene is mutated.

Any of the above mutations is a deletion and/or insertion and/or substitution of one or more nucleotides.

Any of the above recombinant cells is a heterozygous single cell clone.

The recombinant cells described above may specifically be single cell clones whose genotypes are heterozygous in table 1.

Compared with the prior art, the invention has at least the following beneficial effects:

(1) The subject (pig) of the invention has better applicability than other animals (rats, mice, primates).

Rodents such as rats and mice have great differences from humans in terms of body type, organ size, physiology, pathology and the like, and cannot truly simulate normal physiological and pathological states of humans. Studies have shown that more than 95% of drugs that are validated in mice are ineffective in human clinical trials. In the case of large animals, primates are animals with the closest relationship to humans, but are small in size, late in sexual maturity (mating begins at 6-7 years old), and single animals, the population expansion rate is extremely slow, and the raising cost is high. In addition, primate cloning is inefficient, difficult and costly.

The pig is an animal which has the closest relationship with human except primate, and has the similar body shape, weight, organ size and the like as human, and has the similar anatomical, physiological, immunological, nutritional metabolism, disease pathogenesis and the like as human. Meanwhile, the pigs are early in sexual maturity (4-6 months), have high fertility and have more piglets, and can form a larger group within 2-3 years. In addition, the cloning technology of pigs is very mature, and the cloning and feeding costs are much lower than those of primates. Pigs are thus very suitable animals as models of human diseases.

(2) The vector constructed by the invention uses a strong promoter T7-lac capable of efficiently expressing the target protein to express the target protein, and uses a signal peptide of bacterial periplasmic protein alkaline phosphatase (phoA) to guide the secretory expression of the target protein into a bacterial periplasmic cavity so as to separate from bacterial intracellular proteins, wherein the target protein secreted into the bacterial periplasmic cavity is expressed in a soluble way. Meanwhile, the fusion expression of the thioredoxin TrxA and the Cas9 protein is adopted, the TrxA can help the co-expressed target protein to form disulfide bonds, the stability and folding correctness of the protein are improved, and the solubility and activity of the target protein are increased. In order to facilitate purification of the target protein, a His tag is designed, and the target protein can be purified by one-step Ni column affinity chromatography, so that the purification process of the target protein is greatly simplified. Meanwhile, an enterokinase enzyme cutting site is designed behind the His tag, so that fused TrxA-His polypeptide fragments can be conveniently cut off, and the Cas9 protein in a natural form is obtained. After the fusion protein is digested by using the enterokinase with the His tag, the TrxA-His polypeptide fragment and the enterokinase with the His tag can be removed by one-time affinity chromatography to obtain the natural form of the Cas9 protein, thereby avoiding the damage and the loss of the target protein caused by multiple purification dialysis. Meanwhile, the N end and the C end of the Cas9 are respectively designed with an NLS site, so that the Cas9 can enter a cell nucleus more effectively for gene editing. In addition, the E.coli BL21 (DE 3) strain is selected as a target protein expression strain, and the strain can efficiently express and clone exogenous genes in an expression vector (such as pET-32 a) containing a phage T7 promoter. Meanwhile, the codon of the Cas9 protein is optimized, so that the codon is completely adapted to the codon preference of an expression strain, and the expression level of the target protein is improved. In addition, after bacteria grow to a certain quantity, the invention uses IPTG to induce the expression of the target protein at low temperature, thereby avoiding the influence of the premature expression of the target protein on the growth of host bacteria, and obviously improving the solubility of the expressed target protein by the induction expression at low temperature. Through the optimization design and experimental implementation, the activity of the obtained Cas9 protein is remarkably improved compared with that of commercial Cas9 protein.

(3) The gene editing is carried out by adopting the Cas9 high-efficiency protein combined in vitro transcribed gRNA constructed and expressed by the invention, and the optimal dosage proportion of Cas9 and gRNA is optimized, so that the single cell cloning rate of the gene editing is up to 83.7 percent, which is far higher than the conventional gene editing efficiency (10-30 percent).

(4) The target gene knockout monoclonal strain obtained by the invention is used for cloning somatic cell nuclear transfer animals, so that the cloned pig with the target gene knockout can be directly obtained, and the gene variation can be inherited stably.

The method of microinjection of gene editing material into fertilized ovum and embryo transplantation adopted in mouse model production is not suitable for large animal (such as pig) model production with longer gestation period because the probability of directly obtaining the offspring of gene mutation is low and the hybrid breeding of the offspring is needed. Therefore, the method for editing primary cells in vitro, cutting double gRNA and screening positive editing single cell clones with high technical difficulty and high challenges is adopted, and corresponding disease model pigs are directly obtained through somatic cell nuclear transfer animal cloning technology in the later period, so that the model pig manufacturing period can be greatly shortened, and manpower, material resources and financial resources are saved.

The invention adopts CRISPR/Cas9 technology and double gRNA editing to knock out YAP1 genes, simulates natural disease genetic characteristics of cataract, obtains single cell clone of YAP1 gene knockout, and lays a foundation for culturing cataract model pigs through somatic cell nuclear transfer animal cloning technology in later period. The invention is helpful for researching and disclosing the pathogenesis of cataract caused by YAP1 gene dysfunction, can also be used for researching drug screening, drug effect evaluation, gene therapy, cell therapy and the like, can provide effective experimental data for further clinical application, and further provides a powerful experimental means for successfully treating human cataract. The invention has great application value for research and development of cataract medicine and revealing pathogenesis of the cataract.

Drawings

FIG. 1 is a schematic diagram of the structure of plasmid pET-32 a.

FIG. 2 is a schematic diagram of the structure of plasmid pKG-GE 4.

FIG. 3 shows the results of reverse sequencing of the single cell clone No. 4 compared with the wild type sequence.

FIG. 4 shows the results of reverse sequencing of the single cell clone numbered 2 compared to the wild type sequence.

FIG. 5 shows the results of forward and reverse sequencing of the single cell clone numbered 1, along with the wild type sequence.

FIG. 6 shows the results of reverse sequencing of the single cell clone No. 6 compared to the wild type sequence.

FIG. 7 is an electrophoretogram of example 4 using ear tissue extracted genome of pig designated 1 as a template for PCR amplification using different primer pairs.

FIG. 8 is an electrophoretogram of PCR amplification using 18 pig genomic DNAs as templates and primer sets consisting of YAP1-E2g-JDF132 and YAP1-E2g-JDR570 in example 4.

FIG. 9 is an electropherogram showing comparison of editing efficiency for different combinations of targets in example 4.

FIG. 10 is an electrophoretogram of the optimization of the ratio of gRNA to NCN protein in example 5.

FIG. 11 is an electrophoretogram of the comparison of gene editing efficiency of NCN protein and commercial Cas9 protein in example 5.

Detailed Description

The following detailed description of the invention is provided in connection with the accompanying drawings that are presented to illustrate the invention and not to limit the scope thereof. The examples provided below are intended as guidelines for further modifications by one of ordinary skill in the art and are not to be construed as limiting the invention in any way.

The experimental methods in the following examples, unless otherwise specified, are conventional methods, and are carried out according to techniques or conditions described in the literature in the field or according to the product specifications. Materials, reagents and the like used in the examples described below are commercially available unless otherwise specified. The recombinant plasmids constructed in the examples were all subjected to sequencing verification. The commercial Cas9-A protein is a commercially available Cas9 protein with good effect. The commercial Cas9-B protein is a commercially available Cas9 protein with good effect. Complete medium (% by volume) 15% foetal calf serum (Gibco) +83% DMEM medium (Gibco) +1% Penicillin-Streptomycin (Gibco) +1% HEPES (Solarbio). Cell culture conditions were 37℃in a constant temperature incubator with 5% CO ₂、5％O₂.

Plasmid pKG-GE3 is a circular plasmid, as shown in SEQ ID NO. 2 of patent application 202010084343.6. In SEQ ID NO. 2 of patent application 202010084343.6, nucleotide 395-680 constitutes the CMV enhancer, nucleotide 682-890 constitutes the EF1a promoter, nucleotide 986-1006 encodes the Nuclear Localization Signal (NLS), nucleotide 1016-1036 encodes the Nuclear Localization Signal (NLS), nucleotide 1037-5161 encodes the Cas9 protein, nucleotide 5162-5209 encodes the Nuclear Localization Signal (NLS), nucleotide 5219-5266 encodes the Nuclear Localization Signal (NLS), nucleotide 5276-5332 encodes the cleavage polypeptide P2A (the amino acid sequence of cleavage polypeptide P2A is "ATNFSLLKQAGDVEENPGP", the cleavage site at which cleavage occurs between the first amino acid residue and the second amino acid residue from the C-terminus, nucleotide 5333-6046 encodes the EGFP protein, nucleotide 6056-6109 encodes the cleavage polypeptide T2A (the amino acid sequence of cleavage polypeptide T2A is "EGRGSLLTCGDVEENPGP", the cleavage site at which cleavage site occurs between the first amino acid residue from the C-terminus is "377", the amino acid sequence of cleavage site at which cleavage site is the nucleotide position of the cleavage site is "677", the amino acid sequence of nucleotide No. 3-7643 is the amino acid sequence of the cleavage site is encoded between the first amino acid residue from the first amino acid residue of the cleavage site of the cleavage element, nucleotide position 2A is "3782", the amino acid sequence of the cleavage element No. 2A is encoded between nucleotide No. 10-7 and the amino acid sequence of the polypeptide 11B is encoded by the polypeptide B. In SEQ ID NO. 2 of patent application 202010084343.6, nucleotides 911 to 6706 form a fusion gene, expressing a fusion protein. Due to the presence of the self-cleaving polypeptide P2A and the self-cleaving polypeptide T2A, the fusion protein spontaneously forms three proteins, a protein with Cas9 protein, a protein with EGFP protein and a protein with Puro protein.

The pKG-U6gRNA vector, i.e., plasmid pKG-U6gRNA, is a circular plasmid, as shown in SEQ ID NO. 3 of patent application 202010084343.6. In SEQ ID NO. 3 of patent application 202010084343.6, nucleotides 2280 to 2539 constitute the hU6 promoter and nucleotides 2558 to 2637 are used for transcription to form the gRNA backbone. When in use, a DNA molecule of about 20bp (target sequence binding region for transcription to form gRNA) is inserted into plasmid pKG-U6gRNA to form a recombinant plasmid, and the recombinant plasmid is transcribed in cells to obtain gRNA.

