CA2182105C - Chloropyrimide intermediates - Google Patents
Chloropyrimide intermediates Download PDFInfo
- Publication number
- CA2182105C CA2182105C CA002182105A CA2182105A CA2182105C CA 2182105 C CA2182105 C CA 2182105C CA 002182105 A CA002182105 A CA 002182105A CA 2182105 A CA2182105 A CA 2182105A CA 2182105 C CA2182105 C CA 2182105C
- Authority
- CA
- Canada
- Prior art keywords
- formula
- compound
- amino
- preparation
- diamino
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
- 239000000543 intermediate Substances 0.000 title abstract description 40
- 238000000034 method Methods 0.000 claims abstract description 32
- 230000008569 process Effects 0.000 claims abstract description 29
- 238000002360 preparation method Methods 0.000 claims abstract description 17
- 238000006243 chemical reaction Methods 0.000 claims abstract description 14
- 150000001875 compounds Chemical class 0.000 claims description 95
- 230000007062 hydrolysis Effects 0.000 claims description 18
- 238000006460 hydrolysis reaction Methods 0.000 claims description 18
- 238000010992 reflux Methods 0.000 claims description 15
- ZXWGHENZKVQKPX-UHFFFAOYSA-N 4,6-dichloropyrimidine-2,5-diamine Chemical compound NC1=NC(Cl)=C(N)C(Cl)=N1 ZXWGHENZKVQKPX-UHFFFAOYSA-N 0.000 claims description 14
- HWSJQFCTYLBBOF-UHFFFAOYSA-N 2,5-diamino-4-hydroxy-1h-pyrimidin-6-one Chemical compound NC1=NC(O)=C(N)C(O)=N1 HWSJQFCTYLBBOF-UHFFFAOYSA-N 0.000 claims description 13
- 239000002904 solvent Substances 0.000 claims description 13
- 239000002253 acid Substances 0.000 claims description 9
- 150000001412 amines Chemical class 0.000 claims description 8
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 5
- 238000006798 ring closing metathesis reaction Methods 0.000 claims description 5
- HTJDQJBWANPRPF-UHFFFAOYSA-N Cyclopropylamine Chemical compound NC1CC1 HTJDQJBWANPRPF-UHFFFAOYSA-N 0.000 claims description 4
- 229910052739 hydrogen Inorganic materials 0.000 claims description 4
- MCGSCOLBFJQGHM-SCZZXKLOSA-N abacavir Chemical compound C=12N=CN([C@H]3C=C[C@@H](CO)C3)C2=NC(N)=NC=1NC1CC1 MCGSCOLBFJQGHM-SCZZXKLOSA-N 0.000 claims description 3
- 229910052736 halogen Chemical group 0.000 claims description 3
- 150000002367 halogens Chemical group 0.000 claims description 3
- 239000001257 hydrogen Substances 0.000 claims description 3
- 125000001624 naphthyl group Chemical group 0.000 claims description 3
- 125000005913 (C3-C6) cycloalkyl group Chemical group 0.000 claims description 2
- MSSXOMSJDRHRMC-UHFFFAOYSA-N 9H-purine-2,6-diamine Chemical class NC1=NC(N)=C2NC=NC2=N1 MSSXOMSJDRHRMC-UHFFFAOYSA-N 0.000 claims description 2
- 125000004209 (C1-C8) alkyl group Chemical group 0.000 claims 3
- 230000003301 hydrolyzing effect Effects 0.000 claims 2
- 125000004178 (C1-C4) alkyl group Chemical group 0.000 claims 1
- 125000006552 (C3-C8) cycloalkyl group Chemical group 0.000 claims 1
- 150000002431 hydrogen Chemical class 0.000 claims 1
- -1 9-substituted-2-aminopurin Chemical class 0.000 abstract description 18
- CZPWVGJYEJSRLH-UHFFFAOYSA-N Pyrimidine Chemical compound C1=CN=CN=C1 CZPWVGJYEJSRLH-UHFFFAOYSA-N 0.000 abstract description 6
- 150000003839 salts Chemical class 0.000 abstract description 6
- 238000013160 medical therapy Methods 0.000 abstract 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 51
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 30
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N Dimethyl sulfoxide Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 description 28
- 239000007787 solid Substances 0.000 description 27
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 26
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 24
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 22
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 21
- 230000015572 biosynthetic process Effects 0.000 description 20
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 18
- 238000003786 synthesis reaction Methods 0.000 description 18
- 239000000243 solution Substances 0.000 description 17
- 238000005160 1H NMR spectroscopy Methods 0.000 description 16
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 15
- NBIIXXVUZAFLBC-UHFFFAOYSA-N Phosphoric acid Chemical compound OP(O)(O)=O NBIIXXVUZAFLBC-UHFFFAOYSA-N 0.000 description 14
- 238000001819 mass spectrum Methods 0.000 description 13
- XHXFXVLFKHQFAL-UHFFFAOYSA-N phosphoryl trichloride Chemical compound ClP(Cl)(Cl)=O XHXFXVLFKHQFAL-UHFFFAOYSA-N 0.000 description 13
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 description 12
- ZHNUHDYFZUAESO-UHFFFAOYSA-N Formamide Chemical compound NC=O ZHNUHDYFZUAESO-UHFFFAOYSA-N 0.000 description 11
- 239000002244 precipitate Substances 0.000 description 11
- 238000005660 chlorination reaction Methods 0.000 description 10
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 9
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 9
- 235000019439 ethyl acetate Nutrition 0.000 description 9
- 229910052757 nitrogen Inorganic materials 0.000 description 9
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 9
- 239000000741 silica gel Substances 0.000 description 9
- 229910002027 silica gel Inorganic materials 0.000 description 9
- 125000000325 methylidene group Chemical group [H]C([H])=* 0.000 description 8
- 239000000843 powder Substances 0.000 description 8
- 239000003039 volatile agent Substances 0.000 description 8
- LRHPLDYGYMQRHN-UHFFFAOYSA-N N-Butanol Chemical compound CCCCO LRHPLDYGYMQRHN-UHFFFAOYSA-N 0.000 description 7
- 239000003153 chemical reaction reagent Substances 0.000 description 7
- 239000000203 mixture Substances 0.000 description 7
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 6
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 6
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 6
- DKGAVHZHDRPRBM-UHFFFAOYSA-N Tert-Butanol Chemical compound CC(C)(C)O DKGAVHZHDRPRBM-UHFFFAOYSA-N 0.000 description 6
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 6
- 229910000147 aluminium phosphate Inorganic materials 0.000 description 6
- WORJEOGGNQDSOE-UHFFFAOYSA-N chloroform;methanol Chemical compound OC.ClC(Cl)Cl WORJEOGGNQDSOE-UHFFFAOYSA-N 0.000 description 6
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 6
- 239000010410 layer Substances 0.000 description 6
- 239000012044 organic layer Substances 0.000 description 6
- RYYIULNRIVUMTQ-UHFFFAOYSA-N 6-chloroguanine Chemical class NC1=NC(Cl)=C2N=CNC2=N1 RYYIULNRIVUMTQ-UHFFFAOYSA-N 0.000 description 5
- 238000009833 condensation Methods 0.000 description 5
- 230000005494 condensation Effects 0.000 description 5
- 125000002147 dimethylamino group Chemical group [H]C([H])([H])N(*)C([H])([H])[H] 0.000 description 5
- UREBWPXBXRYXRJ-UHFFFAOYSA-N ethyl acetate;methanol Chemical compound OC.CCOC(C)=O UREBWPXBXRYXRJ-UHFFFAOYSA-N 0.000 description 5
- 239000000047 product Substances 0.000 description 5
- 150000005019 2-aminopurines Chemical class 0.000 description 4
- ROSDSFDQCJNGOL-UHFFFAOYSA-N Dimethylamine Chemical compound CNC ROSDSFDQCJNGOL-UHFFFAOYSA-N 0.000 description 4
- CDBYLPFSWZWCQE-UHFFFAOYSA-L Sodium Carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 description 4
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 4
- 239000011260 aqueous acid Substances 0.000 description 4
- 125000002837 carbocyclic group Chemical group 0.000 description 4
- 125000001309 chloro group Chemical group Cl* 0.000 description 4
- 238000006073 displacement reaction Methods 0.000 description 4
- 150000002148 esters Chemical class 0.000 description 4
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 4
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 4
- 238000002955 isolation Methods 0.000 description 4
- 239000002777 nucleoside Substances 0.000 description 4
- 239000008057 potassium phosphate buffer Substances 0.000 description 4
- 239000011541 reaction mixture Substances 0.000 description 4
- 238000001953 recrystallisation Methods 0.000 description 4
- 238000013341 scale-up Methods 0.000 description 4
- 150000003335 secondary amines Chemical class 0.000 description 4
- 229910052938 sodium sulfate Inorganic materials 0.000 description 4
- 235000011152 sodium sulphate Nutrition 0.000 description 4
- 238000004809 thin layer chromatography Methods 0.000 description 4
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 3
- QCQCHGYLTSGIGX-GHXANHINSA-N 4-[[(3ar,5ar,5br,7ar,9s,11ar,11br,13as)-5a,5b,8,8,11a-pentamethyl-3a-[(5-methylpyridine-3-carbonyl)amino]-2-oxo-1-propan-2-yl-4,5,6,7,7a,9,10,11,11b,12,13,13a-dodecahydro-3h-cyclopenta[a]chrysen-9-yl]oxy]-2,2-dimethyl-4-oxobutanoic acid Chemical compound N([C@@]12CC[C@@]3(C)[C@]4(C)CC[C@H]5C(C)(C)[C@@H](OC(=O)CC(C)(C)C(O)=O)CC[C@]5(C)[C@H]4CC[C@@H]3C1=C(C(C2)=O)C(C)C)C(=O)C1=CN=CC(C)=C1 QCQCHGYLTSGIGX-GHXANHINSA-N 0.000 description 3
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 3
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 3
- PNKUSGQVOMIXLU-UHFFFAOYSA-N Formamidine Chemical group NC=N PNKUSGQVOMIXLU-UHFFFAOYSA-N 0.000 description 3
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 3
- 125000000217 alkyl group Chemical group 0.000 description 3
- 229910021529 ammonia Inorganic materials 0.000 description 3
- 239000000908 ammonium hydroxide Substances 0.000 description 3
- 125000003118 aryl group Chemical group 0.000 description 3
- 230000008901 benefit Effects 0.000 description 3
- 125000004432 carbon atom Chemical group C* 0.000 description 3
- QQVDYSUDFZZPSU-UHFFFAOYSA-M chloromethylidene(dimethyl)azanium;chloride Chemical compound [Cl-].C[N+](C)=CCl QQVDYSUDFZZPSU-UHFFFAOYSA-M 0.000 description 3
- 239000013078 crystal Substances 0.000 description 3
- 238000002425 crystallisation Methods 0.000 description 3
- 230000008025 crystallization Effects 0.000 description 3
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 3
- 238000000354 decomposition reaction Methods 0.000 description 3
- 239000012530 fluid Substances 0.000 description 3
- 125000000623 heterocyclic group Chemical group 0.000 description 3
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 3
- KTKOGYHDCBXJIS-UHFFFAOYSA-N n'-[4,6-dichloro-2-(dimethylaminomethylideneamino)pyrimidin-5-yl]-n,n-dimethylmethanimidamide Chemical compound CN(C)C=NC1=NC(Cl)=C(N=CN(C)C)C(Cl)=N1 KTKOGYHDCBXJIS-UHFFFAOYSA-N 0.000 description 3
- 229940127073 nucleoside analogue Drugs 0.000 description 3
- UHZYTMXLRWXGPK-UHFFFAOYSA-N phosphorus pentachloride Chemical compound ClP(Cl)(Cl)(Cl)Cl UHZYTMXLRWXGPK-UHFFFAOYSA-N 0.000 description 3
- 125000006239 protecting group Chemical group 0.000 description 3
- 238000000746 purification Methods 0.000 description 3
- 150000003212 purines Chemical class 0.000 description 3
- 150000003230 pyrimidines Chemical class 0.000 description 3
- 230000035484 reaction time Effects 0.000 description 3
- 239000008259 solid foam Substances 0.000 description 3
- 239000007858 starting material Substances 0.000 description 3
- GKASDNZWUGIAMG-UHFFFAOYSA-N triethyl orthoformate Chemical compound CCOC(OCC)OCC GKASDNZWUGIAMG-UHFFFAOYSA-N 0.000 description 3
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 2
- AVXURJPOCDRRFD-UHFFFAOYSA-N Hydroxylamine Chemical compound ON AVXURJPOCDRRFD-UHFFFAOYSA-N 0.000 description 2
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 2
- BZLVMXJERCGZMT-UHFFFAOYSA-N Methyl tert-butyl ether Chemical compound COC(C)(C)C BZLVMXJERCGZMT-UHFFFAOYSA-N 0.000 description 2
- 125000002015 acyclic group Chemical group 0.000 description 2
- 125000004453 alkoxycarbonyl group Chemical group 0.000 description 2
- 150000001408 amides Chemical class 0.000 description 2
- 125000003277 amino group Chemical group 0.000 description 2
- 239000007864 aqueous solution Substances 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 230000008878 coupling Effects 0.000 description 2
- 238000010168 coupling process Methods 0.000 description 2
- 238000005859 coupling reaction Methods 0.000 description 2
- 230000000694 effects Effects 0.000 description 2
- 238000000921 elemental analysis Methods 0.000 description 2
- IDGUHHHQCWSQLU-UHFFFAOYSA-N ethanol;hydrate Chemical compound O.CCO IDGUHHHQCWSQLU-UHFFFAOYSA-N 0.000 description 2
- 238000001704 evaporation Methods 0.000 description 2
- 230000008020 evaporation Effects 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 238000000605 extraction Methods 0.000 description 2
- 229960004396 famciclovir Drugs 0.000 description 2
- GGXKWVWZWMLJEH-UHFFFAOYSA-N famcyclovir Chemical compound N1=C(N)N=C2N(CCC(COC(=O)C)COC(C)=O)C=NC2=C1 GGXKWVWZWMLJEH-UHFFFAOYSA-N 0.000 description 2
- 150000004820 halides Chemical class 0.000 description 2
- 125000001183 hydrocarbyl group Chemical group 0.000 description 2
- 229910052500 inorganic mineral Inorganic materials 0.000 description 2
- BDAGIHXWWSANSR-UHFFFAOYSA-N methanoic acid Natural products OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 2
- 239000011707 mineral Substances 0.000 description 2
- 235000010755 mineral Nutrition 0.000 description 2
- 230000004048 modification Effects 0.000 description 2
- 238000012986 modification Methods 0.000 description 2
- XYWHZUCZNRMJGO-UHFFFAOYSA-N n-(2-amino-4,6-dichloropyrimidin-5-yl)formamide Chemical compound NC1=NC(Cl)=C(NC=O)C(Cl)=N1 XYWHZUCZNRMJGO-UHFFFAOYSA-N 0.000 description 2
- 229910000489 osmium tetroxide Inorganic materials 0.000 description 2
- 239000012285 osmium tetroxide Substances 0.000 description 2
- CTSLXHKWHWQRSH-UHFFFAOYSA-N oxalyl chloride Chemical compound ClC(=O)C(Cl)=O CTSLXHKWHWQRSH-UHFFFAOYSA-N 0.000 description 2
- 239000008363 phosphate buffer Substances 0.000 description 2
- BDERNNFJNOPAEC-UHFFFAOYSA-N propan-1-ol Chemical compound CCCO BDERNNFJNOPAEC-UHFFFAOYSA-N 0.000 description 2
- VTGOHKSTWXHQJK-UHFFFAOYSA-N pyrimidin-2-ol Chemical class OC1=NC=CC=N1 VTGOHKSTWXHQJK-UHFFFAOYSA-N 0.000 description 2
- CSNFMBGHUOSBFU-UHFFFAOYSA-N pyrimidine-2,4,5-triamine Chemical compound NC1=NC=C(N)C(N)=N1 CSNFMBGHUOSBFU-UHFFFAOYSA-N 0.000 description 2
- 125000000714 pyrimidinyl group Chemical group 0.000 description 2
- 230000009467 reduction Effects 0.000 description 2
- 239000002002 slurry Substances 0.000 description 2
- 229910000029 sodium carbonate Inorganic materials 0.000 description 2
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 2
- 238000011282 treatment Methods 0.000 description 2
