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AU775429B2 - A method for inhibiting immunoglobulin-induced toxicity resulting from the use of immunoglobulins in therapy and in vivo diagnosis - Google Patents

A method for inhibiting immunoglobulin-induced toxicity resulting from the use of immunoglobulins in therapy and in vivo diagnosis Download PDF

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AU775429B2
AU775429B2 AU93406/01A AU9340601A AU775429B2 AU 775429 B2 AU775429 B2 AU 775429B2 AU 93406/01 A AU93406/01 A AU 93406/01A AU 9340601 A AU9340601 A AU 9340601A AU 775429 B2 AU775429 B2 AU 775429B2
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amino acid
immunoglobulin
antibody
mutated
toxicity
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Mae Joanne Rosok
Dale E. Yelton
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Bristol Myers Squibb Co
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Description

AUSTRALIA
Patents Act COMPLETE SPECIFICATION
(ORIGINAL)
Class Int. Class Application Number: Lodged: Complete Specification Lodged: Accepted: Published: Priority Related Art: 0.00 .0:0 .0 0 .000 *.oo Name of Applicant: Bristol-Myers Squibb Company and Mae Joanne Rosok Actual Inventor(s): Mae Joanne Rosok, Dale E Yelton Address for Service: PHILLIPS ORMONDE FITZPATRICK Patent and Trade Mark Attorneys 367 Collins Street Melbourne 3000 AUSTRALIA Invention Title: A METHOD FOR INHIBITING IMMUNOGLOBULIN-INDUCED TOXICITY RESULTING FROM THE USE OF IMMUNOGLOBULINS IN THERAPY AND IN VIVO DIAGNOSIS Our Ref: 657417 POF Code: 140109/140109, 261014 The following statement is a full description of this invention, including the best method of performing it known to applicant(s): -1s06q la A METHOD FOR INHIBITING IMMUNOGLOBULIN-INDUCED TOXICITY RESULTING FROM THE USE OF IMMUNOGLOBULINS IN THERAPY AND IN VIVO DIAGNOSIS The present application is a divisional application from Australian patent application number 39688/97, the entire disclosure of which is incorporated herein by reference.
Throughout this application various publications are referenced. The disclosures of these publications in their entireties are hereby incorporated by reference into this application in order to more fully describe the state of the art to which this invention pertains.
TECHNICAL FIELD OF THE INVENTION The present invention relates to methods for inhibiting or reducing immunoglobulin-induced toxicity resulting from therapy or in ivivo diagnosis.
Specifically, in lieu of using unmodified antibodies or recombinant binding proteins for in vivo use, the invention provides the use of modified antibodies or recombinant binding proteins which have been structurally altered in the constant domain so that upon administration immunoglobulin-induced toxicity is reduced or inhibited.
BACKGROUND OF THE INVENTION Over the years investigators have attempted to harness the inmmune system for therapeutic use. Immunoglobulin (Ig) molecules which constitute an important part of the immune system are of great interest because they react with a diverse family of ligands, possess different effector functions and are of great biological importance. Despite its potential, a persistent problem with W: neDespeci39688-dtvsonl.do inmunoglobulin irnmunothcrapy has been. among other problems. the toxic effect to normal cells of using antibodies which recognize both normal and diseased cells.
This problem is far-reaching because the majority of antibodies presently available recognize a target located on both normal and Jiseased ceils (Slavin-Chiorini. et al..
Int. J. Cancer 97-103 i 1993)).
The constant region can oromote cell death through antibody dependent cell mediated cytotoxicity (A.DCC) or by complement dependent cyrotoxiciry (CDC).
Despite the deletion of portions of the constant region. particularly the CH: domain.
the antigen binding function can be retained Yelton. M. Scharf. Mutant monoclonal antibody with alterations in biological functions. J. Exp. Methods 156:1131-1148 (1982)).
Generally, whole antibody molecules are composed of two heavy and two light chains which are held together by covalent bonds (disulfide) and non-covalent interactions. Each chain contains a variable region and a constant region The variable regions at the amino termini of the two chains form the antigen binding region. The constant region of the H chain has three components or domains.
Occasionally. the first constant region domain (CHI) interacts with the C region of 0 the L chain through hydrophobic interactions and generally a disulfide bond, depending on isorype. The next C region stretch is the hinge-acting disulfide bond stably introduced between two H chains. The second constant region domain (CH 2 is adjacent to the hinge region. CH 2 contains sequences important for effector functions of the antibody, such as the sequences responsible for complement fixation, and Fc receptor binding The third constant region domain (CH 3 is located at the carboxyl terminus of the H chain, and is considered to play an important role in H chain assembly as well as some C region functions.
*o* Today many anzribodics in clinical trials are directed against tumor associated antigens. Mosi rumor associated antigens are not turnor specific but are also oeneraily found on the cell surface of some normal, non-tumorigernic cells. The clinical use of some antibodies directed against tumor associated antigens are limited because of the tcxicity associated with their use. Therefore, there is a need for methods for inhibitine toxictv associated with inmuino!obulin use in the fieid of disease therapy therapy for rumors. kidney disease. and the ike)and in vivo diagnosis.
We addressed this need by discovering methods for inhibiting or reducing toxicity to normal cells generally associated with immunoglobulin immunotherapy or in vive diagnosis, wherein the immunoglobulin recognizes both diseased and normal cells.
Our discovery involves generating imrmunoglobulin molecules or Ig fusion proteins having structurally altered constant regions which inhibit or reduce 1 immunoglobulin-induced toxicity.
The above discussion of background art is included to explain the context of the **invention. It is not to be taken as an admission or suggestion that any of the material *referred to was published, known or part of the common general knowledge in Australia at the priority date of any of the claims of this specification.
Throughout the description and claims of this specification the word "comprise" and variations of that word such as "comprises" and "comprising" are not intended to 25 exclude other additives, components, integers or steps.
St1 1ARY OF THE INVENTION Thne Freset in\'viion Droxides methods !Or iriJ-iti n immu-Ininoglobuilli-m7,duccd 1ox:citv by using knowTin imrunodobulin or I, sion, procein molecules which are strucurally altered in their constan re2ions so that the resulting structurally altered imnmunoiobulin or I [usion protein moiccules exhibit reduced or inhibited :oxicitv in compared to Lheir on2inal unmodifled counterarts.
Su-ucruiral alteration of the constant re21on ma';3, be e.ffected in a ni-mber of- %ays a-s long as it results in reCucinc or irnloitirn2 imimunoglobuiin-induceo tixc!1111 In one apct the present ivetion provides a method for ihibiting intmgobuini-ixuced toxicity resulting from immunoglobulin immunotherapy in a subject comprising administering an immunoglobulin molecule to the subject, the immunoglobulin molecule having a variable region and a constant region, the immunoglobulin molecule being modified prior to administration by 11 structurally altering multiple toxicity-associated domains in the CH2 domain so that immunoglobulin-induced toxicity is inhibited.
In accordance With tLhe practzice of onie embodiment of the invtntion. struc-tural alteration of the constant region, is effected bv deletion of the enrtire constant re2ion1.
In a:-other e-mbodimrent. only the CH:~ domain is delered. i another enibodi-Ment.
onl%- that por-tioni of the C'14 domain that binds the Fc receptor is deieted. IP vet another emnbodiment. orilv thai portion of The ClH-, domain that binds zhe complement comconent Clcl is deleted. Alze-nativtoiv. in another embodimrent. muitirole deietions :in discrete Fc receptor and connpieme rnt component binding domnains are effected.
A~emt~e:,str'uccLLrai 2!iterat;;in is ettectec or mu- mutaticon-s in !ne *c--domainl Such as am :o .*nzeru-,.ons, c ruoiszir-utions. Themuato or ~mutaz:ons mus reutn~tICItn rrango;:-nuc2oxcr.Byw: examole. the am *io acids in- muliile toxicitw. z:soc'-ar-ed docmains mtecoi-szanre2i~n can be altered So as to render the constant Tregton unabie to m-eci-ate a D-CC resconse or activate complement ther-eby iruotttng IMunI-2obuiin. !nouced toxic rv resulting from imrntinotheraov. Alternatively. multinie amino ac:c S m a singie toxtc associatedi domai*n in the constant reo a eatrc 00- Further, altemnativeiv. strucairai aittration can be effected by isorvpe switcatung resulting in an altered iraunoglobulin molecule that either does not induce- toxicirv or induces some limited toxicirv but does not cause a harmful effect. For example.
isorvocL~ switching can result In the constant req!on be~ng unable to mediate a CDC or ADCC response or some other activity which mediates toxicity.
BRIEF DESCRIPTION OF THE FIGURES Figure 1 is a line graph showing plasma clearance in high Ley expressing dogs using chimeric BR96 versus constant region mutant of cBR96-2.
Figure 2 is a schematic diagram of a plasmid designated pTWD-cJVK.L1 including the chimeric (c)BR96-light chain (SEQ ID NO. 11).
Figure 3 is a schematic diagram of a plasmid designated pD16hJl.L1 including the human (h)BR96-light chain (SEQ ID NO. 13).
Figure 4 is a schematic diagram of a piasmid, designated pDl7-hJml4-dCH2.HI, of hBR96-2A human mutant BR96 having the HI, H2, and H3 mutations and the CH 2 deletion (PCT Application No. 95/305444, published March 6, 1996)).
Figure 5 is a schematic diagram of a plasmid. designated pDl7-J-dCH2.I-I, of cBR96-A (SEQ ID NO. 10) chimeric BR96 having the CH 2 deletion (PCT 20 Application No. 95/305444, published March 6, 1996)).
Figure 6 is a schematic diagram of a plasmid, designated pD17-cJ.Hl. of cBR96.
Figure 7 is a line graph showing the results of an ELISA assay of hBR96-2A- Dox to Le y (closed diamond), hBR96-2A to Le y (96:0006A2 R/A)(closed square), hBR96-2A to Le y (96:0006B R/A)(closed triangle), and BR96-Dox to Le' Figure 8 is a line graph showing the results of an ELISA assay of(l) BR96-A-Dox 30 to Le (closed diamond), chiBR96 to Le y (closed square), cBR96-A to Le y (96:0003 RJA)(closed triangle), and cBR96-Dox to Le y Figures 9a-c are schematic diagrams showing the steps for deleting a CH 2 domain.
Figures 10a-c are schematic diagrams showing the construction of BR96 IgGI CH, domain point mutations.
Figure 1 1 is a schematic diagram showing the construction of the pNg1/14 vector.
Figure 12 is a schematic diagram showing the construction of pD7-hBR96-2.
Figure 13 is a schematic diagram showing the construction of pDI7-hJr.l4dCH2.H 1.
Figures 14A-J are the nucleic acid sequence of pDl7-cJ-dCH-2.HI, the plasmid shown in Figure S. chimeric BR96 having the CH, deletion.
Figure 15 is a line graph showing the results of an ELISA assay comparing whole chiBR96 and deleted CH, chiBR96 on Ley.
Figure 16 is a description of the seven structural alterations.
Figure 17 is a schematic diaeram of a lasmid desi2nated pD I 7-hG lb.
Figures 18 A-F are the nucleic acid sequence of pDl7-himi4.H1.
Figures 19 A-N are the nucleic acid sequence of pD 17-hGlb.
nfl..: Figure 20 is a line graph showing complement dependent ctIotoxicir:. In :he legend. the closed square is hBR96-l; closed diamond is hBR96-2B: closed crcLe is hBR96-2C; closed triangle is hBR96-2D; open square is hBR96-21H- open circle is hBR96-2A and open triangle is 2B8, anti-Pseudonomas aeruginosa flagella type b mAb negative control.
II
Figure 21 is a line graph showing antibody dependent cell-mediated cytotoxitv. In the legend, the closed square is hBR96-1; closed diamond is hBR96-2B; closed circle is hBR96-2C; closed triangle is hBR96-2D; open square is hBR96-2H; open circle is hBR96-2A and open triangle is 2B8, anti-Pseudonomas aeruginosa flagella type b monoclonal antibody (mAb), negative control.
Figure 22 is a line graph showing binding activity of hBR96-2 constant region mutants on LeY-HSA. In the legend, the solid diamond is hBR96-1; solid square is hBR96-2A (CH2 deletion); solid triangle is hBR96-2B (235, 237 mutations): open square is hBR96-2C (318, 320, 322 mutations); open circle is hBR96-2D (331 mutation); and open triangle is hBR96-2H (235, 237, 318, 320, 322, 331 mutations).
Figure 23 is a line graph showing binding activity of hBR96-2 constant region mutants on LNFPIII-BSA. LNFPIII is a lacto-N-fucopentasose, a Lewis X trisaccharide with an additional lactose spacer (V Labs, Covington, LA). In the .legend, the solid diamond is hBR96-1: solid square is hBR96-2A (CH2 deletion); solid triangli is hBR96-2B (235, 237 mutations); open square is hBR96-2C (318, 320. 322 mutations); open circle is hBR96-2D (331 mutation); and open triangle is 20 hBR96-2H (235. 237, 318, 320, 322, 331 mutations).
Figures 24A and 24B provide a strategy for introducing multiple mutations by RPCR. Diagram of he 1.4 kpb IgG heavw chain region showing the hinge CH, and CH 3 domains as boxed regions. Site-specific mutations to be introduced into
CH
2 positions L1, L2, and L3 are encoded by complementary sets of mutant PCR primers (Al and A2; B1 and B2; and Cl and C2). The asterisks indicate the number of amino acid changes introduced at each L position. The two PCR primers, Rs (Recombination -sense) and Ra (Recombination-antisense), flank the Eco-47- III restriction sites and mediate homologous recombination with vector ends. The 3' ends of the oligonucleotides are represented by arrowheads. A three-way homologous recombination event between fragments RsA2, AIRa and the linearized vector produces the L1 mutant IgG. Two distally located sets of mutations (LI and 1-2) are simultaneously; introduced by inresngte number of recombining PCP, produces as is shown in the four-way re-combination ofe RsA2, AIB2. BIRa w, ith vector.
Figure 25 is a sgei showving Eco-47-li1 restriction enidonuclease anal1ysis of DN.-s prepared from colonies generated by multiple PCR frapgment RPCR. Lane M: lkb ladder DNA marker (GIBCOiBR-L Life Science Technology). Lanes 1-12: Twve~ve randomly selected colonies resulting 1from quadruple homologous recombiniation events were used to prepare plasmid and digested wvith E:co47-1II. Clones 1. 6 1 0 and 9 contain the fully assembled 1 .4 krb insert.
Figure 26 provides the amino acid sequence for hLBR96-2 heavy-chain varible re~ion and the human IgG1 constant region.
Figuz re 2priesthe amino acid seau,cce or hSR96-2-A heavy-%-chain varIble reaion)r and the huma,'- 12G: constant reegion -vnich the C-.2 region has bCeen deleted.
Fig-urez 23 provide-,s the amino acid sequence for c"1i BR96 heavy'-ai-n van~abie re2ion and the human lri conszant re:-c ,w.ithout ZheCH dman DETAILED DESCRIPTION OF THET IN-VEN-TON a.....DEFINITIONS *As used herein the term 'inh-ibiting immunoglobulin-induced toxicity" me-ars to reduce or allev-iate symnptoms geeal;associated wvith toxicirv causec imamunoqlobulin or [sg fusion protein therapy, toxicity, mediated by elTtctor .:functions of the Flc receptor. For exam, pie. BR96 anti'body recognizes and binds ,0 BR96 antiaen wh-ich is found at some levels in the gastrointestinal tract and at elevated levels in tumors (as compared to the gastrointestinal tract of normal tissues). The binding of BR96 antibody to BR96 antigen in vivo causes symptoms associated with gastrointestinal toxicity. These symptoms include rapid onset of vomiting, often with blood, and nausea. In humans the bleeding is limited to the fundus of the stomach, causing erosion of the superficial mucosa of the stomach.
The pathology of the wound is limited and resolves. However, the extreme nature of the nausea and vomiting, unrelieved by anti-emetics, defines it as the dose-limiting toxicity. For highly elevated levels of other antigens found in the central nervous system (CNS), liver, and other locations, the toxicity will be characterized by symptoms other than those described above.
As used herein the term "immunoglobulin molecule" can be produced by B cells or be generated through recombinant engineering or chemical synthetic means.
Examples of immunoglobulin molecules include antibodies, polyclonal and monoclonai antibodies, chimeric or humanized, and recombinant Ig. containing binding proteins, Ig fusion proteins. Recombinant Ig containing binding proteins include cell surface proteins, CD antigens (in one embodiment, CTLA4), to which an Ig tail is joined.
As used herein the terms "structurally altered" or "structural alteration" means manipulating the constant region so that the resulting molecule or protein exhibits a diminished ability to induce toxicity. Structural alteration can be by chemical modification. proteolytic alteration, or by recombinant genetic means. Recombinant genetic means may include, but is not limited to, the deletion, insertion and substitution of amino acid moieties.
As used herein the terms "multiple toxicity associated domains" means more than one discrete toxicity associated domain. As there appear to be at least two toxicity associated domains in the immunoglobulin molecule, one roughly localized to amino acids 231-238 and another roughly localized to amino acids 310-331, an example of the structural alteration of multiple toxicity associated domains comprises the insertion, substitution or deletion of amino acid residues in both of these domains.
This definition excludes structural alterations targeting a single toxicity associated domain.
Merely by way of example, the constant region of the immunoglobulin molecule can be structurally altered so that the molecule no longer mediates a CDC or ADCC response. However, the methods of the invention encompasses the use of structurally altered immunoglobulin molecules regardless of whether it mediates a CDC or ADCC response. The underlying requirement is that the altered molecule must inhibit immunoglobulin-induced toxicity.