The primary fibroblasts of pigs used in the examples were prepared from the tissue of the ear of a Jiang Xiang pig from a first time. A method for preparing primary fibroblast of pig comprises collecting pig ear tissue 0.5g, removing hair and bone tissue, soaking in 75% alcohol for 30-40s, washing with PBS buffer containing 5% (volume ratio) Penicillin-Streptomycin (Gibco) for 5 times, washing once with PBS buffer, shearing tissue with ② scissors, digesting with 5mL of 0.1% collagenase solution (Sigma) at 37deg.C for 1 hr, centrifuging for 5min, discarding supernatant, resuspending the precipitate with 1mL of complete culture solution ③, spreading into 10mL of complete culture solution, sealing with 0.2% gelatin (VWR) plate, culturing until the cell grows to about 60% of the bottom of the plate, and culturing with trypsin after ④. For carrying out subsequent electrotransformation experiments.

Example 1 construction of prokaryotic Cas9 efficient expression vector

The structure of plasmid pET-32a is schematically shown in FIG. 1.

Plasmid pKG-GE4 was obtained by transformation with plasmid pET-32a as starting plasmid. The plasmid pET32a-T7lac-phoA is SP-TrxA-His-EK-NLS-spCas9-NLS-T7ter (called plasmid pKG-GE4 for short), is a circular plasmid as shown in SEQ ID NO. 1, and the structural schematic diagram is shown in figure 2.

In SEQ ID NO. 1, nucleotides 5121 to 5139 constitute the T7 promoter, nucleotides 5140 to 5164 encode the Lac operator (Lac operator), nucleotides 5178 to 5201 constitute the Ribosome Binding Site (RBS), nucleotides 5209 to 5271 encode the alkaline phosphatase signal peptide (phoA SIGNAL PEPTIDE), nucleotides 5272 to 5598 encode the TrxA protein, nucleotides 5620 to 5637 encode the His-Tag (also called His ₆ Tag), nucleotides 5638 to 5652 encode the enterokinase cleavage site (EK cleavage site), nucleotides 5656 to 5670 encode the nuclear localization signal, nucleotides 5701 to 9801 encode the Cas9 protein, nucleotides 9802 to 9849 encode the nuclear localization signal, and nucleotides 9902 to 9949 constitute the T7 terminator. The nucleotides encoding spCas9 protein have been codon optimized for the e.coli BL21 (DE 3) strain.

The plasmid pKG-GE4 is mainly modified by ① retaining the coding region of TrxA protein, which can help the expressed target protein form disulfide bond and increase the solubility and activity of the target protein, adding the coding sequence of alkaline phosphatase signal peptide before the coding region of TrxA protein, which can guide the expressed target protein to be secreted into the periplasm cavity of the bacterial membrane and be digested by prokaryotic periplasm signal peptide, ② adding the coding sequence of His-Tag after the coding sequence of TrxA protein, his-Tag can be used for enriching the expressed target protein, ③ adding the coding sequence of enterokinase enzyme cleavage site DDDDDDK (Asp-Asp-Asp-Lys) downstream of the coding sequence of His-Tag, the purified protein can remove His-Tag and the fused TrxA protein upstream under the action of enterokinase, ④ inserting the 9 genes expressed by the strain of escherichia coli BL21 (DE 3), and simultaneously adding the localization of the coding sequence of Cas-Tag at the upstream and downstream of the gene, and increasing the localization of the coding sequence.

The fusion gene in the plasmid pKG-GE4 is shown as 5209-9852 nucleotide in SEQ ID NO. 1, and encodes a fusion protein shown in SEQ ID NO. 2 (fusion protein TrxA-His-EK-NLS-spCas9-NLS, which is called PRONCN protein for short). Due to the presence of the alkaline phosphatase signal peptide and enterokinase cleavage site, the fusion protein is cleaved by enterokinase to form the protein shown in SEQ ID NO. 3, and the protein shown in SEQ ID NO. 3 is named NCN protein.

EXAMPLE 2 preparation and purification of NCN protein

1. Induction of expression

1. The plasmid pKG-GE4 was introduced into E.coli BL21 (DE 3) to obtain a recombinant strain.

2. The recombinant strain obtained in step 1 was inoculated into a liquid LB medium containing 100. Mu.g/ml ampicillin, and cultured overnight at 37℃under shaking at 200 rpm.

3. Inoculating the bacterial liquid obtained in the step2 to a liquid LB culture medium, culturing at 30 ℃ and 230rpm until the OD _600nm value=1.0, adding isopropyl thiogalactoside (IPTG) to ensure that the concentration of the isopropyl thiogalactoside in the system is 0.5mM, culturing at 25 ℃ and 230rpm for 12 hours, centrifuging at 4 ℃ and 10000g for 15 minutes, and collecting bacterial bodies.

4. And (3) washing the thalli obtained in the step (3) with PBS buffer solution.

2. Purification of fusion protein TrxA-His-EK-NLS-spCas9-NLS

1. And (3) adding the crude extraction buffer solution into the thalli obtained in the step one, suspending the thalli, crushing the thalli by using a homogenizer (1000 par circulation is performed three times), centrifuging at 4 ℃ and 15000g for 30min, collecting supernatant, filtering the supernatant by using a filter membrane with the aperture of 0.22 mu m, and collecting filtrate. In this step, 10ml of the crude extraction buffer was mixed per g of the wet cells.

The crude extraction buffer contained 20mM Tris-HCl (pH 8.0), 0.5M NaCl, 5mM Imidazole, 1mM PMSF, the balance ddH ₂ O.

2. The fusion protein was purified by affinity chromatography.

The method comprises the steps of firstly, balancing a Ni-NTA agarose column by using 5 column volumes of balancing solution (the flow rate is 1 ml/min), then loading 50ml of filtrate obtained in the step1 (the flow rate is 0.5-1 ml/min), then washing the column by using 5 column volumes of balancing solution (the flow rate is 1 ml/min), then washing the column by using 5 column volumes of buffer solution (the flow rate is 1 ml/min) to remove the impurity proteins, then eluting by using 10 column volumes of eluent at the flow rate of 0.5-1ml/min, and collecting post-column solution (90-100 ml).

Ni-NTA agarose column, gold Style, L00250/L00250-C, packing 10ml.

The equilibration solution contained 20mM Tris-HCl (pH 8.0), 0.5M NaCl, 5mM Imidazole, the balance ddH ₂ O.

Buffer containing 20mM Tris-HCl (pH 8.0), 0.5M NaCl, 50mM Imidazole, the balance ddH ₂ O.

The eluent contained 20mM Tris-HCl (pH 8.0), 0.5M NaCl, 500mM Imidazole, the remainder ddH ₂ O.

3. Cleavage of fusion protein TrxA-His-EK-NLS-spCas9-NLS and purification of NCN protein

1. 15Ml of the post-column solution collected in step two was concentrated to 200. Mu.l using an Amicon ultrafiltration tube (Sigma, UFC9100, capacity 15 ml) and then diluted to 1ml with 25mM Tris-HCl (pH 8.0). 6 ultrafiltration tubes were used to give a total of 6ml.

2. Commercial sources of recombinant bovine enterokinase (organisms, C620031, recombinant bovine enterokinase light chain, his ₆ tag, recombinant Bovine Enterokinase LIGHT CHAIN, his) with His ₆ tag were added to the solution (about 6 ml) obtained in step 1 and digested at 25 ℃ for 16 hours. 2 units of enterokinase were added in a ratio of 50. Mu.g protein.

3. The solution (about 6 ml) from step 2 was taken, mixed with 480. Mu.l of Ni-NTA resin (Kirsrui, L00250/L00250-C), spun at room temperature for 15min, centrifuged at 7000g for 3min, and the supernatant (4-5.5 ml) was collected.

4. The supernatant obtained in the step 3 was concentrated to 200. Mu.l using an Amicon ultrafiltration tube (Sigma, UFC9100, capacity: 15 ml), and then added to an enzyme stock solution to adjust the protein concentration to 5mg/ml, thereby obtaining an NCN protein solution.

The protein in NCN protein solution is sequenced, and 15 amino acid residues at the N end are shown in positions 1 to 15 of SEQ ID NO. 3, namely NCN protein.

The NCN proteins used in the subsequent examples were each provided by NCN protein solutions.

The enzyme stock solution (pH 7.4) contained 10mM Tris,300mM NaCl,0.1mM EDTA,1mM DTT,50% by volume of glycerol, the balance being ddH ₂ O.

EXAMPLE 3 preparation of YAP1 Gene knockout from Jiangxiang pig Single cell clone

Two high efficiency gRNA targets (YAP 1-E2-gRNA2 and YAP1-E2-gRNA 3) were selected for screening in example 4.

1. Preparation of gRNA

1. Preparation of YAP1-T7-gRNA2 transcription template and YAP1-T7-gRNA3 transcription template

YAP1-T7-gRNA2 transcription template is double-stranded DNA molecule, and is shown as SEQ ID NO. 16.

YAP1-T7-gRNA3 transcription template is double-stranded DNA molecule, and is shown as SEQ ID NO. 17.

2. In vitro transcription to obtain gRNA

YAP1-T7-gRNA2 transcription template is adopted, TRANSCRIPT AID T-HIGH YIELD Transcription Kit (Fermentas, K0441) is adopted for in vitro transcription, and MEGA CLEAR ^TM Transcription Clean-Up Kit (Thermo, AM 1908) is used for recovery and purification, so that YAP1-gRNA2 is obtained. YAP1-gRNA2 is single-stranded RNA, as shown in SEQ ID NO. 18.

YAP1-gRNA2(SEQ ID NO:18):

GGUGAUGAUGUACCUCUGCCAGGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUUU

YAP1-T7-gRNA3 transcription template is adopted, TRANSCRIPT AID T-HIGH YIELD Transcription Kit (Fermentas, K0441) is adopted for in vitro transcription, and MEGA CLEAR ^TM Transcription Clean-Up Kit (Thermo, AM 1908) is used for recovery and purification, so that YAP1-gRNA3 is obtained. YAP1-gRNA3 is single stranded RNA, as shown in SEQ ID NO. 19.

YAP1-gRNA3(SEQ ID NO:19):

GGAGAUAUGGCUCCCAGCUGCAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUUU

2. Transfection of porcine primary fibroblasts

1. YAP1-gRNA2, YAP1-gRNA3 and NCN proteins were co-transfected into porcine primary fibroblasts. The ratio was about 10 ten thousand porcine primary fibroblasts 1. Mu.g YAP1-gRNA 21. Mu.g YAP1-gRNA3 4. Mu.g NCN protein. Co-transfection was performed by electric shock transfection using a mammalian nuclear transfection kit (Neon kit, thermofisher) and a Neon TM transfection system electrotransfection apparatus (parameters set to 1450V, 10ms, 3 pulses).

2. After the step 1 is completed, the culture is carried out for 16 to 18 hours by adopting the complete culture solution, and then the culture is carried out by replacing the new complete culture solution. The total incubation time after electrotransformation was 48 hours.