- PYOKUURKVVELLB-UHFFFAOYSA-N trimethyl orthoformate Chemical compound COC(OC)OC PYOKUURKVVELLB-UHFFFAOYSA-N 0.000 description 2
- PALXIVSOYWILAW-WWILAJSPSA-N (1s,2s,4r)-4-(2-amino-6-chloropurin-9-yl)-1-(hydroxymethyl)cyclopentane-1,2-diol Chemical compound C12=NC(N)=NC(Cl)=C2N=CN1[C@@H]1C[C@H](O)[C@@](O)(CO)C1 PALXIVSOYWILAW-WWILAJSPSA-N 0.000 description 1
- OKAKIXAOZUSTFY-UHFFFAOYSA-N (3-aminocyclopent-3-en-1-yl)methanol Chemical compound NC1=CCC(CO)C1 OKAKIXAOZUSTFY-UHFFFAOYSA-N 0.000 description 1
- IHLRGGLJGGTPCY-HWKANZROSA-N (e)-hept-5-en-3-one Chemical compound CCC(=O)C\C=C\C IHLRGGLJGGTPCY-HWKANZROSA-N 0.000 description 1
- MWBWWFOAEOYUST-UHFFFAOYSA-N 2-aminopurine Chemical compound NC1=NC=C2N=CNC2=N1 MWBWWFOAEOYUST-UHFFFAOYSA-N 0.000 description 1
- UNCQVRBWJWWJBF-UHFFFAOYSA-N 2-chloropyrimidine Chemical group ClC1=NC=CC=N1 UNCQVRBWJWWJBF-UHFFFAOYSA-N 0.000 description 1
- VJCQEPWQSBKWTE-UHFFFAOYSA-N 2h-triazolo[4,5-d]pyrimidin-5-amine Chemical class N1=C(N)N=CC2=NNN=C21 VJCQEPWQSBKWTE-UHFFFAOYSA-N 0.000 description 1
- OSWFIVFLDKOXQC-UHFFFAOYSA-N 4-(3-methoxyphenyl)aniline Chemical compound COC1=CC=CC(C=2C=CC(N)=CC=2)=C1 OSWFIVFLDKOXQC-UHFFFAOYSA-N 0.000 description 1
- CSDQQAQKBAQLLE-UHFFFAOYSA-N 4-(4-chlorophenyl)-4,5,6,7-tetrahydrothieno[3,2-c]pyridine Chemical compound C1=CC(Cl)=CC=C1C1C(C=CS2)=C2CCN1 CSDQQAQKBAQLLE-UHFFFAOYSA-N 0.000 description 1
- NLXLAEXVIDQMFP-UHFFFAOYSA-N Ammonia chloride Chemical compound [NH4+].[Cl-] NLXLAEXVIDQMFP-UHFFFAOYSA-N 0.000 description 1
- BVKZGUZCCUSVTD-UHFFFAOYSA-M Bicarbonate Chemical compound OC([O-])=O BVKZGUZCCUSVTD-UHFFFAOYSA-M 0.000 description 1
- COVZYZSDYWQREU-UHFFFAOYSA-N Busulfan Chemical compound CS(=O)(=O)OCCCCOS(C)(=O)=O COVZYZSDYWQREU-UHFFFAOYSA-N 0.000 description 1
- 101100294106 Caenorhabditis elegans nhr-3 gene Proteins 0.000 description 1
- WSFSSNUMVMOOMR-UHFFFAOYSA-N Formaldehyde Chemical compound O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 description 1
- UYTPUPDQBNUYGX-UHFFFAOYSA-N Guanine Natural products O=C1NC(N)=NC2=C1N=CN2 UYTPUPDQBNUYGX-UHFFFAOYSA-N 0.000 description 1
- 241000700721 Hepatitis B virus Species 0.000 description 1
- 241000725303 Human immunodeficiency virus Species 0.000 description 1
- LFTLOKWAGJYHHR-UHFFFAOYSA-N N-methylmorpholine N-oxide Chemical compound CN1(=O)CCOCC1 LFTLOKWAGJYHHR-UHFFFAOYSA-N 0.000 description 1
- 238000005481 NMR spectroscopy Methods 0.000 description 1
- JNTOCHDNEULJHD-UHFFFAOYSA-N Penciclovir Chemical compound N1C(N)=NC(=O)C2=C1N(CCC(CO)CO)C=N2 JNTOCHDNEULJHD-UHFFFAOYSA-N 0.000 description 1
- YGYAWVDWMABLBF-UHFFFAOYSA-N Phosgene Chemical compound ClC(Cl)=O YGYAWVDWMABLBF-UHFFFAOYSA-N 0.000 description 1
- ZLMJMSJWJFRBEC-UHFFFAOYSA-N Potassium Chemical compound [K] ZLMJMSJWJFRBEC-UHFFFAOYSA-N 0.000 description 1
- UIIMBOGNXHQVGW-DEQYMQKBSA-M Sodium bicarbonate-14C Chemical compound [Na+].O[14C]([O-])=O UIIMBOGNXHQVGW-DEQYMQKBSA-M 0.000 description 1
- 208000036142 Viral infection Diseases 0.000 description 1
- HCHKCACWOHOZIP-UHFFFAOYSA-N Zinc Chemical compound [Zn] HCHKCACWOHOZIP-UHFFFAOYSA-N 0.000 description 1
- IHEDZPMXLKYPSA-RQJHMYQMSA-N [(1s,4r)-4-(2-amino-6-chloropurin-9-yl)cyclopent-2-en-1-yl]methanol Chemical compound C12=NC(N)=NC(Cl)=C2N=CN1[C@@H]1C[C@H](CO)C=C1 IHEDZPMXLKYPSA-RQJHMYQMSA-N 0.000 description 1
- UXKZFJDNFBNQHE-RITPCOANSA-N [(1s,4r)-4-aminocyclopent-2-en-1-yl]methanol Chemical compound N[C@@H]1C[C@H](CO)C=C1 UXKZFJDNFBNQHE-RITPCOANSA-N 0.000 description 1
- ZUKDYRVCKVBDHW-SSDOTTSWSA-N [(4r)-4-(2-amino-6-chloropurin-9-yl)cyclopenten-1-yl]methanol Chemical compound C12=NC(N)=NC(Cl)=C2N=CN1[C@@H]1CC=C(CO)C1 ZUKDYRVCKVBDHW-SSDOTTSWSA-N 0.000 description 1
- LODIITARAXYLIV-ZCFIWIBFSA-N [(4r)-4-aminocyclopenten-1-yl]methanol Chemical compound N[C@@H]1CC=C(CO)C1 LODIITARAXYLIV-ZCFIWIBFSA-N 0.000 description 1
- 125000003545 alkoxy group Chemical group 0.000 description 1
- 150000001348 alkyl chlorides Chemical class 0.000 description 1
- 235000019270 ammonium chloride Nutrition 0.000 description 1
- 150000008064 anhydrides Chemical class 0.000 description 1
- 230000003602 anti-herpes Effects 0.000 description 1
- 230000000840 anti-viral effect Effects 0.000 description 1
- 125000000852 azido group Chemical group *N=[N+]=[N-] 0.000 description 1
- 239000000872 buffer Substances 0.000 description 1
- 239000006227 byproduct Substances 0.000 description 1
- 230000015556 catabolic process Effects 0.000 description 1
- 239000003610 charcoal Substances 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 238000011097 chromatography purification Methods 0.000 description 1
- 239000007859 condensation product Substances 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 239000006184 cosolvent Substances 0.000 description 1
- 125000004122 cyclic group Chemical group 0.000 description 1
- 125000000753 cycloalkyl group Chemical group 0.000 description 1
- UYDJAHJCGZTTHB-UHFFFAOYSA-N cyclopentane-1,1-diol Chemical compound OC1(O)CCCC1 UYDJAHJCGZTTHB-UHFFFAOYSA-N 0.000 description 1
- LPIQUOYDBNQMRZ-UHFFFAOYSA-N cyclopentene Chemical compound C1CC=CC1 LPIQUOYDBNQMRZ-UHFFFAOYSA-N 0.000 description 1
- 238000006731 degradation reaction Methods 0.000 description 1
- 238000010511 deprotection reaction Methods 0.000 description 1
- 238000010586 diagram Methods 0.000 description 1
- 125000000664 diazo group Chemical group [N-]=[N+]=[*] 0.000 description 1
- 238000004090 dissolution Methods 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 238000010828 elution Methods 0.000 description 1
- 230000032050 esterification Effects 0.000 description 1
- 238000005886 esterification reaction Methods 0.000 description 1
- LJQKCYFTNDAAPC-UHFFFAOYSA-N ethanol;ethyl acetate Chemical compound CCO.CCOC(C)=O LJQKCYFTNDAAPC-UHFFFAOYSA-N 0.000 description 1
- 238000001914 filtration Methods 0.000 description 1
- 150000003948 formamides Chemical class 0.000 description 1
- 235000019253 formic acid Nutrition 0.000 description 1
- 239000007789 gas Substances 0.000 description 1
- 239000008187 granular material Substances 0.000 description 1
- 150000008282 halocarbons Chemical class 0.000 description 1
- 125000005842 heteroatom Chemical group 0.000 description 1
- 238000007327 hydrogenolysis reaction Methods 0.000 description 1
- FUKUFMFMCZIRNT-UHFFFAOYSA-N hydron;methanol;chloride Chemical compound Cl.OC FUKUFMFMCZIRNT-UHFFFAOYSA-N 0.000 description 1
- 125000002883 imidazolyl group Chemical group 0.000 description 1
- 230000006872 improvement Effects 0.000 description 1
- 238000011065 in-situ storage Methods 0.000 description 1
- 238000010348 incorporation Methods 0.000 description 1
- 239000012442 inert solvent Substances 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 239000002808 molecular sieve Substances 0.000 description 1
- FLSVUQSDOOPGNL-UHFFFAOYSA-N n'-(2-amino-4,6-dichloropyrimidin-5-yl)-n,n-dimethylmethanimidamide Chemical compound CN(C)C=NC1=C(Cl)N=C(N)N=C1Cl FLSVUQSDOOPGNL-UHFFFAOYSA-N 0.000 description 1
- RGVJJXOLJPTHNO-UHFFFAOYSA-N n-(2,4-diamino-6-chloropyrimidin-5-yl)formamide Chemical compound NC1=NC(N)=C(NC=O)C(Cl)=N1 RGVJJXOLJPTHNO-UHFFFAOYSA-N 0.000 description 1
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 description 1
- 125000003835 nucleoside group Chemical group 0.000 description 1
- 239000003960 organic solvent Substances 0.000 description 1
- 229910052760 oxygen Inorganic materials 0.000 description 1
- 229960001179 penciclovir Drugs 0.000 description 1
- 125000005499 phosphonyl group Chemical group 0.000 description 1
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Substances [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 description 1
- 229910000027 potassium carbonate Inorganic materials 0.000 description 1
- 230000003389 potentiating effect Effects 0.000 description 1
- 238000001556 precipitation Methods 0.000 description 1
- 150000003141 primary amines Chemical class 0.000 description 1
- 230000002035 prolonged effect Effects 0.000 description 1
- 238000011321 prophylaxis Methods 0.000 description 1
- UYLWKSJTHLRFBX-UHFFFAOYSA-N purin-6-one Chemical compound O=C1N=CN=C2N=CN=C12 UYLWKSJTHLRFBX-UHFFFAOYSA-N 0.000 description 1
- YAAWASYJIRZXSZ-UHFFFAOYSA-N pyrimidine-2,4-diamine Chemical compound NC1=CC=NC(N)=N1 YAAWASYJIRZXSZ-UHFFFAOYSA-N 0.000 description 1
- 125000001453 quaternary ammonium group Chemical group 0.000 description 1
- 230000009257 reactivity Effects 0.000 description 1
- 230000011514 reflex Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 229920006395 saturated elastomer Polymers 0.000 description 1
- URGAHOPLAPQHLN-UHFFFAOYSA-N sodium aluminosilicate Chemical compound [Na+].[Al+3].[O-][Si]([O-])=O.[O-][Si]([O-])=O URGAHOPLAPQHLN-UHFFFAOYSA-N 0.000 description 1
- 238000001228 spectrum Methods 0.000 description 1
- 239000012258 stirred mixture Substances 0.000 description 1
- 125000001424 substituent group Chemical group 0.000 description 1
- 229910052717 sulfur Inorganic materials 0.000 description 1
- 125000004434 sulfur atom Chemical group 0.000 description 1
- 238000010408 sweeping Methods 0.000 description 1
- 239000011269 tar Substances 0.000 description 1
- 125000005270 trialkylamine group Chemical group 0.000 description 1
- 230000009385 viral infection Effects 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- 239000011701 zinc Substances 0.000 description 1
- 229910052725 zinc Inorganic materials 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D239/00—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings
- C07D239/02—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings
- C07D239/24—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members
- C07D239/28—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, directly attached to ring carbon atoms
- C07D239/46—Two or more oxygen, sulphur or nitrogen atoms
- C07D239/48—Two nitrogen atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D239/00—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings
- C07D239/02—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings
- C07D239/24—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members
- C07D239/28—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, directly attached to ring carbon atoms
- C07D239/46—Two or more oxygen, sulphur or nitrogen atoms
- C07D239/50—Three nitrogen atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D473/00—Heterocyclic compounds containing purine ring systems
- C07D473/40—Heterocyclic compounds containing purine ring systems with halogen atoms or perhalogeno-alkyl radicals directly attached in position 2 or 6
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Nitrogen Condensed Heterocyclic Rings (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Abstract
The present invention relates to certain novel pyrimidine intermediates of formulae I, II and III indicated hereinafter and their salts, processes for their preparation and processes for their conversion to 9-substituted-2-aminopurin es which are useful in medical therapy: (see figure I, II, III)
Description
w0 95/21161 ~' 8 210 5 pCT~GB95/00225 Chloronvrimidine Intermediates The present invention relates to certain novel pyrimidine intermediates, processes for their preparation and their conversion to 9-substituted-2-aminopurines, such as certain carbocyclic, heterocyclic and acyclic purine nucleoside analogues, and salts, esters and pharmaceutically acceptable derivatives thereof.
A number of 2-aminopurine nucleoside analogues have been shown to be useful in the treatment or prophylaxis of viral infections, for example the compound of formula (A) N~ ' N / N CA) HO
is described as having potent activity against human immunodeficiency virus (HIS and hepatitis B virus (IdB~ (EP 0434450).
Processes have been proposed for the preparation of 9-substituted-2-aminopurines, generally starting from a pyrimidine compound, coupling with a sugar analogue residue, and cyclisation to form the imidazole ring and introduction of any suitable 6-substituent.
Pyrimidine compounds which have been identified as being usefi~l in the preparation of 9-substituted-2-aminopurines include 2,5-diamino-4,6-dichloropyrimidine, N,N-(4,6-dichloro-2,5-pyrimidinediyl)bis formamide and also N-2-acylated pyrimidine derivatives such as the 2-acetamido and 2-isobutryamide derivatives (US Patent 5087697).
Processes for the synthesis of these intermediates generally involve a number of steps of which some are difficult to perfoirn and produce poor yields, preventing any practical scale up of these processes above a few grams, and are thus di~cult and uneconomical.
,~ , s . y _2_ Processes For the synthesis of the intermediate 2,S-diamino-4,6-dichloropyrimidine include the direct chlorination of readily available 2,5-diamino-4,6-dihydroxypyrimidine using phosphorus oxychloride. The original examination of this reaction was carried out by Temple et aI. (J. Org. Chem. 1975, 40: 3141-3142). These workers concluded that the reaction was unsuccessful, apparently because of degradation of the pyrimidine sing system. Hanson (SmithKline Beecham, WO 91/01310, US Patent 5216161) subsequently described a process for the direct chlorination of 2,5-diamino-4,6-dihydroxypyrimidine by reffuxing with phosphorus oxychloride in the presence of large molar excesses of quaternary ammonium chlorides or amine hydrochlorides. We have examined this process and have obtained, repeatedly, much lower yields (<10%) of crude 2,5-diamino-4,6-dichloropyrimidine than those specified in the SmithKline Beecham patent specification.
The extensive decomposition of the 2,5-diamino-4,6-dihydroxypyrimidine to tars which coat the equipment, combined with the problems of dealing with the copious solids due to the insoluble amine salts, constitute significant drawbacks and make scale-up of such a process impractical. The modifications of Legraverend et al. (Synthesis 1990:
587-589), namely using acetonitrile as a solvent and adding phosphorus pentachloride to the phosphorous oxychloride and quaternary ammonium chloride, result, in our experience in the isolation of approximately 30% (after chromatographic purification) of 2,5-diamino-4,6-dichloropyrimidine on a 2-5 gram scale. Again, scale-up beyond a few grams is impractical due to the formation of tarry precipitates.