Structural alteration can be effected in a number of ways. For example, structural alteration can be effected by deletion of the entire constant region.
Alternatively, structural alteration can be effected by deletion of the entire CH 2 domain of the constant region. In this instance, deletion of the entire CH2 domain nay render the molecule unable to bind an Fc receptor thereby eliminating the molecule's possibility of mediating antibody-dependent cellular cytotoxicity (ADCC), bind Clq, or activate complement.
Alternatively, structural alteration can be effected by deletion of only that portion of 20 the CH 2 domain that binds the Fc receptor or complement.
Further alternatively, a single mutation or multiple mutations such as substitutions and insertions in the CH 2 domain can be made. The underlying requirement of any mutation is that it must inhibit, diminish, or block immunoglobulin-induced toxicity. For example, this can be achieved by mutating the constant region such that the altered molecule is rendered unable to mediate a CDC response or an ADCC response, or to activate complement.
Alternatively, structural alteration can be effected by isotype switching (also known as class switching) so that the altered molecule does not induce toxicity in the subject. In one embodiment, the constant region of the immunoglobulin is structurally altered so that it no longer binds the Fc receptor or a complement component, switching a molecule's original IgG isotype from IgG to IgG4.
Isotype switching can be effected regardless of species, an isotype from a nonhuman being can be switched with an isotype from a human being Finkelman et al. (1990) Annu. Rev. Immunol. 8:303-333; T. Honjo et al. (1979) Cell 18: 559- 568; T. Honjo et al. In "Immunoglobulin Genes" pp. 124-149 Academic Press, London)).
As used herein the term "Ig fusion protein" means any recombinantly produced antigen or ligand binding domain having a constant region which can be structurally altered.
As used herein "cytotoxic agent" includes antimetabolites, alkylating agents, anthracyclines, antibiotics, anti-mitotic agents, and chemotherapeutic agents.
Specific examples within these groups include but are not limited to ricin, doxorubicin, daunorubicin, taxol, ethidium bromide, mitomycin, etoposide, tenoposide. vincristine, vinblastine, colchicine, supporin, gelonin, PE40, brvodin, dihydroxy anthracin dione, actinomycin D, and 1-dehydrotestosterone.
As used herein the term "BR96" refers to the whole BR96 monocional antibody 20 disclosed in PCT No. 95/305444, published March 6. 1996, chimeric BR96 monoclonai antibody disclosed in PCT No. 95/305444, published March 6, 1996, or BR96 mutant molecules disclosed in PCT No. 95/305444, published March 6, 1996.
As used herein, "treating" means to provide tumor regression so that the tumor is not palpable for a period of time (standard tumor measurement procedures may be followed Miller et al. "Reporting results of cancer treatment" Cancer 47:207- 214 (1981)); stabilize the disease; or provide any clinically beneficial effects.
As used herein, an "effective amount" is an amount of the antibody, immunoconjugate, or recombinant molecule which kills cells or inhibits the proliferation thereof.
As used herein, "administering" means oral administration, administration as a suppository, topical contact, intravenous, intraperitoneal. intramuscular or subcutaneous administration, or the implantation of a slow-release device such as a miniosmotic pump, to the subject.
As used herein, "pharmaceutically acceptable carrier" includes any material which when combined with the antibody retains the antibody's specificity or efficacy and is non-reactive with the subject's immune system. Examples include, but are not limited to, any of the standard pharmaceutical carriers such as a phosphate buffered saline solution, water, emulsions such as oil/water emulsion, and various types of wetting agents. Other carriers may also include sterile solutions, tablets including coated tablets and capsules.
Typically such carriers contain excipients such as starch, milk, sugar, certain types of clay, gelatin, stearic acid or salts thereof, magnesium or calcium stearate, talc, vegetable fats or oils, gums, glycols, or other known excipients. Such carriers may also include flavor and color additives or other ingredients. Compositions comprising such carriers are formulated by well known conventional methods.
As" used herein, "mutation" means a single amino acid or nucleic acid mutation or multiple mutations by whatever means, homologous recombination, error prone PCR, or site directed mutagenesis.
In order that the invention herein described may be more fully understood, the following descnption is set forth.
METHODS OF THE PRESENT INVENTION The present invention provides a method for inhibiting immunoglobulin-induced toxicity resulting from the use of immunoglobulin during therapy or in vivo diagnosis. For example, the methods of the invention would be useful to minimize the toxicity associated with prolonged clinical exposure to immunoglobulin use during or after tumor imaging with radiolabeled antibodies.
In accordance with the practice of this invention, the subject includes, but is not limited to, human, equine, porcine, bovine, murine, canine, feline, and avian subjects. Other warm blooded animals are also included in this invention.
This method comprises administering an immunoglobulin molecule to the subject.
The immunoglobulin can be IgG, IgM, or IgA. IgG is preferred.
In one embodiment of the invention, the immunoglobulin molecule recognizes and binds Le'. In another embodiment, the immunoglobulin recognizes and binds Lex.
In a further embodiment, the immunoglobulin is a monoclonal antibody BR96 produced by the hybridoma deposited on February 22, 1989 with the American Type Culture Collection (ATCC), 12301 Parklawn Drive, Rockville, MD 20852 and accorded ATCC Accession No.: HB 10036. in vet another embodiment, the immunoglobulin is a chimeric antibody ChiBR96 produced by the hybridoma deposited on May 23, 1990, with the ATCC, 12301 Parklawn Drive, Rockville, MD 20852 and accorded ATCC Accession No.: HB 10460.
In accordance with the practice of the invention, the immunoglobulin can be a bispecific antibody with a binding specificity for two different antigens, one of the antigens being that with which the monoclonal antibody BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC binds. Also, in accordance with the practice of the invention, the immunoglobulin can be an anti-idiotypic antibody.
As required by the invention, at least a portion of the constant region of the immunoglobulin molecule is structurally altered. Structural alteration can be effected by a number of means. In one embodiment, the entire constant region, i.e., CHI, CH 2 and CH3 domains, can be deleted.
In another embodiment, only the CH 2 domain is deleted from the immunoglobulin molecule cBR96-A (Figure hBR96-2A (Figure In this embodiment, the CH 2 deletion may result in a molecule unable to bind the Fc receptor or a complement component.
In another embodiment, only that portion of the CH 2 domain which binds the complement component Clq is deleted. In yet another embodiment, mutations in specific portions of the CH 2 domain are made. For example, the inununoglobulin molecule may be modified by structurally altering multiple toxicity associated domains in the constant region so that immunoglobulin-induced toxicity is inhibited. A discussion of such mutations are further found hereinafter.
Regardless of the means, the underlying requirement for any structural alteration of the constant region is that immunoglobulin-induced toxicity is substantially reduced or inhibited. In one embodiment, immunoglobulin-induced toxicity is inhibited by structurally altering the constant region such that the molecule's ability to mediate a CDC response or ADCC response and/or activate the complement cascade is prevented or inhibited. Methods for determining whether the molecule is able to inhibit a CDC response are well known, one method involves a 20 test Garrigues et al. Int. J. Cancer 29:511 (1982); I. Hellstrom et al. PNAS 82:1499 (1985)). Methods for determining whether the molecule is able to inhibit an ADCC response are well known Hellstrom et al. PNAS 82:1499 (1985)).
Methods for determining whether the molecule is able to activate a complement cascade are well known.
In another embodiment of the invention, the method comprises administering to the subject an Ig fusion protein having a structurally altered constant region. Structural alteration of the constant region may include deletion of the entire C region or portions thereof, alteration of the CH 2 domain so that the altered molecule no longer binds the Fc receptor or a complement component.
The invention further provides a method for inhibiting immunoglobulin-induced toxicity resulting from immunotherapy in a subject. The method comprises administering to the subject an antibody which has been modified so that at least a portion of the constant region has been structurally altered as discussed supra. In one embodiment, the antibody recognizes and binds Le'. In another embodiment, the antibody recognizes and binds to Le In accordance with the practice of this invention, the antibody can be monoclonal antibody BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC. Alternatively, the antibody can be chimeric antibody ChiBR96 produced by the hybridoma having the identifying characteristics of HB 10460 as deposited with the ATCC. Further, the antibody can be a bispecific antibody with a binding specificity for two different antigens, one of the antigens being that with which the monoclonal antibody BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with-the ATCC binds.
Additionally, the present invention provides a method for inhibiting immunoglobulin-induced toxicity resulting from immunotherapy for a disease in a subject. The disease will vary with the antigen sought to be bound. Examples of 20 diseases include but are not limited to immunological diseases, cancer, cardiovascular diseases, neurological diseases, dermatological diseases or kidney disease.
This method comprises the following steps. Step one provides selecting an antibody for a target. Generally, the target is associated with the disease and the antibody directed to the target is known. For example, the target can be the BR96 antigen and the antibody selected is BR96.
Step two of this method provides structurally altering the constant region of the antibody so selected so that immunoglobulin induced toxicity is inhibited.
Inactivation can include any of the means discussed above. For example, inactivation can be effected by structurally altering multiple toxicity associated domains in the CH, domain of the constant region of the Ig protein so selected.
Step three of this method provides administering the structurally altered antibody of step two to the subject under conditions that the structurally altered antibody recognizes and binds the target and that such binding directly or indirectly alleviates symptoms associated with the disease.
In accordance with the invention, in one embodiment step one provides selecting an Ig fusion protein for a target. Further, the method provides mutating the Ig fusion protein so selected by structurally altering the CH 2 domain of the constant region of the Ig protein by the same means discussed above.
The invention further provides methods to treat human carcinoma. For example, the immunoglobulin. antibody, or Ig fusion protein discussed above can be used in combination with standard or conventional treatment methods such as chemotherapy, radiation therapy or can be conjugated or linked to a therapeutic drug, or toxin, as well as to a lymphokine or a tumor-inhibitory growth factor, for delivery of the therapeutic agent to the site of the carcinoma.
0000 oooo 20 Techniques for conjugating therapeutic agents to immunoglobulins are well knovn (see, Arnon et al.. "Monoclonal Antibodies For Immunotargeting Of Drugs In Cancer Therapy", in Monoclona! Antibodies And Cancer Therapy, Reisfeld et al.
pp. 243-56 (Alan R. Liss, Inc. 1985); Hellstr6m et al., "Antibodies For Drug Delivery", in Controlled Drug Delivery (2nd Robinson et al. pp. 623-53 25 (Marcel Dekker, Inc. 1987); Thorpe, "Antibody Carriers Of Cytotoxic Agents In Cancer Therapy: A Review", in Monoclonal Antibodies '84: Biological And Clinical Applications, Pinchera et al. pp. 475-506 (1985); and Thorpe et al., "The Preparation And Cytotoxic Properties Of Antibody-Toxin Conjugates", Immunol.
Rev., 62:119-58 (1982)).
Alternatively, the structurally altered antibody or Ig fusion protein can be coupled to high-energy radiative agents, a radioisotope such as 131I; which, when localized at the tumor site, results in a killing of several cell diameters (see, Order, "Analysis, Results, And Future Prospective Of The Therapeutic Use Of Radiolabeled Antibody In Cancer Therapy", in Monoclonal Antibodies For Cancer Detection And Therapy, Baldwin et al. pp. 303-16 (Academic Press 1985)).
According to yet another embodiment, the structurally altered BR96 antibody can be conjugated to a second antibody to form an antibody heteroconjugate for the treatment of tumor cells as described by Segal in United States Patent 4,676,980.
Still other therapeutic applications for the structurally altered antibody or Ig fusion protein of the invention include conjugation or linkage, by recombinant DNA techniques or protein chemical techniques, to an enzyme capable of converting a prodrug into a cytotoxic drug and the use of that antibody-enzyme conjugate in combination with the prodrug to convert the prodrug to a cytotoxic agent at the tumor site (see, Senter et al., "Anti-Tumor Effects Of Antibody-alkaline Phosphatase", Proc. Natl. Acad. Sci. USA, 85:4842-46 (1988); "Enhancement of the in vitro and in viv Antitumor Activities of Phosphorylated Mitomycin C and Etoposide Derivatives by Monoclonai Antibody-Alkaline Phosphatase Conjugates", Cancer Research 49:5789-5792 (1989); and Senter. "Activation of Prodrugs by Antibody-Enzyme Conjugates: A New Approach to Cancer Therapy," FASEB J.
20 4:188-193 (1990)).
It is apparent therefore that the present invention encompasses pharmaceutical compositions including immunoglobulin molecules, antibodies, and Ig fusion proteins all having structurally altered CH 2 domains, and their use in methods for treating human carcinomas. For example, the invention includes pharmaceutical compositions for use in the treatment of human carcinomas comprising a pharmaceutically effective amount of a structurally altered BR96 and a pharmaceutically acceptable carrier.
30 The compositions may contain the structurally altered antibody or Ig fusion protein or antibody fragments, either unmodified, conjugated to a therapeutic agent drug, toxin, enzyme or second antibody). The compositions may additionally include c other antibodies or conjugates for treating carcinomas an antibody cocktail).
The compositions of the invention can be administered using conventional modes of administration including, but not limited to, intrathecal, intravenous, intraperitoneal, oral. intralymphatic or administration directly into the tumor. Intravenous administration is preferred.
The composition of the invention can be in a variety of dosage forms which include, but are not limited to, liquid solutions or suspensions, tablets, pills, powders, suppositories, polymeric microcapsules or microvesicles, liposomes, and injectable or infusible solutions. The preferred form depends upon the mode of administration and the therapeutic application.
The compositions of the invention also preferably include conventional pharmaceutically acceptable carriers and adjuvants known in the art such as human serum albumin, ion exchangers, alumina, lecithin, buffer substances such as phosphates, glycine, sorbic acid, potassium sorbate, and salts or electrolytes such as protarine sulfate.
20 in accordance with the practice of the invention, the pharmaceutical carrier can be a lipid carrier. The lipid carrier can be a phospholipid. Further, the lipid carrer can be a fatty acid. Also, the lipid carrier can be a detergent. As used herein, a detergent is any substance that alters the surface tension of a liquid, generally lowering it.
In one example of the invention, the detergent can be a nonionic detergent.
Examples of nonionic detergents include, but are not limited to, polysorbate 80 (also known as Tween® 80 or (polyoxyethylenesorbitan monooleate), Brij®, and Triton® (for example Triton® WR-1339 and Triton® 30 Alternatively, the detergent can be an ionic detergent. An example of an ionic detergent includes, but is not limited to, alkyltrimethylammonium bromide.
Additionally, in accordance with the invention, the lipid carrier can be a liposome.
As used in this application, a "liposome" is any membrane bound vesicle which contains any molecules of the invention or combinations thereof.
The most effective mode of administration and dosage regimen for the compositions of this invention depends upon the severity and course of the disease, the patient's health and response to treatment and the judgment of the treating physician.
The interrelationship of dosages for animals of various sizes and species and humans based on mg/m 2 of surface area is described by Freireich, et al. Cancer Chemother., Rep. 50 219-244 (1966). Adjustments in the dosage regimen can be made to optimize the tumor cell growth inhibiting and killing response, e.g., doses can be divided and administered on a daily basis or the dose reduced proportionally depending upon the situation several divided doses can be administered daily or proportionally reduced depending on the specific therapeutic situation).
THE MOLECULES OF THE INVENTION The present invention provides structurally altered BR96 or BR96 Ig ifsion proteins.
Structurally altered BR96 antibodies or Ig fusion proteins have the variable region of BR96 and a modified constant region. This modification provides structurally altered BR96 antibodies or Ig fusion proteins with the ability to inhibit immunoglobulin-induced toxicity.
Various embodiments of structurally altered BR96 or BR96 Ig fusion proteins have been made.
In one embodiment, designated cBR96-A, the entire CH 2 domain of cBR96 was 30 deleted. CBR96-A is expressed by the plasmid having the sequence shown in SEQ.
ID. NO. 10. cBR96 is expressed by a plasmid having the sequence in SEQ ID NO.
9.
In another embodiment, designated hBR96-2A, the entire CH 2 domain of hBR96 was deleted. hBR96-A is expressed by the plasmid having the sequence shown in SEQ. ID. NO. 12. hBR96 is a mutant BR96 having the HI, H2, and H3 mutations described in PCT Application No. 95/305444, published March 6, 1996.
In yet another embodiment, designated hBR96-2B, the leucine residue located at amino acid position 235 is mutated to alanine. Additionally, the glycine residue located at amino acid position 237 is mutated to alanine. The amino acid position numbering used is described in Kabat et al. Sequences of Proteins of Immunological Interest 5th Edition (1991) United States Department of Health and Human Services.
In a further embodiment, designated hBR96-2C, the glutamic acid residue at position 318 is mutated to serine; the lysine residue located at position 320 is mutated to serine; and the lysine residue located at position 322 is mutated to serine using standard protocols (Alexander R. Duncan and Greg Winter "The binding site for Clq on IgG" Nature 332:738 (1988)).
In another embodiment, designated hBR96-2D, the proline residue at position 331 is mutated to alanine Tao et al., "Structural features of human immunoglobulin G that determine isotype-specific differences in complement activation" J. Exp.
Med. 178:661-667 (1993); Y. Xu et al., "Residue at position 331 in the IgG1 and IgG4 domains contributes to their differential ability to bind and activate complement" J. Biol. Chem. 269:3469-3474 (1994)).
In an additional embodiment, designated hBR96-2E, the leucine residue at position 235 is mutated to alanine; the glycine residue located at position 237 is mutated to alanine; the glutamic acid residue located at position 318 is mutated to serine; the lysine residue located at position 320 is mutated to serine; and the lysine residue located at position 322 is mutated to serine Morgan et al., "The N-terminal end of the CH 2 domain of chimeric human IgGI anti-HLA-DR is necessary for Clq, Fc(gamma)RI and Fc(gamma)RIII binding" Immunol. 86:319-324 (1995)).