3. After completion of step 2, the cells were digested with trypsin and collected, then washed with complete medium, then resuspended with complete medium, and then each individual monoclonal was individually picked and transferred to 96-well plates (1 cell per well, 100 μl of complete medium per well) and cultured for 2 weeks (new complete medium was changed every 2-3 days).

4. After completion of step 3, cells were digested with trypsin and collected (about 2/3 of the resulting cells per well were inoculated into 6-well plates filled with complete culture medium, and the remaining 1/3 were collected in 1.5mL centrifuge tubes).

5. The 6-well plate of step 4 was used to culture until the cells grew to 80% confluence, the cells were digested with trypsin and collected, and the cells were frozen using cell frozen stock (90% complete medium+10% dmso, volume ratio).

6. Taking the centrifuge tube in the step 4, taking cells, performing cell lysis, extracting genome DNA, performing PCR amplification by using a primer pair consisting of YAP1-E2g-JDF132 and YAP1-E2g-JDR570 (the primer sequence is shown in the example 4), and then performing electrophoresis. Porcine primary fibroblasts were used as wild-type control (WT).

7. After step 6 is completed, the PCR amplification product is recovered and sequenced.

The sequencing result of the primary fibroblast cells of pigs only has one, and the genotype of the primary fibroblast cells is wild type (also called homozygous wild type). If there are two types of single cell clones, one is identical to the sequencing result of the pig primary fibroblast, the other is mutated (mutation comprises deletion, insertion or substitution of one or more nucleotides) compared with the sequencing result of the pig primary fibroblast, the genotype of the single cell clone is heterozygous, if the sequencing result of the single cell clone is two types, the genotype of the single cell clone is a double allele different mutant type if the mutation comprises deletion, insertion or substitution of one or more nucleotides compared with the sequencing result of the pig primary fibroblast, if the sequencing result of the single cell clone is one type and the mutation (mutation comprises deletion, insertion or substitution of one or more nucleotides) compared with the sequencing result of the pig primary fibroblast, the genotype of the single cell clone is the same mutant type as the double allele, if the sequencing result of the single cell clone is one type and is identical with the sequencing result of the pig primary fibroblast, the genotype of the single cell clone is the wild type (can also be referred to as the wild type).

The results are shown in Table 1. The genotypes of the single cell clones numbered 4, 9, 13, 16, 20, 24, 34 were wild type. The genotypes of the single-cell clones numbered 2,3, 8, 11, 15, 19, 23, 25, 29, 31, 35, 37, 41, 43 were heterozygous. The genotypes of the single cell clones numbered 1, 5, 7, 12, 14, 18, 22, 26, 28, 30, 32, 33, 36, 38, 40, 42 were double allelic variant. The genotypes of the single cell clones numbered 6, 10, 17, 21, 27, 39 are double allelic identical mutants. The rate of YAP1 gene editing single cell clone was 83.7%.

Exemplary sequencing alignment results are shown in fig. 3-6. FIG. 3 shows the result of comparison of the forward sequence of clone No. 4 with the wild-type sequence, and the result is judged to be wild-type. FIG. 4 shows the result of comparison of the forward sequence of clone No. 2 with the wild-type sequence, and the result is judged as heterozygous. FIG. 5 shows the results of the forward and reverse sequencing of clone No. 1, with the wild type sequence being a variant of the biallelic variant. FIG. 6 shows the results of the forward sequencing of clone No. 6 compared with the wild type sequence, which is a double allele identical mutant.

TABLE 1 genotyping results of YAP1 Gene editing Single cell clones

The heterozygous single cell clone can be used for subsequent cloned pig production. And (3) taking the cells as nuclear transfer donor cells to clone somatic cells, thus obtaining cloned pigs, namely cataract model pigs.

Example 4 screening of YAP1 Gene efficient gRNA targets

Pig YAP1 gene information, namely encoding YES1 related transcription factor 1, being located on chromosome 9 and having GeneID of 100622418,Sus scrofa. The amino acid sequence of the protein coded by the pig YAP1 gene is shown as SEQ ID NO. 8. In the pig genome DNA, YAP1 gene has 9 exons, and its partial sequence (containing 2 nd exon and its upstream and downstream partial nucleotides) is shown in SEQ ID No. 9.

1. YAP1 gene preset deletion region and adjacent genome sequence conservation analysis

18 From Jiangxiang pigs, of which 10 females (designated 1,2, 3,4, 5, 6, 7, 8, 9, 10 respectively) and 8 males (designated A, B, C, D, E, F, G, H respectively) were bred.

YAP1-E2g-JDF50:ACTCATACTGTCTTGGCCTTTAC;

YAP1-E2g-JDR501:CATCATTATTTTCACTTACTTTA;

YAP1-E2g-JDF132:ATTTGTCTTTGGTATTTAGAGTT;

YAP1-E2g-JDR570:TTTATATTTTGGTACCACCTATG。

The genome was extracted from ear tissue of swine designated as 1 as a template, and PCR amplification was performed using different primer pairs, followed by 1% agarose gel electrophoresis. The electrophoresis pattern is shown in FIG. 7. In FIG. 7, group 1 was a primer set comprising YAP1-E2g-JDF50 and YAP1-E2g-JDR570, group 2 was a primer set comprising YAP1-E2g-JDF50 and YAP1-E2g-JDR501, group 3 was a primer set comprising YAP1-E2g-JDF132 and YAP1-E2g-JDR570, and group 4 was a primer set comprising YAP1-E2g-JDF132 and YAP1-E2g-JDR 501. As a result, it was found that the target fragment was amplified preferably using a primer set consisting of YAP1-E2g-JDF132 and YAP1-E2g-JDR 570.

PCR amplification was performed using 18 pig genomic DNAs as templates, respectively, using a primer set composed of YAP1-E2g-JDF132 and YAP1-E2g-JDR570, followed by 1% agarose gel electrophoresis. The electrophoresis pattern is shown in FIG. 8. And (3) recovering PCR amplification products, sequencing, and comparing the sequencing results with YAP1 gene sequences in a public database for analysis. The conserved regions common to 18 pigs were selected for the design of the gRNA targets.

2. Screening target

Several targets were initially screened by screening NGG (avoiding possible mutation sites), from which 6 targets were further screened by pre-experiments.

The 6 targets were as follows:

YAP1-E2-gRNA1:GCCAGAGACTACTCCAGTGG;

YAP1-E2-gRNA2:TGATGATGTACCTCTGCCAG;

YAP1-E2-gRNA3:AGATATGGCTCCCAGCTGCA;

YAP1-E2-gRNA4:TCTCAAAAGAAGACTGTCGA;

YAP1-E2-gRNA5:AGCTGGGAGCCATATCTCCT;

YAP1-E2-gRNA6:CTGTCGAAGGTGTTGAGCAG。

3. Preparation of gRNA

Plasmid pKG-U6gRNA was taken and digested with restriction enzyme BbsI, and the vector backbone (about 3kb linear fragment) was recovered.

YAP1-E2-gRNA1-S and YAP1-E2-gRNA1-A were synthesized, respectively, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 1). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 1) expresses the sgRNA _{YAP1-E2-gRNA1} shown in SEQ ID NO. 10.

sgRNA_{YAP1-E2-gRNA1}(SEQ ID NO:10):

GCCAGAGACUACUCCAGUGGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA2-S and YAP1-E2-gRNA2-A were synthesized separately, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 2). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 2) expresses the sgRNA _{YAP1-E2-gRNA2} shown in SEQ ID NO. 11.

sgRNA_{YAP1-E2-gRNA2}(SEQ ID NO:11):

UGAUGAUGUACCUCUGCCAGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA3-S and YAP1-E2-gRNA3-A were synthesized separately, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 3). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 3) expresses the sgRNA _{YAP1-E2-gRNA3} shown in SEQ ID NO. 12.

sgRNA_{YAP1-E2-gRNA3}(SEQ ID NO:12):

AGAUAUGGCUCCCAGCUGCAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA4-S and YAP1-E2-gRNA4-A were synthesized separately, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 4). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 4) expresses the sgRNA _{YAP1-E2-gRNA4} shown in SEQ ID NO. 13.

sgRNA_{YAP1-E2-gRNA4}(SEQ ID NO:13):

UCUCAAAAGAAGACUGUCGAguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA5-S and YAP1-E2-gRNA5-A were synthesized separately, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 5). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 5) expresses the sgRNA _{YAP1-E2-gRNA5} shown in SEQ ID NO. 14.

sgRNA_{YAP1-E2-gRNA5}(SEQ ID NO:14):

AGCUGGGAGCCAUAUCUCCUguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA6-S and YAP1-E2-gRNA6-A were synthesized separately, and then mixed and annealed to give double-stranded DNA molecules having cohesive ends. The double-stranded DNA molecule having a cohesive end was ligated to the vector backbone to obtain plasmid pKG-U6gRNA (YAP 1-E2-gRNA 6). Plasmid pKG-U6gRNA (YAP 1-E2-gRNA 6) expresses the sgRNA _{YAP1-E2-gRNA6} shown in SEQ ID NO. 15.

sgRNA_{YAP1-E2-gRNA6}(SEQ ID NO:15):

CUGUCGAAGGUGUUGAGCAGguuuuagagcuagaaauagcaaguuaaaauaaggcuaguccguuaucaacuugaaaaaguggcaccgagucggugcuuuu

YAP1-E2-gRNA1-S:caccGCCAGAGACTACTCCAGTGG;

YAP1-E2-gRNA1-A:aaacCCACTGGAGTAGTCTCTGGC;

YAP1-E2-gRNA2-S:caccgTGATGATGTACCTCTGCCAG;

YAP1-E2-gRNA2-A:aaacCTGGCAGAGGTACATCATCAc;

YAP1-E2-gRNA3-S:caccgAGATATGGCTCCCAGCTGCA;

YAP1-E2-gRNA3-A:aaacTGCAGCTGGGAGCCATATCTc;

YAP1-E2-gRNA4-S:caccgTCTCAAAAGAAGACTGTCGA;

YAP1-E2-gRNA4-A:aaacTCGACAGTCTTCTTTTGAGAc;

YAP1-E2-gRNA5-S:caccgAGCTGGGAGCCATATCTCCT;

YAP1-E2-gRNA5-A:aaacAGGAGATATGGCTCCCAGCTc;

YAP1-E2-gRNA6-S:caccgCTGTCGAAGGTGTTGAGCAG;

YAP1-E2-gRNA6-A:aaacCTGCTCAACACCTTCGACAGc。

YAP1-E2-gRNA1-S、YAP1-E2-gRNA1-A、YAP1-E2-gRNA2-S、YAP1-E2-gRNA2-A、YAP1-E2-gRNA3-S、YAP1-E2-gRNA3-A、YAP1-E2-gRNA4-S、YAP1-E2-gRNA4-A、YAP1-E2-gRNA5-S、YAP1-E2-gRNA5-A、YAP1-E2-gRNA6-S、YAP1-E2-gRNA6-A Are all single-stranded DNA molecules.