A recent Lonza AG patent specification (EP 0 552 758) suggests that higher yields (35-65%) may be obtained with phosphorus oxychloride chlorination when the 5-amino group of 2,5-diamino-4,6-dihydroxypyrimidine is protected with an alkoxycarbonyl protecting group. This modification is claimed to simplify the chlorination step in that the amines and phosphorus pentachloride, employed in the prior processes discussed above are not required. This creates a new problem, namely the need to remove the alkoxycarbonyl protecting groups in order to be able to convert the pyrimidine intermediates to purines.
Indeed, the Lonza AG specification does not show that such 5-protected 2,5-diamino-4,6-dichloropyrimidines may be converted to purines in an advantageous manner.
WO 95/21161 218 210 5 pCT~GB95100225 A process for the synthesis of N,N~-(4,6-dichloro-2,5-pyrimidinediyl)bis formamide is the reaction of 2,5-diamino-4,6-dichloropyrimidine with formic acid and acetic anhydride ' (Harnden et al., J. Med. Chem. 1990, 33:187-196 and US Patent 5,159,076).
' The 5-step route to the N-2-acylated derivatives, and also to 2,5-diamino-4,6-dichloropyrimidine required for the synthesis of N,N-(4,6-dichloro-2,5-pyrimidinediyl)bis-formamide (Temple et al., J. Org. Chem. 1975, 40: 3141-3142), starts from 2-amino-6-chloropyiimidin-4-one and contains steps, which include the introduction of the 5-nitro group and the subsequent handling and reduction of very reactive S-nitro-4,6-dichloropyrimidine intermediates, which make scale-up impractical. The yields on a number of the steps to these intermediates are poor (Legraverend et al., Synthesis 1990:
~ 87-589).
We have now discovered certain new pyrimidine intermediates which are useful in a new synthetic route for the preparation of the above 9-substituted-2-aminopurines and in addition which can be used in the synthesis of the known intermediates described above.
In one aspect of this invention we provide the following novel intermediates which may be utilised in the synthesis of 2-aminopurines, namely compounds of formulae (I), (1T) and ci N / N CHN C ~ N / R2 (II) R1 (I) ~N C1 ~NHC N N Cl H2 N / HCHO
(III) r H N~N C1 w0 95121161 y ' .-, .
wherein R1 and R2, which be the same or different, are selected from C1_g straight-chain alkyl, C1_g branched alkyl, C3_g cycloalkyl, and aryl groups (such as phenyl or naphthyl), which may be optionally substituted, for example by C 1 ~ alkyl or halogen (e.g. Cl). In a preferred embodiment of the invention Rl and R2 are both methyl.
These novel intermediates can be readily prepared in good yields and are useful for the preparation of a wide variety of different types of 2-aminopurines including the nucleoside analogue of formula (A), famciclovir (EP 0182024), penciclovir (EP 0141927), I-i2G
(EP 0343133), (1'S,3'S,4'S)-2-amino-1,9-dihydro-9-[3,4-dihydroxy-3-hydroxymethyl-1-cyclopentyl)-6H-purin-6-one (EP 0420518), and other 9-substituted-2-aminopurines provided that the 9-substituent is not attached by a glycosidic bond.
In a further aspect of this invention we provide processes for the synthesis of the novel intermediates of formulae (>7, ()I) and (III], and the known intermediate 2,5-diamino-4,6-dichloropyrimidine(I~. These processes are illustrated in the simplified diagram below which is designed for illustration only of the possible ways of synthesising these intermediates;
2,5-diamino-4,6-dihydroxypyrimidine.
m 1 s. ~ )l.
WO 95/21161 . ~ 2 1 0 ~ PCT/GB95100225 '- -5-The present invention also provides a process for the preparation of compounds of fornmla (I) which comprises chlorination of 2,5-diamino-4,6-dihydroxypyrimidine with a ' halomethylenimminium salt (V'~lsmeier reagent) of formula (~.
R1 + _ >N CHC1 C1 (v~
wherein R1 and R2 are as defined above Compounds of formula ('~, may be prepared from a variety of formamides of secondary amines by reaction with a variety of acid halides, such as phosphorus oxychloride, phosphorus pentachloride, thionyl chloride, phosgene, and oxalyl chloride, for example as detailed in a review by C. M. Marson, Tetrahedron 1992, 48: 3660-3720 and references therein.
The advantage of protecting the diaminopyrimidine from extensive decomposition during chlorination is achieved by the in situ protection of the amino groups with two molar equivalents of Vilsmeier reagent (~ to give a bis-formamidine intermediate (detected by thin-layer chromatography), which is subsequently chlorinated to a compound of formula (I~ as the reaction with additional equivalents of V'ilsmeier reagent proceeds. The improved solubility of such bis-formamidine derivatives is an added advantage of this process, facilitating the subsequent chlorination to compounds of formula (I) and their isolation and simple purification.
The disadvantage of the use of 5-alkoxycarbonyl protecting groups, as described in the Lonza specification (EP 0552758) is avoided since the formamidine groups in compounds of formula (1~ are readily hydrolysed under mild conditions in a step-wise manner to form the intermediates (II) and (III); or alternatively compounds of formula (I) can be directly hydrolysed to compounds of formula (III).
The compound 2,5-diamino-4,6-dichloropyrimidine (I~ can be prepared by:-WO 95/21161 ~ v ~1 218 210 5 PCT/GB95100225 A) the hydrolysis of a compound of formula (I);
B) the hydrolysis of a compound of formula (II); or ' C) the hydrolysis of a compound of formula (11T). ' The hydrolysis of (1], (In, or (II>7 to 2,5-diamino-4,6-dichloropyrimidine is conveniently carried out at pH 3 +/- 0. S by adding a water-miscible cosolvent, such as ethanol. The hydrolysis is more ei$cient at pH 1-2, with shorter reaction times required than at a higher pH. It is advisable at pH I-2, however, to protect 2,5-diamino-4,6-dichloropyrimidine from hydrolysis to hydroxypyrimidines by extraction, as it is formed, into an organic layer which is not miscible with the aqueous acid. When the pH of the aqueous layer is below 1, extraction of the product into the organic layer is ine~cient (the pKa of (I~ was found to be ca. 0.5 and the pyrimidine ring is thus significantly protonated below pH 1).
Preferably, the acid used for this hydrolysis should be one which is not appreciably soluble in the organic layer, e.g. phosphoric or sulfuric acid. The organic solvent should be one which is stable to aqueous acid and in which (I~ is soluble. Satisfactory solvents for the organic layer include toluene and halocarbon solvents such as methylene chloride, chloroform, and 1,2-dichloroethane. At completion, the organic layer is simply washed, e.g. with saturated aqueous bicarbonate, dried and concentrated to provide (I~
with no purification required.
Compounds of formula (111) can be prepared by:-A) selective hydrolysis of a compound of formula (I); or B) selective hydrolysis of a compound of formula (11).
The hydrolysis of compounds of formula (I) or (1T) to (III) is most efficiently carried out in dilute aqueous acid, preferably in dilute aqueous mineral acid such as sulfuric acid, hydrochloric acid, or phosphoric acid. Prolonged exposure to pH below 1 should be avoided as the chloropyrimidine ring is protonated significantly below pH 1 and may pCT~GB95/00225 _7_ therefore undergo attack by water, generating undesired hydroxypyrimidine by-products.
Preferably, the pH is maintained above 2 and optimally at 3 +/- 0.5 for the e$cient ' formation of (III). In this optimal pH range, the formamidine groups of (I) and (11) are selectively hydrolysed to give (11T) in approximately 70% yield. As the hydrolysis of the ' formamidine groups of (17 and (11) proceed, the secondary amine from which the V'~lsmeier reagent (~ was formed (HNR1R2) is liberated and causes the pH of the solution to rise, thus slowing the hydrolyses. In addition, with certain reactive aliphatic amines HNR1R2, such as N,N-dimethylamine, it is necessary to maintain a pH sui~ciently low to prevent the chloro groups of the pyrimidine ring from displacement by the secondary amine.
We have found that maintaining the pH of the reaction mixtures below 4 avoids significant displacement of the chloro groups by the secondary amine, even with amines as reactive as N,N-dimethylamine. It was thus found optimal to buffer the hydrolyses of (17 and (11) to (11T) at pH 3 +/_ 0.5 or to add increments of acid throughout the hydrolyses in order to maintain the pH in this range.
Optimally, the hydrolysis of compounds of formula (I) or (1T) to (III) is carzied out in a minimum of water with the pH controlled as described above. Under these conditions, (III) precipitates as formed and is simply filtered off and washed with water.
The hydrolysis is carried out at gentle reffux for 4 hours, or at lower temperatures for longer periods of time.
The compounds of formula (1TJ can be prepared by the selective hydrolysis of the compounds of formula (I~. Preferably the selective hydrolysis is carried out with slightly more than two molar equivalents of mineral acid in water or ethanol and warmed for 15-30 minutes.
The compounds of formula ()] can be prepared by reacting 2,5-diamino-4,6-dihydroxypyrimidine with a V'~lsmeier reagent of formula (~.
The compound 2,5-diamino-4,6-dihydroxypyrimidine is commercially available (Sigma, ' Maybridge BTB, Pfaltz and Bauer, Polyorganix).
WO 95121161 ~ * '~ ~ ~ ~ ~ PCT~GB95/00225 -8_ -The novel bis-formamidines of formula (I) are formed and isolated conveniently in high yield when the 2,S-diamino-4,6-dihydroxypytZmidine (or a salt thereof, such as the hydrochloride or the hemisulfate) is treated with at least 4 molar equivalents of a Vilsmeier reagent (V). These chloiination reactions proceed under extremely mild conditions without the formation of copious tarry precipitates which characterises direct chlorinations, as previously described with phosphorus oxychloride and phosphorus oxychloride / quaternary ammonium halides. The V'ilsmeier chlorination of 2,5-diamino-4,6-dihydroxypyrimidine may be carried out in an inert solvent, such as toluene, chloroallcenes, or chloroalkanes (such as methylene chloride, chloroform or 1,2-dichloroethane). Preferably the solvent is 1,2-dichloroethane, chloroform, or methylene chloride. The chlorination may be carried out at 0 to 110°C, preferably at 40-100°C, conveniently at reflux for the solvent used. Reaction times are typically 12 to 48 hours.
Isolation of compounds of formula (I~ is simple and can be readily scaled-up, involving simply washing the reaction solution with an aqueous solution containing sufficient base, such as sodium bicarbonate, to neutralize any hydrogen chloride formed and then concentrating the dried organic layer to obtain the novel chlorinated pyrimidines of formula (I). The compounds of formula (I) are generally stable and may be precipitated from a variety of solvents, such as ethyl acetate, and stored or used without further purification.
Particularly preferred examples of the compounds of formulae (I), (1T) and (III) are:
a) 4,6-Dichloro-2,5-bis-[(dimethylamino)methyleneamino]pyrimidine b) 2-Amino-4,6-dichloro-S_[(dimethylamino)methyleneamino]pyiimidine c) N-(2-Amino-4,6-dichloro-S-pyrimidinyl)formamide According to a further aspect of this invention the novel intermediate of formula (111) can be used in the synthesis of 2-amino-6-chloropurines. In addition compounds of formula (I) or (1T) may also be used in the synthesis of 2-amino-6-chloropurine nucleosides, provided that the amine HNR1R2 (where Rl and R2 are defined earlier) liberated, during the conversion of the pyrimidine intermediate to the purine, is su~ciently unreactive towards the displacement of the chloro group of the 2-amino-6-chloropurines generated. , :. G" _ ; r .-WO 95/21161 ' ' ~ ~ ~ ~ PCT/GB95I00225 _9_ The compounds of formula (II17 share with the previously described N-2-acylated ' derivatives the property of greater reactivity than 2,5-diamino-4,6-dichloropyrimidine toward displacement of a chloro group by an appropriate primary amine or protected ' hydroxylamine. However, such condensations with (II>] (described in more detail below) may be carried out under milder conditions at lower temperatures and with shorter reaction times than with compound (I~, thus resulting in less decomposition of the amines. The condensation products (Vn are isolated in greater yield and purity than the corresponding products (V~ formed in condensations with 2,5-diamino-4,6-dichloropyrimidine (I~. Another advantage of the use of the intermediate (III
over the previously described N-2-acylated derivatives, in addition to greater ease of synthesis, is that the purines generated from (~ do not require deprotection, i. e.
hydrolysis of the N-2-acyl group (these longer processes are described in US Patents 5,087,697 and 5,159, 076).
CI CI
NHCHO HCI ~N From CH(~ NO ~ VIII N
H N N NHR 3 H N ~ ~N ~ ~ ~N
z N I HZN N I
Ma) - M~ (vua) - (vnt) pxd) From Vlla (Famddovir) From Vla ~-NH z ~-NH s EtOH
n-BuOH
NH
N
Z '>
H ZN N N
. i Wherein R3 is hereinafter defined. (Ixa) WO 95/21161 " I~ . ~, ~ ' ~ ~, PCT/GB95/00225 The compound of formula (III) can be used to prepare the novel intermediates of formula (VI) which represent a further feature of the invention:-NHCxo N
(VI) wherein R3 may be hydrogen or any group which is not attached by a glycosidic bond.
Preferably R3 is a hydroxyl or a protected hydroxyl; or a carbocyclic group (e.g. C3_~
carbocyclic), an acyclic group (e.g. C2_g hydrocarbyl) wherein carbon atoms may be substituted by one or more heteroatoms such as N, O or S, or a heterocyclic group (e.g.
C4_~ heterocyclic) in which at least one carbon atom is replaced by a N, 0, or S atom, or a substituted analogue of any thereof (e.g. such substituents are independently selected from C 1 ~allcyl, C 1 ~ alkoxy, hydroxyl or protected hydroxyl, azido, phosphonyl, or halogen), provided that such groups are not attached by a glycosidic bond .
Preferred groups for R3 are hydroxyl or protected hydroxyl.
Further preferred groups for R3 are HO
a.
b. H;
HO
HO
C.
c~
i r! n.
w0 95/21161 ° ' ' 218 210 5 PCT~GB95100225 d. (AcOCH2)2CHCH2CH2- ;
e. HOCH2CH2~HCH2' ;
HZOH
HO
f.
HO
HO
g~ ; and HO
H 0 ~~~~~ ' ., h. H°\
A further preferred group for R3 is ;
HO
Suitable groups for R3 are selected from a; b; c; d; e; and ~ as defined above.
By "hydrocarbyl" it is meant a group containing only hydrogen and carbon atoms, which may contain double and/or triple bonds and which may be straight, branched, cyclic or aromatic.
W095/21161 '~ ,, ~ t~ , ' _ 12_ According to a further feature of the invention we provide a process for the preparation of compounds of formula (Vn which comprises reacting a compound of formula (1TT) with an amine of formula R3NH2, where R3 is defined above. Such condensations are preferably carried out at reflux in a solvent such as ethanol, butanol, water or acetonitrile in the presence of at least one equivalent of a base, such as trialkylamine or potassium or sodium carbonate.
Subsequent references to compounds of formula (VIa, b, c, d, e, ~ g, or h) denote a compound of formula (V>] in which R3 is a group of a, b, c, d, e, i; g, or h as defined above.
A particularly preferred compound of formula(V~ is ( 1 S,4R)-4-[(2-amino-6-chloro-S-formamido-4-pyrimidinyl)amino]-2-cyclopentene-1-methanol (VIa) The novel intermediates (V)7 can be converted by ring closure to the corresponding compounds of formula (VIn:-c~
(VII) N / N
wherein R3 is defined above.
Ring closure of (Vn to (VIn is conveniently carried out in trialkylorthoformates (e.g.
triethylorthoformate or trimethylorthoformate) with concentrated aqueous acid (e.g. 2-4 molar equivalents of hydrochloric, sulfuric acid or methane sulfonic). For example, the hydrochloride salt of (Vaa) i.e. wherein R3 represents group a, begins to precipitate from such orthoformate solutions of (VIa) within minutes and yields above 90% may be achieved by filtration of the precipitate, optimally after several hours at ambient temperature.