In yet a further embodiment, designated hBR96-2F, the leucine residue located at position 235 is mutated to alanine; the glycine residue located at position 237 is mutated to alanine; and the proline residue located at position 331 is mutated to alanine.
In yet another embodiment, designated hBR96-2G, the giutamic acid residue located at position 318 is mutated to serine; the lysine residue located at position 320 is mutated to serine; the lysine residue located at position 322 is mutated to serine; and the proline residue located at position 331 is mutated to alanine.
In another embodiment, designated hBR96-2H, the leucine residue located at position 235 is mutated to alanine; the glycine residue located at position 237 is mutated to alanine; the glutamic acid residue at position 318 is mutated to serine; the lysine residue located at position 320 is mutated to serine; the lysine residue located at position 322 is mutated to serine: and the proline residue located at position 331 is mutated to alanine.
Depending on its form. a structurally altered BR96 antibody or fusion protein can be a monofunctional antibody, such as a monoclonal antibody, or bifunctional antibody, such as a bispecific antibody or a heteroantibody. The uses of structurally altered BR96, as a therapeutis or diagnostic agent, will determine the different forms of structurally altered BR96 which is made.
Several options exists for antibody expression. Immunoexpression libraries can be combined with transfectoma technology, the genes for the Fab molecules derived from the immunoglobulin gene expression library can be connected to the S"desired constant-domain exons. These recombinant genes can then be transfected and expressed in a transfectoma that would secrete an antibody molecule.
Once produced, the polypeptides of the invention can be modified, by amino acid modifications within the molecule, so as to produce derivative molecules. Such derivative molecules would retain the functional property of the polypeptide, namely, the molecule having such substitutions will still permit the binding of the polypeptide to the BR96 antigen or portions thereof.
It is a well-established principle of protein chemistry that certain amino acid substitutions, entitled "conservative amino acid substitutions," can frequently be made in a protein without altering either the conformation or the function of the protein.
Amino acid substitutions include, but are not necessarily limited to, amino acid substitutions known in the art as "conservative".
Such changes include substituting any of isoleucine valine and leucine (L) for any other of these hydrophobic amino acids; aspartic acid for glutamic acid and vice versa: glutamine for asparagine and vice versa: and serine (S) for threonine and vice versa.
Other substitutions can also be considered conservative, depending on the environment of the particular amino acid and its role in the three-dimensional structure of the protein. For example, glycine and alanine can frequently be interchangeable, as can alarine and valine Methionine which is relatively hydrophobic, can frequently be interchanged with leucine and isoleucine, and sometimes with valine. Lysine and arginine (R) 25 are frequently interchangeable in locations in which the significant feature of the amino acid residue is its charge and the differing pK's of these two amino acid residues are not significant. Still other changes can be considered "conservative" in particular environments.
30 In one embodiment of the present invention, the polypeptide is substantially pure, free of other amino acid residues which would inhibit or diminish binding of the polypeptide to its target and would inhibit or reduce gastrointestinal toxicity which are normally exhibited during or after antibody therapy.
NUCLEIC ACID MOLECULES ENCODING THE PRESENT INVENTION The nucleotide sequences and the amino acid sequences of the variable and constant regions of BR96 are known. The sequence for the immunoglobulin constant region is known and provided in Figure 18. Specific mutations in the constant region of the BR96 antibody were made. Nucleic acid molecules encoding the seven mutants described above (hBR96-2B through hBR96-2H) are as follows.
In hBR96-2B, alanine at amino acid positions 235 and 237 is encoded by codons GCU, GCC, GCA, or GCG.
In hBR96-2C, serine at positions 318, 320, and 322 is encoded by UCU. UCC, UCA. orUGG.
In hBR96-2D, alanine at position 331 is encoded by codons GCU, GCC, GCA, or
GCG.
in hBR96-2E, alanine at positions 235 and 237 is encoded by codons GCU, GCC, GCA, or GCG. Serine at positions 318, 320, and 322 is encoded by UCU, UCC, UCA, or UGG.
In hBR96-2F, alanine at positions 235, 237, and 331 is encoded by codons GCU, 25 GCC, GCA, or GCG.
In hBR96-2G, serine at positions 318, 320, 322 is encoded by UCU, UCC, UCA, or UGG. Further, the alanine at position 331 is encoded by codons GCU, GCC, GCA, or GCG.
In hBR96-2H, alanine at positions 235, 237, and 331 is encoded by codons GCU, GCC, GCA, or GCG. Additionally, serine at positions 318, 320, 322 is encoded by UCU, UCC, UCA, or UGG.
Any of the above can be deoxyribonucleic acid (DNA), complementary DNA (cDNA). or ribonucleic acid (RNA).
IMMUNOCONJUGATES
Immunoconjugates (having whole antibody or Ig fusion proteins) may be constructed using a wide variety of chemotherapeutic agents such as folic acid and anthracyclines (Peterson et al., "Transport And Storage Of Anthracyclines In Experimental Systems And Human Leukemia", in Anthracycline Antibiotics In Cancer Therapy, Muggia et al. p. 132 (Martinus Nijhoff Publishers (1982); Smyth et al., "Specific Targeting of Chlorambucil to Tumors With the Use of Monoclonal Antibodies", J. Natl. Cancer Inst., 76:503-510 (1986)). including doxorubicin (DOX) (Yang and Reisfeld "Doxorubicin Conjugated with a Monoclonal Antibody Directed to a Human Melanoma-Associated Proteoglycan Suppresses Growth of Established Tumor xenografts in Nude Mice PNAS (USA)" 85:1189-1193 (1988)), Daunomycin (Arnon and Sela "In Vitro and in vivo Efficacy of Conjugates of Daunomycin With Anti-Tumor Antibodies" Immunol. Rev., 65:5- 27 (1982)), and morholinodoxorubicin (Mueller et al., "Antibody Conjugates With Morpholinodcxorubicin and Acid-Cleavabie Linkers", Bioconjugate Chem., 1:325- 330 (1990)).
BR96 has been conjugated to doxorubicin and has been shown to be effective in 25 therapy of certain cancers or carcinomas (Trail, Willner, Lasch, S.J., Henderson, Casazza, Firestone, Hellstrom, and Hellstrom, K.E.
Cure of xenografted human carcinomas by BR96-doxorubicin immunoconjugates.
Science, 261:212-215, 1993).
30 In accordance with the practice of the invention, structurally altered BR96 can be used in forms including unreduced IgG, reduced structurally altered IgG, and fusion proteins (PCT Application No. 95/305444, published March 6, 1996).
Suitable therapeutic agents for use in making the immunoconjugate includes Pseudomonas exotoxin A (PE) in either the native PE or LysPE40 form. LysPE40 is a truncated form containing a genetically modified amino terminus that includes a lysine residue for conjugation purposes. Doxorubicin is also a suitable therapeutic agent.
Additional examples of therapeutic agents include, but are not limited to.
antimetabolites, alkylating agents, anthracyclines, antibiotics, and anti-mitotic agents.
Antimetaboiites include methotrexate, 6-mercaptopurine, 6-thioguanine, cytarabine, decarbazine.
Alkylating agents include mechlorethamine, thiotepa chlorambucil, melphalan, car-mustine (BSNU) and tomustine (CCNU), cvclothosphamide, busulfan, dibromomannitol, streptozotocin, mitomycin C. and cis-dichlorodiamine platinum (II) (DDP) cisplatin.
Anthracyciines include daunonibicin (formerly daunomycin) and doxorubicin (also referred to herein as adriamycin). Additional examples include mitozantrone and bisantrene.
Antibiotics include dactinomycin (formerly actinomycin), bleomycin. mithramyvcin, and anthramycin
(AMC).
Antimitotic agents include vincristine and vinblastine (which are commonly referred to as vinca alkaloids).
30 Other cytotoxic agents include procarbazine, hydroxyurea, asparaginase, corticosteroids, mytotane interferons.
Further examples of cytotoxic agents include, but are not limited to, ricin, bryodin, gelonin, supporin, doxorubicin, taxol, cytochalasin B, gramicidin D, ethidium bromide, etoposide, tenoposide, colchicine, dihydroxy anthracin dione, 1dehydrotestosterone, and glucocorticoid.
Clearly analogs and homologs of such therapeutic and cytotoxic agents are encompassed by the present invention. For example, the chemotherapuetic agent aminopterin has a correlative improved analog namely methotrexate.
Further, the improved analog of doxorubicin is an Fe-chelate. Also, the improved analog for 1-methylnitrosourea is lomustine. Further, the improved analog of vinblastine is vincristine. Also, the improved analog of mechlorethamine is cyclophosphamide.
METHODS FOR MAKING MOLECULES OF THE INVENTION There are multiple approaches to making site specific mutations in the CH 2 domain of an immunoglobulin molecule. One approach entails PCR amplification of the CH2 domain with the mutations followed by homologous recombination of the 20 mutated CH 2 into the vector containing the desired irmmunoglobulin, hBR96-2.
For examnie, hBR96-2B and hBR96-2D have been made by this method.
Another approach would be to introduce mutations by site-directed mutagenesis of single-stranded DNA. For example, vector pD17-hGlb, which contains only the 25 constant region of IgGl and not the V domain of hBR96, has the fl origin of replication. This gives the vector the properties of a phagemid and site-directed mutagenesis experiments can be performed according to the methods of Kunkel, et al. (Kunkel, J.D. Roberts, and R.A. Zakour, 1987 Methods Enzymol. 154:367- 383) as provided in the Bio-Rad Muta-Gene® phagemid in vitro mutagenesis kit, 30 version 2. For example, hBR96-2B, and -H were made by this method.
In order that the invention described herein may be more fully understood, the following examples are set forth. It should be understood that these examples are for illustrative purposes only and arc not to be construed as limiting the scope of this invention in any manner.
EXAMPLE 1 The following standard ELISA protocol was used.
Materials: Immulon2 96 well plates and Genetic Systems Specimen Diluent Concentrate (10x); antibody conjugate was Goat Anti Human Kappa-HRP Mouse Adsorbed, Southern Biotech. at 1:10,000 in Genetic Systems Conjugate Diluent Genetic Systems EIA Chromogen Reagent (TMB) (1:100); Genetic Systems EIA Buffered Substrate primary antibody or antigen were AffiniPure F(ab')2 Fragment Goat A.nti Human IgG Fc Fragment specific (Jackson Imununo Research), Goat Anti Human Kappa-UNLB (Southern Biotechnoiogy Associates), Le-HSA (Alberta Research Council).
Methods: Dilute primary antibody or antigen to 1.0 g/m! in 0.05M Carb/Bicarb 20 buffer. Add 100pl of the diluted solution per well in immulon 2 plates. Seal plates :and incubate O.N. at 4 0
C.
Block plates by flicking them and blotting on paper towels. Add 200ul'well of Genetic Systems, Specimen Diluent Concentrate Incubate at least 1 hour at room temperature and then dump the contents of the plates. Wash the plates 3x in saline/Tween. Blot to dry. Allow the plates to dry at R.T. (45 min. to 1 hour). Seal and store the plates at 4°C.
Test samples as follows. Dilute samples and standards in Specimen Diluent at 1:10.
30 Perform serial dilutions in separate round bottom plates. Transfer 100ul/well of final dilutions to antigen coated assay plates; then incubate O.N. at 4°C. Wash plates 3x with saline/Tween.
For conjugation add 100 pl/well of antibody-HRP conjugate in Genetic Systems Conjugate Diluent Incubate plates at Rcom Temp. for 60 min. Wash plates 3x in saline/Tween.
Add 100 pl/well of Genetic Systems EIA Chromogen Reagent (TMB) 1:100 in EIA Buffered Substrate Incubate at R.T. for 15 min. and stop with IN H 2
SO
4 100 .l/well. Read plate at 4 5 0/630nm in EIA plate reader.
EXAMPLE 2 Construction of CH 2 deleted BR96 molecules Strategy for Deleting CH- Domains: To construct CH 2 deleted BR96 molecules, the hinge, CH 2 and CH 3 domains were removed from chimeric BR96 and humanized BR9696-2 IgGI molecules by an Eco47-III restriction digestion in non-coding regions. The hinge and CH 3 domains were amplified by polymerase chain reaction (PCR) from a human IgGI (pNyl.14) molecule lacking the C-I 2 domain. Two oligonucleotides (Sense 49mer, Antisense 50mer) homologous to the sequences of S 20 IgG1 constant region at both sides preserving E.co47--III sites were synthesized.
The amplified hinge and CH 3 domain PCR fragments were added into Eco47-III sites on BR96 IgGI molecules by in vivo homologous recombination Bubeck et al., Nucleic Acid Research (1993) 21:3601-3602). The new BR96 IgGI molecules were verified by restriction mapping and sequencing.
A sewing PCR strategy was used for the construction of CH 2 deleted human igG1 (pNy l.14) (Robert M. Horton, et al. (1990) Biotech 8 528).
The CHI domain was amplified as a 580 bp fragment with a sense oligonucleotide 30 TGG CAC CGA AAG CTT TCT GGG GCA GGC CAG GCC TGA (primer A) and an antisense oligonucleotide TCC GAG CAT GTT GGT ACC CAC GTG GTG GTC GAC GCT GAG CCT GGC TTC GAG CAG ACA (primer B) from a linearized human IgGI constant region vector (pNy The PCR fragment extends from the 5' end of the Hind-III site (in bold) through the Cel-II, Sal-I, Dra- III, Kpn-I, 6 bp nucleotide spacer and Mro-I sites (in bo!d) at the 3' end of the CHI domain.
The CH 3 domain was then partially amplified (to the Xba-I site) with a sense primer GTC GAC CAC CAC GTG GGT ACC AAC ATG TCC GGA GCC ACA TGG ACA GAG GCC GGC T (primer C) and an antisense primer CTG GTT CTT GTT CAT CTC CTC TCT AGA TGG (primer D) from a linearized human IgG1 constant region vector (pNy1.7). A PCR fragment (about 150 bp) with Sal-I, Dra-III, Kpn-1, 6 nucleotide spacer and Mro-I sites (in bold) on its 5' end, extends only through the Xba-1 site (in bold) within the CH 3 domain.
The CHI and CH- partial PCR fragments were combined in a PCR without any primer. The reaction was run through two full cycles of denaruration and reannealing to allow the fragments to combine at the homologous region at the 3' ends. Primers A and D (described above) were added to the reaction and the PCR cycle was completed. The po!ymerase extends the DNA with primer A and primer D, yielding a full- length (660 bp) PCR fragment. The newly extended PCR 20 fragment is arranged from the 5' end to the 3' end in the foilowing order: Hind-III CHI Cel-II Sal-! Dra-III Kpn-I 6 bp spacer Mro-I CHI partial Xba-1.
The combined PCR fragment, with the CHI and partial CH 3 domains, was then 25 cloned by a blunt end ligation into a Sma-I site on a pEMBL18 vector and the sequence was confirmed by dideoxy sequencing (Sanger et al. (1977) PNAS (USA) 74:5463-5466).
To transfer the CHI and partial CH 3 into a mammalian expression vector, both the pEMBL18 and pN1y.7 vectors were digested with Hind-III and Xba-I. The Hind- III and Xba-I fragment was ligated into the same sites on a linearized pNy1.7 vector.
The new construct. with CHI and a full CH3 domain, was designated the vector.
The hinge fragment was amplified from a Hind-III digested pNyl.7 vec:or with the primers designed to flank the hinge exon with a Sal-I and a Dra-llI cloning site at each end. These sites also exist between the CH and CH 3 domains of the pNy 1.10 construct. The sense oligonucleotide ACC ATG GTC GAC CTC AGA CCT GCC AAG AGC CAT ATC with a 6 bp spacer and a Sal-I cloning site (in bold) and the antisense oligonucleotide CAT GGT CAC GTG GTG TGT CCC TGG ATG CAG GCT ACT CTA G with a 6 bp spacer and a Dra-III cloning site (in bold) were used for the amplication of the hinge fragment (250 bp).
The hinge region PCR fragment was cloned into a Sma-I site on pEMBL 18 by blunt end ligation. Both the pEMBL 18 with the hinge domain and the pNy 1.10 with the
CH
2 and CH 3 domains were digested with Sal-1 and Dra-III. The digested hinge fragment was cloned into the Sal-1 and Dra-IIl linearized sites on the vector. The new construct, now carrying the CHI, hinge and CH 3 domains, was designated pN 1.11.
To make the final CH 2 deleted human igG1 construct, both the pNyi.11 construct 20 and pNl 1.11 vector were digested with BamH1 and HindIII. A fragment containing the CHI, hinge and CH 3 domains was cloned into the linearized pNy1l.11 vector.
The new constant region IgG1 construct lacks the CH 2 domain and is designated pNyl.14 (Figure 11).
25 For digestion of BR96 IgG1 with Eco47-III, a restriction fragment with hinge, Cl-b and CH 3 domains was identified on the constant region sequence ofBR96 IgGI i vector in both chimeric and humanized molecules. The 5' end of this fragment lies inside the intron between CHI and hinge and the 3' end is located inside the CH 3 intron of the BR96 IgG1 molecule. The hinge, CH 2 and CH 3 domains (!.368 kb 30 fragment) were removed from BR96 IgG1 molecules by Eco47-III restriction digestion. The Eco47-III is a blunt end cutter. The BR96 IgG1 DNA digested with this enzyme does not require any pretreatment before cloning. Figure 12 is a diagrammatic representation of the pDI7-hBR96-2 vector showing the Eco47-III sites used in cloning.