4. Editing efficiency comparison of different target combinations

1. Co-transfection

The first group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 1) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 1) 1.08. Mu.g plasmid pKG-GE3.

The second group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 2) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 2) 1.08. Mu.g plasmid pKG-GE3.

The third group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 3) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 3) 1.08. Mu.g plasmid pKG-GE3.

The fourth group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 4) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 4) 1.08. Mu.g plasmid pKG-GE3.

The fifth group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 5) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 5) 1.08. Mu.g plasmid pKG-GE3.

The sixth group was to cotransfect plasmid pKG-U6gRNA (YAP 1-E2-gRNA 6) and plasmid pKG-GE3 into porcine primary fibroblasts. The ratio was about 20 ten thousand primary swine fibroblasts, 0.92. Mu.g plasmid pKG-U6gRNA (YAP 1-E2-gRNA 6) 1.08. Mu.g plasmid pKG-GE3.

And seventh group, pig primary fibroblast, and performing electrotransformation operation without adding plasmid according to the same electrotransformation parameters.

Co-transfection was performed by electric shock transfection using a mammalian nuclear transfection kit (Neon kit, thermofisher) and a Neon TM transfection system electrotransfection apparatus (parameters set to 1450V, 10ms, 3 pulses).

2. After the step 1 is completed, the culture is carried out for 12 to 18 hours by adopting the complete culture solution, and then the culture is carried out by replacing the new complete culture solution. The total incubation time after electrotransformation was 48 hours.

3. After the completion of step 2, cells were digested and collected with trypsin, lysed, genomic DNA was extracted, PCR amplification was performed using a primer set consisting of YAP1-E2g-JDF132 and YAP1-E2g-JDR570, followed by 1% agarose gel electrophoresis. The mutation condition of the target gene of the cell is detected, and the electrophoresis chart is shown in figure 9.

And cutting and recovering a target product, sending the target product to a sequencing company for sequencing, and analyzing a sequencing peak diagram of a sequencing result by using a webpage Synthego ICE tool to obtain the gene editing efficiency of different targets. The gene editing efficiency of the first group to the sixth group was 27%, 37%, 44%, 10%, 7%, 13% in this order, and the seventh group did not undergo gene editing. The results show that YAP1-E2-gRNA2 and YAP1-E2-gRNA3 have higher editing efficiency.

Example 5 Performance of NCN protein

The selection of 2 gRNA targets targeting TTN genes was as follows:

TTN-gRNA1:AGAGCACAGTCAGCCTGGCG;

TTN-gRNA2:CTTCCAGAATTGGATCTCCG。

The primers used to identify the target fragment comprising the gRNA in the TTN gene were as follows:

TTN-F55:TACGGAATTGGGGAGCCAGCGGA;

TTN-R560:CAAAGTTAACTCTCTGTGTCT。

1. Preparation of gRNA

1. Preparation of TTN-T7-gRNA1 transcription template and TTN-T7-gRNA2 transcription template

The TTN-T7-gRNA1 transcription template is a double-stranded DNA molecule, and is shown as SEQ ID NO. 4.

The TTN-T7-gRNA2 transcription template is a double-stranded DNA molecule, and is shown as SEQ ID NO. 5.

2. In vitro transcription to obtain gRNA

TTN-T7-gRNA1 transcription template is adopted, TRANSCRIPT AID T7 HIGH YIELD Transcription Kit (Fermentas, K0441) is adopted for in vitro transcription, and then MEGA CLEAR ^TM Transcription Clean-Up Kit (Thermo, AM 1908) is used for recovery and purification, so that TTN-gRNA1 is obtained. TTN-gRNA1 is single-stranded RNA, and is shown in SEQ ID NO. 6.

TTN-T7-gRNA2 transcription template is adopted, TRANSCRIPT AID T7 HIGH YIELD Transcription Kit (Fermentas, K0441) is adopted for in vitro transcription, and then MEGA CLEAR ^TM Transcription Clean-Up Kit (Thermo, AM 1908) is used for recovery and purification, so that TTN-gRNA2 is obtained. TTN-gRNA2 is single-stranded RNA, as shown in SEQ ID NO. 7.

2. Optimization of dosage proportion of gRNA and NCN proteins

1. Co-transfected porcine primary fibroblasts

The first group was to co-transfect porcine primary fibroblasts with TTN-gRNA1, TTN-gRNA2 and NCN proteins. The ratio was about 10 ten thousand porcine primary fibroblasts with 0.5. Mu.g TTN-gRNA1, 0.5. Mu.g TTN-gRNA2, 4. Mu.g NCN protein.

The second group is to co-transfect porcine primary fibroblasts with TTN-gRNA1, TTN-gRNA2 and NCN proteins. The ratio was about 10 ten thousand porcine primary fibroblasts 0.75. Mu.g TTN-gRNA1 0.75. Mu.g TTN-gRNA2 4. Mu.g NCN protein.

Third group, porcine primary fibroblasts were co-transfected with TTN-gRNA1, TTN-gRNA2 and NCN proteins. The ratio is about 10 ten thousand porcine primary fibroblasts 1 μg TTN-gRNA 24 μg NCN protein.

Fourth group, porcine primary fibroblasts were co-transfected with TTN-gRNA1, TTN-gRNA2 and NCN proteins. The ratio was about 10 ten thousand porcine primary fibroblasts 1.25. Mu.g TTN-gRNA 1:1.25. Mu.g TTN-gRNA 2:4. Mu.g NCN protein.

And fifth group, co-transfecting the TTN-gRNA1 and the TTN-gRNA2 into the primary fibroblast of the pig. The ratio is about 10 ten thousand pig primary fibroblasts 1 mug TTN-gRNA1 and 1 mug TTN-gRNA2.

Co-transfection was performed by electric shock transfection using a mammalian nuclear transfection kit (Neon kit, thermofisher) and a Neon TM transfection system electrotransfection apparatus (parameters set to 1450V, 10ms, 3 pulses).

2. After the step 1 is completed, the culture is carried out for 12 to 18 hours by adopting the complete culture solution, and then the culture is carried out by replacing the new complete culture solution. The total incubation time after electrotransformation was 48 hours.

3. After the step 2 is completed, cells are digested and collected by trypsin, genomic DNA is extracted, PCR amplification is performed by using a primer pair consisting of TTN-F55 and TTN-R560, and then 1% agarose gel electrophoresis is performed.

The electrophoresis pattern is shown in FIG. 10. The 505bp band is wild type band (WT), and the 254bp band (about 251bp of the 505bp theoretical deletion of the wild type band) is deletion mutation band (MT).

Gene deletion mutation efficiency = (MT gray scale/MT band bp number)/(WT gray scale/WT band bp number + MT gray scale/MT band bp number) ×100%. The first group of gene deletion mutation efficiency was 19.9%, the second group of gene deletion mutation efficiency was 39.9%, the third group of gene deletion mutation efficiency was 79.9%, and the fourth group of gene deletion mutation efficiency was 44.3%. The fifth group had no mutation.

The results show that the gene editing efficiency is highest when the mass ratio of the two gRNAs to the NCN protein is 1:1:4, and the actual dosage is 1 mug to 4 mug. Thus, the optimum amount of the two gRNAs and NCN protein was determined to be 1. Mu.g/4. Mu.g.

3. Comparison of Gene editing efficiency of NCN protein and commercial Cas9 protein

1. Co-transfected porcine primary fibroblasts

Cas9-A group TTN-gRNA1, TTN-gRNA2 and commercial Cas9-A protein were co-transfected into porcine primary fibroblasts. The ratio is about 10 ten thousand pig primary fibroblasts with 1 mug TTN-gRNA1 to 1 mug TTN-gRNA2 to 4 mug Cas9-A protein.

The pKG-GE4 group was prepared by cotransfecting porcine primary fibroblasts with TTN-gRNA1, TTN-gRNA2 and NCN proteins. The ratio is about 10 ten thousand porcine primary fibroblasts 1 μg TTN-gRNA 24 μg NCN protein.

Cas9-B group TTN-gRNA1, TTN-gRNA2 and commercial Cas9-B protein were co-transfected into porcine primary fibroblasts. The ratio is about 10 ten thousand pig primary fibroblasts with 1 mug TTN-gRNA1 to 1 mug TTN-gRNA2 to 4 mug Cas9-B protein.

Control group TTN-gRNA1, TTN-gRNA2 were co-transfected into porcine primary fibroblasts. The ratio is about 10 ten thousand pig primary fibroblasts 1 mug TTN-gRNA1 and 1 mug TTN-gRNA2.

Co-transfection was performed by electric shock transfection using a mammalian nuclear transfection kit (Neon kit, thermofisher) and a Neon TM transfection system electrotransfection apparatus (parameters set to 1450V, 10ms, 3 pulses).

2. After the step 1 is completed, the culture is carried out for 12 to 18 hours by adopting the complete culture solution, and then the culture is carried out by replacing the new complete culture solution. The total incubation time after electrotransformation was 48 hours.

3. After the step 2 is completed, cells are digested and collected by trypsin, genomic DNA is extracted, PCR amplification is performed by using a primer pair consisting of TTN-F55 and TTN-R560, and then 1% agarose gel electrophoresis is performed.

The electrophoresis pattern is shown in FIG. 11. The gene deletion mutation efficiency of the commercial Cas9-A protein is 28.5%, the gene deletion mutation efficiency of the NCN protein is 85.6%, and the gene deletion mutation efficiency of the commercial Cas9-B protein is 16.6%.

The results show that compared with the commercial Cas9 protein, the NCN protein prepared by the method provided by the invention has the advantage that the gene editing efficiency is obviously improved.

The present application is described in detail above. It will be apparent to those skilled in the art that the present application can be practiced in a wide range of equivalent parameters, concentrations, and conditions without departing from the spirit and scope of the application and without undue experimentation. While the application has been described with respect to specific embodiments, it will be appreciated that the application may be further modified. In general, this application is intended to cover any variations, uses, or adaptations of the application following, in general, the principles of the application and including such departures from the present disclosure as come within known or customary practice within the art to which the application pertains. The application of some of the basic features may be done in accordance with the scope of the claims that follow.