. ~ .j . . . ~-w0 95/21161 " ~ ' ' 218 210 5 p~'/GB95/00225 r-- - 13 -The synthesis of 9-substituted-2-amino-6-chloropurines, such as compounds of formula (VIn, in this manner represents a significant improvement over previously published syntheses utilizing triaminopyrimidine intermediates such as (VIIl7:
ci N / ~2 ~N~N 3 (VIII) as described US Patent 4,916,224. The previously-described routes to intermediates such as (V~ are longer and, more importantly, the number of steps to the purine targets after incorporation of the group R3 is greater. Also, triaminopyrimidine intermediates such as (VIII are air- and light-sensitive and extremely difficult to purify due to their polarity and metal-chelating abilities (the isolation from the zinc reduction of diazo intermediates is especially problematic). The novel 5-formamido intermediates of formula (Vn are easily and directly attainable from compounds of formula (IIn in one step and are generally solids which are stable and easily-purified by precipitation from a suitable solvent.
(1'S,3'S,4'S)-2-Amino-1,9-dihydro-9-[3,4-dihydroxy-3-hydroxymethyl-1-cyclopentyl]-6H-purin-6-one (IXtI) (EP0420,518) may be prepared by condensation of the compound of formula(II~ with 4-amino-3-cyclopentene-1-methanol (US patent 5,049,671) to form the compound of formula (VIg) followed by ring closure of the compound of formula (VIg) to prepare the compound of formula (VBg), which may be hydroxylated, with osmium tetroxide/N-methyl-morpholine N-oxide to provide the compound of formula (V>Zh). The compound of formula (VIEa) is hydrolysed to form the compound of formula (IXh).
WO 95/21161 ' ~ ~~ PCT/GB95/00225 2-Amino-6-chloropurine (VIIb) may be prepared by ring closure of novel 2,4-diamino-6-chloro-5-formamidopyrimidine (VIb), conveniently synthesized by condensation of the compound of formula (III) with ammonia. The compound of formula (VIIb) is an intermediate suitable for the synthesis of acyclic antiviral nucleosides, such as famciclovir wherein the 2-amino-6-chloropurine intermediate (Vtld) is conveniently subjected to hydrogenolysis to the 2-aminopurine nucleoside.
Carbocyclic nucleosides may also be synthesized from the compound of formula (Vlib), for example by (Pd-catalyzed coupling with an appropriate carbocyclic intermediate as described in Mac Keith et al., J.Chem.Soc.Perkin Trans 1. 1993: 313-314 and references therein.
The compounds of formula (VITa), (Vllc), (VITe), (VIIf), (Vltg) and (VIEa) are conveniently hydrolyzed to the corresponding guanine compound by reffuxing with aqueous base or acid.
As a further feature of this invention we have found an alternative process for the synthesis of 2,6-diaminopurines (wherein the 6-amino group is substituted by R4 and R5, which may be the same or different, and are selected from H, C 1 _galkyl, C3-6cycloalkyl, aryl (such as phenyl), in particular R4 is H and RS is cyclopropyl) directly from (VI) which advantageously eliminates a step in the process. Such 2-aminopurine compounds can be synthesised directly from the intermediates (VI) by refluxing the compound of formula (VI) with an excess of the amine (HNR4R5) in a reiluxing solvent, such as ethanol, isopropanol, n-propanol, t-butanol or n-butanol.
In particular cases, it may be more useful to utilize 2,5-diamino-4,6-dichloropyrimidine(I~ to prepare compounds of formula (VIII), useful in the synthesis of 8-modified 2-aminopurine nucleoside analogues, such as 8-aza-2-aminopurines (which have broad-spectrum anti-herpes activities described in Storer et al., Spec.
Publ. Roy. Soc.
Chem (Rec. Adv. Chem. Anti-Infect. Agents) 1993, 119: 251-265); in such cases the intermediates (1), (II) and (111) can be used to provide (I~.
Zoa2io5 w0 95/21161 ~ P . t , ' PCT/GB95/00225 Pharmaceutically acceptable esters of certain compounds of the invention may be prepared by esterification using conventional methods known in the art. Such methods include , for " example, the use of an appropriate acid halide or anhydride.
The compounds of the invention, including esters thereof, may be converted into pharmaceutically acceptable salts in a conventional manner by treatment with an appropriate acid or base. An ester or salt of a compound of the invention may be converted into the parent compound, for example, .by hydrolysis.
The following examples are intended for illustration only and are not intended to limit the scope of the invention in any way.
Example 1 4.6-Dichloro-2.5-bis-1 f ~dimethylamino)methylene)amino }pyrimidine 2,5-Diamino-4,6-dihydroxypyrimidine hemisulfate (Sigma, 25.0 g, 0.131 mole) was stirred in chloroform (AR Mallinckrodt, 400 mL) in a 2 L- 3-necked round bottom flask equipped with a reflux condenser (with source of nitrogen connected to the top of the condenser) and an exit for HCl gas connecting another neck of the flask to a NaOH trap.
(Chloromethylene)dimethyl ammonium chloride (V'~lsmeier reagent, Aldrich, 88.0 g, 0.651 mole as 95%) was washed into the flask with additional chloroform (400 mL).
The reaction mixture was brought cautiously to reflux with nitrogen sweeping the HCl evolved into the trap. When the evolution of HCl slowed after about 1 hour of reflux, the sweep was stopped and the reaction kept under a gentle positive pressure of nitrogen from that point. Additional V'~lsmeier reagent (50.0 g, 0.370 mole) was added after 24 hours and reflux continued for an additional 20 hours. The stirred reaction mixture (yellow solution with dark yellow solid) was cooled (ice bath) and diluted with water (sufficient to dissolve the solid, ca. 300 mL). The aqueous layer was adjusted to pH 7 with sodium hydroxide or solid sodium carbonate. The chloroform layer was separated, washed with water (3 x 400 mL), dried (sodium sulfate), and concentrated in vacuo to a dark yellow solid (36 g). This solid was dissolved in ethyl acetate (300 mL), stirred with charcoal (1 g), and filtered with a silica gel pad (3x3 in., packed in ethyl acetate). The pad was WO95121161 .~' "~
washed with additional ethyl acetate and eluents concentrated in vacuo to leave the title compound as a light tan solid (30.75 g, 81% ); m.p. 116-119°C; 1H-NMR
identical to that of recrystallized samples.
Anal. Calcd. for C1pH14N6CI2Ø10 EtOAc: C, 41.92; H, 5.01; N, 28.20; Cl, 23.80.
Found: C, 42.23; H, 4.95; N, 28.46; CI, 24.11.
Recrystallization of such a sample from ethyl acetate gave the title compound as white granules; m.p. 123-125 °C; mass spectrum (CI/CH4): 291, 289 (M+1); 1H-NMR
(DMSO-d6) 8: 8.49 and 8.69 (both s, 1 each, 2CH), 3.16 (s, 3, CH3), 3.03 (s, 6, 2CH3), 2.97 (s, 3, CH3); W (pH 7 phosphate buffer) ~,max 296 nM (E33,300), ,min 248 (5200).
Anal. Calcd. for C10H14N6CI2: C, 41.54; H, 4.88; N, 29.06; Cl, 24.52. Found:
C, 41.59;
H, 4.91; N, 29.01; CI, 24.47.
Example 2 2-Amino-4.6-dichloro-5-~ [tdimethylamino)methylene~] amino ~pyimidine 4,6-Dichloro-2,5-bis-{[(dimethylamino)methylene)amino}pyrimidine (Example 1, 5.87g, 20.3 mmol) was dissolved in 95% ethanol (200 mL) and 6 N aqueous hydrochloric acid (13.5 mL) added. The solution was heated in an oil bath at 55 °C under nitrogen for 30 minutes, at which point TLC (silica gel, 5% methanol-chloroform) showed that starting material had been cleanly converted to a lower-Rf product. The cooled (ice bath) solution was adjusted to pH ~8 with concentrated ammonium hydroxide and the resulting mixture (white precipitate formed) concentrated on a rotary evaporator to ~5 mL to remove ethanol. Additional water (20 mL) was added and the cooled mixture was filtered. The white precipitate was washed with additional water (2 x 20 mL) and dried to give the title compound as a white powder (4.50 g, 95%), m.p. >dec 250 °C ; mass spectrum (CI/CH4): 236, 234 (M+1); 1H-NMR (DMSO-d6)8: 7.59 (s, 1, CH), 6.90 (s, 2, NH2), 3.00 and 2.94 (both s, 3 each, 2CH3); LTV (pH 7 phosphate buffer) ~.max: 328 nM (s 4500), 255 (15,800).
w0 95/21161 '' "' ~ '~
Anal. Calcd. for C7H9NSC12: C, 35.92; H, 3.88: N, 29.92; CI, 30.29. Found: C, 35.66; H, 3.86; N, 29.74; Cl, 30.54.
In another experiment, 2,5-diamino-4,6-dihydroxypyrimidine hemisulfate (Sigma, 48.0 g, 0.250 mole) was reacted as in Example 1 with less V'~lsmeier reagent (7.2 molar equivalents) and the resulting 4,6-dichloro-2,S-bis-{[(dimethylamino)methylene]amino}
pyrimidine (92%), without recrystallization, was hydrolyzed in 95% ethanol (1 L) and 6 N
aqueous hydrochloric acid (110 mL) to provide the title compound of the same purity (elemental analysis and 1H-NMR) as the characterized sample described above (44.2 g.
76% overall from 2,5-diamino-4,6-dihydroxypyrimidine hemisulfate).
Example 3 N-(2-Amino-4.6-dichloro-S-pyiimidinyl)formamide lIIl7 A slurry of 2-amino-4,6-dichloro-5-{[(dimethylamino)methylene]amino}pyrimidine (Example 2, I.50 g, 6.41 mmol) and 1.5 M aqueous potassium phosphate buffer (35 mL, prepared by adjusting the pH of a 1.5 M solution of KHZP04 to 3.2 by addition of 85%
phosphoric acid) was gently refluxed (in an oil bath at 125 °C). After 4 hours of reflux, the pH of the mixture was adjusted from 4 to 3 by addition of 4 drops of 85%
phosphoric acid. After a total of 6 hours of reffux, TLC(silica gel plaxes developed in 5% methanol-chloroform) showed that the starting material had been largely converted to a lower-Rf product. The solid was filtered and washed with water (5 mL), methanol (5 mL), and dried to give the title compound as a white solid (0.900 g, 68%), m.p.
>250°C dec.; mass spectrum (CI/CH4): 209, 207 (M+I); 1H-NMR (DMSO-d6)8: 9.81 and 9.46 (s and d, J =
11 Hz, total 1, NH), 8.25 and 8.00 (s and d, J = 11 Hz, total 1, CHO), 7.69 and 7.63 (both s, total 2, NH2).
Anal. Calcd for CSH4N40C12: C, 29.01; H, 1.95; N, 27.07; Cl, 34.25. Found: C, 29.12;
H, 1.96; N, 27.13; Cl, 34.34.
WO95121161 ~ , : ~". ' a ,' 21821 O5 _; PCT/GB95l00225 - 18 - _.
In another experiment, a slurry of 2-amino-4,6-dichloro-S-{[(dimethyl-amino)methylene]amino}-pyrimidine (Example 2, 25.0 g, 0.107 mol) in 1.5 M
aqueous potassium phosphate buffer (300 mL, prepared as above) was gently refluxed for 4 hours.
pH was maintained at 3.2 by addition of 85% phosphoric acid, as required, throughout this period. The precipitate was filtered, washed with water (3 x 10 mL), methanol (2 x mL), and dried (50°C, 25 mm Hg) to give the title compound as an off white powder (16.0 g, 72%) with purity identical to that of the characterized sample described above (elemental analysis and 1H-NMR).
EXamDle 4 2.5-Diamino-4.6-dichloropyrimidine fIVI
4,6-Dichloro-2,5-bis-{[(dimethylamino)methylene]amino}pyrimidine (Example l, 1.00 g, 3.36 mmol) in ethanol (25 mL) and pH 3.2 aqueous potassium phosphate buffer (1.5 M, 10 mL, prepared as described in Example 3) was refluxed for 24 hours. During reflux, the pH was maintained at ca. 3 by addition of 85% phosphoric acid, as required.
The ethanol was evaporated in vacuo and waer added (10 mL). This solution was extracted with chloroform (3 x 25 mL). The comnined chloroform layers were dried (sodium sulfate) and chloroform evaporated to leave a solid (0.40 g). Crystallization of this solid from ethanol-water/ 4:1 gave the title compound (I~ as off white needles (0.324 g, 52%);
darkens and shrinks to black solid above 185°C, does not become fluid below 300°C ; .[Lit. 198°C
(Legraverend et al., Synthesis 1990:587-589) and 188-191°C (Temple et al., J. Org.
Chem. 1975, 40:3141-3142)]; mass spectrum (CI/CH4): 181, 179 (M+1); 1H-NMR
(DMSO-d6)8: 6.50 (br s, 2, NH2), 4.73 (br s, 2, NH2).
Anal. Calcd. for C4H4N4C12Ø12 EtOH: C, 27.60; H, 2.58; N, 30.36; Cl, 38.42.
Found:
C, 27.99; H, 2.39; N, 30.42; Cl, 38.74.
WO 95/21161 ' ~ ' ' ~ 18 210 5 p~'/GB95/00225 Example 5 2.5-Dia.mino-4.6-dichloropvrimidine (IVl A mixture of 2-amino-4,6-dichloro-5-[(dimethylamino)methyleneJamino}pyrimidine (Example 2, 500 mg, 2.14 mmol), pH 3.2 aqueous potassium phosphate buffer (1.5 M, 6 mL, prepared as described in Example 3), water (1 mL), and ethanol (5 mL) was refluxed gently for 28 hours. During the reflux period, pH was maintained at ca. 3 by addition of 85% phosphoric acid. Volatiles were evaporated in vacuo and the residual solids partitioned between water (30 mL, adjusted to ph 8 with dilute ammonium hydroxide) and chloroform (75 mL). The chloroform layer was dried (sodium sulfate) and the chloroform evaporated to leave off white solid (0.30 g). Crystallization of this solid from ethanol:water/ 4:1 gave the title compound (IV) as light pink needles (332 mg, 61%);
darkens and shrinks to black solid above 185°C, does not become fluid below 300°C;
1H-NMR (DMSO-d6) and mass spectra, identical to those described in Example 4.
Anal. Calcd. for C4H4N4C12: C, 26.83; I~ 2.25; N, 31.30; Cl, 39.61. Found: C, 26.93;
H, 2.25; N, 31.24; Cl, 39.52.
Example 6 2.5-Diamino-4.6-dichloropnimidine (T~
N-(2-Amino-4,6-dichloro-5-pyrimidinyl)formamide (Example 3, 500 mg, 2.42 mmol) was dissolved in 0.1 N hydrochioric acid (5 mL, 2.5 mequiv) and ethanol (7 mL) at reflux.
The solution was refluxed for 5 hours. Volatiles were removed in vacuo. The residue was partitioned between water (30 mL) adjusted to pH 8 with dilute ammonium hydroxide and ethyl acetate (75 mL). The ethyl acetate layer was dried (sodium sulfate).
Evaporation of the ethyl acetate left pink solid (0.40 g). Recrystallization of the solid from 95% ethanol gave the title compound (IV) as light pink needles (280 mg, 65%); darkens and shrinks to black solid above 185°C, does not become fluid below 300°C ; 1H-NMR (DMSO-d6) and mass spectra identical to those described in Example 4.
-A
WO 95/21161 . ' ' ~ ~ ~ PCTIGB95/00225 -20- ~-Anal. Calcd. for C4H4N4C12: C.26.83; H.2.25; N.31.30; C1.39.61. Found C.26.95;
H.2.24; N. 31.19; Cl. 39.53.
Example 7 ( 1 S.4R)-4-f (2-Amino-6-chloro-5-formamido-4-pvrimidinyl)amino] 2 cvclopentene 1 methanol (VIa~
N-(2-Amino-4,6-dichloro-5-pyiimidinyl)formamide (Example 3, 2.07 g, 10.0 mmol) was stirred in refluxing absolute ethanol (40 mL) under nitrogen to achieve partial dissolution.
To this stirred mixture was added a solution of freshly prepared (1S,4R)-4-amino-2-cyclopentene-1-methanol (PCT Application 9204015.3, 1.57 g, 12.5 mmol as 90%) in ethanol ( 15 mL) followed by triethylamine (3 .5 mL, 25 mmol, freshly distilled from calcium hydride). After 14 hours of reflux, the resulting dark solution was cooled and 1 N
sodium hydroxide ( 10 mL) was added. The volatiles were evaporated in vacuo.