The CH 2 deleted BR96 IgGI was then constructed as follows. The hinge and CH3 were amplified from a CH 2 deleted L6 IgG (pNy1.14) construct with a sense oligonucleotide
CAGGGAGGGAGGGTGTCTGCTGGAAGCCAGGCTCAGCGCTGACCTCAG
A homologous to the constant region sequence of IgGI at the 5' end of the Eco47-III site (in bold) and an antisense oligonucleotide CCCAGGGCAGCGCTGGGTGCTT homologous to the constant region sequence of IgG1 at the 3' end of the Eco47-III site (in bold). The Eco47-III site at the 3' end of the pNy 1.14 construct is modified in the cloning process. The Eco47- III site is thus introduced into an antisense primer and used in amplification of the hinge and CH 3 domains.
The pD17-BR96 IgGI vector was digested with Eco47-III and the hinge, CH 2 and CH3 domains were removed. The linearized pDI7-BR96 IgGI vector was mixed with equimolar amounts of hinge and CH 3 PCR fragments. Cotransformation of the 20 PCR fragment with linearized DNA into E.coli DH5a competent ceils resulted in a recombinant molecule, mediated by homologous recombination in bacteria. This construct lacks the CH2 domain of BR96 IgG1 molecules, and is designated pD17- BR96-dCH2 (Figure 13).
25 1.9 grams of CH 2 -deleted chimeric BR96 was obtained as raw material from 89L of culture supernatant.
EXAMPLE 3 30 Toxicity, localization and clearance of CH 2 -deleted chimeric BR96 was tested in vivo as follows.
Three dogs received 400 mg/m 2 of cBR96-A, the CH 2 deletion mutant of chimeric BR96, and two received chimeric BR96. Both molecules had been mildly reduced and alkylated. This is required to prevent dimerization of the deletion mutant into a tetravalent form. Both control dogs experienced the typical GI toxicity and none of the three receiving the mutant displayed any toxicity. The control dogs and two of the test dogs were sacrificed at I hr to obtain duodenal tissue to measure antibody localization. Both control dogs had grossly visible GI pathology, and the test dogs had normal appearing GI tissue. The third dog has continued to show no signs of toxicity.
Results: A significant amount of localization of the CH 2 deleted cBR96 (cBR96-A) occurred to the GI tract in dogs treated with 400 mg/m 2 although the intact chiBR96 localized slightly better. The levels of localization indicate that roughly equivalent amounts of intact and CH2 deleted cBR96 was delivered to the GI tract in these dogs.
Table 5. Localization of cBR96 to GI tissue.
Group Animal Specific mean Localization
C
C C #271 155 cBR96 135 #272 114 #273 126 cBR96-A 89 #274 52 Using the mean level of specific localization, an amount of cBR96-A equivalent to at least 66% of the amount of cBR96 was delivered to the target organ of toxicity, the duodenum. Based on the dose ranging done with cBR96 in dogs (some clinical signs of toxicity seen at doses of 10 mg/mn), even if this difference is real, it could not explain the difference between significant toxicity and no toxicity, evaluation to date indicated that dogs treated with cBR96-A had no toxicity, pending microscopic histopathologic examination. This evaluation was based on analysis of 2 frozen blocks per dog and 2 sections per block. Replicates were quite good. We also ran historical frozen tissues from dogs treated with native cBR96 or F(ab)2/BR96 and the levels of localization for those tissues were 110 and 0. respectively, consistent with our previous data.
Assuming that there is no toxicity at marginally higher (2X) doses of cBR96-A, these data indicate that the CH 2 domain is associated with the induction of acute gastroenteropathy, and that the removal of this domain prevents the induction of gastroenteropathy mediated by BR96.
This study confirms the results showing that F(ab')2 is not toxic in the dog model and that the toxicity is mediated by the constant region. The CH2 deletion mutant is a candidate for targeting agents clinically. Because of the very long half-life of chimeric BR96, some decrease in the mutant's half-life should be acceptable.
20 Figure 1 shows the measurement of the clearance of the cBR96-A in high Le
Y
expressing dogs. The study used chimeric versus constant region mutant of cBR96- 2.
SCBR96-2 did clear faster than the chimeric BR96. The localization ofcBR96-A to 25 the gastrointestinal epithelium is not significantly affected by this more rapid clearance. More than enough of the cBR96-A localized to have caused toxicity.
Discussion: The constant region of chimeric IgG is responsible for the GI toxicity seen in clinical trials, e.g. with chiBR96-dox. The GI toxicity seen in the dog model O 30 is very similar to the clinical toxicity. Both in man and dog, administration of the unconjugated antibody mediates an acute GI toxicity characterized by rapid onset of vomiting, often with blood.
In man the bleeding is limited to the fundus of the stomach, causing erosion of the superficial mucosa of the stomach. Although the pathology of the wound is limited and resolves, the extreme nature of the nausea and vomiting, unrelieved by antiemetics, defines it as the dose-limiting toxicity.
This toxicity is mediated in man and dog by the antibody molecule alone. At higher doses of the antibody-dox conjugate, additional toxicity is seen in the dog model, probably due to doxorubicin. Although the intact IgG of BR96 causes toxicity in dog and man, the F(ab')2 molecule (divalent and lacking only in the constant region) is not toxic in dogs. This finding has motivated our attempts at high levels, and improves the affinity and specificity of BR96 for tumor antigen.
The CH 2 domain is known to mediate complement and FcR binding. It was not known that structural alteration of the CH2 domain would result in immunoglobuiininduced toxicity inhibition.
Toxicology studv of hBR96-2B 20 The toxicology study of hBR96-2B in high Lewis Y expressor dogs showed that a dose of 400 m:/m 2 did not cause hematemesis nor bloody stools, in contrast to BR96 which consistently causes one or both signs. A dog sacrificed at 24 hrs had normal gross appearance of the GI tract, again in marked contrast to chimeric BR96 which causes hemorrhagic lesions and mucosal erosions.
EXAMPLE 4
*S
The polymerase chain reaction (PCR) is a widely used and versatile technique for the amplification and subsequent modification ofimmunoglobulin genes. The rapidity 30 and accuracy with which antibody genes can be modified in vitro has produced an assortment of novel antibody genes can be modified in vitro has produced an assortment of novel antibodies. For example, PCR methods have been used for engineering antibodies with increased affinity to antigen, for "humanizing" antibodies, and for modulating effector function (Marks, A.D. Griffiths, M.
Malmqvist, T. Clackson, J.M. Bye and G. Winter. 1992. Bypassing immunization: high affinity human antibodies by chain shuffling. Bio/Technology 10:779-783; Rosok, D.E. Yelton, L.J. Harris. J. Bajorath, Hellstrom. I. Hellstrom, G.A. Cruz, K. Kristensson. H. Lin, W.D. Huse and S.M. Glaser. 1996. A combinatorial library strategy for the rapid humanization of anticarcinoma BR96 Fab. J. Biol. Chem. 271:22611-22618; Morgan, D. Jones, A.M. Nesbitt, L.
Chaplin, M.W. Bodmer and S. Emtage. 1995. The N-terminal end of the CH2 domain of chimeric human IgGI anti-HLA-DR is necessary for Clq, FcyRI and FcyRIII binding. Immunology. 86:319-324).
As part of a more comprehensive study, we desired to introduce various site specific mutations in the CH 2 constant domain of human IgGi. Six specific amino acid residues distributed throughout the CH2 domain previously identified to play a role in immune effector function were marked as targets for mutagenesis (Morgan, A.N., D. Jones, A.M. Nesbitt, L. Chaplin, M.W. Bodmer and S. Emtage. 1995. The Nterminal end of the CH2 domain of chimeric human IgG anti-HLA-DR is necessary for Clq, FcyRI and FcyRIII binding. Immunology. 86:319-324; Duncan, 20 A.R. and G. Winter. 1988. The binding site for Clq on IgG. Nature 332:738-740; Tao, R.I.F. Smith and S.L. Morrison. 1993. Structural features of human S •0 immunoglobulin G that determine isotype-specific differences in complement Sactivation. J.Exp.Med. 178:661-667). five of the six residues were grouped into two clusters-one cluster consisting of two residues, two amino acids apart (Location 25 1, or L and a second cluster consisting of three residues spanning a sequence of five amino acids The remaining amino acid position (L3) made for the total of six residues. We were interested in constructing a panel of mutant CH 2 domain IgGs consisting of each L mutation by itself as well as in combination with other L mutants L1; LI; and L2; L1, L2 and L3; etc.).
S SVarious in vitro methods have been described where PCR is used to simultaneously introduce distally located site-specific mutations within a gene sequence (Ho, S.N.,
II
H.D. Hunt, R.M. Horton, J.K. Pullen and L.R. Pease. 1989. Site-directed mutagenesis by overlap extension. Gene 77:51-59; Ge, L. and P. Rudolpf. 1996.
Simultaneous introduction of multiple mutations using overlap extention PCR.
BioTechniques 22:28-30). Alternatively, an in vivo procedure termed recombination PCR (RPCR) has also successfully been used for rapidly and efficiently generating distally located site-specific mutations (Jones, D.H. and S.C.
Winistorfer. 1993. Use of polymerase chain reaction for making recombinant constructs. p.241-250. In B.A. White Methods in Molecular Biology, Vol.
Humana Press Inc., Totowa, NJ, Jones, D.H. And B.H. Howard. 1991. A rapid method for recombination and site-specific mutagenesis by placing homologous ends on DNA using polymerase chain reaction. BioTechniques 10:62-66). RPCR uses E. Coli's recombination machinery to generate intact circular recombinant plasmids from a transfected mixture of linear PCR-generated product and linearized vector. In vivo recombination is mediated through the joining of nucleotide sequences designed into the 5' ends of both PCR primers that are homologous to DNA sequences encoded by the vector. In this report we describe an extension of the RPCR procedure for simultaneously introducing complex combinations of mutations into an antibody CH 2 domain.
20 Humanized BR96 variable region hcavy and light chain genes, previously cloned and co-expressed as an assembled active Fab fragment in an M 13 phage expression vector, provided the starting material (Rosok, D.E. Yelton, L.J. Harris, J.
Bajorath, Hellstrom, I. Hellstrom, G.A. Cruz, K. Kristensson, H. Lin, W.D.
Huse and S.M. Glaser. 1996. A combinatorial library strategy for the rapid S 25 humanization of anticarcinoma BR96 Fab. J. Biol. Chem. 271:22611-22618). The heavy and light chain V genes were amplified by PCR from a single-stranded M13 DNA template and subcloned by in vivo recombination (Jones, D.H. And B.H.
Howard. 1991. A rapid method for recombination and site-specific mutagenesis by placing homologous ends on DNA using polymerase chain reaction. BioTechniques 30 10:62-66) into vectors pD17-hGla and pD16-hCK, to form pBR96-hGla and "pBR96-hCK respectively. pD17-hGla and pD16-hCK are eukaryotic immunoglobulin expression vectors derived from pcDNA3 (Invitrogen. San Diego, CA). The plasmid pBR96-hGla was further modified by site-directed mutagenesis to introduce two Eco47-III restriction sites flanking the immunoglobulin hinge-
CH
2
-CH
3 domains using standard procedures. The recipient vector was then prepared by digesting pBR96-hGla with Eco47-III, isolating the vector backbone by agarose gel electrophoresis followed by extracting the vector DNA from the excised gel slice using the Qiagen Gel Extraction kit (Qiagen, Chatsworth, CA).
The strategy for introducing multiple mutations within the immunoglobulin CH, gene, shown in Figure 24, relies on the in vivo homologous recombination of several independently amplified PCR products with each other as well as with the pBR96hGla vector DNA. For introducing mutations at two distal locations two PCR products are synthesized (Figure 24B). One end of each PCR product is for recombining with an homologous end of the linear vector, and the other end, encoding the mutation(s) of interest, is for recombining with the neighboring PCR product. As shown in Figure 24B, additional distally-located mutations can be introduced into a target sequence by increasing the number of PCR products proportionately. The recombination of neighboring PCR products always occurs across the regions containing the desired mutations, therefore the oligonucleotide primers encoding these ends Al, A2) contain complementary mutant residues.
20 The mutagenic PCR primers contain at least 15 nucleotides of wild-type sequence flanking each side of the mutant residues for either priming the polymerization reaction or mediating recombination. Two 49-nucleotide long PCR sense and antisense primers (Rs and Ra) contain sequences for recombining with the end regions of the Eco47-III digested pBR96-hGla vector.
Each L mutation was amplified in a separate PCR reaction. The reaction conditions were 250 ng intact pBR96-hGla DNA template, 10 ul of IX Pfu buffer (Stratagene, Inc. San Diego, CA), 10 nmol dNTPs, 200ng each of the appropriate PCR primers, dimethysulfoxide (ATCC, Rockville, MD) and 2.5 units cloned Pfu DNA 30 polymerase in a 100ul reaction volume. Samples were first denatured at 950 C for i* min, cooled to 45 0 C for 5 min, and extended at 72 0 C for 1 min followed by cycles of denaturation at 94 0 C for 45 sec, annealing at 45 0 C for 45 sec, extension at
II
72 0 C for 1 min/kb, followed by a final extension at 72°C for 7 min in a Perkin- Elmer DNA Thermal Cycler (Norwalk, CT). The amplified products were purified from a 1% agarose gel, extracted with Qiagen Gel Extraction kit and the recovered DNA quantitated. 50 ng of each PCR product was mixed with 25 ng of the Eco47- III digested pBR96-hGla vector, transfected into Max competent E. coli according to the manufacturer's procedure (GIBCO BRL/Life Technologies, Gaithersburg, MD), and the entire transfection reaction plated onto selective LB agar plates containing 100 ug/ml ampicillin.
The results of several cloning experiments are summarized in the Table that follows.
Typically the transformations produced from 80 to 200 bacterial colonies.
Individual colonies were selected and grown overnight in 2 ml liquid cultures for isolation of miniprep plasmid DNA (Qiagen) and analysis by Eco47-III restriction endonuclease mapping. Among 24 independent transformants analyzed from triple homologous recombination events (two PCR products plus vector) 11 clones contained the predicted 1.4 kpb DNA insert.
Figure 25 shows a sample diagnostic restriction analysis of DNA prepared from clones derived from quadruple homologous recombination events (three PCR 20 products plus vector). Additional sampling of clones resulting from quadruple recombination yielded a cloning efficiency of 29% (7 clones containing inserts/24 clones sampled). At this point, due to the small sampling sizes, we do not know whether the differences in the cloning efficiencies observed between the triple and quadruple recombination events are meaningful.
To evaluate the expression of Lef -binding activity of the CH 2 mutant IgGs, miniprep DNAs from 6 clones derived from the triple recombination reaction and 6 clones derived from the quadruple recombination reaction exhibiting the predicted diagnostic Eco47-III restriction patterns were isolated, mixed with pBR96- hCK S 30 DNA and used to co-transfect COS7 cells. 48 hour spent supernatants from 3 ml cultures were assayed for total IgG production and for Le' binding activity by enzyme-linked immunosorbent assay (EIA) as described (Yelton, M.J. Rosok, G.A. Cruz, W.L. Cosand, J. Bajorath, I. Hellstom, Hellstorm, W.D. Huse and S.M. Glaser. 1995. Affinity maturation of the BR96 anti-carcinoma antibody by codon-based mutagenesis. J.Immunol. 155:1994-2004). All twelve cultures were found to secrete approximately 2-3 ug/ml Ley -reactive IgG. The spectrum of Ley binding activities were all similar to that of native humanized BR96 IgG indicating that the homologously recombined antibodies did not acquire any gross mutations that could affect antigen binding. To confirm that the desired CH 2 mutations had been incorporated, and to evaluate the recombined genes for misincorporated nucleotides, four of the clones producing functional antibody were sequenced using Sequenase Version 2 DNA Sequencing Kit (United States Biochemical). One clone was found to contain a single nucleotide change within the forward PCR primer used for mediating recombination with vector DNA. We are uncertain whether this error occurred during chemical synthesis of the oligonucleotide primer or is a result of misincorporation during the PCR reaction, despite the fact that we used a thermostable polymerase with proofreading activity.
A RPCR procedure for homologously recombining up to three separate PCRgenerated mutated antibody sequence products into a eukaryotic expression vector for the rapid construction of engineered IgG molecules is described herein. The advantage of this approach is the ability to simultaneously introduce multiple distaily-located mutations with PCR products synthesized by a single round of PCR.
Recoibinant DNAs are produced with a reasonably high cloning efficiency and fidelity of correct nucleotide sequences. The ability to efficiently rejoin several distinct PCR products should permit combinatorial strategies for constructing S 25 complexly mutated protein domains as well as broadening the number and location of desired mutations.
Analysis of transformants generated by multiple-fragment RPCR.
Mutant IgGs PCR HR' events Colonies Cloning Constructed Fragments in Analyzed Efficiencyb reaction 2 2 triple 24 2 3 quadruple 24 33% aHR-homologous recombination bCloning efficiency (number of clones containing 1.4kbp insert/total number of colonies EXAMPLE This example provides two methods for introducing site specific mutations into the CH2 domain of human IgGI constant region containing vectors.
One method involves PCR amplification of a segment or segments of the constant region, wherein mutations are introduced using appropriately constructed oligonucleotides. The vector receiving the fragment(s) is digested with a restriction enzyme to linearize the vector. PCR amplification primers are designed so that the 5' ends of the PCR fragments can hybridize to the DNA sequence of the vectors. If more than one PCR fragment is amplified, then common sequences to the two fragments are introduced by oligonucleotides. Bacteria are transfected with the PCR fragments and with the digested vector. The fragments and vector can recombine by •homologous recombination using the bacteria's recombination machinery. Bacterial colonies are selected and the DNA is analyzed by size and restriction map as a preliminary determination that the vector and fragment(s) recombined correctly.