Sequence listing

<110> Nanjing Kidney Gene engineering Co., ltd

<120> CRISPR System for constructing cataract model pig Nuclear transplantation donor cells mutated by YAP1 Gene and application thereof

<130> GNCYX212444

<160> 19

<170> SIPOSequenceListing 1.0

<210> 1

<211> 9974

<212> DNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 1

tggcgaatgg gacgcgccct gtagcggcgc attaagcgcg gcgggtgtgg tggttacgcg 60

cagcgtgacc gctacacttg ccagcgccct agcgcccgct cctttcgctt tcttcccttc 120

ctttctcgcc acgttcgccg gctttccccg tcaagctcta aatcgggggc tccctttagg 180

gttccgattt agtgctttac ggcacctcga ccccaaaaaa cttgattagg gtgatggttc 240

acgtagtggg ccatcgccct gatagacggt ttttcgccct ttgacgttgg agtccacgtt 300

ctttaatagt ggactcttgt tccaaactgg aacaacactc aaccctatct cggtctattc 360

ttttgattta taagggattt tgccgatttc ggcctattgg ttaaaaaatg agctgattta 420

acaaaaattt aacgcgaatt ttaacaaaat attaacgttt acaatttcag gtggcacttt 480

tcggggaaat gtgcgcggaa cccctatttg tttatttttc taaatacatt caaatatgta 540

tccgctcatg agacaataac cctgataaat gcttcaataa tattgaaaaa ggaagagtat 600

gagtattcaa catttccgtg tcgcccttat tccctttttt gcggcatttt gccttcctgt 660

ttttgctcac ccagaaacgc tggtgaaagt aaaagatgct gaagatcagt tgggtgcacg 720

agtgggttac atcgaactgg atctcaacag cggtaagatc cttgagagtt ttcgccccga 780

agaacgtttt ccaatgatga gcacttttaa agttctgcta tgtggcgcgg tattatcccg 840

tattgacgcc gggcaagagc aactcggtcg ccgcatacac tattctcaga atgacttggt 900

tgagtactca ccagtcacag aaaagcatct tacggatggc atgacagtaa gagaattatg 960

cagtgctgcc ataaccatga gtgataacac tgcggccaac ttacttctga caacgatcgg 1020

aggaccgaag gagctaaccg cttttttgca caacatgggg gatcatgtaa ctcgccttga 1080

tcgttgggaa ccggagctga atgaagccat accaaacgac gagcgtgaca ccacgatgcc 1140

tgcagcaatg gcaacaacgt tgcgcaaact attaactggc gaactactta ctctagcttc 1200

ccggcaacaa ttaatagact ggatggaggc ggataaagtt gcaggaccac ttctgcgctc 1260

ggcccttccg gctggctggt ttattgctga taaatctgga gccggtgagc gtgggtctcg 1320

cggtatcatt gcagcactgg ggccagatgg taagccctcc cgtatcgtag ttatctacac 1380

gacggggagt caggcaacta tggatgaacg aaatagacag atcgctgaga taggtgcctc 1440

actgattaag cattggtaac tgtcagacca agtttactca tatatacttt agattgattt 1500

aaaacttcat ttttaattta aaaggatcta ggtgaagatc ctttttgata atctcatgac 1560

caaaatccct taacgtgagt tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa 1620

aggatcttct tgagatcctt tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc 1680

accgctacca gcggtggttt gtttgccgga tcaagagcta ccaactcttt ttccgaaggt 1740

aactggcttc agcagagcgc agataccaaa tactgtcctt ctagtgtagc cgtagttagg 1800

ccaccacttc aagaactctg tagcaccgcc tacatacctc gctctgctaa tcctgttacc 1860

agtggctgct gccagtggcg ataagtcgtg tcttaccggg ttggactcaa gacgatagtt 1920

accggataag gcgcagcggt cgggctgaac ggggggttcg tgcacacagc ccagcttgga 1980

gcgaacgacc tacaccgaac tgagatacct acagcgtgag ctatgagaaa gcgccacgct 2040

tcccgaaggg agaaaggcgg acaggtatcc ggtaagcggc agggtcggaa caggagagcg 2100

cacgagggag cttccagggg gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca 2160

cctctgactt gagcgtcgat ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa 2220

cgccagcaac gcggcctttt tacggttcct ggccttttgc tggccttttg ctcacatgtt 2280

ctttcctgcg ttatcccctg attctgtgga taaccgtatt accgcctttg agtgagctga 2340

taccgctcgc cgcagccgaa cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga 2400

gcgcctgatg cggtattttc tccttacgca tctgtgcggt atttcacacc gcatatatgg 2460

tgcactctca gtacaatctg ctctgatgcc gcatagttaa gccagtatac actccgctat 2520

cgctacgtga ctgggtcatg gctgcgcccc gacacccgcc aacacccgct gacgcgccct 2580

gacgggcttg tctgctcccg gcatccgctt acagacaagc tgtgaccgtc tccgggagct 2640

gcatgtgtca gaggttttca ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct 2700

catcagcgtg gtcgtgaagc gattcacaga tgtctgcctg ttcatccgcg tccagctcgt 2760

tgagtttctc cagaagcgtt aatgtctggc ttctgataaa gcgggccatg ttaagggcgg 2820

ttttttcctg tttggtcact gatgcctccg tgtaaggggg atttctgttc atgggggtaa 2880

tgataccgat gaaacgagag aggatgctca cgatacgggt tactgatgat gaacatgccc 2940

ggttactgga acgttgtgag ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa 3000

aaatcactca gggtcaatgc cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta 3060