The residual tan solid foam was dissolved in 5% methanol-ethyl acectate, and the solution was washed through a silica gel pad to give the title compound as an off white solid (2.50 g, 88%), after evaporation of solvents. Recrystallization of the solid from ethyl acetate-methanol (20:1) gave the title compound (VIa) as fine white crystals (2.29 g, 81%), m.p.
177-178°C; mass spectrum (CI/CH4): 286, 284 (M+1), 190, 188 (B+I~; 1H-NMR
(DMSO-d6)8: 8.99 and 8.58 (s and d, J = 11.1 Hz, total 1, amide NH), 8.11 and 7.80 (s and d, J = 11.1 Hz, total 1, amide CH), 6.77 and 6.61 (two d, J = 8.0 Hz) overlapping 6.60 and 6.48 (two br s, total 3, NH and NH2), 5.85 and 5.70 (two m, 1 each, CH=CH), 5.15-5.00 (m, 1, NCH), 4.71 (t, J = 5.1, 1, OH), 3.45-3.30 (m overlapping H20, OCH2), 2.80-2.65 (m, 1, CH), 2.45-2.25 and 1.45-1.30 (both m, 1 each, CH2); [a]20 Sg9 +21.2°, [a]20 578 + 22.2°, [a]20 546 + 25.2°, [ac]20 436 + 41.4°, [oc]20 365 + 48.3° (c 0.50, methanol).
Anal. Calcd. for C11H14N502C1: C, 46.57; H, 4.97; N, 24.69; Cl, 12.50. Found:
C, 46.63; H, 4.99; N, 24.58; Cl, 12.59.
.. . , ,,. Z' O 5 PCT/GB95100225 Example 8 (1 S.4R)-4.-(2-Amino-6-chloro-9-H-purin-9 y~-2-cvclopentene 1 methanol Hydrochloride (V>Za) A mixture of ( 1 S,4R)-4-[(2-amino-6-chloro-5-forrnamido-4-pyrimidinyl)amino]-cyclopentene-1-methanol (Example 7, 1.00 g, 3.50 mmol) and triethylorthoformate (Aldrich, Sure Seal, 18 mL) was stirred while concentrated hydrochloric acid (37%, 1.25 mL) was added in one portion. The resulting clear, colorless solution was stirred under nitrogen. A white precipitate began to form after 15 minutes. After 4 hours, TLC of a drop of the reaction mixture dissolved in methanol and neutralized with sodium hydroxide (silica gel plates developed in 10% methanol-chloroform, visualized in tTV
light) showed almost complete conversion of VIa to a higher-Rf material. The precipitate was filtered, washed with t-butyl methyl ether (15 mL) and dried at 0.2 mm Hg/ 25°C
for 18 hours to give the title compound as a white powder (975 mg, 92%), m.p. >300°C
dec.; mass spectrum (CI/CH4): 266(M+1); 1H-NMR (DMSO-d6)8: 8.18 (s, 1, purine CH), 7.2-6.7 (br s, NH2, OH overlapped by water), 6.20 and 5.90 (both m, 1 each, CH=CH), 5.48 (m, 1, NCH), 3.47 (d, J = 5.7 Hz, 2, CH20), 2.90 (m, 1, CH), 2.75-2.55 and 1.75-1.60 (both m, 1 each, CH2).
Anal. Calcd. for C11HI2NSOCl.HCI: C, 43.73; H, 4.34; N, 23.18; Cl, 23.48.
Found: C, 43.62; H, 4.34; N, 23.07; Cl, 23.53.
Example 9 (IS.4R)-4-f2-Amino-6-fcvcloprop~o)-9H-purin-9 yIl 2 ~clopentene I methanol A solution of (1S,4R)-4-chloro-5-formamido-6-{[(4-hydroxymethyl)-2-cyclopenten-ylJamino}pyrimidine (Example 8, 250 mg, 0.883 mmole) was refluxed gently (in an oil bath maintained at 130°C) in n-butanol (dried over 4 A molecular sieves, 5 mL) under nitrogen with cyclopropylamine (Aldrich, 0.30 mL, 4.4 mmol) for 16 hours. A
second portion of cyclopropylamine (0.15 mL) was added and reflex continued for an additional 5 hours. The volatiles were removed and the residual oil redissolved in ethanol-water ( 1:1 ) 218 ~ 10 5 PCT/GB95/00225 with 1 N sodium hydroxide (0.5 mL). Volatiles were again removed and the residue chromatographed on a silica gel flash column (1x10"). (1S, 4R)-[(2,5-Diamino-6-chloro-4-pyrimidinyl)amino]-2-cyclopentene-1-methanol (VI~a, 35 mg, 16%) eluted with 5%
methanol-ethyl acetate. Continued elution with 10% methanol-ethyl acetate gave ( 1 S, 4R)-4-[2-amino-6-(cyclopropylamino)-9H-pmin-9-yl]-2-cyclopentene-1-methanol(IXa) as a light tan solid foam (160 mg, 60%); H-NMR (DMSO-d6)8: 7.58 (s, 1, purine CH), 7.25 (d, J = 4.5 Hz, 1, NH), 6.10 (m, 1, =CH), 5.80-5.75 (m, 3, =CH and NH2), 5.40 (m, 1, NCH), 4.72 (m, l, OH), 3.45 (m, 2, OCH2), 3.0 ( br m, 1, CH of cyclopropyl), 2.80 (br m, 1, CH), 2.70-2.50 (m overlapping solvent, CH), 1.50-1.05 (m,l, CH), 0.70-0.50 (m, 4, 2 CH2 of cyclopropyl).
Anal. Calcd. for C14H18N60Ø20 H20Ø40 CH30H: C, 57.32; H, 6.35; N, 27.85.
Found: C, 57.59; H, 6.48; N, 27.70.
Example 10 11S.4R1-4-f2-Amino-6-( cloprop~)-9H-nurin-9-~l-2-~clopentene 1 methanol (1S,4R)-4-(2-Amino-6-chloro-9-H-purin-9-yl)-2-cyclopentene-1-methanol (US
Patent 5,206,435) or the hydrochloride salt thereof (Example 8) was reffuxed in ethanol with 10 molar equivalents of cyclopropylamine for 2 hours. The resulting solution was cooled to ambient temperature and 1 N sodium hydroxide (1 or 2 molar equivalerns, depending on whether the starting material was VIIa or the hydrochloride salt of VIIa) was added. The volatiles were evaporated in vacuo. (1S,4R)-4-[2-Amino-6-(cyclopropylamino)-9H-purin-9-yl]-2-cyclopentene -1-methanol (IXa) was washed from a silica gel pad eluted with 5%
methanol-chloroform or 10% methanol-ethyl acetate and isolated as a white solid foam (80%); spectra identical to those of the product of Example 9.
WO 95/21161 3 ~ ~. ' ~~ 218 210 5 pCT~GB95100225 Example 11 (1'S.3'S.4'S)-2-Amino-1 9-dihydro-9(3 4-dihydroxy-3-hvdroxymethvl 1 cvclopentyl) 6H
purin-6-one a) (4Rl-4-f (2-Amino-6-chloro-5-formamido-4-p '~~d'lnyl)aminol 1 cyclopentene methanol By the method of Example 7, N-(2-Amino-4,6-dichloro-5-pyrimidinyl)forrnamide (Example 3, 2.56g, 52.4mmo1) was reacted with (4R)-4-amino-1-cyclopentene-1-methanol ( 1.4g, 52.4mmo1), available from (-)-2-azabicyclo[2.2. I ]hept-5-en-3-one (Chiroscience) by methods described in Examples 1-4 and 42 of U.S. Patent 5,049,671. Crystallization from ethyl acetate - methanol gave title compound as white crystals, m.p. 148-150oC; mass spectrum (CI/CH4): 286, 284 (M+1), 190, 188 (B+I~; IH-NMR (DMSO-d6)S: 8.97 and 8.55 (s and d with J = 11.3 Hz, total 1, NHCHO), 8.12 and 7.80 (s and d with J = 11.5 Hz, total 1, CHO), 7.00 and 7.78 (both d, J = 7.4 Hz, total 1, NH), 6.60 and 6.40 (both 8, total 2, NH2), 5.48 (s, 1, = CH), 4.74 (t, J = 5.5 Hz, 1, OH), 4.74-4.60 (m, 1, NCH), 4.0-3.90 (m, 2, CH20), 2.75-2.55 and 2.40-2.15 (both m, 2 each, 2CH~; [a]58920-4.40, [a]57820-5.20, [a]54620-4.go, [a]43620-20.Oo, [a]36520-60.40 (c 0.25, methanol).
Anal. Calcd. for CI1H14N502C1: C, 46.57; H, 4.97; N, 24.69; Cl, 12.50. Found:
C, 46.64; H, 5.01; N, 24.60; Cl, 12.45.
b) (4Rl-4-(2-Amino-6-chloro-9H-purin-9-yl -~cyclonentene 1 methanol A mixture of (4R)-4-[(2-amino-6-chloro-5-foimamido-4-pyrimidinyl)amino]-1-cyclopentene-1-methanol (Part a, 1.60g, 5.65mmo1) and triethylorthoformate (29mL) was stirred while concentrated hydrochloric acid (37%, 2.OmL) was added in one portion. The resulting clear, colourless solution was stirred under nitrogen.
After 5 hours the resulting precipitate was filtered and washed with t-butyl methyl ether (3 x lOmLO and dried to provide white powder (1.25g). This powder was dissolved in water and the pH adjusted to 3 by addition of 1N hydrochloric acid.
The solution was heated at 60oC for 4 hours, cooled, neutralized, and evaporated to a solid which was chromatographed on silica gel. Title compound was eluted with S% methanol chloroform and crystallized from ethanol-ethyl acetate to white crystals, m.p. 145-147oC; mass spectrum (Cl/CH4): 268, 266 (M+1), 172, 170 (B+I~; 1H-NMR (DMSO-d6)8: 8.09 (s, 1, purine CH), 6.9 (br s, 2, NH2), 5.64 (m, 1, = CH), 5.2-5.0 (m, 1, NCH), 4.87 (t, J = 5.5 Hz, 1, OH), 4.05 (m, 2, CH20), 3.0-2.5 (m, 4, 2 CH2).
Anal. Calcd. for C11H12N50C1: C, 49.06; H, 4.64; N, 26.01; Cl, 13.16. Found:
C, 49.18; H, 4.63; N, 26.11; Cl, 13.19.
c) (1S.2S.4R1-4-(2-Amino-6-chloro-9H-purin-9-vl)-2-fhydroJCymethyh' 1 2 cyclo_pentanediol (4R)-4-(2-Amino-6-chloro-9H-purin-9-yl)-1-cyclopentene-1-methanol (Part b, 501mg, 1.89mmol), N-methyhnorpholine N-oxide (60% aqueous solution, Aldrich, 0.33mL, 1.89mmol), osmium tetroxide (2.5% in t-butyl alcohol, Aldrich, 0.47mL), and t-butyl alcohol (l2mL) were heated at 60oC for 1.5 hours. Volatiles were evaporated and the residual solids were chromatographed on silica gel. Title compound was eluted with 10% methanol-chloroform as tan solid (210mg) and resolidified from absolute ethanol to give white powder, m.p. 217-219oC; mass spectrum (Cl/CH4): 302, 300 (M+1), 172, 170 (B+H); 1H-NMR (DMSO-d6)8:
A number of 2-aminopurine nucleoside analogues have been shown to be useful in the treatment or prophylaxis of viral infections, for example the compound of formula (A) N~ ' N / N CA) HO
is described as having potent activity against human immunodeficiency virus (HIS and hepatitis B virus (IdB~ (EP 0434450).
Processes have been proposed for the preparation of 9-substituted-2-aminopurines, generally starting from a pyrimidine compound, coupling with a sugar analogue residue, and cyclisation to form the imidazole ring and introduction of any suitable 6-substituent.
Pyrimidine compounds which have been identified as being usefi~l in the preparation of 9-substituted-2-aminopurines include 2,5-diamino-4,6-dichloropyrimidine, N,N-(4,6-dichloro-2,5-pyrimidinediyl)bis formamide and also N-2-acylated pyrimidine derivatives such as the 2-acetamido and 2-isobutryamide derivatives (US Patent 5087697).
Processes for the synthesis of these intermediates generally involve a number of steps of which some are difficult to perfoirn and produce poor yields, preventing any practical scale up of these processes above a few grams, and are thus di~cult and uneconomical.
,~ , s . y _2_ Processes For the synthesis of the intermediate 2,S-diamino-4,6-dichloropyrimidine include the direct chlorination of readily available 2,5-diamino-4,6-dihydroxypyrimidine using phosphorus oxychloride. The original examination of this reaction was carried out by Temple et aI. (J. Org. Chem. 1975, 40: 3141-3142). These workers concluded that the reaction was unsuccessful, apparently because of degradation of the pyrimidine sing system. Hanson (SmithKline Beecham, WO 91/01310, US Patent 5216161) subsequently described a process for the direct chlorination of 2,5-diamino-4,6-dihydroxypyrimidine by reffuxing with phosphorus oxychloride in the presence of large molar excesses of quaternary ammonium chlorides or amine hydrochlorides. We have examined this process and have obtained, repeatedly, much lower yields (<10%) of crude 2,5-diamino-4,6-dichloropyrimidine than those specified in the SmithKline Beecham patent specification.
The extensive decomposition of the 2,5-diamino-4,6-dihydroxypyrimidine to tars which coat the equipment, combined with the problems of dealing with the copious solids due to the insoluble amine salts, constitute significant drawbacks and make scale-up of such a process impractical. The modifications of Legraverend et al. (Synthesis 1990:
587-589), namely using acetonitrile as a solvent and adding phosphorus pentachloride to the phosphorous oxychloride and quaternary ammonium chloride, result, in our experience in the isolation of approximately 30% (after chromatographic purification) of 2,5-diamino-4,6-dichloropyrimidine on a 2-5 gram scale. Again, scale-up beyond a few grams is impractical due to the formation of tarry precipitates.
A recent Lonza AG patent specification (EP 0 552 758) suggests that higher yields (35-65%) may be obtained with phosphorus oxychloride chlorination when the 5-amino group of 2,5-diamino-4,6-dihydroxypyrimidine is protected with an alkoxycarbonyl protecting group. This modification is claimed to simplify the chlorination step in that the amines and phosphorus pentachloride, employed in the prior processes discussed above are not required. This creates a new problem, namely the need to remove the alkoxycarbonyl protecting groups in order to be able to convert the pyrimidine intermediates to purines.
Indeed, the Lonza AG specification does not show that such 5-protected 2,5-diamino-4,6-dichloropyrimidines may be converted to purines in an advantageous manner.
WO 95/21161 218 210 5 pCT~GB95100225 A process for the synthesis of N,N~-(4,6-dichloro-2,5-pyrimidinediyl)bis formamide is the reaction of 2,5-diamino-4,6-dichloropyrimidine with formic acid and acetic anhydride ' (Harnden et al., J. Med. Chem. 1990, 33:187-196 and US Patent 5,159,076).
' The 5-step route to the N-2-acylated derivatives, and also to 2,5-diamino-4,6-dichloropyrimidine required for the synthesis of N,N-(4,6-dichloro-2,5-pyrimidinediyl)bis-formamide (Temple et al., J. Org. Chem. 1975, 40: 3141-3142), starts from 2-amino-6-chloropyiimidin-4-one and contains steps, which include the introduction of the 5-nitro group and the subsequent handling and reduction of very reactive S-nitro-4,6-dichloropyrimidine intermediates, which make scale-up impractical. The yields on a number of the steps to these intermediates are poor (Legraverend et al., Synthesis 1990:
~ 87-589).
We have now discovered certain new pyrimidine intermediates which are useful in a new synthetic route for the preparation of the above 9-substituted-2-aminopurines and in addition which can be used in the synthesis of the known intermediates described above.
In one aspect of this invention we provide the following novel intermediates which may be utilised in the synthesis of 2-aminopurines, namely compounds of formulae (I), (1T) and ci N / N CHN C ~ N / R2 (II) R1 (I) ~N C1 ~NHC N N Cl H2 N / HCHO
(III) r H N~N C1 w0 95121161 y ' .-, .
wherein R1 and R2, which be the same or different, are selected from C1_g straight-chain alkyl, C1_g branched alkyl, C3_g cycloalkyl, and aryl groups (such as phenyl or naphthyl), which may be optionally substituted, for example by C 1 ~ alkyl or halogen (e.g. Cl). In a preferred embodiment of the invention Rl and R2 are both methyl.