Correct insertion of fragments with the mutations is confirmed by dideoxynucleotide sequence analysis. DNA is then introduced into mammalian cells as described for the CH2 deleted antibody, and the expressed antibody analyzed for binding and functional activity.
By way of example, mutations Leu to Ala at residue 235 in CH2 and Gly to Ala at residue 237 were introduced by the procedure disclosed in Example 4. The heavy chain vector used for this procedure was pD 17-hG a, similar to pD 17-BR96 vector described herein except that humanized V regions (Rosok. D.E. Yelton. L.J.
Harris, J. Bajorath, K-E. He!lstrom. I, Hellstrom, G.A. Cruz. K. Kristensson, H. Lin, W.D. Huse, and S.M. Glaser, 1996. J. Biol. Chem 271 37:22611-22618) with three affinity mutations (H H2, and H3 mutations) were substituted.
pBR96-hGla contains two Eco47-III restriction sites flanking the Ig hinge-CH2- CH3 domains. The recipient vector was prepared by digesting pBR96-hGla with Eco47-III, isolating the vector by agarose gel electrophoresis, and (3) extracting the vector DNA from the excised gel slice using the Qiagen Gel Extraction kit (Qiagen, Chatsworth, CA). To introduce mutations at a single location, such as for positions 235 and 237, two PCR products were synthesized.
To introduce two distally located mutations, such as for mutant F (also referred to herein as hBR96-2F) with mutations at 235. 237, 331, requires 3 PCR products.
The recombination of neighboring PCR products occurs across the regions containing the desired mutations, therefore the oligonucleotide primers encoding 20 these ends contain complementary mutant residues. The mutagenic PCR nrimers contain at least 15 nucleotides of wild-type sequence flanking each side of the mutant residues for either priming the polymerization reaction or mediating recombination. Two 49-nucieotide long PCR sense and anti-sense primers containing sequences for recombining with the end regions of the Ecc47-III digested 25 pBR96-hGla vector.
PCR amplification used 250 ng intact pBR96-hGla DNA template, 10 u! of Pfu buffer (Stratagene, Inc., San Diego, CA), 10 nmol dNTPs, 200 ng each of the appropriate PCR primers. 10% dimethylsulfoxide (ATCC. Rockville, MD) and units cloned Pfu DNA polymerase (Stratagen, Inc. San Diego, CA) in 100 ul reaction. Samples were denatured at 95°C for 5 min, annealed at 45 0 C for 5 min, and extended at 72 0 C for 1 min followed by 25 cycles of denaturation at 94 0 C for sec, annealing at 45°C for 45 sec, extension at 72 0 C for 1 min/kb, and a final extension at 72 0 C for 7 min. The amplified products were purified from a 1% agarose gei, extracted with the Qiagen Gel Extraction kit and quantitated. 50 mg of each PCR product was mixed with 25 ng of the Eco47-III digested pBR96-hGla vector and transfected in E.coli MAX Efficiency DH5aTM according to the manufacturer's instructions (GIBCO BRL/Life Technologies, Gaithersburg, MD).
The entire transfection reaction was plated onto LB agar plated containing 100 gg/ml ampicillin.
Bacterial colonies were selected and grown overnight at 37° C in 2 ml liquid cultures. DNA was isolated and analyzed by Eco47-III restriction endonuclease mapping. Clones with the correct size insert were sequenced (Sequenase Version 2, U.S. Biochemical Corp., Cleveland, OH).
The second method for introducing site specific mutations into the CH2 domain of human IgG1 involved the method of Kunkel (1987 Methods Enzymology, supra).
For this procedure pD17-hGlb DNA with the Fl origin of replication was introduced into electrocompetent E. coli CJ236 dut-ung- (Bio-Rad Laboratories, Hercules, CA) by electroporation according to manufacturer's instructions. PD17hG Ib is a vector having a constant region but no variable region. The Fl ori site allows treatment of this vector as a phagemid.
Bacteria containing the plasmid were selected by ampicillin resistance. Single stranded uridinylated DNA was prepared using the Muta-Gene Phagemid In Vitro Mutagenesis Version 2 protocol (Bio-Rad). Mutations were introduced by sitedirected mutagenesis with the appropriate antisense oligonucleotide. For molecules with mutations at more than one location, mutations were introduced by either of the two methods discussed above. One method would be to prepare one mutant, for example, mutant 2C (also referred to herein as BR96-2C) with the mutations at 30 residues 318, 320, 322, isolate ssDNA, and introduce a second mutation set with the appropriate anti-sense oligonucleotide. The second method would be to anneal two antisense oligonucleotides with the same uridinylated ssDNA and screen
II
for mutants with both sets of changes. Mutant 2H (hBR96-2H) was also prepared by a combination of thse methods.
The V region of humanized BR96-2 heavy chain was introduced by the homologous recombination method described above in pD17-hJml4.Hl. The pD17-hJml4.H plasmid contains the BR96 humanized variable region with the H1/H2/H3 mutations and the plasmid was used to transfect mutant sequences into mammalian cells. The pD17Glb vector containing the Fc mutation(s) was digested with NheI for 3 hr at 370 C and the DNA isolated by methods described above. Insertion of the V region into the vector was determined by size and restriction enzyme mapping and confirmed by sequence analysis.
Transient expression of whole antibodies was performed by transfection of COS cells. For production of antibody, stable transfections of CHO cells were performed (see description of deleted CH2 mutant). All mutants were purified from CHO culture supernarants by protein A chromatography.
The oligonucleotide primers homoiogous to the vector and used to introduce the constant regions mutations were as follows: 20 Oligonucleotides homologous to vector sequences: Sens(sense)CH2 E47-3-5: CAG GGA GGG AGG GTG TCT GCT GGA AGC CAG GCT CAG CGC TGA CCT CAGA D CH2 E47-3 A (antisense): GGA AAG AAC CAT CAC AGT CTC GCA GGG GCC CAG GGC AGC GCT GGG TGC TT Oligonucleotides to mutate Leu235 to Ala and Gly237 to Ala (underlined sequences show sites of mutation): Antisense CH2 L235-G237/aa: GAA GAG GAA GAC TGA CGG TGC CCC CGC GAG TTC AGG TGC TGA GG 30 SensCH2 L235-G237/AA: CCT CAG CAC CTG AAC TCG CGG GGG CAC CGT CAG TCT TCC TCT TC Oligonucleotides to mutate Glu318, Lys320, Lys322 to Ser
II
Antis(antisense)CH2 EKK/SSS-2: CTG GGA GGG CTT TGT TGG AGA CCG AGC ACG AGT ACG ACT TGC CAT TCA GCC Oligonucleotides to mutate Pro331 to Ala: Antis CH2 P331/A/3: GAT GGT TTT CTC GAT GGC GGC TGG GAG GGC Sense CH2 P33/A: GCC CTC CCA GCC GCC ATC GAG AAA ACC ATC Alternative antisense oligo to introduce Ala at 331 by site-directed mutation: CH2P331A: GAT GGT TTT CTC GAT AGC GGC TGG GAG GGC TTT G Oligonucleotides to mutate Glu318 to Ser, Lys320 to Ser, Lys322 to Ser, and Pro331 to Ala: Antis CH2 EKKP/SSA-6: GAT GGT TTT CTC GAT GGC GGC TGG GAG GGC TTT GTT GGA GAC CGA GCA CGA GTA CGA CTT GCC ATT CAG CCA GTC CTG GTG Sense CH2 EKKP/SSA-6: CAC CAG GAC TGG CTG AAT GGC AAG TCG TAC TCG TGC TCG GTC TCC AAC AAA GCC CTC CCA GCC GCC ATC GAG AAA ACC ATC In vitro Assays of the Mutants Results of the CDC demonstrate that mutant hBR96-2B has approximately 10 fold less activity than the control hBR96-1 (two affinity mutations, one in H2 and one in H3, refer to previous patent (Figure The mutants that have the least ability to kill cells in the presence of complement is hBR96-2C with the triple mutations at positions 318, 320, and 322 and the hBR96-2H mutant (least cytotoxic antibodies in the panel) which contains all six mutations at the three different locations. ADCC activity was most affected by the CH2 deleted hBR96-2 molecule (Figure 21).
hBR96-2B and -2H lost between 100 and 1000 fold activity to kill in the presence of effector cells. In the ADCC assay the hBR96-2B molecule also lost approximately 10 fold activity (Figure 21).
Figures 26-28 provide the amino acid sequences for the heavy chain variable region for both chimeric and humanized BR96 having the HI, H2, and H3 mutations. The amino acid sequence for the light chain variable region is known and methods for generating it are found in PCT Application No. 95/305444. Additionally provided is the amino acid sequence for the IgGI constant region. Mutations in the constant region are marked.
SEQUENCE LISTING GENEIRAL INFORMATION APP'-ICANT: Yelzon, Dale E.
Rosok, Mae Joanne TITLE OF THE !NVENTION: A METHOD FOR INHIBITING !%21UNOGLOBULIN-INDUCED TOXICITY RESULTING 'FROM THE USE OF I'AM~UNOGLOBULINS IN THERAPY AND IN VIVO DIAGNOSIS (iii) NUMBER OF SEQUENCES: 27 (iv) CORRESCNDENCE ADDRESS: ADDRESSEE: Merchant, Gould, Smith, Edell, Welter Schmidt STREET: 11150 Santa Monica Boulevard, Suite 400 CITY: Los Angeles STATE: CA CCUNTRY: USA 90025 COMPUTER READABLE FORM: MEDIUM TYPE: Diskette COMPUTER: IBM Compatible OPERATING SYSTEM: DOS SC7-WARE: FascSEQ for W4indows Version CURRENT APPLICATION DATA: APP-LICATION NUMBER: PCT US97/13562 FILING DATE: 01-AUG-1997
CLASSIFI-CATION:
(v RO APPLICATION DATA: APPLICATION NUMBER: 60/023,033 FILING DATE: 02-AUG-1996 ~v~)ATTORNEY/AGENT INFORMATION: kA; NA4E Canadv, Karen S.
REZ:ISTPATION NUMBER: 39,927 t REE-.FNC-/!CXET NUMBER: 30436.43WCUl 7_LZ.CCXYMUN!CAT:CN INFORMATION: TELEPHO:NE: 310-445-1140 TELEF7AX: 310-445-9031
TELEX:
INFORIMATION FOR SEQ ID NO-.l: SEQUENCE C?_ARACTERISTICS: LENGTH: 36 base pairs TYPE: nucleic acid C) STRAIIDEDNESS: single (2)TOPOLOGY: linear (ii) MOLECULE TYPE: cONA SEQUENCE DESCRIPTION: SEQ ID NO:l: 3 :TGGCACCGA AGCTTTCTGG GOAGGOCAG GCCTGA 3 INFORM-ATION FO0R SEQ ID NO:2: SEQUENCE CHA-RACTERISTICS LENGTH: 57 base pairs TYPE: nuclei4c acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cCNA (xi) SEQUENCE OESCRIPT -CN: SE-Q I-D NO:2: TCCGGACATG TTGGTACCCA CGTGGTGGTC GACGCTGAGC CTGGCTTCGA GCAc.ACA INFORMATION TOR SEQ ID NO:3: SEQUENCE CHARACTERISTICS: LENGTH: 55 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ IDC NO:3: GTCGACCACC ACGTGGGTAC CAACATGTCC GGAGCCACAT GGACAGAGGC CGC-CT INFORKATION FOR SEQ ID NO:4: ()SEQUENCE CHARACTERITSTICS: LE7NGTH: 30 base =airs TYPE: nucleic acid S71R.31CEDNESS: sincle TOPOLOGY: linear )iiJ) MOLECULE TYPE: crDNA SEQUE-NCE DESCRIPTION: SEQ ID NO:4: CTGTTCTG TTCATCTCCT, CTCTAGATGG 7 7CRYAT ION FOR SEQ 1D NO: :)SEQUENCE CHAMR.AC-ER:-ST:-CS: LEN=T-: 36 b-ase pairs (C3 S:PA:4DEDNESS: single TOPOLOGY: linear MOLECULE TYPE: cCNA (xi) SEQUENCE DESCRITION: SEQ ID ACCATGGTCG ACCTCAGACC TGCCAAGAGC CATATC INFOCRYATION FOR SEQ 1D NO: 6: i) SEQUENCE CHARACTERISTICS: LENGTH: 40 base pairs TYPE: nucleic ac, STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:6: CATGGTCACG TSGTGTS3TCC C-GGATGCAG GCTAC7CTAG -2 INFORIMATION £CR SEQ ID NO:7: SEQUENCE CHARACTERISTICS: LENGTH: 49 base pairs -YPE: nucleic acid STRAtiDECNESS: s:ngle TOPOLOGY: IL-iear OLECULE TYPE: cONA (xi) SEQUENCE DESCRIPTICN: SEQ ID NO:7: CAGGGAGGGA GGGTGTCTSC TGGAGCCAG GCTCAGCGCT GACCTCAGA !NFO.ATION FOR SEQ ID NO:3: SEQUENCE CHPRCTERISTICS: LENGTH: 50 base pairs TYPE: nucleic acid STPRA-NCEDNESS: single TOPOLOGY: linear (iMOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:8: GGAAAGAACC ATC7ACAGTCT CGCAGGGGCC CAGGGCAGCG CTGGTGCTT INFORMATION FOR SEQ -D NO:9: SEQUENCE CHAkcRCTERIST:-CS: EGH 6691 base pairs TYP-'E: nucleic acid STR.ANDEDNESS: single TOPOLOGY:. linear: 'ii NLE7CULE TYPE: rN lxi) SEQ UENCE DESCRIPTION: SEQ ID NO:9: A7-C=TG G-ACTC7C 7TCCCOV'GC TTGTG7-:TG
AGAG
=7CTCGCGA -rGTACD-GGCC AGTAATCAAT TACGGGT-A T-ACGGTAAA TGGCCG TG3ACGTATGT =CCATAGTA ATTTACGGTA AAkCTGCCCAC CTATTGACGT CAATGACGGT GGGACTTTCC TACTTGGCAG GGTTTTGGCA G-tCATCAT TOCACCCCAT TGACGTCAAT A-.7GTCGTAA CAACTCCGCC T=.!-ATAAG CAGA G=T T-AATACGAC TCACTAT7AGG AGGO'TCGAG TOTIGATA C '!'CCATGGAG TTGTGGTTAA 60 G-1GAAGT GAA T'TGGTGGAG T=TCTGTGT AA.CCTCTGGA CTCCAGAGAA GAGGCTGGAG ATrCCAGACAC TGTA;AAGGGT ACCTGCAAAT GAGCCG-C-rG 7GGACGACGG GGCCT'GGTTTT rCTAGCACCAA SGGC2CATCG
AGGTC-ACCTG
.AG-AC.ATC-T
GAGGTCGCTG
AATT GCAT GA
AGATATACGC
TO AGTTCATA
GGCTGACCGC
ACGCCAATAG
TTGGCAGTAC
AAATGGCCCG
TACATCTACG
GGGCGTGGAT
GGGAGTTTGT
CCATTGACGC
TGGCTAACTA
GAGACCCAAG
ACCGGTCAAT
GCTTGGTCC'T
TCTGGGGGAG
TTCACTTTCA
TGGGTCGCAT
CGATTCACCA
AAGTCTGAGG
GCTTACTGGG
GTCTTCCCCC
AGGC-GC-CG
7TTGAGATGG
CCGA=G
AGTAGTGCGC
AGAATCTGCT
GTTGACATTG
GCCCATATAT
CCAACGACCC
GGACTTTCCA
ATCAAGTGTA
CCTGGCATTA
TATTAGT CAT
AGCGGTTTGA
TTTGGCACCA
.AAATGGGCGG
GAGAACC TAC
CTTGGTACCA
CGATTGGAAT
TCCTTGT OCT
GCTTAGTGCA
GTGACTATTA
ACATTAGTCA
TCTCCAGAGA
ACACAGCCAT
GCCAAGGGAC
TGGCACC CT C ACTACTT CCC
GCTTCGAATA
AGTTTGGCGC
OGOATAG-TA
GAGCPAATT
TAGGGTTAGG
ATTATTGACT
GGAGTTCCGC
CCGCCCATTG
TTGACGTCAA
TCATATGCCA
TGCCCAGTAC
CGCTATTACC
CTCACGGGGA
AAATCAACGG
TAGGCGTGTA
TGCTTCTGG
ATTTAAATTG
TCTTGCGGCC
TGTTTTMAAA
GCCTGGAGGG
CATGTATTGG
AGGTGGTGAT
CAATGCCAAG
GTATTACTGT
TCTGGTCACG
CTCCAAGAGC
CGIAACC G GCCAGAG7AA
CGATOO!'CCG
AGCCAGTAT 0 TAAGCTnACAA
CGTT-TGCOC
AGTTATTAA T
GTTACATAAC
ACGTCAATAA
TGGGTGGACT
AGTACGCCCC
ATGACCTTAT
ATGGTGATGC
TTTCCAAGTC
GACTTTCCAA
CGGTGGGAGG
CTTATCGlAA
ATATCTCCTT
GCTTGCTAGC
GGTGTCCAGT
TCCCTGAAAG
GTTCGCCAGA
ATAACCGACT
AACACCCTGT
GCAAGAGGCC
GTCTCTGTAG
ACCTCTGGGG
ACGGTG7CG 240 '00 360 480 540 600 660 '720 730 340 ?6.3 1200 1260 1320 1380 144 0 560 -320
S..
S.