gccagcagca tcctgcgatg cagatccgga acataatggt gcagggcgct gacttccgcg 3120

tttccagact ttacgaaaca cggaaaccga agaccattca tgttgttgct caggtcgcag 3180

acgttttgca gcagcagtcg cttcacgttc gctcgcgtat cggtgattca ttctgctaac 3240

cagtaaggca accccgccag cctagccggg tcctcaacga caggagcacg atcatgcgca 3300

cccgtggggc cgccatgccg gcgataatgg cctgcttctc gccgaaacgt ttggtggcgg 3360

gaccagtgac gaaggcttga gcgagggcgt gcaagattcc gaataccgca agcgacaggc 3420

cgatcatcgt cgcgctccag cgaaagcggt cctcgccgaa aatgacccag agcgctgccg 3480

gcacctgtcc tacgagttgc atgataaaga agacagtcat aagtgcggcg acgatagtca 3540

tgccccgcgc ccaccggaag gagctgactg ggttgaaggc tctcaagggc atcggtcgag 3600

atcccggtgc ctaatgagtg agctaactta cattaattgc gttgcgctca ctgcccgctt 3660

tccagtcggg aaacctgtcg tgccagctgc attaatgaat cggccaacgc gcggggagag 3720

gcggtttgcg tattgggcgc cagggtggtt tttcttttca ccagtgagac gggcaacagc 3780

tgattgccct tcaccgcctg gccctgagag agttgcagca agcggtccac gctggtttgc 3840

cccagcaggc gaaaatcctg tttgatggtg gttaacggcg ggatataaca tgagctgtct 3900

tcggtatcgt cgtatcccac taccgagatg tccgcaccaa cgcgcagccc ggactcggta 3960

atggcgcgca ttgcgcccag cgccatctga tcgttggcaa ccagcatcgc agtgggaacg 4020

atgccctcat tcagcatttg catggtttgt tgaaaaccgg acatggcact ccagtcgcct 4080

tcccgttccg ctatcggctg aatttgattg cgagtgagat atttatgcca gccagccaga 4140

cgcagacgcg ccgagacaga acttaatggg cccgctaaca gcgcgatttg ctggtgaccc 4200

aatgcgacca gatgctccac gcccagtcgc gtaccgtctt catgggagaa aataatactg 4260

ttgatgggtg tctggtcaga gacatcaaga aataacgccg gaacattagt gcaggcagct 4320

tccacagcaa tggcatcctg gtcatccagc ggatagttaa tgatcagccc actgacgcgt 4380

tgcgcgagaa gattgtgcac cgccgcttta caggcttcga cgccgcttcg ttctaccatc 4440

gacaccacca cgctggcacc cagttgatcg gcgcgagatt taatcgccgc gacaatttgc 4500

gacggcgcgt gcagggccag actggaggtg gcaacgccaa tcagcaacga ctgtttgccc 4560

gccagttgtt gtgccacgcg gttgggaatg taattcagct ccgccatcgc cgcttccact 4620

ttttcccgcg ttttcgcaga aacgtggctg gcctggttca ccacgcggga aacggtctga 4680

taagagacac cggcatactc tgcgacatcg tataacgtta ctggtttcac attcaccacc 4740

ctgaattgac tctcttccgg gcgctatcat gccataccgc gaaaggtttt gcgccattcg 4800

atggtgtccg ggatctcgac gctctccctt atgcgactcc tgcattagga agcagcccag 4860

tagtaggttg aggccgttga gcaccgccgc cgcaaggaat ggtgcatgca aggagatggc 4920

gcccaacagt cccccggcca cggggcctgc caccataccc acgccgaaac aagcgctcat 4980

gagcccgaag tggcgagccc gatcttcccc atcggtgatg tcggcgatat aggcgccagc 5040

aaccgcacct gtggcgccgg tgatgccggc cacgatgcgt ccggcgtaga ggatcgagat 5100

cgatctcgat cccgcgaaat taatacgact cactataggg gaattgtgag cggataacaa 5160

ttcccctcta gaaataattt tgtttaactt taagaaggag atatacatat gaaacaaagc 5220

actattgcac tggcactctt accgttactg tttacccctg tgacaaaagc catgagcgat 5280

aaaattattc acctgactga cgacagtttt gacacggatg tactcaaagc ggacggggcg 5340

atcctcgtcg atttctgggc agagtggtgc ggtccgtgca aaatgatcgc cccgattctg 5400

gatgaaatcg ctgacgaata tcagggcaaa ctgaccgttg caaaactgaa catcgatcaa 5460

aaccctggca ctgcgccgaa atatggcatc cgtggtatcc cgactctgct gctgttcaaa 5520

aacggtgaag tggcggcaac caaagtgggt gcactgtcta aaggtcagtt gaaagagttc 5580

ctcgacgcta acctggccgg ttctggttct ggccatatgc accatcatca tcatcatgac 5640

gatgacgata agatgcccaa aaagaaacga aaggtgggta tccacggagt cccagcagcc 5700

gacaaaaaat atagcatcgg cctggacatc ggtaccaaca gcgttggctg ggcagtgatc 5760

actgatgaat acaaagttcc atccaaaaaa tttaaagtac tgggcaacac cgaccgtcac 5820

tctatcaaaa aaaacctgat tggtgctctg ctgtttgaca gcggcgaaac tgctgaggct 5880

acccgtctga aacgtacggc tcgccgtcgc tacactcgtc gtaaaaaccg catctgttat 5940

ctgcaggaaa ttttctctaa cgaaatggca aaagttgatg atagcttctt tcatcgtctg 6000

gaagagagct tcctggtgga agaagataaa aaacacgaac gtcacccgat tttcggtaac 6060

attgtggatg aggttgccta ccacgagaaa tatccgacca tctaccatct gcgtaaaaaa 6120

ctggttgata gcactgacaa agcggatctg cgtctgatct acctggctct ggcacacatg 6180

atcaaattcc gtggtcactt cctgatcgaa ggtgatctga accctgataa ctccgacgtg 6240

gacaaactgt tcattcagct ggttcagacc tataaccagc tgttcgaaga aaacccgatc 6300

aacgcgtccg gtgtagacgc taaggcaatt ctgtctgcgc gtctgtctaa gtctcgtcgt 6360

ctggaaaacc tgattgcgca actgccaggt gaaaagaaaa acggcctgtt cggcaatctg 6420

atcgccctgt ccctgggtct gactccgaac tttaaatcca actttgacct ggcggaagat 6480

gccaagctgc agctgagcaa agatacctat gacgatgacc tggataacct gctggcacag 6540

atcggtgatc agtatgccga tctgttcctg gccgcgaaaa acctgtctga tgcgattctg 6600

ctgtctgata tcctgcgcgt taacactgaa attactaaag cgccgctgag cgcatccatg 6660

attaaacgtt acgatgaaca ccaccaggat ctgaccctgc tgaaagcgct ggtgcgtcag 6720

cagctgccgg aaaaatacaa ggagatcttc ttcgaccaga gcaaaaacgg ttacgcgggc 6780

tacattgatg gtggtgcatc tcaggaggaa ttctacaaat tcattaaacc gatcctggaa 6840

aaaatggatg gtactgaaga gctgctggtt aaactgaatc gtgaagatct gctgcgcaaa 6900

cagcgtacct tcgataacgg ttccatcccg catcagattc atctgggcga actgcacgct 6960

atcctgcgcc gtcaggaaga cttttatccg ttcctgaaag acaaccgtga gaaaattgaa 7020

aaaatcctga ccttccgtat tccgtactat gtaggtccgc tggcgcgtgg taactcccgt 7080

ttcgcttgga tgacccgcaa aagcgaagaa accatcaccc cgtggaattt cgaagaagtc 7140

gttgacaaag gcgcgtccgc gcagtctttc atcgaacgca tgacgaactt cgacaaaaac 7200

ctgccgaacg agaaagtgct gccgaaacac tctctgctgt acgagtactt cactgtgtac 7260

aacgaactga ccaaagtgaa atacgtcacc gaaggtatgc gtaaaccggc attcctgtcc 7320

ggtgagcaaa aaaaagcaat cgtggatctg ctgttcaaaa ccaaccgtaa agtaaccgtg 7380

aaacagctga aggaagacta tttcaagaaa atcgaatgtt ttgattctgt tgaaatctcc 7440

ggcgtggaag atcgcttcaa tgcgtccctg ggtacgtatc acgacctgct gaaaattatc 7500

aaagacaaag attttctgga caacgaggaa aacgaagaca tcctggagga tattgtactg 7560

accctgaccc tgttcgaaga ccgtgagatg atcgaagaac gcctgaaaac ctacgcccac 7620

ctgttcgatg acaaggtaat gaagcagctg aaacgtcgtc gttataccgg ctggggtcgt 7680

ctgtcccgta aactgatcaa tggcatccgt gataaacagt ctggcaaaac catcctggac 7740

ttcctgaaat ccgacggttt cgcgaatcgt aacttcatgc aactgattca tgacgattct 7800

ctgactttca aagaagacat ccagaaagca caggtttccg gccagggtga ctctctgcac 7860

gagcacattg ccaatctggc tggttctccg gctattaaaa agggtattct gcagactgtg 7920

aaagtagttg atgagctggt caaagtaatg ggccgtcaca agccggaaaa cattgtgatc 7980

gaaatggcac gtgaaaacca gacgacccag aaaggtcaga aaaactctcg tgaacgcatg 8040

aaacgtatcg aagaaggcat caaagaactg ggctctcaga tcctgaagga acaccctgta 8100

gaaaataccc agctgcagaa cgaaaagctg tatctgtatt acctgcagaa cggccgcgat 8160

atgtatgtgg accaggaact ggatatcaac cgcctgtccg attacgatgt agatcacatc 8220

gtgccgcaaa gcttcctgaa agacgacagc attgacaaca aagtactgac ccgttctgat 8280

aagaaccgtg gcaaatccga taacgtcccg tctgaagaag ttgttaaaaa aatgaaaaac 8340

tattggcgtc agctgctgaa cgcgaaactg atcacccagc gtaagttcga caatctgact 8400

aaagctgagc gcggtggtct gtccgaactg gataaagcgg gttttatcaa acgccagctg 8460

gttgaaaccc gtcagatcac gaagcacgtt gcgcagattc tggactctcg tatgaacacc 8520

aaatacgacg aaaacgacaa actgatccgc gaggttaagg ttatcaccct gaaaagcaaa 8580

ctggtatccg attttcgtaa agactttcag ttctacaaag tgcgcgaaat taacaactat 8640

caccacgctc acgatgcata tctgaatgca gttgttggca cggcgctgat caaaaagtat 8700

ccgaaactgg aatctgaatt cgtatacggc gattacaaag tgtatgacgt tcgtaagatg 8760

atcgcaaaat ccgagcagga aattggtaag gcgacggcga aatacttctt ttattccaat 8820

attatgaact ttttcaaaac cgaaatcacc ctggcgaatg gtgaaattcg taaacgcccg 8880

ctgatcgaaa ccaacggtga aactggtgaa atcgtttggg acaaaggccg cgacttcgcg 8940

accgtgcgta aagttctgtc tatgccgcaa gtgaacatcg tcaagaagac cgaagtacaa 9000

accggcggtt ttagcaaaga gagcattctg ccaaaacgta actccgacaa actgatcgcg 9060

cgcaagaaag actgggatcc gaaaaaatac ggtggtttcg attctccaac cgttgcttat 9120

tccgttctgg tggtagccaa agttgagaaa ggtaaaagca aaaaactgaa atccgtaaag 9180

gaactgctgg gtattactat catggagcgt agctccttcg aaaaaaaccc gatcgatttt 9240

ctggaagcga aaggctataa agaagtcaaa aaggacctga tcatcaaact gccaaaatac 9300

agcctgttcg agctggaaaa cggccgtaaa cgtatgctgg catctgcggg cgaactgcag 9360

aaaggcaacg agctggctct gccgtccaaa tacgtgaact ttctgtacct ggcctctcac 9420

tacgaaaaac tgaaaggttc cccggaagac aacgaacaga aacagctgtt cgtagagcag 9480

cacaaacact acctggacga gatcatcgaa cagatttctg aattttctaa acgtgtgatt 9540

ctggctgatg cgaatctgga taaagttctg tctgcctata acaagcatcg tgacaaaccg 9600

atccgcgaac aggctgagaa catcatccac ctgttcactc tgactaacct gggcgcgcca 9660

gcggctttca agtactttga taccaccatt gaccgcaagc gttacacctc cactaaagaa 9720

gtgctggacg cgactctgat ccaccagtcc atcaccggtc tgtacgagac ccgtatcgat 9780

ctgagccagc tgggcggtga caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa 9840