These novel intermediates can be readily prepared in good yields and are useful for the preparation of a wide variety of different types of 2-aminopurines including the nucleoside analogue of formula (A), famciclovir (EP 0182024), penciclovir (EP 0141927), I-i2G
(EP 0343133), (1'S,3'S,4'S)-2-amino-1,9-dihydro-9-[3,4-dihydroxy-3-hydroxymethyl-1-cyclopentyl)-6H-purin-6-one (EP 0420518), and other 9-substituted-2-aminopurines provided that the 9-substituent is not attached by a glycosidic bond.
In a further aspect of this invention we provide processes for the synthesis of the novel intermediates of formulae (>7, ()I) and (III], and the known intermediate 2,5-diamino-4,6-dichloropyrimidine(I~. These processes are illustrated in the simplified diagram below which is designed for illustration only of the possible ways of synthesising these intermediates;
2,5-diamino-4,6-dihydroxypyrimidine.
m 1 s. ~ )l.
WO 95/21161 . ~ 2 1 0 ~ PCT/GB95100225 '- -5-The present invention also provides a process for the preparation of compounds of fornmla (I) which comprises chlorination of 2,5-diamino-4,6-dihydroxypyrimidine with a ' halomethylenimminium salt (V'~lsmeier reagent) of formula (~.
R1 + _ >N CHC1 C1 (v~
wherein R1 and R2 are as defined above Compounds of formula ('~, may be prepared from a variety of formamides of secondary amines by reaction with a variety of acid halides, such as phosphorus oxychloride, phosphorus pentachloride, thionyl chloride, phosgene, and oxalyl chloride, for example as detailed in a review by C. M. Marson, Tetrahedron 1992, 48: 3660-3720 and references therein.
The advantage of protecting the diaminopyrimidine from extensive decomposition during chlorination is achieved by the in situ protection of the amino groups with two molar equivalents of Vilsmeier reagent (~ to give a bis-formamidine intermediate (detected by thin-layer chromatography), which is subsequently chlorinated to a compound of formula (I~ as the reaction with additional equivalents of V'ilsmeier reagent proceeds. The improved solubility of such bis-formamidine derivatives is an added advantage of this process, facilitating the subsequent chlorination to compounds of formula (I) and their isolation and simple purification.
The disadvantage of the use of 5-alkoxycarbonyl protecting groups, as described in the Lonza specification (EP 0552758) is avoided since the formamidine groups in compounds of formula (1~ are readily hydrolysed under mild conditions in a step-wise manner to form the intermediates (II) and (III); or alternatively compounds of formula (I) can be directly hydrolysed to compounds of formula (III).
The compound 2,5-diamino-4,6-dichloropyrimidine (I~ can be prepared by:-WO 95/21161 ~ v ~1 218 210 5 PCT/GB95100225 A) the hydrolysis of a compound of formula (I);
B) the hydrolysis of a compound of formula (II); or ' C) the hydrolysis of a compound of formula (11T). ' The hydrolysis of (1], (In, or (II>7 to 2,5-diamino-4,6-dichloropyrimidine is conveniently carried out at pH 3 +/- 0. S by adding a water-miscible cosolvent, such as ethanol. The hydrolysis is more ei$cient at pH 1-2, with shorter reaction times required than at a higher pH. It is advisable at pH I-2, however, to protect 2,5-diamino-4,6-dichloropyrimidine from hydrolysis to hydroxypyrimidines by extraction, as it is formed, into an organic layer which is not miscible with the aqueous acid. When the pH of the aqueous layer is below 1, extraction of the product into the organic layer is ine~cient (the pKa of (I~ was found to be ca. 0.5 and the pyrimidine ring is thus significantly protonated below pH 1).
Preferably, the acid used for this hydrolysis should be one which is not appreciably soluble in the organic layer, e.g. phosphoric or sulfuric acid. The organic solvent should be one which is stable to aqueous acid and in which (I~ is soluble. Satisfactory solvents for the organic layer include toluene and halocarbon solvents such as methylene chloride, chloroform, and 1,2-dichloroethane. At completion, the organic layer is simply washed, e.g. with saturated aqueous bicarbonate, dried and concentrated to provide (I~
with no purification required.
Compounds of formula (111) can be prepared by:-A) selective hydrolysis of a compound of formula (I); or B) selective hydrolysis of a compound of formula (11).
The hydrolysis of compounds of formula (I) or (1T) to (III) is most efficiently carried out in dilute aqueous acid, preferably in dilute aqueous mineral acid such as sulfuric acid, hydrochloric acid, or phosphoric acid. Prolonged exposure to pH below 1 should be avoided as the chloropyrimidine ring is protonated significantly below pH 1 and may pCT~GB95/00225 _7_ therefore undergo attack by water, generating undesired hydroxypyrimidine by-products.
Preferably, the pH is maintained above 2 and optimally at 3 +/- 0.5 for the e$cient ' formation of (III). In this optimal pH range, the formamidine groups of (I) and (11) are selectively hydrolysed to give (11T) in approximately 70% yield. As the hydrolysis of the ' formamidine groups of (17 and (11) proceed, the secondary amine from which the V'~lsmeier reagent (~ was formed (HNR1R2) is liberated and causes the pH of the solution to rise, thus slowing the hydrolyses. In addition, with certain reactive aliphatic amines HNR1R2, such as N,N-dimethylamine, it is necessary to maintain a pH sui~ciently low to prevent the chloro groups of the pyrimidine ring from displacement by the secondary amine.
We have found that maintaining the pH of the reaction mixtures below 4 avoids significant displacement of the chloro groups by the secondary amine, even with amines as reactive as N,N-dimethylamine. It was thus found optimal to buffer the hydrolyses of (17 and (11) to (11T) at pH 3 +/_ 0.5 or to add increments of acid throughout the hydrolyses in order to maintain the pH in this range.
Optimally, the hydrolysis of compounds of formula (I) or (1T) to (III) is carzied out in a minimum of water with the pH controlled as described above. Under these conditions, (III) precipitates as formed and is simply filtered off and washed with water.
The hydrolysis is carried out at gentle reffux for 4 hours, or at lower temperatures for longer periods of time.
The compounds of formula (1TJ can be prepared by the selective hydrolysis of the compounds of formula (I~. Preferably the selective hydrolysis is carried out with slightly more than two molar equivalents of mineral acid in water or ethanol and warmed for 15-30 minutes.
The compounds of formula ()] can be prepared by reacting 2,5-diamino-4,6-dihydroxypyrimidine with a V'~lsmeier reagent of formula (~.
The compound 2,5-diamino-4,6-dihydroxypyrimidine is commercially available (Sigma, ' Maybridge BTB, Pfaltz and Bauer, Polyorganix).
WO 95121161 ~ * '~ ~ ~ ~ ~ PCT~GB95/00225 -8_ -The novel bis-formamidines of formula (I) are formed and isolated conveniently in high yield when the 2,S-diamino-4,6-dihydroxypytZmidine (or a salt thereof, such as the hydrochloride or the hemisulfate) is treated with at least 4 molar equivalents of a Vilsmeier reagent (V). These chloiination reactions proceed under extremely mild conditions without the formation of copious tarry precipitates which characterises direct chlorinations, as previously described with phosphorus oxychloride and phosphorus oxychloride / quaternary ammonium halides. The V'ilsmeier chlorination of 2,5-diamino-4,6-dihydroxypyrimidine may be carried out in an inert solvent, such as toluene, chloroallcenes, or chloroalkanes (such as methylene chloride, chloroform or 1,2-dichloroethane). Preferably the solvent is 1,2-dichloroethane, chloroform, or methylene chloride. The chlorination may be carried out at 0 to 110°C, preferably at 40-100°C, conveniently at reflux for the solvent used. Reaction times are typically 12 to 48 hours.
Isolation of compounds of formula (I~ is simple and can be readily scaled-up, involving simply washing the reaction solution with an aqueous solution containing sufficient base, such as sodium bicarbonate, to neutralize any hydrogen chloride formed and then concentrating the dried organic layer to obtain the novel chlorinated pyrimidines of formula (I). The compounds of formula (I) are generally stable and may be precipitated from a variety of solvents, such as ethyl acetate, and stored or used without further purification.
Particularly preferred examples of the compounds of formulae (I), (1T) and (III) are:
a) 4,6-Dichloro-2,5-bis-[(dimethylamino)methyleneamino]pyrimidine b) 2-Amino-4,6-dichloro-S_[(dimethylamino)methyleneamino]pyiimidine c) N-(2-Amino-4,6-dichloro-S-pyrimidinyl)formamide According to a further aspect of this invention the novel intermediate of formula (111) can be used in the synthesis of 2-amino-6-chloropurines. In addition compounds of formula (I) or (1T) may also be used in the synthesis of 2-amino-6-chloropurine nucleosides, provided that the amine HNR1R2 (where Rl and R2 are defined earlier) liberated, during the conversion of the pyrimidine intermediate to the purine, is su~ciently unreactive towards the displacement of the chloro group of the 2-amino-6-chloropurines generated. , :. G" _ ; r .-WO 95/21161 ' ' ~ ~ ~ ~ PCT/GB95I00225 _9_ The compounds of formula (II17 share with the previously described N-2-acylated ' derivatives the property of greater reactivity than 2,5-diamino-4,6-dichloropyrimidine toward displacement of a chloro group by an appropriate primary amine or protected ' hydroxylamine. However, such condensations with (II>] (described in more detail below) may be carried out under milder conditions at lower temperatures and with shorter reaction times than with compound (I~, thus resulting in less decomposition of the amines. The condensation products (Vn are isolated in greater yield and purity than the corresponding products (V~ formed in condensations with 2,5-diamino-4,6-dichloropyrimidine (I~. Another advantage of the use of the intermediate (III
over the previously described N-2-acylated derivatives, in addition to greater ease of synthesis, is that the purines generated from (~ do not require deprotection, i. e.
hydrolysis of the N-2-acyl group (these longer processes are described in US Patents 5,087,697 and 5,159, 076).
CI CI
NHCHO HCI ~N From CH(~ NO ~ VIII N
H N N NHR 3 H N ~ ~N ~ ~ ~N
z N I HZN N I
Ma) - M~ (vua) - (vnt) pxd) From Vlla (Famddovir) From Vla ~-NH z ~-NH s EtOH
n-BuOH
NH
N
Z '>
H ZN N N
. i Wherein R3 is hereinafter defined. (Ixa) WO 95/21161 " I~ . ~, ~ ' ~ ~, PCT/GB95/00225 The compound of formula (III) can be used to prepare the novel intermediates of formula (VI) which represent a further feature of the invention:-NHCxo N
(VI) wherein R3 may be hydrogen or any group which is not attached by a glycosidic bond.
Preferably R3 is a hydroxyl or a protected hydroxyl; or a carbocyclic group (e.g. C3_~
carbocyclic), an acyclic group (e.g. C2_g hydrocarbyl) wherein carbon atoms may be substituted by one or more heteroatoms such as N, O or S, or a heterocyclic group (e.g.
C4_~ heterocyclic) in which at least one carbon atom is replaced by a N, 0, or S atom, or a substituted analogue of any thereof (e.g. such substituents are independently selected from C 1 ~allcyl, C 1 ~ alkoxy, hydroxyl or protected hydroxyl, azido, phosphonyl, or halogen), provided that such groups are not attached by a glycosidic bond .
Preferred groups for R3 are hydroxyl or protected hydroxyl.
Further preferred groups for R3 are HO
a.
b. H;
HO
HO
C.
c~
i r! n.
w0 95/21161 ° ' ' 218 210 5 PCT~GB95100225 d. (AcOCH2)2CHCH2CH2- ;
e. HOCH2CH2~HCH2' ;
HZOH
HO
f.
HO
HO
g~ ; and HO
H 0 ~~~~~ ' ., h. H°\
A further preferred group for R3 is ;
HO
Suitable groups for R3 are selected from a; b; c; d; e; and ~ as defined above.
By "hydrocarbyl" it is meant a group containing only hydrogen and carbon atoms, which may contain double and/or triple bonds and which may be straight, branched, cyclic or aromatic.
W095/21161 '~ ,, ~ t~ , ' _ 12_ According to a further feature of the invention we provide a process for the preparation of compounds of formula (Vn which comprises reacting a compound of formula (1TT) with an amine of formula R3NH2, where R3 is defined above. Such condensations are preferably carried out at reflux in a solvent such as ethanol, butanol, water or acetonitrile in the presence of at least one equivalent of a base, such as trialkylamine or potassium or sodium carbonate.
Subsequent references to compounds of formula (VIa, b, c, d, e, ~ g, or h) denote a compound of formula (V>] in which R3 is a group of a, b, c, d, e, i; g, or h as defined above.
A particularly preferred compound of formula(V~ is ( 1 S,4R)-4-[(2-amino-6-chloro-S-formamido-4-pyrimidinyl)amino]-2-cyclopentene-1-methanol (VIa) The novel intermediates (V)7 can be converted by ring closure to the corresponding compounds of formula (VIn:-c~
(VII) N / N
wherein R3 is defined above.
Ring closure of (Vn to (VIn is conveniently carried out in trialkylorthoformates (e.g.
triethylorthoformate or trimethylorthoformate) with concentrated aqueous acid (e.g. 2-4 molar equivalents of hydrochloric, sulfuric acid or methane sulfonic). For example, the hydrochloride salt of (Vaa) i.e. wherein R3 represents group a, begins to precipitate from such orthoformate solutions of (VIa) within minutes and yields above 90% may be achieved by filtration of the precipitate, optimally after several hours at ambient temperature.
. ~ .j . . . ~-w0 95/21161 " ~ ' ' 218 210 5 p~'/GB95/00225 r-- - 13 -The synthesis of 9-substituted-2-amino-6-chloropurines, such as compounds of formula (VIn, in this manner represents a significant improvement over previously published syntheses utilizing triaminopyrimidine intermediates such as (VIIl7:
ci N / ~2 ~N~N 3 (VIII) as described US Patent 4,916,224. The previously-described routes to intermediates such as (V~ are longer and, more importantly, the number of steps to the purine targets after incorporation of the group R3 is greater. Also, triaminopyrimidine intermediates such as (VIII are air- and light-sensitive and extremely difficult to purify due to their polarity and metal-chelating abilities (the isolation from the zinc reduction of diazo intermediates is especially problematic). The novel 5-formamido intermediates of formula (Vn are easily and directly attainable from compounds of formula (IIn in one step and are generally solids which are stable and easily-purified by precipitation from a suitable solvent.
(1'S,3'S,4'S)-2-Amino-1,9-dihydro-9-[3,4-dihydroxy-3-hydroxymethyl-1-cyclopentyl]-6H-purin-6-one (IXtI) (EP0420,518) may be prepared by condensation of the compound of formula(II~ with 4-amino-3-cyclopentene-1-methanol (US patent 5,049,671) to form the compound of formula (VIg) followed by ring closure of the compound of formula (VIg) to prepare the compound of formula (VBg), which may be hydroxylated, with osmium tetroxide/N-methyl-morpholine N-oxide to provide the compound of formula (V>Zh). The compound of formula (VIEa) is hydrolysed to form the compound of formula (IXh).
WO 95/21161 ' ~ ~~ PCT/GB95/00225 2-Amino-6-chloropurine (VIIb) may be prepared by ring closure of novel 2,4-diamino-6-chloro-5-formamidopyrimidine (VIb), conveniently synthesized by condensation of the compound of formula (III) with ammonia. The compound of formula (VIIb) is an intermediate suitable for the synthesis of acyclic antiviral nucleosides, such as famciclovir wherein the 2-amino-6-chloropurine intermediate (Vtld) is conveniently subjected to hydrogenolysis to the 2-aminopurine nucleoside.
Carbocyclic nucleosides may also be synthesized from the compound of formula (Vlib), for example by (Pd-catalyzed coupling with an appropriate carbocyclic intermediate as described in Mac Keith et al., J.Chem.Soc.Perkin Trans 1. 1993: 313-314 and references therein.
The compounds of formula (VITa), (Vllc), (VITe), (VIIf), (Vltg) and (VIEa) are conveniently hydrolyzed to the corresponding guanine compound by reffuxing with aqueous base or acid.
As a further feature of this invention we have found an alternative process for the synthesis of 2,6-diaminopurines (wherein the 6-amino group is substituted by R4 and R5, which may be the same or different, and are selected from H, C 1 _galkyl, C3-6cycloalkyl, aryl (such as phenyl), in particular R4 is H and RS is cyclopropyl) directly from (VI) which advantageously eliminates a step in the process. Such 2-aminopurine compounds can be synthesised directly from the intermediates (VI) by refluxing the compound of formula (VI) with an excess of the amine (HNR4R5) in a reiluxing solvent, such as ethanol, isopropanol, n-propanol, t-butanol or n-butanol.