5@
GGAACTCAGG
GACTCTACTC
ACATCTGCAA
GGCCAGCACA
CATCCCGGCT
CGGAGGCCTC
GCTCTGGGCA
GCTGGGCTCA
CCCCAAAGGC
GTAACTCCCA
CCGTGCCCAG
AGAGTAGCCT
TTCCTCAGCA
GGACACCCTC
CGAAGACCCT
GACAAAGCCG
CCTGCACCAG
CCCAGCCCCC
GCCACATGGA
CCTCTGTCCC
ATGAGCTGAC
ACATCGCCGT
CCGTGCTGGA
GGTGGCAGCA
ACACGCAGAA
GCTCCCCGGG
CCGGGCGCCC
ATGGTTCTTT
GGGTCCCACT
GGGCTCAGCC
AGCAGCACC-
CA.GCCCCTGC
CATGCCCACT
CTACCCCCAC
AACCGACTCC
CACACACTCA
CACCACACAC
CCCAGACCAG
CCCCACGCGG
TCAGACAAAC
GGATCACACA
CAGGACGGAT
CCCGTCCTT
GAAATTCGCATr 45 GACAGCAA.GG
ATGGCTTCTG
AC-CGGCGCAT
AGCGCCCTAG
CCTCTCAAAA
CTAACTCCGC
TGACTAATTT
AAGTAGTGAG
GCTGCGATTT
CCCGCTGCCA
ATTGGCAAGA
AGAATGACCA
ACCTGGTTCT
AGTAGAGAAC
GCCTTAAGAC
60 GGAGGCAGTT
ACAAGGATCA
TATAAACTTC
AAGTATAAGT
GCTCCCCTCC
TCTTTGTGAA
TTTAAAGCTC
TAATTGTTTG
CGCCCTGACC
CCTCAGCAGC
CGTGAATCAC
GGGAGGGAGG
ATGCAGCCCC
TGCCCGCCCC
GGCACAGGCT
GACCTGCCA.A
CAAACTCTCC
ATCTTCTCTC
GTAAGCCAGC
GCATCCAGGG
CCTGAACTCC
ATGATCTCCC
GAGGTCAAGT
CGGGAGGAGC
GACTGGCTGA
ATCGAGAAAA
CAGAGGCCGG
TACAGGGCAG
CAAGAACCAG
GGAGTGGGAG
CTCCGACGGC
GGGGAkCGTC
GAGCCTCTCC
CTCTCGCGGT
AGCATGGAAA
CCACGGGTCA
GTCCCCACAC
AGGGGCTGCC
GCCCTGG;GCT
CTCTGTAGGA
CGGGGGCATG
GGCACTAACC
C-GGGACATGC
GCCCAGAC-C
ACACGTGCAC
AGCAAGGTCC
CACCTCAAGG
CCAGCCCTCC
CCACGTCACG
Cm'GCr-TCGAC
COTTGACCCT
CGCATTGCT
GGGAC-GATTG
AGGCGGAAAG
T.AAGCGCGGC
CGCCCGCTCC
AAGGGAAAAA
CCATCCCGCC
TTTTTATTTA
GAGGCTTTTT
CGCGCCAAAC
TCATGGTTCG
ACGGAGACCT
CAACCTCTTC
CCATTCCTGA
TCAAAGAACC
TTATTGAACA
CTGTTTACCA
TGCAGGAATT
TCCCAGAATA
TTGAAGTCTA
TAAAGCTATG
GGAACCTTAC
TAAGGTAAAT
TGTATTTTAG
AGCGGCGTGC
GTGGTCACCG
AAGCCCAGCA
GTGTCTGCTG
AGTCCAGGGC
ACTCATGCTC
AGGTGCCCCT
GAGCCATATC
ACTCCCTCAG
TGCAGAGCCC
CCAGGCCTCG
ACAGGCCCCA
TGGGGGGACC
GGACCCCTGA
TCAACTGGTA
AGTACAACAG
ATGGCALAGGA
CCATCTCCAA
CTCGGCCCAC
CCCCGAGAAC
GTCAGCCTGA
AGCAATGGGC
TCCTTCTTCC
TTCTCATGC'.
CTGTCTCCGG
CGCACGAGGA
T.AAAGCACCC
GGCCGAGTCT
TC-GCCCAGGC
CTCGGCAGGG
GGGCCACGGG
GACTGTCCTG
CC~TGTCCAT
CCTGGCTGCC
ACTCTCGGGC
GTTCAACAAA
GCCTCACACA
TCGC-ACACGT
CC-CACGAGCC
TCTCACAAGG
T CCCTGGCCC
TGTGCCTTCT
GGAAGGTGCC
GAGTAGGTGT
GGAAGACA-AT
AACCAGCTGG
GGGTGTGGTG
TTTCGCTTTC
AAGCATGCAT
CCTAACTCCG
TGCAGAGGCC
TGGAGGCCTA
TTGACGGCAA
ACCATTGAAC
ACCCTGGCCT
AGTGGAAGGT
GAAGAATCGA
ACCACGAGC-A
ACCGGAATTG
GGAAGCCATG
TGAAAGTGAC
CCCAGGCGTC
CGAGAAGAAA
CATTTTTATA
TTCTGTGGTG
ATXAAATTTT
ATTCCAACCT
ACACCTTCCC
TGCCCTCCAG
ACACCAAGGT
GAAGCCAGGC
AGCAAGGCAG
AGGGAGAGGG
AACCCAGGCC
CGGGAGGACC
CTCGGACACC
AAATCTTGTG
CCCTCCAGCT
GCCGGGTGCT
GTCAGTCTTC
GGTCACATGC
CGTGGACGGC
CACGTACCGT
GTACAAGTGC
AGCCAAAGGT
CCTCTGCCCT
CACAGGTGTA
CCTGCCTGGT
AGCCGGAGAA
TCTACAGCAA
CCGTGATGCA
GTAAATGAGT
TGCTTGGCAC
AGCGCTGCCC
GAGGCCTGAG
TGTGCAGGTG
TGGGGGATTT
AAGCCCTAGG
TTCTGTGAGC
-TCGCGTAGGG
CTGCCCAGCC
CCTGTC-GAGG
CCCCGCACTG
CGC-AGCCTCA
GAACACTCCT
TCTCGGCAGC
GTGCCCC7IGC
TGC-CACTT
AGTTGCCACC
ACTCCCACTG
CATTCTATTC
AGCAGGCATG
GGCTCTAGGG
GTTACGCGCA
TTCCCTTCCT
CTCAATTAGT
CCCAGTTCCG
GAGGCCGCCT
GGCTTTTGCA
TCCTAGCGTG
TGCATCGTCG
CCGCTCAGGA
AAACAGAATC
CCTTTAAAGG
GCTCATTTTC
GCAAGTAAAG
AATCAACCAG
ACGTTTTTCC
CTCTCTGAGG
GACTAACAGG
AGACCATGGG
TGACATAATT
TAAGTGTATA
ATGGAACTGA
GGCTGTCCTA
CAGCTTGGGC
GGACAAGAAA
TCAGCGCTCC
GCCCCGTCTG
TCTTCTGGCT
CTGCACACAA
CTGCCCCTGA
TTCTCTCCTC
ACAAAACTCA
CAAGGCGGGA
GACACGTCCA
CTCTTCCCCC
GTGGTGGTGG
GTGGAGGTGC
GTGGTCAGCG
AAGGTCTCCA
GGGACCCGTG
GAGAGTGACC
CACCCTGCCC
CAAAGGCTTC
CAACTACAAG
GCTCACCGTG
TGAGGCTCTG
GCGACGGCCG
GTACCCCCTG
TGC-GCCCCTG
TGGCATGAGG
TGCCTGGGCC
GCCAGCGTGG
AGCC-CTGGG
GCCCCTGTCC
ACAGGCCCTC
TCGCACCCGC
GACTGGTGCA
AGGTTGGCCG
CCCGGGCGAA
CGGACACAGG
TTCTCCACAT
AGCCGCCACA
fCCAGTGCCG
CATCTGT.TGT
TCCTTTCCTA
TGGGGGGTGG
CTGGGGATGC
GGTATCCCCA
GCGTGACCGC
-ITCTCGCCAC
CAGCAACCAT
CCCATTCTCC
CGGCCTCTGA
AAAAGCTTGG
AAGGCTGGTA
CCGTGTCCCA
ACGAGTTCAA
TGGTGATTAT
ACAGAATTAA
TTGCCAAAAG
TAGACATGGT
GCCACCTTAG
CAGAAATTGA
TCCAGGAGGA
AAGATGCTTT
ACTTTTGCTG
GGACAAACTA
ATGTGTTAAA
TGAATGGGAG
CAGTCCTCAG
ACCCAGACCT
GTTGGTGAGA
TGCCTGGACG
CCTCTTCACC
TTTTCCCCAG
AGGGGCAGGT
CCTAAGCCCA
CCAGATTCCA
CACATGCCCA
CAGGTGCCCT
CCTCCATCTC
CAAAACCCAA
ACGTGAGCCA
ATAATGCCAA
TCCTCACCGT
ACAAAGCCCT
GGGTGCGAGG
GCTGTACCAA
CCATCCCGGG
TATCCCAGCG
ACCACGCCTC
GACAAGAGCA
CACAACCACT
GCAAGCCCCC
TACATACTTC
CGAGACTC.TG
GAGGCAGAGC
CCCTAGGGTG
CCCTCCCTCCI
GACAGACACA
TCCCGACCTC
CCTCACCCAT
ATGGGGACAC
GATGCCCACA
GCCACACGGC
CTGCACAGCA
CCCCCACGAG
GCTGACCTGC
CACAkCACAGG
CCCTTCCCTG
TTGCCCCTCC
ATAAAATGAG
GGTGGGGCAG
C-GTGGGCTCT
CGCGCCCTGT
TACACTTGCC
GTTCGCCGGG
AGTCCCGCCC
GCCCCATGGC-
GCTATTCCAG
ACAGCTCAGG
GGATTTTATC
AAATATGGGG
GTACTTCCAA
GGGTAGGAAA
TATAGTTCTC
TTTGGATGAT
TTGGATAGTC
ACTCTTTGTG
TTTGGGGAAA
AAAAGGCATC
CAAGTTCTCT
GCTTTAGATC
CCTACAGAGA
CTACTGATTC
CAGTGGTGGA
1680 1740 1800 1860 1920 1980 2040 2100 2160 2220 2280 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200 4260 4320 4380 4440 4500 4560 4620 4680 4740 4800 4860 4920 4980 5040 5100 5160 5220 5280 5340 5400 5460 5520 5580 5640 00*0*0 *too.* S S S @5
ATGCCTTTAA
CTACTGCTGA
AGGACTTTCC
TTGCTTGCTT
TGGAAAAATA
TTTTTCTTAC
GTACCTTTAG
TGACTAGAGA
CTCCCACACC
TTTATTGCAG
GCATTTTTTT
GTCTGGATCG
CCCAACTTGT
ACAAATAAAG
TCTTATCATG
CTGTTTCCTG
ATAAAGTGTA
TCACTGCCCG
CGCGCGGGGA
CTGCGCTCGG
TTATCCACAG
GCCAGGAACC
GAGCATCACA
TACCAGGCGT
ACCGGATACC
TGTAGGTATC
CCCGTTCAGC
AGACACGACT
GTAGGCGGTG
GTATTTGGTA
TGATCCGGCA
ACGCGCAGAA
CAGTGGAACG
ACCTAGATCC
ACTTGGTCTG
TTTCGTTCAT
TTACCATCTG
TTATCAGCAA
TCCGCCTCCA
40 AATAGTTTGC
GGTATGGCTT
TTGTGCAAAA
GCAGTGTTAT
GTAAGATGCT
45 CGGCGACCGA
ACTTTAAAAG
CCGCTGTTGA
TTTACTTTCA
GGAATAAGGG
50 AGCATTTATC
AAACAAATAG
TGAGGAAAAC
CTCTCAACAT
TTCAGAATTG
TGCTATTTAC
TTCTGTAACC
TCCACACAGG
CTTTTTAATT
TCATAATCAG
TCCCCCTGA\
CTTATAATGG
CACTGCATTC
GCTGGATGAT
TTATTGCAGC
CATTTTTTTC
TCTGTATACC
TGTGAAATTG
AAGCCTGGGG
CTTTCCAGTC
GAGGCGGTTT
TCGTTCGGCT
AATCAGGGGA
GTAAAAAGGC
AAAATCGACG
TTCCCCCTGG
TGTCCGCCTT
TCAGTTCGGT
CCGACCGCTG
TATCGCCACT
CTACAGAGTT
TCTGCGCTCT
AACAAACCAC
AAAAAGGATC
AAAACTCACG
TTTTAAATTA
ACAGTTCA
CCATAGTTGC
GCCCCAGTGC
TAAACCAGCC
TCCAGTCTAT
GCAACGTTGT
CATTCAGCTC
AAGCGGTTAG
CACTCATGGT
TTTCTGTGAC
C-TTGCTCTTG
TGCTCATCAT
GATCCAGTTC
CCAGCGTTTC
CGACACGGAA
AGGGTTATTG
GGGTTCCGCG
CTGTTTTGCT
TCTACTCCTC
CTAAGTTTTT
ACCACAAAGG
TTTATAAGTA
CATAGAGTGT
TGTAAAGGGG
CCATACCACA
CCTGAAACAT
TTACAAATAA
TAGTTGTGGT
CCTCCAGCGC
TTATAATGGT
ACTGCATTCT
GTCGACCTCT
TTATCCGCTC
TGCCTAATGA
GGGAAACCTG
GCGTATTGGG
GCGGCGAGCG
TAACGCAGGA
CGCGTTGCTG
CTCAAGTCAG
AAGCTCCCTC
TCTCCCTTCG
GTAGGTCGTT
CGCCTTATCC
GGCAGCAGCC
CTTGAAGTGG
GCTGAAGCCA
CGCTGGTAGC
TCAAGAAGAT
TTA.AGGGATT
AAAATGAAGT
ATGCTTAATC
CTGACTCCCC
TGCAATGATA
AG2CCGGAAGG
TAATTGTTGC
TGCCATTGCT
CGGTTCCCAA.
CTCCTTCG-T
TATGGCAGCA
TGGTGAGTAC
CCCGGCGTCA
TGGAAAACGT
GATGTAACCC
TGGGTGAGCA
ATGTTGAATA
TCTCATGAGC
CACATTTCCC
CAGAAGAAAT
CAAAAAAGAA
TGAGTCATGC
AAAAAGCTGC
GGCATAACAG
CTGCTATTAA
TTAATAACGA
TTTGTAGAGG
AAAATGAATG
AGCAATAGCA
TTGTCCAAAC
GGGGATCTCA
TACAAATAAA
AGTTGTGGTT
AGCTAGAGCT
ACAATTCCAC
GTGAGCTAAC
TCGTGCCAGC
CGCTCTTCCG
GTATCAGCTC
AAGAACATGT
GCGTTTTTCC
AGGTGGCGrA
GTGCGCTCTC
GGAAGCGTGG
CGCTCCAAGC
GGTAACTATC
ACTGGTAACA
TGGCCTAACT
GTTACCTTCG
GGTGGTTTTT
CCTTTC-ATCT
TTGGTCATGA
TTTAAATCAA
AGTGAGGCAC
GTCGTGTAGA
C-CGCGAGACC
GCCGAC-CGCA
CGGGAAGCTA
ACAGGCATCG
CGATCAAGGC
CCTCCGATCG
CTGCATAA-T
TCAACCA AGT
ATACGGGATA
TCTTCGGGGC
?LCTCGTGCAC
AAAACAGGAA
CTCATACTCT
GGATACATAT
CGA.AAAGTGC
GCCATCTAGT
GAGAAAGGTA
TGTGTTTAGT
ACTGCTATAC
TTATAATCAT
TAACTATGCT
ATATTTGATG
TTTTACTTGC
CAATTGTTGT
TCACAAATTT
TCATCAATGT
TGCTGGAGTT
GCAATAGCAT
TGTCCAAACT
TGGCGTAATC
ACAACATACG
TCACATTAAT
TGCATTAATG
CTTCCTCGCT
ACTCAAAGGC
GAGCAAAAGG
ATAGGCTCCG
ACCCGACAGG
CTGTTCCGAC
CGCTTTCTCA
TGGGCTGTGT
GTCTTGAGTC
GGATTAGCAG
ACGGCTACAC
GAAA.AAZGAGT
TTGTTTGCAA
TTTCTACGGG
GATTATCAAA
TCTA-AAGTAT
CTATCTCAGC
TAACTACGAT
CACGCTCACC
GAAGTGGTCC
GAGTAAGTAG
TGGTGTCACG
GAGTTACATG
TTGTCAGAAG
CTCTTACTGT
CATTCTGAGA
ATACCGCGCC
GAAAACTCTC
CCAACTGATC
GGCAAAATGC
TCCTTTTTCA
TTGAATGTAT
CACCTGACGT
GATGATGAGG
GAAGACCCCA
AATAGAACTC
AAGAAAATTA
AACATACTGT
CAAAAATTGT
TATAGTGCCT
TTTAAAA-AAC
TGTTAACTTG
CACAAATAAA
ATCTTATCAT
CTTCGCCCAC
CACAAATTTC
CATCAATGTA
ATGGTCATAG
AGCCGGAAGC
TGCGTTGCGC
AATCGGCCAA
CACTGACTCG
GGTAATACGG
CCAGCAAAAG
CCCCCCTGAC
ACTATAAAGA
CCTGCCGCTT
AT GCTCAkCGC
GCACGAACCC
CAACCCGGTA
AGCGAGGTAT
TAGAAGGACA
TGGTAGCTCT
GCAGCAGATT
GTCTGACGCT
AAGGATCTTC
ATATGAGTAA
GATCTGTCTA
ACGGGAGGGC
GGCTCCAGAT
TGCAACTTTA
TTCGCCA-TT
CTCGTCGTTT
ATCCCCCATG
TAAGTTGGCC
CATGCCATCC
ATAGTGTA-G
ACATAGCAGA
AAGGATCTTA
TTCAGCATCT
CGCAAAAAAG
ATATTATTGA
TTAGAAA-AAT
C
5700 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 7140 7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 7800 7860 7920 7980 8040 8100 8160 8220 8280 8340 8400 8460 8520 8580 8640 8691
C.