aagaaaaagt gacaaagccc gaaaggaagc tgagttggct gctgccaccg ctgagcaata 9900

actagcataa ccccttgggg cctctaaacg ggtcttgagg ggttttttgc tgaaaggagg 9960

aactatatcc ggat 9974

<210> 2

<211> 1547

<212> PRT

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 2

Met Lys Gln Ser Thr Ile Ala Leu Ala Leu Leu Pro Leu Leu Phe Thr

1 5 10 15

Pro Val Thr Lys Ala Met Ser Asp Lys Ile Ile His Leu Thr Asp Asp

20 25 30

Ser Phe Asp Thr Asp Val Leu Lys Ala Asp Gly Ala Ile Leu Val Asp

35 40 45

Phe Trp Ala Glu Trp Cys Gly Pro Cys Lys Met Ile Ala Pro Ile Leu

50 55 60

Asp Glu Ile Ala Asp Glu Tyr Gln Gly Lys Leu Thr Val Ala Lys Leu

65 70 75 80

Asn Ile Asp Gln Asn Pro Gly Thr Ala Pro Lys Tyr Gly Ile Arg Gly

85 90 95

Ile Pro Thr Leu Leu Leu Phe Lys Asn Gly Glu Val Ala Ala Thr Lys

100 105 110

Val Gly Ala Leu Ser Lys Gly Gln Leu Lys Glu Phe Leu Asp Ala Asn

115 120 125

Leu Ala Gly Ser Gly Ser Gly His Met His His His His His His Asp

130 135 140

Asp Asp Asp Lys Met Pro Lys Lys Lys Arg Lys Val Gly Ile His Gly

145 150 155 160

Val Pro Ala Ala Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr

165 170 175

Asn Ser Val Gly Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser

180 185 190

Lys Lys Phe Lys Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys

195 200 205

Asn Leu Ile Gly Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala

210 215 220

Thr Arg Leu Lys Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn

225 230 235 240

Arg Ile Cys Tyr Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val

245 250 255

Asp Asp Ser Phe Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu

260 265 270

Asp Lys Lys His Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu

275 280 285

Val Ala Tyr His Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys

290 295 300

Leu Val Asp Ser Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala

305 310 315 320

Leu Ala His Met Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp

325 330 335

Leu Asn Pro Asp Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val

340 345 350

Gln Thr Tyr Asn Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly

355 360 365

Val Asp Ala Lys Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg

370 375 380

Leu Glu Asn Leu Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu

385 390 395 400

Phe Gly Asn Leu Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys

405 410 415

Ser Asn Phe Asp Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp

420 425 430

Thr Tyr Asp Asp Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln

435 440 445

Tyr Ala Asp Leu Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu

450 455 460

Leu Ser Asp Ile Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu

465 470 475 480

Ser Ala Ser Met Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr

485 490 495

Leu Leu Lys Ala Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu

500 505 510

Ile Phe Phe Asp Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly

515 520 525

Gly Ala Ser Gln Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu

530 535 540

Lys Met Asp Gly Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp

545 550 555 560

Leu Leu Arg Lys Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln

565 570 575

Ile His Leu Gly Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe

580 585 590

Tyr Pro Phe Leu Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr

595 600 605

Phe Arg Ile Pro Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg

610 615 620

Phe Ala Trp Met Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn

625 630 635 640

Phe Glu Glu Val Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu

645 650 655

Arg Met Thr Asn Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro

660 665 670

Lys His Ser Leu Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr

675 680 685

Lys Val Lys Tyr Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser

690 695 700

Gly Glu Gln Lys Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg

705 710 715 720

Lys Val Thr Val Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu

725 730 735

Cys Phe Asp Ser Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala

740 745 750

Ser Leu Gly Thr Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp

755 760 765

Phe Leu Asp Asn Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu

770 775 780

Thr Leu Thr Leu Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys

785 790 795 800

Thr Tyr Ala His Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg

805 810 815

Arg Arg Tyr Thr Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly

820 825 830

Ile Arg Asp Lys Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser

835 840 845

Asp Gly Phe Ala Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser

850 855 860

Leu Thr Phe Lys Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly

865 870 875 880

Asp Ser Leu His Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile

885 890 895

Lys Lys Gly Ile Leu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys

900 905 910

Val Met Gly Arg His Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg

915 920 925

Glu Asn Gln Thr Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met

930 935 940

Lys Arg Ile Glu Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys

945 950 955 960

Glu His Pro Val Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu

965 970 975

Tyr Tyr Leu Gln Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp

980 985 990

Ile Asn Arg Leu Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser

995 1000 1005

Phe Leu Lys Asp Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp

1010 1015 1020

Lys Asn Arg Gly Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys

1025 1030 1035 1040

Lys Met Lys Asn Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr

1045 1050 1055

Gln Arg Lys Phe Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser

1060 1065 1070

Glu Leu Asp Lys Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg

1075 1080 1085

Gln Ile Thr Lys His Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr

1090 1095 1100

Lys Tyr Asp Glu Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr

1105 1110 1115 1120

Leu Lys Ser Lys Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr

1125 1130 1135

Lys Val Arg Glu Ile Asn Asn Tyr His His Ala His Asp Ala Tyr Leu

1140 1145 1150

Asn Ala Val Val Gly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu Glu

1155 1160 1165

Ser Glu Phe Val Tyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys Met

1170 1175 1180

Ile Ala Lys Ser Glu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr Phe

1185 1190 1195 1200

Phe Tyr Ser Asn Ile Met Asn Phe Phe Lys Thr Glu Ile Thr Leu Ala

1205 1210 1215

Asn Gly Glu Ile Arg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu Thr

1220 1225 1230

Gly Glu Ile Val Trp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg Lys

1235 1240 1245

Val Leu Ser Met Pro Gln Val Asn Ile Val Lys Lys Thr Glu Val Gln

1250 1255 1260

Thr Gly Gly Phe Ser Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser Asp

1265 1270 1275 1280

Lys Leu Ile Ala Arg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly Gly

1285 1290 1295

Phe Asp Ser Pro Thr Val Ala Tyr Ser Val Leu Val Val Ala Lys Val

1300 1305 1310

Glu Lys Gly Lys Ser Lys Lys Leu Lys Ser Val Lys Glu Leu Leu Gly

1315 1320 1325

Ile Thr Ile Met Glu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp Phe

1330 1335 1340

Leu Glu Ala Lys Gly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile Lys

1345 1350 1355 1360

Leu Pro Lys Tyr Ser Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg Met

1365 1370 1375

Leu Ala Ser Ala Gly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu Pro

1380 1385 1390

Ser Lys Tyr Val Asn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys Leu

1395 1400 1405

Lys Gly Ser Pro Glu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu Gln

1410 1415 1420

His Lys His Tyr Leu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe Ser

1425 1430 1435 1440

Lys Arg Val Ile Leu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser Ala

1445 1450 1455

Tyr Asn Lys His Arg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile

1460 1465 1470

Ile His Leu Phe Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys

1475 1480 1485

Tyr Phe Asp Thr Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu

1490 1495 1500

Val Leu Asp Ala Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu

1505 1510 1515 1520

Thr Arg Ile Asp Leu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala Ala

1525 1530 1535

Thr Lys Lys Ala Gly Gln Ala Lys Lys Lys Lys

1540 1545

<210> 3

<211> 1399

<212> PRT

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 3

Met Pro Lys Lys Lys Arg Lys Val Gly Ile His Gly Val Pro Ala Ala

1 5 10 15

Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr Asn Ser Val Gly

20 25 30

Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser Lys Lys Phe Lys

35 40 45

Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys Asn Leu Ile Gly

50 55 60

Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala Thr Arg Leu Lys

65 70 75 80

Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn Arg Ile Cys Tyr

85 90 95

Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val Asp Asp Ser Phe

100 105 110

Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu Asp Lys Lys His

115 120 125

Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu Val Ala Tyr His

130 135 140

Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys Leu Val Asp Ser

145 150 155 160

Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala Leu Ala His Met

165 170 175

Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp Leu Asn Pro Asp

180 185 190

Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val Gln Thr Tyr Asn

195 200 205

Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly Val Asp Ala Lys

210 215 220

Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg Leu Glu Asn Leu

225 230 235 240

Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu Phe Gly Asn Leu

245 250 255

Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys Ser Asn Phe Asp

260 265 270

Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp Thr Tyr Asp Asp

275 280 285

Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln Tyr Ala Asp Leu

290 295 300

Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu Leu Ser Asp Ile

305 310 315 320

Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu Ser Ala Ser Met

325 330 335

Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr Leu Leu Lys Ala

340 345 350

Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu Ile Phe Phe Asp

355 360 365

Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly Gly Ala Ser Gln

370 375 380

Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu Lys Met Asp Gly

385 390 395 400

Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp Leu Leu Arg Lys

405 410 415

Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln Ile His Leu Gly

420 425 430

Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe Tyr Pro Phe Leu

435 440 445

Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr Phe Arg Ile Pro

450 455 460

Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg Phe Ala Trp Met

465 470 475 480

Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn Phe Glu Glu Val

485 490 495

Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu Arg Met Thr Asn

500 505 510

Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro Lys His Ser Leu

515 520 525

Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr Lys Val Lys Tyr

530 535 540

Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser Gly Glu Gln Lys

545 550 555 560

Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg Lys Val Thr Val

565 570 575

Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu Cys Phe Asp Ser

580 585 590

Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala Ser Leu Gly Thr

595 600 605

Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp Phe Leu Asp Asn

610 615 620

Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu Thr Leu Thr Leu

625 630 635 640

Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys Thr Tyr Ala His

645 650 655

Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg Arg Arg Tyr Thr

660 665 670

Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly Ile Arg Asp Lys

675 680 685

Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser Asp Gly Phe Ala

690 695 700

Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser Leu Thr Phe Lys

705 710 715 720

Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly Asp Ser Leu His

725 730 735

Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile Lys Lys Gly Ile

740 745 750

Leu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys Val Met Gly Arg

755 760 765

His Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg Glu Asn Gln Thr

770 775 780

Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met Lys Arg Ile Glu

785 790 795 800

Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys Glu His Pro Val

805 810 815

Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu Tyr Tyr Leu Gln

820 825 830

Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp Ile Asn Arg Leu

835 840 845

Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser Phe Leu Lys Asp

850 855 860

Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp Lys Asn Arg Gly

865 870 875 880

Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys Lys Met Lys Asn

885 890 895

Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr Gln Arg Lys Phe

900 905 910

Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser Glu Leu Asp Lys

915 920 925

Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg Gln Ile Thr Lys

930 935 940

His Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr Lys Tyr Asp Glu

945 950 955 960

Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr Leu Lys Ser Lys

965 970 975

Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr Lys Val Arg Glu

980 985 990

Ile Asn Asn Tyr His His Ala His Asp Ala Tyr Leu Asn Ala Val Val

995 1000 1005

Gly Thr Ala Leu Ile Lys Lys Tyr Pro Lys Leu Glu Ser Glu Phe Val

1010 1015 1020

Tyr Gly Asp Tyr Lys Val Tyr Asp Val Arg Lys Met Ile Ala Lys Ser

1025 1030 1035 1040

Glu Gln Glu Ile Gly Lys Ala Thr Ala Lys Tyr Phe Phe Tyr Ser Asn

1045 1050 1055

Ile Met Asn Phe Phe Lys Thr Glu Ile Thr Leu Ala Asn Gly Glu Ile

1060 1065 1070

Arg Lys Arg Pro Leu Ile Glu Thr Asn Gly Glu Thr Gly Glu Ile Val

1075 1080 1085

Trp Asp Lys Gly Arg Asp Phe Ala Thr Val Arg Lys Val Leu Ser Met

1090 1095 1100

Pro Gln Val Asn Ile Val Lys Lys Thr Glu Val Gln Thr Gly Gly Phe

1105 1110 1115 1120

Ser Lys Glu Ser Ile Leu Pro Lys Arg Asn Ser Asp Lys Leu Ile Ala

1125 1130 1135

Arg Lys Lys Asp Trp Asp Pro Lys Lys Tyr Gly Gly Phe Asp Ser Pro

1140 1145 1150

Thr Val Ala Tyr Ser Val Leu Val Val Ala Lys Val Glu Lys Gly Lys

1155 1160 1165

Ser Lys Lys Leu Lys Ser Val Lys Glu Leu Leu Gly Ile Thr Ile Met

1170 1175 1180

Glu Arg Ser Ser Phe Glu Lys Asn Pro Ile Asp Phe Leu Glu Ala Lys

1185 1190 1195 1200

Gly Tyr Lys Glu Val Lys Lys Asp Leu Ile Ile Lys Leu Pro Lys Tyr

1205 1210 1215

Ser Leu Phe Glu Leu Glu Asn Gly Arg Lys Arg Met Leu Ala Ser Ala

1220 1225 1230

Gly Glu Leu Gln Lys Gly Asn Glu Leu Ala Leu Pro Ser Lys Tyr Val

1235 1240 1245

Asn Phe Leu Tyr Leu Ala Ser His Tyr Glu Lys Leu Lys Gly Ser Pro

1250 1255 1260

Glu Asp Asn Glu Gln Lys Gln Leu Phe Val Glu Gln His Lys His Tyr

1265 1270 1275 1280

Leu Asp Glu Ile Ile Glu Gln Ile Ser Glu Phe Ser Lys Arg Val Ile

1285 1290 1295

Leu Ala Asp Ala Asn Leu Asp Lys Val Leu Ser Ala Tyr Asn Lys His

1300 1305 1310

Arg Asp Lys Pro Ile Arg Glu Gln Ala Glu Asn Ile Ile His Leu Phe

1315 1320 1325

Thr Leu Thr Asn Leu Gly Ala Pro Ala Ala Phe Lys Tyr Phe Asp Thr

1330 1335 1340

Thr Ile Asp Arg Lys Arg Tyr Thr Ser Thr Lys Glu Val Leu Asp Ala

1345 1350 1355 1360

Thr Leu Ile His Gln Ser Ile Thr Gly Leu Tyr Glu Thr Arg Ile Asp

1365 1370 1375

Leu Ser Gln Leu Gly Gly Asp Lys Arg Pro Ala Ala Thr Lys Lys Ala

1380 1385 1390

Gly Gln Ala Lys Lys Lys Lys

1395

<210> 4

<211> 225

<212> DNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 4

ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60

taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120

ataggagagc acagtcagcc tggcggtttt agagctagaa atagcaagtt aaaataaggc 180

tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225

<210> 5

<211> 225

<212> DNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 5

ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60

taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120

ataggcttcc agaattggat ctccggtttt agagctagaa atagcaagtt aaaataaggc 180

tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225

<210> 6

<211> 102

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 6

ggagagcaca gucagccugg cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60

uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102

<210> 7

<211> 102

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 7

ggcuuccaga auuggaucuc cgguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60

uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102

<210> 8

<211> 505

<212> PRT

<213> Sus scrofa

<400> 8

Met Asp Pro Gly Gln Gln Gln Pro Pro Pro Gln Pro Ala Pro Gln Gly

1 5 10 15

Gln Gly Gln Pro Pro Ala Gln Pro Pro Gln Gly Gln Gly Pro Pro Ser

20 25 30

Gly Pro Gly Gln Pro Ala Pro Pro Gly Ser Gln Ala Ala Thr Gln Xaa

35 40 45

Pro Pro Ala Gly His Gln Ile Val His Val Arg Gly Asp Ser Glu Thr

50 55 60

Asp Leu Glu Ala Leu Phe Asn Ala Val Met Asn Pro Lys Thr Ala Asn

65 70 75 80

Val Pro Gln Thr Val Pro Met Arg Leu Arg Lys Leu Pro Asp Ser Phe

85 90 95

Phe Lys Pro Pro Glu Pro Lys Ser His Ser Arg Gln Ala Ser Thr Asp

100 105 110

Ala Gly Thr Ala Gly Ala Leu Thr Pro Gln His Val Arg Ala His Ser

115 120 125

Ser Pro Ala Ser Leu Gln Leu Gly Ala Ile Ser Pro Gly Thr Leu Thr

130 135 140

Pro Thr Gly Val Val Ser Gly Pro Ala Ala Thr Pro Thr Ala Gln His

145 150 155 160

Leu Arg Gln Ser Ser Phe Glu Ile Pro Asp Asp Val Pro Leu Pro Ala

165 170 175

Gly Trp Glu Met Ala Lys Thr Ser Ser Gly Gln Arg Tyr Phe Leu Asn

180 185 190

His Ile Asp Gln Thr Thr Thr Trp Gln Asp Pro Arg Lys Ala Met Leu

195 200 205

Ser Gln Met Asn Val Thr Ala Pro Thr Ser Pro Pro Val Gln Gln Asn

210 215 220

Met Met Asn Ser Ala Ser Gly Pro Leu Pro Asp Gly Trp Glu Gln Ala

225 230 235 240

Met Thr Gln Asp Gly Glu Ile Tyr Tyr Ile Asn His Lys Asn Lys Thr

245 250 255

Thr Ser Trp Leu Asp Pro Arg Leu Asp Pro Arg Phe Ala Met Asn Gln

260 265 270

Arg Ile Ser Gln Ser Ala Pro Val Lys Gln Pro Pro Pro Leu Ala Pro

275 280 285

Gln Ser Pro Gln Gly Gly Val Met Gly Gly Gly Ser Ser Asn Gln Gln

290 295 300

Gln Gln Met Arg Leu Gln Gln Leu Gln Met Glu Lys Glu Arg Leu Arg

305 310 315 320

Leu Lys Gln Gln Glu Leu Leu Arg Gln Ala Met Arg Asn Ile Asn Pro

325 330 335

Ser Thr Ala Asn Ser Pro Lys Cys Gln Glu Leu Ala Leu Arg Ser Gln

340 345 350

Leu Pro Thr Leu Glu Gln Asp Gly Gly Thr Gln Asn Pro Val Ser Ser

355 360 365

Pro Gly Met Ser Gln Glu Leu Arg Thr Met Thr Thr Asn Ser Ser Asp

370 375 380

Pro Phe Leu Asn Ser Gly Thr Tyr His Ser Arg Asp Glu Ser Thr Asp

385 390 395 400

Ser Gly Leu Ser Met Ser Ser Tyr Ser Val Pro Arg Thr Pro Asp Asp

405 410 415

Phe Leu Asn Ser Val Asp Glu Met Asp Thr Gly Asp Thr Ile Asn Gln

420 425 430

Ser Thr Leu Pro Ser Gln Gln Asn Arg Phe Pro Asp Tyr Leu Glu Ala

435 440 445

Ile Pro Gly Thr Asn Val Asp Leu Gly Thr Leu Glu Gly Asp Gly Met

450 455 460

Asn Ile Glu Gly Glu Glu Leu Met Pro Ser Leu Gln Glu Ala Leu Ser

465 470 475 480

Ser Asp Ile Leu Asn Asp Met Glu Ser Val Leu Ala Ala Thr Lys Leu

485 490 495

Asp Lys Glu Ser Phe Leu Thr Trp Leu

500 505

<210> 9

<211> 951

<212> DNA

<213> Sus scrofa

<400> 9

acatatggat ggttttggat cttttgtatt cgttaaaagt tatgttaatt ttggtggttg 60

ctttattgat gacatttgtc cgtaatgggg gtaaaaaatg actaccatca tatgtttagg 120

gcttggcttg ggaaaaatat tacttaaaac ctagtttaaa gcgtagttat atcccttggg 180

ttttgtttat acccagaaca ttttagaatt tggaaaagca ctcatactgt cttggccttt 240

acataagcaa agtatccatc tgcaaatcta tatacctctt tgtcaaatac taaatgctga 300

aatttgtctt tggtatttag agtttcactg caaccaaata tctaaggaat ttaaagtgaa 360

aacaattttt aagaaatttt cattttaata ttcctaatag gccagtactg atgcaggcac 420

tgcaggggcc ctgactccac agcatgttcg agctcattcc tctccagctt ccctgcagct 480

gggagccata tctcctggga cactgacccc cactggagta gtctctggcc cagcagctac 540

gcccactgct caacaccttc gacagtcttc ttttgagata cctgatgatg tacctctgcc 600

agcgggctgg gagatggcca aaacatcttc tggtcagaga tacttcttaa agtaagtgaa 660

aataatgatg ggtgatggtt ttctgagggg aaaaaaaaaa aacctatttt ggaaaacata 720

ggtggtacca aaatataaaa tgtcatttgc ttttatattt tacttaatat ttacatcaaa 780

ctcagttatg tcttctgtaa cttttttttc agtttaataa gacctaaata ccttttttgg 840

ataatagttt aaaagcttta ttgatgcctc gttcatagcc ttttaataat cttttgtgcc 900

aactttggat atatgtttca aacctattaa ttaacttagc tcataaggaa a 951

<210> 10

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 10

gccagagacu acuccagugg guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 11

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 11

ugaugaugua ccucugccag guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 12

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 12

agauauggcu cccagcugca guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 13

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 13

ucucaaaaga agacugucga guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 14

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 14

agcugggagc cauaucuccu guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 15

<211> 100

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 15

cugucgaagg uguugagcag guuuuagagc uagaaauagc aaguuaaaau aaggcuaguc 60

cguuaucaac uugaaaaagu ggcaccgagu cggugcuuuu 100

<210> 16

<211> 225

<212> DNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 16

ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60

taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120

ataggtgatg atgtacctct gccaggtttt agagctagaa atagcaagtt aaaataaggc 180

tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225

<210> 17

<211> 225

<212> DNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 17

ggcttgtcgg actcttcgct attacgccag ctggcgaagg gggatgtgct gcaaggcgat 60

taagttgggt aacgccaggg ttttcccagt cacgacgtta ggaaattaat acgactcact 120

ataggagata tggctcccag ctgcagtttt agagctagaa atagcaagtt aaaataaggc 180

tagtccgtta tcaacttgaa aaagtggcac cgagtcggtg ctttt 225

<210> 18

<211> 102

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 18

ggugaugaug uaccucugcc agguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60

uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102

<210> 19

<211> 102

<212> RNA

<213> Artificial sequence (ARTIFICIAL SEQUENCE)

<400> 19

ggagauaugg cucccagcug caguuuuaga gcuagaaaua gcaaguuaaa auaaggcuag 60

uccguuauca acuugaaaaa guggcaccga gucggugcuu uu 102

Claims (4)

1. Application of YAP1-gRNA2, YAP1-gRNA3 and NCN proteins in preparation of a kit;

   the YAP1-gRNA2 is the sgRNA, the target sequence binding region of the YAP1-gRNA2 is shown as 3 rd to 22 nd nucleotides in SEQ ID NO. 18, the YAP1-gRNA3 is the sgRNA, the target sequence binding region of the YAP1-gRNA2 is shown as 3 rd to 22 nd nucleotides in SEQ ID NO. 19, and the NCN protein is shown as 3;

   The preparation method of the NCN protein comprises the following steps:

   (1) Introducing plasmid pKG-GE4 into escherichia coli BL21 (DE 3) to obtain recombinant bacteria;

   (2) Culturing the recombinant bacteria by adopting a liquid culture medium at 30 ℃, then adding IPTG and performing induction culture at 25 ℃, and then collecting thalli;

   (3) Crushing the collected thalli, and collecting a crude protein solution;

   (4) Purifying the His ₆ -tagged fusion protein from the crude protein solution using affinity chromatography;

   (5) Cutting fusion protein with His ₆ label by enterokinase with His ₆ label, and removing protein with His ₆ label by Ni-NTA resin to obtain purified NCN protein;

   The plasmid pKG-GE4 is shown as SEQ ID NO. 1;

   The kit is used for preparing recombinant cells, (b) preparing a cataract model pig and (c) preparing a cataract cell model or a cataract tissue model or a cataract organ model.
2. 2. A method for preparing a recombinant cell comprises the steps of co-transfecting YAP1-gRNA2, YAP1-gRNA3 and NCN protein into a pig cell to obtain the recombinant cell, wherein YAP1-gRNA2 is YAP1-gRNA2 as set forth in claim 1, YAP1-gRNA3 is YAP1-gRNA3 as set forth in claim 1, and NCN protein is NCN protein as set forth in claim 1.
3. 3. The method of claim 2, wherein the ratio of the YAP1-gRNA2, YAP1-gRNA3 and NCN protein is 10 ten thousand pig cells, 0.8-1.2 μg YAP1-gRNA2, 0.8-1.2 μg YAP1-gRNA3, 3-5 μg NCN protein.
4. 4. A kit comprising YAP1-gRNA2, YAP1-gRNA3 and NCN proteins;

   YAP1-gRNA2 is YAP1-gRNA2 described in claim 1, YAP1-gRNA3 is YAP1-gRNA3 described in claim 1, NCN protein is NCN protein described in claim 1;

   The kit is used for preparing recombinant cells, (b) preparing a cataract model pig and (c) preparing a cataract cell model or a cataract tissue model or a cataract organ model.