In particular cases, it may be more useful to utilize 2,5-diamino-4,6-dichloropyrimidine(I~ to prepare compounds of formula (VIII), useful in the synthesis of 8-modified 2-aminopurine nucleoside analogues, such as 8-aza-2-aminopurines (which have broad-spectrum anti-herpes activities described in Storer et al., Spec.
Publ. Roy. Soc.
Chem (Rec. Adv. Chem. Anti-Infect. Agents) 1993, 119: 251-265); in such cases the intermediates (1), (II) and (111) can be used to provide (I~.
Zoa2io5 w0 95/21161 ~ P . t , ' PCT/GB95/00225 Pharmaceutically acceptable esters of certain compounds of the invention may be prepared by esterification using conventional methods known in the art. Such methods include , for " example, the use of an appropriate acid halide or anhydride.
The compounds of the invention, including esters thereof, may be converted into pharmaceutically acceptable salts in a conventional manner by treatment with an appropriate acid or base. An ester or salt of a compound of the invention may be converted into the parent compound, for example, .by hydrolysis.
The following examples are intended for illustration only and are not intended to limit the scope of the invention in any way.
Example 1 4.6-Dichloro-2.5-bis-1 f ~dimethylamino)methylene)amino }pyrimidine 2,5-Diamino-4,6-dihydroxypyrimidine hemisulfate (Sigma, 25.0 g, 0.131 mole) was stirred in chloroform (AR Mallinckrodt, 400 mL) in a 2 L- 3-necked round bottom flask equipped with a reflux condenser (with source of nitrogen connected to the top of the condenser) and an exit for HCl gas connecting another neck of the flask to a NaOH trap.
(Chloromethylene)dimethyl ammonium chloride (V'~lsmeier reagent, Aldrich, 88.0 g, 0.651 mole as 95%) was washed into the flask with additional chloroform (400 mL).
The reaction mixture was brought cautiously to reflux with nitrogen sweeping the HCl evolved into the trap. When the evolution of HCl slowed after about 1 hour of reflux, the sweep was stopped and the reaction kept under a gentle positive pressure of nitrogen from that point. Additional V'~lsmeier reagent (50.0 g, 0.370 mole) was added after 24 hours and reflux continued for an additional 20 hours. The stirred reaction mixture (yellow solution with dark yellow solid) was cooled (ice bath) and diluted with water (sufficient to dissolve the solid, ca. 300 mL). The aqueous layer was adjusted to pH 7 with sodium hydroxide or solid sodium carbonate. The chloroform layer was separated, washed with water (3 x 400 mL), dried (sodium sulfate), and concentrated in vacuo to a dark yellow solid (36 g). This solid was dissolved in ethyl acetate (300 mL), stirred with charcoal (1 g), and filtered with a silica gel pad (3x3 in., packed in ethyl acetate). The pad was WO95121161 .~' "~
washed with additional ethyl acetate and eluents concentrated in vacuo to leave the title compound as a light tan solid (30.75 g, 81% ); m.p. 116-119°C; 1H-NMR
identical to that of recrystallized samples.
Anal. Calcd. for C1pH14N6CI2Ø10 EtOAc: C, 41.92; H, 5.01; N, 28.20; Cl, 23.80.
Found: C, 42.23; H, 4.95; N, 28.46; CI, 24.11.
Recrystallization of such a sample from ethyl acetate gave the title compound as white granules; m.p. 123-125 °C; mass spectrum (CI/CH4): 291, 289 (M+1); 1H-NMR
(DMSO-d6) 8: 8.49 and 8.69 (both s, 1 each, 2CH), 3.16 (s, 3, CH3), 3.03 (s, 6, 2CH3), 2.97 (s, 3, CH3); W (pH 7 phosphate buffer) ~,max 296 nM (E33,300), ,min 248 (5200).
Anal. Calcd. for C10H14N6CI2: C, 41.54; H, 4.88; N, 29.06; Cl, 24.52. Found:
C, 41.59;
H, 4.91; N, 29.01; CI, 24.47.
Example 2 2-Amino-4.6-dichloro-5-~ [tdimethylamino)methylene~] amino ~pyimidine 4,6-Dichloro-2,5-bis-{[(dimethylamino)methylene)amino}pyrimidine (Example 1, 5.87g, 20.3 mmol) was dissolved in 95% ethanol (200 mL) and 6 N aqueous hydrochloric acid (13.5 mL) added. The solution was heated in an oil bath at 55 °C under nitrogen for 30 minutes, at which point TLC (silica gel, 5% methanol-chloroform) showed that starting material had been cleanly converted to a lower-Rf product. The cooled (ice bath) solution was adjusted to pH ~8 with concentrated ammonium hydroxide and the resulting mixture (white precipitate formed) concentrated on a rotary evaporator to ~5 mL to remove ethanol. Additional water (20 mL) was added and the cooled mixture was filtered. The white precipitate was washed with additional water (2 x 20 mL) and dried to give the title compound as a white powder (4.50 g, 95%), m.p. >dec 250 °C ; mass spectrum (CI/CH4): 236, 234 (M+1); 1H-NMR (DMSO-d6)8: 7.59 (s, 1, CH), 6.90 (s, 2, NH2), 3.00 and 2.94 (both s, 3 each, 2CH3); LTV (pH 7 phosphate buffer) ~.max: 328 nM (s 4500), 255 (15,800).
w0 95/21161 '' "' ~ '~
Anal. Calcd. for C7H9NSC12: C, 35.92; H, 3.88: N, 29.92; CI, 30.29. Found: C, 35.66; H, 3.86; N, 29.74; Cl, 30.54.
In another experiment, 2,5-diamino-4,6-dihydroxypyrimidine hemisulfate (Sigma, 48.0 g, 0.250 mole) was reacted as in Example 1 with less V'~lsmeier reagent (7.2 molar equivalents) and the resulting 4,6-dichloro-2,S-bis-{[(dimethylamino)methylene]amino}
pyrimidine (92%), without recrystallization, was hydrolyzed in 95% ethanol (1 L) and 6 N
aqueous hydrochloric acid (110 mL) to provide the title compound of the same purity (elemental analysis and 1H-NMR) as the characterized sample described above (44.2 g.
76% overall from 2,5-diamino-4,6-dihydroxypyrimidine hemisulfate).
Example 3 N-(2-Amino-4.6-dichloro-S-pyiimidinyl)formamide lIIl7 A slurry of 2-amino-4,6-dichloro-5-{[(dimethylamino)methylene]amino}pyrimidine (Example 2, I.50 g, 6.41 mmol) and 1.5 M aqueous potassium phosphate buffer (35 mL, prepared by adjusting the pH of a 1.5 M solution of KHZP04 to 3.2 by addition of 85%
phosphoric acid) was gently refluxed (in an oil bath at 125 °C). After 4 hours of reflux, the pH of the mixture was adjusted from 4 to 3 by addition of 4 drops of 85%
phosphoric acid. After a total of 6 hours of reffux, TLC(silica gel plaxes developed in 5% methanol-chloroform) showed that the starting material had been largely converted to a lower-Rf product. The solid was filtered and washed with water (5 mL), methanol (5 mL), and dried to give the title compound as a white solid (0.900 g, 68%), m.p.
>250°C dec.; mass spectrum (CI/CH4): 209, 207 (M+I); 1H-NMR (DMSO-d6)8: 9.81 and 9.46 (s and d, J =
11 Hz, total 1, NH), 8.25 and 8.00 (s and d, J = 11 Hz, total 1, CHO), 7.69 and 7.63 (both s, total 2, NH2).
Anal. Calcd for CSH4N40C12: C, 29.01; H, 1.95; N, 27.07; Cl, 34.25. Found: C, 29.12;
H, 1.96; N, 27.13; Cl, 34.34.
WO95121161 ~ , : ~". ' a ,' 21821 O5 _; PCT/GB95l00225 - 18 - _.
In another experiment, a slurry of 2-amino-4,6-dichloro-S-{[(dimethyl-amino)methylene]amino}-pyrimidine (Example 2, 25.0 g, 0.107 mol) in 1.5 M
aqueous potassium phosphate buffer (300 mL, prepared as above) was gently refluxed for 4 hours.
pH was maintained at 3.2 by addition of 85% phosphoric acid, as required, throughout this period. The precipitate was filtered, washed with water (3 x 10 mL), methanol (2 x mL), and dried (50°C, 25 mm Hg) to give the title compound as an off white powder (16.0 g, 72%) with purity identical to that of the characterized sample described above (elemental analysis and 1H-NMR).
EXamDle 4 2.5-Diamino-4.6-dichloropyrimidine fIVI
4,6-Dichloro-2,5-bis-{[(dimethylamino)methylene]amino}pyrimidine (Example l, 1.00 g, 3.36 mmol) in ethanol (25 mL) and pH 3.2 aqueous potassium phosphate buffer (1.5 M, 10 mL, prepared as described in Example 3) was refluxed for 24 hours. During reflux, the pH was maintained at ca. 3 by addition of 85% phosphoric acid, as required.
The ethanol was evaporated in vacuo and waer added (10 mL). This solution was extracted with chloroform (3 x 25 mL). The comnined chloroform layers were dried (sodium sulfate) and chloroform evaporated to leave a solid (0.40 g). Crystallization of this solid from ethanol-water/ 4:1 gave the title compound (I~ as off white needles (0.324 g, 52%);
darkens and shrinks to black solid above 185°C, does not become fluid below 300°C ; .[Lit. 198°C
(Legraverend et al., Synthesis 1990:587-589) and 188-191°C (Temple et al., J. Org.
Chem. 1975, 40:3141-3142)]; mass spectrum (CI/CH4): 181, 179 (M+1); 1H-NMR
(DMSO-d6)8: 6.50 (br s, 2, NH2), 4.73 (br s, 2, NH2).
Anal. Calcd. for C4H4N4C12Ø12 EtOH: C, 27.60; H, 2.58; N, 30.36; Cl, 38.42.
Found:
C, 27.99; H, 2.39; N, 30.42; Cl, 38.74.
WO 95/21161 ' ~ ' ' ~ 18 210 5 p~'/GB95/00225 Example 5 2.5-Dia.mino-4.6-dichloropvrimidine (IVl A mixture of 2-amino-4,6-dichloro-5-[(dimethylamino)methyleneJamino}pyrimidine (Example 2, 500 mg, 2.14 mmol), pH 3.2 aqueous potassium phosphate buffer (1.5 M, 6 mL, prepared as described in Example 3), water (1 mL), and ethanol (5 mL) was refluxed gently for 28 hours. During the reflux period, pH was maintained at ca. 3 by addition of 85% phosphoric acid. Volatiles were evaporated in vacuo and the residual solids partitioned between water (30 mL, adjusted to ph 8 with dilute ammonium hydroxide) and chloroform (75 mL). The chloroform layer was dried (sodium sulfate) and the chloroform evaporated to leave off white solid (0.30 g). Crystallization of this solid from ethanol:water/ 4:1 gave the title compound (IV) as light pink needles (332 mg, 61%);
darkens and shrinks to black solid above 185°C, does not become fluid below 300°C;
1H-NMR (DMSO-d6) and mass spectra, identical to those described in Example 4.
Anal. Calcd. for C4H4N4C12: C, 26.83; I~ 2.25; N, 31.30; Cl, 39.61. Found: C, 26.93;
H, 2.25; N, 31.24; Cl, 39.52.
Example 6 2.5-Diamino-4.6-dichloropnimidine (T~
N-(2-Amino-4,6-dichloro-5-pyrimidinyl)formamide (Example 3, 500 mg, 2.42 mmol) was dissolved in 0.1 N hydrochioric acid (5 mL, 2.5 mequiv) and ethanol (7 mL) at reflux.
The solution was refluxed for 5 hours. Volatiles were removed in vacuo. The residue was partitioned between water (30 mL) adjusted to pH 8 with dilute ammonium hydroxide and ethyl acetate (75 mL). The ethyl acetate layer was dried (sodium sulfate).
Evaporation of the ethyl acetate left pink solid (0.40 g). Recrystallization of the solid from 95% ethanol gave the title compound (IV) as light pink needles (280 mg, 65%); darkens and shrinks to black solid above 185°C, does not become fluid below 300°C ; 1H-NMR (DMSO-d6) and mass spectra identical to those described in Example 4.
-A
WO 95/21161 . ' ' ~ ~ ~ PCTIGB95/00225 -20- ~-Anal. Calcd. for C4H4N4C12: C.26.83; H.2.25; N.31.30; C1.39.61. Found C.26.95;
H.2.24; N. 31.19; Cl. 39.53.
Example 7 ( 1 S.4R)-4-f (2-Amino-6-chloro-5-formamido-4-pvrimidinyl)amino] 2 cvclopentene 1 methanol (VIa~
N-(2-Amino-4,6-dichloro-5-pyiimidinyl)formamide (Example 3, 2.07 g, 10.0 mmol) was stirred in refluxing absolute ethanol (40 mL) under nitrogen to achieve partial dissolution.
To this stirred mixture was added a solution of freshly prepared (1S,4R)-4-amino-2-cyclopentene-1-methanol (PCT Application 9204015.3, 1.57 g, 12.5 mmol as 90%) in ethanol ( 15 mL) followed by triethylamine (3 .5 mL, 25 mmol, freshly distilled from calcium hydride). After 14 hours of reflux, the resulting dark solution was cooled and 1 N
sodium hydroxide ( 10 mL) was added. The volatiles were evaporated in vacuo.
The residual tan solid foam was dissolved in 5% methanol-ethyl acectate, and the solution was washed through a silica gel pad to give the title compound as an off white solid (2.50 g, 88%), after evaporation of solvents. Recrystallization of the solid from ethyl acetate-methanol (20:1) gave the title compound (VIa) as fine white crystals (2.29 g, 81%), m.p.
177-178°C; mass spectrum (CI/CH4): 286, 284 (M+1), 190, 188 (B+I~; 1H-NMR
(DMSO-d6)8: 8.99 and 8.58 (s and d, J = 11.1 Hz, total 1, amide NH), 8.11 and 7.80 (s and d, J = 11.1 Hz, total 1, amide CH), 6.77 and 6.61 (two d, J = 8.0 Hz) overlapping 6.60 and 6.48 (two br s, total 3, NH and NH2), 5.85 and 5.70 (two m, 1 each, CH=CH), 5.15-5.00 (m, 1, NCH), 4.71 (t, J = 5.1, 1, OH), 3.45-3.30 (m overlapping H20, OCH2), 2.80-2.65 (m, 1, CH), 2.45-2.25 and 1.45-1.30 (both m, 1 each, CH2); [a]20 Sg9 +21.2°, [a]20 578 + 22.2°, [a]20 546 + 25.2°, [ac]20 436 + 41.4°, [oc]20 365 + 48.3° (c 0.50, methanol).
Anal. Calcd. for C11H14N502C1: C, 46.57; H, 4.97; N, 24.69; Cl, 12.50. Found:
C, 46.63; H, 4.99; N, 24.58; Cl, 12.59.
.. . , ,,. Z' O 5 PCT/GB95100225 Example 8 (1 S.4R)-4.-(2-Amino-6-chloro-9-H-purin-9 y~-2-cvclopentene 1 methanol Hydrochloride (V>Za) A mixture of ( 1 S,4R)-4-[(2-amino-6-chloro-5-forrnamido-4-pyrimidinyl)amino]-cyclopentene-1-methanol (Example 7, 1.00 g, 3.50 mmol) and triethylorthoformate (Aldrich, Sure Seal, 18 mL) was stirred while concentrated hydrochloric acid (37%, 1.25 mL) was added in one portion. The resulting clear, colorless solution was stirred under nitrogen. A white precipitate began to form after 15 minutes. After 4 hours, TLC of a drop of the reaction mixture dissolved in methanol and neutralized with sodium hydroxide (silica gel plates developed in 10% methanol-chloroform, visualized in tTV
light) showed almost complete conversion of VIa to a higher-Rf material. The precipitate was filtered, washed with t-butyl methyl ether (15 mL) and dried at 0.2 mm Hg/ 25°C
for 18 hours to give the title compound as a white powder (975 mg, 92%), m.p. >300°C
dec.; mass spectrum (CI/CH4): 266(M+1); 1H-NMR (DMSO-d6)8: 8.18 (s, 1, purine CH), 7.2-6.7 (br s, NH2, OH overlapped by water), 6.20 and 5.90 (both m, 1 each, CH=CH), 5.48 (m, 1, NCH), 3.47 (d, J = 5.7 Hz, 2, CH20), 2.90 (m, 1, CH), 2.75-2.55 and 1.75-1.60 (both m, 1 each, CH2).