6 0 6006 0 0 0S6@ 06~~S SS Ce 0O 0 0 0@ OS S
C
mm..
S
*6 Ce 30
C
0 60 6 0 0O S em S0 INFORMATION FOR SEQ ID SEQUENCE CHAR~ACTERISTICS: LENGTH: 8321 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cONA (xi) SEQUENCE DESCRIPTION: SEQ ID NO: GACGGATCGG GAGATCTGCT AGGTGACCTG AGGCGCGCCG GCTTCGAATA GCCAGAGTAA CCTTTTTTTT TAATTTTATT TTATTTTATT TTTGAGATGG AGTTTGGCGC CGATCTCCCG ATCCCCTATG GTCGACTCTC AGTACAATCT GCTCTGATGC CGCATAC-TTA AGCCAGTATC
TGCTCCCTGC
CAAGGCALAGG
TGCTTCGCGA
AGTAATCAAT
T'rACGGTAAA
TGACGTATGT
ATTTACGGTA
CTATTGACGT
GGGACTTTCC
GGTTTTGGCA
TCCACCCCAT
AATGTCGTAA
TCTATATAAG
TTAATACGAC
AGGTCTCGAG
CACCATGGAG
GTGALAGTGAA
TCTCCTGTGT
CTCCAGAGAA
ATCCAGACAC
ACCTGCAAAT
TGGACGACGG
CTAGCACCAA
GCACAGCGGC
GGAACTCAGG
GACTCTACTC
ACATCTGCAA
GGCCAGCACA
CATCCCGGCT
CGGAGGCCTC
GCTCTGGGCA
GCTGGGCTCA
CCCCAAAGGC
GTAACTCCCA
CCGTGCCCAG
AGAGTAGCCT
CAGAGGCCGG
TACAGGGCAG
CAAGAACCAG
GGAGTGGGAG
CTCC-GACGGC
GGGGAACGTC
GAGccTrcTcc
CTCTCGCGGT
45 AGCATGGAAA
CCACGGGTCA
GTCCCCACAC
AGGGGCTGCC
GCCCTGGGCT
50 CTCTGTAGGA
CGGGGGCATG
GGCACTAACC
GGGGACATGC
GCCCAGACCC
55 ACACGTGCAC
AGCAAGGTCC
CACCTCAAGG
CCAGCCCTCC
CCACGTCACG
CAGCCTCGAC
CCTTGACCCT
CGCATTGTCT
GGGAGGATTG
AGGCGGAAAG
TAAGCGCGGC
CGCCCGCTCC
AAGGGAAAAA
TTGTGTGTTG
CTTGACCGAC
TGTACGGGCC
TACGGGGTC.A
TGGCCCGCCr
TCCCATAGTA
AACTGCCCAC
CAATGACGGT
TACTTGGCAG
GTACATCAAT
TGACGTCAAT
CAACTCCGCC
CAGAGCTCTC
TCACTATAGG
TCTCTAGATA
TTGTGGTTAA
TCTGGTGGAG
AACCTCTGGA
GAGGCTGGAG
TGTAAAGGGT
GAGCCGTCTG
GGCCTGGTTT
GGGCCCATCG
CCTGGGCTGC
CGCCCTGACC
CCTCAGCAGC
CGTGA.ATCAC
GGGAGGGAGG
ATGCAGCCCC
TGCCCGCCCC
GGCACAC-GCT
GACCTGCCA-A
CAAACTCTCC
ATCTTCTCTC
GTAAGCCAGC
GCATCCAGGG
CTCGGCCCAC
CCCCGAC-AAC
GTCAGCCTGA
AGCAATGGGC
TCCTTCTTCC
TTCTCATGCT
CTGTCTCCCG
CGCACGAGGA
TAAAGCACCC
GGCCGAGTCT
TGGCCCAGGC
CTCGGCAGGG
GGGCCACGGG
GACTGTCCTG
CCTAGTCCAT
CCTGGCTGCC
ACTCTCGGGC
GTTCAACAAA
GCCTCACACA
TCGCACACGT
CCCACGAGCC
TCTCACAAGG
TCCCTGGCCC
TGTGCCTTCT
GGAAGGTGCC
GAGTAGGTGT
GGAAGACAAT
AACCAGCTGG
GGGTGTGGTG
TTTCGCTTTC
AAGCATGCAT
GAGGTCGCTG
AATTGCATGA
AGATATACGC
TTAGTTCATA
GGCTGACCGC
ACGCCAATAG
TTGGCAGTAC
AAATGGCCCG
TACATCTACG
GGGCGTGGAT
GGGAGTTTGT
CCATTGACGC
TGGCTAACTA
GAGACCCAAG
ACCGGTCAAT
GCTTGGTCCT
TCTGGGGGAG
TTCACTTTCA
TGGGTCGCAT
CGATTCACCA
AAGTCTGAGG
GCTTACTGGG
GTCTTCCCCC
CTGGTCAAGG
AGCGGCGTGC
GTGGTCACCG
AAGCCCAGCA
GTGTCTGCTG
AGTCCAGGGC
ACTCATGCTC
AGGTGCCCCT
GAGCCATATC
ACTCCCTCAG
TGCAGAGCCC
C-AGGCCTCG
ACCACCACG
CCTCTGCCCTi
CACAGGTGTA
CCTGCCTGGT
AGCCGGAGAA
TCTACAGCAA
CCGTGATGCA
GTAAATGAGT
TGCTTGGCAC
AG CGCTGCC C
GAGGCCTGAG
TGTGCAGGTG
TGGGGGATTT
AAGCCCTAGG
TTCTGTGAGC
GTGCGTAGGG
CTGCCCAGCC
CCTGTGGAGG
CCCCGCACTG
CGGAGCCTCA
GAACACTCCT
TCTCGGCAGC
GTGCCCCTGC
TGGCCCACTT
AGTTGCCAGC
ACTCCCACTG
CATTCTATTC
AGCAGGCATG
GGCTCTAGGG
GTTACGCGCA
TTCCCTTCCT
CTCAATTAGT
AGTAGTGCGC
AGAATCTGCT
GTTGACATTG
GCCCATATAT
CCAACGACCC
GGACTTTCCA
ATCALAGTGTA
CCTGGCATTA
TATTAGTCAT
AGCGGTTTGA
TTTGGCACCA
AAATGGGCGG
GAGAACCCAC
CTTGGTACCA
CGATTGGAAT
TCCTTGTCCT
GCTTAGTGCA
GTGACTATTA
ACATTAGTCA
TCTCCAGAGA
ACACAGCCAT
GCCAAGGGAC
TGGCACCCTC
ACTACTTCCC
ACACCTTCCC
TGCCCTCCAG
ACACCAAGGT
GAAGCCAC-GC
AGCAAGGCAG
AGGGAGAGGG
AACCCAGGCC
CGGGAGGACC
CTCGGACACC
AAATCTTGTG
CCCTCCAGCT
TC-GGTACCAA
GAGAGTGACC
CACCCTGCCC
CA-AAC-GCTTC
CAACTACAAG
GCTCACCGG
TGAGGCTCTG
GCGACGGCCG
GTACCCCCTG
TGGGCCCCTG
TGGCATGAGG
TGCCTGGGCC
GCCAGCGTGG
AGCCCCTGGG
GCCCCTGTCC
ACAGGCCCTC
TCGCACCCGC
GACTGGTGCA
AGGTTGGCCG
CCCGGGCGAA
CGGACACAGG
TTCTCCACAT
AGCCGCCACA
CCCAGTGCCG
CATCTGTTGT
TCCTTTCCTA
TGGGGGGTGG
CT GGGGATG C
GGTATCCCCA
GCGTGACCGC
TTCTCGCCAC
CAGCAACCAT
51
GAGCAAAATT
TAGGGTTAGG
ATTATTrGACT
GGAGTTCCGC
CCGCCCATTG
TTGACGTCAA
TCATATGCCA
TGCCCAGTAC
CGCTATTACC
CTCACGGGGA
AAATCAACGG
TAGGCGTGTA
TGCTTACTGG
ATTTAAATTG
TCTTGCGGCC
TGTTTTAAAA
GCCTGGAGGG
CATGTATTGG
AGGTGGTGAT
CAATGCCAAG
GTATTACTGT
TCTGGTCACG
CTCCAAGAGC
CGAACCGGTG
GGCTGTCCTA
CAGCTTGGGC
GGACAAGAAA
TCAGCGCTCC
GCCCCGTCTG
TCTTCTGGCT
CTGCACACAA
CTGCCCCTGA
TTCTCTCCTC
ACAAPAACTCA
-AAGGCGGGA
CATGTCCGGA
GCTGTACCAA
CCATCCCGGG
TATCCCAGCG
ACCACGCCTC
GACAJAGAGCA
CACAACCACT
GCAAGCCCCC
TACATACTTC
CGAGACTGTG
GAGGCAGAGC
CCCTAGGGTG
CCCTCCCTCC
GACAGACACA
TCCCGACCTC
CCTCACCCAT
ATGGGGACAC
GATGCCCACA
GCCACACGGC
CTGCACAGCA
CCCCCACGAG
GCTGACCTGC
CACACACAGG
CCCTTCCCTG
TTGCCCCTCC
ATAAAATGAG
GGTGGGGCAG
GGTGGGCTCT
CGCGCCCTGT
TACACTTGCC
GTTCGCCGGG
AGTCCCGCCC
TAAGCTACAA
CGTTTTGCGC
AGTTATTAAT
GTTACATAAC
ACGTCAATAA
TGGGTGGACT
AGTACGCCCC
ATGACCTTAT
ATGGTGATGC
TTTCCAAGTC
GACTTTCCAA
CGGTGGGAGG
CTTATCGAAA
ATATCTCCTT
GCTTGCTAGC
GGTGTCCAGT
TCCCTGAAAG
GTTCGCCAGA
ATAACCGACT
AACACCCTGT
GCAAGAGGCC
GTCTCTGTAG
ACCTCTGGGG
ACGGTGTCGT
CAGTCCTCAG
ACCCAGACCT
GTTGGTGAGA
TGCCTG%'AC-G
CCTCTTCACC
TTTTCCCCAG
AGGGGCAGGT
CCTAAGCCCA
CCAGATTCCA
CACATGCCCA
CAGGTGCC-T
GCCACATGGA
CCTC-T,CCC
ATGAGCTGAC
ACATCGCCGT
CCGTGCTLGGA
GGTGGCAGCA
ACACGCAGAA
GCTCCCCGGG
CCGGGCGCCC
ATGGTTCTTT
GGGTCCCACT
GGGCTCAGCC
AGCAGCACCT
CAGCCCCTGC
CATGCCCACT
CTACCCCCAC
AACCGACTCC
CACACACTCA
CACCACACAC
CCCAGACCAG
CCCCACGCGG
TCAGACAAAC
GGATCACACA
CAGGACGGAT
CCCGTGCCTT
GAAATTGCAT
GACAGCAAGG
ATGGCTTCTG
AGCGGCGCAT
AGCGCCCTAG
CCTCTCAAAA
CTAACTCCGC
240 300 360 420 480 540 600 660 720 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 1500 1560 1620 1690 1740 1800 1860 1920 1980 2040 2100 2160 2220 2280 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200
CCATCCCGCC
TTTTTATTTA
GAGGCTTTTT
CGCGCCAAAC
TCATGGTTCG
ACGGAGACCT
CAACCTCTTC
CCATTCCTGA
TCAAAGAACC
TTATTGAACA
CTGTTTACCA
TGCAGGAATT
TCCCAGAATA
TTGAAGTCTA
TAAAGCTATG
GGAACCTTAC
TAAGGTAAAT
TGTATTTTAG
TGAGGAAAAC
CTCTCAACAT
TTCAGAATTG
TGCTATTTAC
TTCTGTAACC
TCCACACAGG
CTTTTTAATT
TCATAATCAG
TCCCCCTGAA
CTTATAATGG
CACTGCATTC
GCTGGATGAT
TTATTGCAGC
CA-ITTTTTTC
TCTGTATACC
TGTGAAATTG
AAGCCTGGGG
CTTTCCAGTC
GAGGCGCGTTT
TCGTTCGGCT
AATCAGGGGA
GTAAAAAGGC
AAAATCGACG
TTCCCCCTGG
TGTCCGCCrlT
TCAGTTC'GT
CCGACCGCTG
TATCGCCACT
CTACAGAGTT
TCTGCGCTCT
AACAAACCAC
50 AAAAAGGATC
AAAACTCACG
TTTTAAATTA
ACAGTTACCA
CCATAGTTGC
55 GCCCCAGTGC
TAAACCAGCC
TCCAGTCTAT
GCAACGTTGT
CATTCAGCTC
AAGCGGTTAG
CACTCATGGT
TTTCTGTGAC
GTTGCTCTTG
TGCTCATCAT
65 GATCCAGTTC
CCAGCGTTTC
CGACACGGAA
CCTAACTCCG
TGCAGAGGCC
TGGAGGCCTA
TTGACGGCAA
ACCATTGAAC
ACCCTGGCCT
AGTGGAAGGT
GAAGAATCGA
ACCACGAGGA
ACCGGAATTG
GGAAGCCATG
TGAAAGTGAC
CCCAGGCGTC
CGAGAAGAAA
CATTTTTATA
TTCTGTGGTG
ATAAAATTTT
ATTCCAACCT
CTGTTTTGCT
TCTACTCCTC
CTAAGTTTTT
ACCACAAAGG
TTTATAAGTA
CATAGAGTGT
TGTAAAGGGG
CCATACCACA
CCTGAAACAT
TTACAAATAA
TAGTTGTGGT
CCTCCAGCGC
TTATA.ATGGT
ACTGCATTCT
GTCGACCTCT
TTATCCGCTC
TGCCTAATGA
-GGAAACCTG3
GCGTATTGGG
GCGGCGAGCG
TAACGCAGGA
CGCGTTGCTG
CTCAAGTCAG
AAGCTCCCTC
TCTCCCTTCG
GTAGGTCGTT
CGCCTTATCC
GGCAGCAGCC
CTTGAAGTGG
GCTGAAGCCA
CGCTGGTAGC
TCAAGAAGAT
TTAAGGGATT
AAAATGAAGT
ATGCTTAATC
CTGACTCCCC
TGCAATGATA
AGCCGGAAGG
TAATTGTTGC
TGCCATTGCT
CGGTTCCCAA
CTCCTTCGGT
TATGGCAGCA
TGGTGAGTAC
CCCGGCGTCA
TGGAAAACGT
GATGTAACCC
TGGGTGAGCA
ATGTTGAATA
CCCAGTTCCG
GAGGCCGCCT
GGCTTTTGCA
TCCTAGCGTG
TGCATCGTCG
CCGCTCAGGA
AAACAGAATC
CCTTTAAAGG
GCTCATTTTC
GCAAGTA.AAG
AATCAACCAG
ACGTTTTTCC
CTCTCTGAGG
GACTAACAGG
AGACCATGGG
TGACATAATT
TAAGTGTATA
ATGGAACTGA
CAGAAGAAAT
CAAAAAAGAA
TGAGTCATGC
AAAAAGCTGC
GGCATAACAG
CTGCTATTAA
TTAATAAGGA
TTTGTAGAGG
AAAATGAATG
AGCAATAGCA
TTGTCCAAAC
GGGGATCTCA
TACAAATAAA
AGTTGTGGTT
AGCTAGAGCT
ACAATTCCAC
GTGAGCTAAC
TCGTGCCAGC
CGCTCTTCCG
GTATCAGCTC
AJAGAACATGT
GCGTTTTTCC
AGGTGGCGAA
GTGC-GCTCTC
GGAAGCGTGG-
CGCTCCAAGC
GGTAACTATC
ACTGGTAACA
TGGCCTAACT
GTTACCTTCG
GGTGGTTTTT
CCTTTGATCT
TTGGTCATGA
TTTAAATCAA
AGTGAGGCAC
GTCGTGTAGA
CCGCGAGACC
GCCGAGCGCA
CGGGAAGCTA
ACAGGCATCG
CGATCAAGGC
CCTCCGATCG
CTGCATAATT
TCAACCAAGT
ATACGGGATA
TCTTCGGGGC
ACTCGTGCAC
AAAACAGGAA
CTCATACTCT
CCCATTCTCC
CGGCCTCTGA
AA.AAGCTTGG
AAGGCTGGTA
CCGTGTCCCA
ACGAGTTCAA
TGGTGATTAT
ACAGAATTAA
TTGCCAAAAG
TAGACATGGT
GCCACCTTAG
CAGAAATTGA
TCCAGGAGGA
AAGATGCTTT
ACTTTTGCTG
GGACAAACTA
ATGTGTTAAA
TGAATGGGAG
GCCATCTAGT
GAGAAAGGTA
TGTGTTTAGT
ACTGCTATAC
TTATAATCAT
TAACTATGCT
ATATTTGATG
TTTTACTTGC
CAATTGTTGT
TCACAAATTT
TCATCA-ATGT
TGCTGGAGTT
GCAATAGCAT
TGTCCAAACT
TGGCGTAATC
ACAACATACG
TCACATTAAT
TGCATTAAG
CTTCCTCGCT
ACT CAAAC-GC
GAGCAAAAGG
ATAGGCTCCG
ACCCGACAGG
CTGTTCCGAC
CGOTTTCTCA
TGGGCTGTGT
GTCTTGAGTC
GGATTAGCAG
ACGGCTACAC
GAAAAAGAGT
TTGTTTGCAA
TTTCTACGGG
GATTATCAAA
TCTAAAGTAT
CTATCTCAGC
TAACTACGAT
CACGCTCACC
GAAGTGGTCC
GAGTAAGTAG
TGGTGTCACG
GAGTTACATG
TTGTCAGAAG
CTCTTACTGT