Anal. Calcd. for C11HI2NSOCl.HCI: C, 43.73; H, 4.34; N, 23.18; Cl, 23.48.
Found: C, 43.62; H, 4.34; N, 23.07; Cl, 23.53.
Example 9 (IS.4R)-4-f2-Amino-6-fcvcloprop~o)-9H-purin-9 yIl 2 ~clopentene I methanol A solution of (1S,4R)-4-chloro-5-formamido-6-{[(4-hydroxymethyl)-2-cyclopenten-ylJamino}pyrimidine (Example 8, 250 mg, 0.883 mmole) was refluxed gently (in an oil bath maintained at 130°C) in n-butanol (dried over 4 A molecular sieves, 5 mL) under nitrogen with cyclopropylamine (Aldrich, 0.30 mL, 4.4 mmol) for 16 hours. A
second portion of cyclopropylamine (0.15 mL) was added and reflex continued for an additional 5 hours. The volatiles were removed and the residual oil redissolved in ethanol-water ( 1:1 ) 218 ~ 10 5 PCT/GB95/00225 with 1 N sodium hydroxide (0.5 mL). Volatiles were again removed and the residue chromatographed on a silica gel flash column (1x10"). (1S, 4R)-[(2,5-Diamino-6-chloro-4-pyrimidinyl)amino]-2-cyclopentene-1-methanol (VI~a, 35 mg, 16%) eluted with 5%
methanol-ethyl acetate. Continued elution with 10% methanol-ethyl acetate gave ( 1 S, 4R)-4-[2-amino-6-(cyclopropylamino)-9H-pmin-9-yl]-2-cyclopentene-1-methanol(IXa) as a light tan solid foam (160 mg, 60%); H-NMR (DMSO-d6)8: 7.58 (s, 1, purine CH), 7.25 (d, J = 4.5 Hz, 1, NH), 6.10 (m, 1, =CH), 5.80-5.75 (m, 3, =CH and NH2), 5.40 (m, 1, NCH), 4.72 (m, l, OH), 3.45 (m, 2, OCH2), 3.0 ( br m, 1, CH of cyclopropyl), 2.80 (br m, 1, CH), 2.70-2.50 (m overlapping solvent, CH), 1.50-1.05 (m,l, CH), 0.70-0.50 (m, 4, 2 CH2 of cyclopropyl).
Anal. Calcd. for C14H18N60Ø20 H20Ø40 CH30H: C, 57.32; H, 6.35; N, 27.85.
Found: C, 57.59; H, 6.48; N, 27.70.
Example 10 11S.4R1-4-f2-Amino-6-( cloprop~)-9H-nurin-9-~l-2-~clopentene 1 methanol (1S,4R)-4-(2-Amino-6-chloro-9-H-purin-9-yl)-2-cyclopentene-1-methanol (US
Patent 5,206,435) or the hydrochloride salt thereof (Example 8) was reffuxed in ethanol with 10 molar equivalents of cyclopropylamine for 2 hours. The resulting solution was cooled to ambient temperature and 1 N sodium hydroxide (1 or 2 molar equivalerns, depending on whether the starting material was VIIa or the hydrochloride salt of VIIa) was added. The volatiles were evaporated in vacuo. (1S,4R)-4-[2-Amino-6-(cyclopropylamino)-9H-purin-9-yl]-2-cyclopentene -1-methanol (IXa) was washed from a silica gel pad eluted with 5%
methanol-chloroform or 10% methanol-ethyl acetate and isolated as a white solid foam (80%); spectra identical to those of the product of Example 9.
WO 95/21161 3 ~ ~. ' ~~ 218 210 5 pCT~GB95100225 Example 11 (1'S.3'S.4'S)-2-Amino-1 9-dihydro-9(3 4-dihydroxy-3-hvdroxymethvl 1 cvclopentyl) 6H
purin-6-one a) (4Rl-4-f (2-Amino-6-chloro-5-formamido-4-p '~~d'lnyl)aminol 1 cyclopentene methanol By the method of Example 7, N-(2-Amino-4,6-dichloro-5-pyrimidinyl)forrnamide (Example 3, 2.56g, 52.4mmo1) was reacted with (4R)-4-amino-1-cyclopentene-1-methanol ( 1.4g, 52.4mmo1), available from (-)-2-azabicyclo[2.2. I ]hept-5-en-3-one (Chiroscience) by methods described in Examples 1-4 and 42 of U.S. Patent 5,049,671. Crystallization from ethyl acetate - methanol gave title compound as white crystals, m.p. 148-150oC; mass spectrum (CI/CH4): 286, 284 (M+1), 190, 188 (B+I~; IH-NMR (DMSO-d6)S: 8.97 and 8.55 (s and d with J = 11.3 Hz, total 1, NHCHO), 8.12 and 7.80 (s and d with J = 11.5 Hz, total 1, CHO), 7.00 and 7.78 (both d, J = 7.4 Hz, total 1, NH), 6.60 and 6.40 (both 8, total 2, NH2), 5.48 (s, 1, = CH), 4.74 (t, J = 5.5 Hz, 1, OH), 4.74-4.60 (m, 1, NCH), 4.0-3.90 (m, 2, CH20), 2.75-2.55 and 2.40-2.15 (both m, 2 each, 2CH~; [a]58920-4.40, [a]57820-5.20, [a]54620-4.go, [a]43620-20.Oo, [a]36520-60.40 (c 0.25, methanol).
Anal. Calcd. for CI1H14N502C1: C, 46.57; H, 4.97; N, 24.69; Cl, 12.50. Found:
C, 46.64; H, 5.01; N, 24.60; Cl, 12.45.
b) (4Rl-4-(2-Amino-6-chloro-9H-purin-9-yl -~cyclonentene 1 methanol A mixture of (4R)-4-[(2-amino-6-chloro-5-foimamido-4-pyrimidinyl)amino]-1-cyclopentene-1-methanol (Part a, 1.60g, 5.65mmo1) and triethylorthoformate (29mL) was stirred while concentrated hydrochloric acid (37%, 2.OmL) was added in one portion. The resulting clear, colourless solution was stirred under nitrogen.
After 5 hours the resulting precipitate was filtered and washed with t-butyl methyl ether (3 x lOmLO and dried to provide white powder (1.25g). This powder was dissolved in water and the pH adjusted to 3 by addition of 1N hydrochloric acid.
The solution was heated at 60oC for 4 hours, cooled, neutralized, and evaporated to a solid which was chromatographed on silica gel. Title compound was eluted with S% methanol chloroform and crystallized from ethanol-ethyl acetate to white crystals, m.p. 145-147oC; mass spectrum (Cl/CH4): 268, 266 (M+1), 172, 170 (B+I~; 1H-NMR (DMSO-d6)8: 8.09 (s, 1, purine CH), 6.9 (br s, 2, NH2), 5.64 (m, 1, = CH), 5.2-5.0 (m, 1, NCH), 4.87 (t, J = 5.5 Hz, 1, OH), 4.05 (m, 2, CH20), 3.0-2.5 (m, 4, 2 CH2).
Anal. Calcd. for C11H12N50C1: C, 49.06; H, 4.64; N, 26.01; Cl, 13.16. Found:
C, 49.18; H, 4.63; N, 26.11; Cl, 13.19.
c) (1S.2S.4R1-4-(2-Amino-6-chloro-9H-purin-9-vl)-2-fhydroJCymethyh' 1 2 cyclo_pentanediol (4R)-4-(2-Amino-6-chloro-9H-purin-9-yl)-1-cyclopentene-1-methanol (Part b, 501mg, 1.89mmol), N-methyhnorpholine N-oxide (60% aqueous solution, Aldrich, 0.33mL, 1.89mmol), osmium tetroxide (2.5% in t-butyl alcohol, Aldrich, 0.47mL), and t-butyl alcohol (l2mL) were heated at 60oC for 1.5 hours. Volatiles were evaporated and the residual solids were chromatographed on silica gel. Title compound was eluted with 10% methanol-chloroform as tan solid (210mg) and resolidified from absolute ethanol to give white powder, m.p. 217-219oC; mass spectrum (Cl/CH4): 302, 300 (M+1), 172, 170 (B+H); 1H-NMR (DMSO-d6)8:
8.29 (s, 1, purine CH), 6.9 (br s, 2, NHS, 5.15-4.90 (m, 1, NCH), 4:80 (d, J =
3.9 Hz) overlapping 4.78 (t, J = 3.5 Hz, total 2, 2 OH), 4.30 (s) overlapping 4.3-4.2 (m, total 2, OH and OCH), 3.45-3.35 (m, overlapping water, CH20H), 2.25-2.05 (m, 4, 2 CHI.
Anal. Calcd. for C11H14N503C1: C, 44.08; H, 4.71; N, 23.37; Cl, 11.83. Found:
C, 43.89; H, 4.80; N, 23.16; Cl, 11.73.
d) (1'S.3'S.4'Sl-2-Amino-1.9-dihvdro-9-(3 4-dihydroxy-3-hvdroxymethyl-1-cyclopentyl)-6H~urin-6-one (1 S,2S,4R)-4-(2-Amino-6-chloro-9H-purin-9-yl)-2-(hydroxymethyl)-1,2-cyclopen-tanediol (Part c, 90mg, 0.27mmole) was refluxed in 1N hydrochloric acid (2.7mL) for 45 minutes. Volatiles were evaporated in vacuo. Portions of water were evaporated and the residue was redissolved in water. The pH was adjusted to 5 with hydrochloric acid and the resulting mixture cooled, filtered, and the precipitate dried to provide the title compound as an off white powder (5lmg, 68%), m.p. >300odec.; mass spectrum (CI/CH4): 283 (M+1); 1H-NMR(DMSO-d6) identical with that described in U.S. Patent 5,233,041.
Example 12 N-(2.4-Diamino-6-chloro-5-pvrimidinyllformanvde N-(2-Amino-4,6-dichloro-5-pyrimidinyl)formamide (Example 3, SOOmg, 2.14mmo1) and ammonia (150mL) was stirred in a Purr bomb at SOoC for 18 hours. The ammonia was evaporated and the residual solid triturated with water (lOmL). The solid was dried to give the title compound as red powder (400mg, 89%), m.p.>300oC; mass spectrum (CI/CH4): 190, 188 (M+1); 1H-NMR(DMSO-d6)8: 9.05 and 8.60 (both br s, total 1, NHCH_O), 8.1 and 7.8 (both br s, total 1, NH_CHO), 6.80-6.20 (4 br s, total 4, 2 NH2).
Anal. Calcd. for CSH6NSOC1: C, 32.01; H, 3.22; N, 37.34; Cl, 18.90. Found: C, 31.97;
H, 3.23; N, 37.26; Cl, 19.00.
3.9 Hz) overlapping 4.78 (t, J = 3.5 Hz, total 2, 2 OH), 4.30 (s) overlapping 4.3-4.2 (m, total 2, OH and OCH), 3.45-3.35 (m, overlapping water, CH20H), 2.25-2.05 (m, 4, 2 CHI.
Anal. Calcd. for C11H14N503C1: C, 44.08; H, 4.71; N, 23.37; Cl, 11.83. Found:
C, 43.89; H, 4.80; N, 23.16; Cl, 11.73.
d) (1'S.3'S.4'Sl-2-Amino-1.9-dihvdro-9-(3 4-dihydroxy-3-hvdroxymethyl-1-cyclopentyl)-6H~urin-6-one (1 S,2S,4R)-4-(2-Amino-6-chloro-9H-purin-9-yl)-2-(hydroxymethyl)-1,2-cyclopen-tanediol (Part c, 90mg, 0.27mmole) was refluxed in 1N hydrochloric acid (2.7mL) for 45 minutes. Volatiles were evaporated in vacuo. Portions of water were evaporated and the residue was redissolved in water. The pH was adjusted to 5 with hydrochloric acid and the resulting mixture cooled, filtered, and the precipitate dried to provide the title compound as an off white powder (5lmg, 68%), m.p. >300odec.; mass spectrum (CI/CH4): 283 (M+1); 1H-NMR(DMSO-d6) identical with that described in U.S. Patent 5,233,041.
Example 12 N-(2.4-Diamino-6-chloro-5-pvrimidinyllformanvde N-(2-Amino-4,6-dichloro-5-pyrimidinyl)formamide (Example 3, SOOmg, 2.14mmo1) and ammonia (150mL) was stirred in a Purr bomb at SOoC for 18 hours. The ammonia was evaporated and the residual solid triturated with water (lOmL). The solid was dried to give the title compound as red powder (400mg, 89%), m.p.>300oC; mass spectrum (CI/CH4): 190, 188 (M+1); 1H-NMR(DMSO-d6)8: 9.05 and 8.60 (both br s, total 1, NHCH_O), 8.1 and 7.8 (both br s, total 1, NH_CHO), 6.80-6.20 (4 br s, total 4, 2 NH2).
Anal. Calcd. for CSH6NSOC1: C, 32.01; H, 3.22; N, 37.34; Cl, 18.90. Found: C, 31.97;
H, 3.23; N, 37.26; Cl, 19.00.
Claims (15)
1. A compound of formula (I) wherein R1 and R2, which may be the same or different, are selected from C1-8 alkyl, C3-8 cycloalkyl, and unsubstituted phenyl or naphthyl or phenyl or naphthyl substituted by C1-4alkyl or halogen.
2. A compound of formula (I) as claimed in claim 1 wherein R1 and R2 are both C1-8 alkyl.
3. A compound of formula (II) wherein R1 and R2 are as defined in claim 1 or 2.
4. A compound of formula (III)
5. A compound of formula (VI) wherein R3 is a group selected from:
(AcOCH2)2CHCH2CH2-;
(AcOCH2)2CHCH2CH2-;
6. A compound of formula (VI) as claimed in claim 5 wherein R3 is
7. A process for the preparation of a compound of formula (VII) wherein R3 is as defined in claim 5 or 6, comprising ring closure of a compound of formula (VI) as defined in claim 5 in the presence of an acid.
8. A process for the preparation of a compound of formula (VI) wherein R 3 is as defined in claim 5 or 6, comprising reacting a compound of formula (III) as defined in claim 4 with an amine of formula R3NH2 in the presence of a base.
9. A process for the preparation of a compound of formula (I) as defined in claim 1 comprising of reacting 2,5-diamino-4,6-dihydroxypyrimidine with a compound of formula (V) wherein R1 and R2 are as defined in claim 1 or 2.
10. A process for the preparation of a compound of formula (II) wherein R1 and R2 are defined in claim 1 or 2; comprising hydrolysing a compound of formula (I) as defined in claim 1.
11. A process for the preparation of a compound of formula (III) by hydrolysing a compound of formula (I) as defined in claim 1, or a compound of formula (II) as defined in claim 3.
12. A process for the preparation of a compound of formula (VI) wherein R3 is as defined in claim 5 or 6 ; comprising reacting a compound of formula (III) as defined in claim 4 with an amine of formula R3NH2.
13. A process for the preparation of 2,5-diamino-4,6-dichloropyrimidine by the hydrolysis of a compound of formula (I) as defined in claim 1, a compound of formula (II) as defined in claim 3, or a compound of formula (III) as defined in claim 4.
14. A process for the preparation of 2,6-diaminopurines wherein the 6-amino group is substituted by R4 and R5, which may be the same or different and are selected from hydrogen, C1-8alkyl, C3-6cycloalkyl or phenyl, by reaction of a compound of formula (VI) as defined in claims 5 or 6 with an excess of amine NHR4R5 in a refluxing solvent.
15. A process for the preparation of (1S,4R)-4-[2-amino-6-(cyclopropylamino)-9H-purin-9-yl]-2-cyclopentene-1-methanol by reaction of a compound of formula (VI) as defined in claim 6 with an excess of cyclopropylamine in a refluxing solvent.
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| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| GB9402161.5 | 1994-02-04 | ||
| GB9402161A GB9402161D0 (en) | 1994-02-04 | 1994-02-04 | Chloropyrimidine intermediates |
| PCT/GB1995/000225 WO1995021161A1 (en) | 1994-02-04 | 1995-02-03 | Chloropyrimide intermediates |
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