CATTCTGAGA
ATACCGCGCC
GAAAACTCTC
CCAACTGATC
CC CAAAATG C
TCCTTTTTCA
GCCCCATGGC
GCTATTCCAG
ACAGCTCACG
GGATTTTATC
AAATATGGGG
GTACTTCCAA
GGGTAGGAAA
TATAGTTCTC
TTTGGATGAT
TTGGATAGTC
ACTCTTTGTG
TTTGGGGAAA
AAAAGGCATC
CA.AGTTCTCT
GCTTTAGATC
CCTACAGAGA
CTACTGATTC
CAGTGGTGGA
GATGATGAGG
GAAGACCCCA
AATAGAACTC
AAGAAAATTA
AACATACTGT
CAAAAATTGT
TATAGTGCCT
TTTAAAAAAC
TGTTAACTTG
CACAAATAAA
ATCTTATCAT
CTTCGCCCAC
CACAAATTTC
CATCAATGTA
ATGGTCATAG
AGCCGC-AAGC
TGCGTTGCGC
AATCGGCCZA
CACTGACTCG
GGTAATACGG
CCAGCAAAAG
CCCCCCTGAC
ACTATAAAGA
CCTGCCGCTT
ATGCTCACC
GCACGAACCC
CAACCCGGTA
AGCGAGGTAT
TAGAAGGACA
TGGTAGCTCT
GCAGCAGATT
GTCTGACGCT
AAGGATCTTC
ATATGAGTAA
GATCTGTCTA
ACGGGAGGC
GGCTCCAGAT
TGCAACTTTA
TTCGCCAGTT
CTCGTCGTTT
ATCCCCCATG
TAAGTTGGCC
CATGCCATCC
ATAGTGTATG
ACATAGGAGA
AAGGATCTTA
TTCAGCATCT
CGCAAAAAAG
ATATTATTGA
TGACTAATTT
AAGTAGTGAG
GCTGCGATTT
CCCGCTGCCA
ATTGGCAAGA
AGAATGACCA
ACCTGGTTCT
AGTAGAGAAC
GCCTTAAGAC
GGAGGCAGTT
ACAAGGATCA
TATAAACTTC
AAGTATAAGT
GCTCCCCTCC
TCTTTGTGAA
TTTAAAGCTC
TAATTGTTTG
ATGCCTTTAA
CTACTGCTGA
AGGACTTTCC
TTGCTTGCTT
TGGAAAAATA
TTTTTCTTAC
GTACCTTTAG
TGACTAGAGA
CTCCCACACC
TTTATTGCAG
GCATTTTTT1
GTCTGGATCG
CCCAACTTGT
ACAAATAA-AG
TCTTATCATG
CTGTTTCCTG
ATAAAGTGTA
TCACTGCCCG
CGCGCGGGGA
CTGCGCTCGG
TTATCCACAG
GCCAGGAACC
GAGCATCACA
TACCAGGCGT
ACCGGATACC
TGTAGGTATC
CCCGTTCAGC
AGACAGGACT
GTAGGCGGTG
GTATTTGGTA
TGATCCGGCA
ACGCGCAGAA
CAGTGGAACG
ACCTAGATCC
ACTTGGTCTG
TTTCGTTCAT
TTACCATCTG
TTATCAGCAA
TCCGCCTCCA
AATAGTTTGC
GGTATGGCTT
*TTGTGCAAAA
GCAGTGTTAT
GTAAGATGCT
CGGCGACCGA
ACTTTAAAAG
CCGCTGTTGA
TTTACTTTCA
GGAATAAGGG
AGCATTTATC
4260 4320 4380 4440 4500 4560 4620 4680 4740 4800 4860 4920 4980 5040 5100 5160 5220 5280 5340 5400 5460 5520 5580 5640 5700 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 7140 7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 7800 7860 7920 7980 8040 8100 8160 8220
C
AGGGTTATTG TCTCATGAGC GGATACATAT TTGAATGTAT TTAGAAAAAT AAACAAkATAG GGGTTCCGCG CACATTTCCC CGAAAAGTGC CACCTGACGT C INFORM.ATION FOR SEQ ID NO:ll: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 8897 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:1l: 8280 8321
GGTACCAATT
TGTTGGTGCT
CAGTCTCCCT
TCATTGTACA
CTCCACAGCT
GCGGCAGTGG
TGGGAGTTTA
AGTTGGAAAT
AAACTCTGAG
AGGTCAGAAA
AGAACTTTAT
TACGCTTCTT
CCTAACATGC
CATCCTGTTT
CATCTGATGA
ATCCCAGAGA
AGGAGAGTGT
CGCTGAGCAA
GCCTGAGCT-
CCCACCTGCT
CCACAGGGGA
CCTCCTTGGC
CACCTGTGGT
CA.ATTTCTCT
AATCATCCTT,
ACAAGCCTTC
TCCCCTCCTC
TCCTTTGA-T
TATAAAGAGA
45 ATAAACAAAC
ATGCCTTATT
GAGTACTTTC
AAATGTTGCA
ACTTCTAGAT
50 CTTTATTTAC
TTAAACTGTG
TATACCTACT
AAAAGATATG
TAGAAATTTG
55 ACAAGAAGGG
ATGATCTGTG
TCTTATACCC
GTAAGTGGGG
TGAGTCTGCC
CATCTGTGCC
CTTCAGCAAG
AACACTCACA
ATGGGGCACT
ACCTCTCTCT
CAAATGACTG
TGGGGAAGGA
GAATGTTGAT
TAAATTGATA
GATGTTCTGG
GCCTGTCAGT
TAATAATGGC
CCTGATCTAC
ATCAGGGACA
TTACTGCTTT
AAAACGTAAG
GGGGTCGGAT
AGCATGCAAA
TA.AGGAAT.;G
GGTCTCCTTG
CCTTATCCGC
GCTTCTTTCC
CCAGTTCAAA
GGCCAAAGTA
CACAGAGCAG
AGCAGACTAC
GCCCGTCACA
CCTCAGTTCC
CCTACCCCTA
TTTAATTATG
TTCTOTCTTT
TATAAGGGAC
C3Z;TTCTAT-T
TGTCCTCACA
AGCAAGCCCT
CAATTCCCTG
ATCATTCATT
AATAGGGAAA
TACATTTTTA
CACAACCTAA
AAGGTTCTAT
GACTGAGTGT
AAAAGCCAAA
GTATGTTTAT
CACACAGATG
TTCTGTATGT
GATGGAAATT
GCTTCTGGGG
CACTGTTCTG
AGTTAATAGA
GCCTGGGATC
TTCCAGGGCT
CTGTTTGGCT
GGGACAGAGG
TGTTTGGGA.A
CTGGCCCTGC
GCCTACACTC
ACAATCCCTT
CAGTCATGGA
GAGTATCAAA
TCTCCTTAGG
ATTCCTGCTT
CTTGGAGATC
AACACCTATT
AAAGTTTCCA
GATTTCACAC
CAAGGTTCAC
TCTCGAGTCT
GACGTGGCCA
GCCCTCAGAA
GGGGAAGCTA
CTATAATTAT
AAACAACACA
TCAGGAACTG
TC-TGGAACTG
CAGTGGAAGG
GAGAC-CAAGG
GAGAAACACA
AAGAGCTTCA
AGCCTGACCC
TTGCGGTCCT
CTAATGTTGG
CCTCATTTAA
TAAAT1ATGTA
TACCCTATCA
GTCCCCTGGG
CATAGTCCTT
AGAJATCAACC
GCAACATC-AT
TGTTTAAGTT
AACAGGTACT
TTTAATCCAC
AAAGCTGAGA
CCCCACCCAC
AATTGGAAAT
ACATTAGAAT
AATCTCATAA
TTTCATCCAT
ACTCTTAGCT
TCTTGGTAAT
TATACACATT
TAGAAGAGGA
AAATAGCTAC
CAAGGTGCTC
AGCTAGGAGC
ACAGAATTAA
GGGGGAAGGG
CCCTCTCAGC
TGAAGGGGTT
TGTCCTGCTT
GAAACTACAT
TCTTTCAAAC
TCTCGAGCAC
CCAGCAGTGA
AAGCGTCCAT
TAGAATGGTA
ACCGATTTTC
TCAAGATCAG
ATGTTCCATT
CTAGATAACC
TTCTTTGCCT
TGGCTGCAAA
GGAAGAAACT
CTGGGATAAG
CCCAAGGGCA
TGGCTGCACC
CCTCTGTTGT
TGGATAACGC
ACAGCACCTA
AAGTCTACGC
ACAGGGGAGA
CCTCCCATCC
CCAGCTC.ATC
AGGAGAATGA
TAATTATTAT
GTCATCCTA-A
TCCTCTGCAA
CCATGGTAGG
TTTA.AGGGTG
AAAGCAAAZTT
ATAAAATAAC
CATCATGGTA
GAGGGACTCC
ACTATACTGT
GACAAATATA
CAAAAAACTA
AGCCCGATTG
ACCCAATGAG
AAATAATGTT
ATA.AAGTTCA
GGGGGTGGGC
GTTCTGTTCC
ATGCTTCAAA
ATAAGTAATA
CTGCCTAATC
AACAAAACAA
ACACATACAT
CCTTGCCCAG
CACATGTAAA
TACTCATCCA
CAGGAGTAAC
TGTTTTTCTT
AAGGAAGCAC
TTTGGAGGTT
53
CATGAAGTTG
TGTTTTGATG
CTCTTGCAGA
CCTGCAGAAA
TGGGGTCCCA
CAGAGTGGAG
CACGTTCGGC
GGTCAATCGA
AAAGCATTGA
GAGCTCCAAC
CAAAACATCA
CATGCTGTTT
GAACTTTGTT
ATCTGTCTTC
GTGCCTGCTG
CCTCCAATCG
CAGCCTCAGC
CTGCGAAGTC
GTGTTAGAGG
TTTGGCCTCT
TTTCACCTCA
ATAAATAAAG
CTGTTGTTTT
GGCACGTAAC
CACAGTCCTC
AGAGACTTGC
ACAGGTCfTA
TTTCJAAAAGA
AACACAATAA
CTTAGACTTA
TGTCTGCCAA
GAGATTAAAA
TTCTATAACT
TGCAAGAATG
TCCAAC-ZATA
GAGAATTAAC
ACATAAGAGA
AAACCAGGTA
GAGTTAGTGC
TCGTGTGGGG
ATAACTTCAC
GGTCAAGACC
CTGCCCWCTT
CAGGCCTGCT.
AGAAATTAAA
ACACTGGAAA
TGAGGACTCT
TCCAACACAC
TAACACAGCA
TCCAGTCAGT
CTTGCC-CTTC
TGAGTAGGGG
CCTGTTAGGC
ACCCAAATTC
TCTAGTCAGA
CCAGGCCAGT
GACAGGTTCA
GCTGAGGATC
TCGGGGACAA
TTGGAATTCT
GTTTACTGCA
AAAACAATTT
AGATTTTAAA
TCTGTCTGTC
ACTTAAACAC
ATCTTCCCGC
AATAACTTCT
GGTAACTCCC
AGCACCCTGA
ACCCATCAGG
GAGAAGTGCC
GACCCTTTTT
CCCCCCTCCT
TGA.ATCTTTG
ACCAACTACT
CATTTATAAA
CC-TCAAACCC
TTC-CTTGTTT
CAGTCATATA
AG.AALACCTGC
AAGCAATTAA
ATGGAATGTC
GGGCCGTATT
ACATTCATTA
CAGCAA.TCCC
TTCAAAGCAG
GAATGAGTTA
AAGCTACAAC
AACTCAATGC
AAAATAAAGT
CTGGC-AGAA.G
TTGTGCAGTT
ATAAAGAACA
AACGCAGCTG
GAGCCCTGAA
ATTTTCCTGG
TGAAACAGAC
CCCATGTATG
TCCTCATTCT
CTTTCTAAGT
TCCCTTCCCT
ACTGGGAAAG
TGCCTCTTGA
TGAGACTCAG
120 180 240 300 360 420 480 540 600 660 720 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 1500 1560 1 620 1680 1740 1800 1860 1920 1980 2040 2100 2160 2220 2280 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120
TAATGTCCCT
CAAAGGCAGG
ATCCALACCGC
GCCTCGACTG
TTGACCCTGG
CATTGTCTGA
GAGGATTGGG
GCGGAAAGAA
AGCGCGGCGG
CCCGCTCCTT
GGGAAAAAAA
ATCCCGCCCC
TTTATTTATG
GGCTTTTTTG
CGCCAAACTT
ATGGTTCGAC
GGAGACCTAC
ACCTCTTCAG
ATTCCTGAGA
AAAGAACCAC
ATTGAACAAC
GTTTACCAGG
CAGGAATTTG
CCAGAATACC
GAAGTCTACG
AAGCTATGCA
AACCTTACTT
AGGTAAATAT
T.ATTTTAGAT
AGGAAAACCT
CTCAACATTC
CAGAATTGCT
CTATTTACAC
CTGTAACCTT
CACACAGGCA
TTTTALATTTG
ATAATCAGCC
CCCCTGAACC
TATAATGGTT
CTGCATTCTA
TGGATGATCC
ATTGCAGCTT
TTTTTTTCAC
TGTATACCGT
TGAAATTGTT
GCCTGGGGTG
TTCCAGTCGG
GGCGGTTTGC
GTTCGGCTGC
50 TCAGGGGATA
AAAAAGGCCG
ALATCGACGCT
CCCCCTGGAA
TCCGCCTTTC
55 AGTTCGGTGT
GACCGCTGCG
TCGCCACTGG
ACAGAGTTCT
TGCGCTCTGC
CAAACCACCG
AAAGGATCTC
AACTCACGTT
TTAAATTAA.A
AGTTACCAAT
65 ATAGTTGCCT
CCCAGTGCTG
AACCAGCCAG
TCCAATGACA
CATAATCCAG
GGAAGGGCCC
TGCCTTCTAG
AAGGTGCCAC
GTAGGTGTCA
AAGACAATAG
CCAGCTGGGG
GTGTGGTGGT
TCGCTTTCTT
GCATGCATCT
TAACTCCGCC
CAGAGGCCGA
GAGGCCTAGG
GACGGCAATC
CATTGAACTG
CCTGGCCTCC
TGGAAGGTAA
AGAATCGACC
CACGAGGAGC
CGGAATTGGC
AAGCCATGAA
AAAGTGACAC
CAGGCGTCCT
AGAAGAAAGA
TTTTTATAAG
CTGTGGTGTG
AAAATTTTTA
TCCAACCTAT
G-TTTTGCTCA
TACTCCTCC-A
AAGTTTTTTG
CACAAAGGAA
TATAAGTAGG
TAGA-TCTCT
TAAAGGGGTT
ATACCACATT
TGAAACATAA
ACAAAT.AAAG
GTTGTGGTTT
TCCAGCGCGG
ATA.ATGGTTA
TGCATTCTAG
CGACCTCTAG
ATCCGCTCAC
CCTAATGA-T
GAA:ACCTGTC
GTATTGGGCG
GGCGAGCGGT
ACGCAGGAAA
CGTTGCTGGC
CAAGTCAGAG
GCTCCCTCGT
TCCCTTCGGG
AGGTCGTTCG
CCTTATCCGG
CAGCAGCCAC
TGAAGTGGTG
TGAAGCCAGT
CTGGTAGCGG
AAGAAGATCC
AAGGGATTTT
AATGAAGTTT
GCTTAATCAG
GACTCCCCGT
CAATGATACC
CCGGAAGGGC
TGAACTTGCT
TTATGAATTC
TATTCTATAG
TTGCCAGCCA
TCCCACTGTC
TTCTATTCTG
CAGGCATGCT
CTCTAGGGGG
TACGCGCAGC
CCCTTCCTTT
CAATTAGTCA
CAGTTCCGCC
GGCCGCCTCG
CTTTTGCAAA
CTAGCGTGAA
CATCGTCGCC
GCTCAGGAAC
ACAGAATCTG
TTTAAAGGAC
TCATTTTCTT
AAGTAAAGTA
TCAACCAGGC
GTTTTTCCCA
CTCTGAGGTC
CTAACAGGAA
ACCATGGGAC
ACATAATTGG
AGTGTATAAT
GGAACTGATG
GAAGAAATGC
AAAAAGAAGA
AGTCATGCTG
PLAAGCTGCAC
CATAACAGTT
GCTATTAATA
AATAAGGAAT
TGTAGA-BGGTT
AATGAATGCA
CAATAGCATC
GTCCAAACTC
GGATCTCATG
CAAATAAAGC
TTGTGGTTTG
CTAGAGCTTG
AATTCCACAC
GAGCTAACTC
GTGCCAGCTG
CTCTTCCGCT
ATCAGCTCAC
GAACATGTGA
GTTTTTCCAT
GTGGCGAAAC
GCGCTCTCCT
AAGCGTGGCG
CTCCAAGCTG
TAACTATCGT
TGGTAACAGG
GCCTAACTAC
TACCTTCGGA
TGGTTTTTTT
TTTGATCTTT
GGTCATGAGA
TAAATCAATC
TGAGGCACCT
CGTGTAGATA
GCGAGACCCA
CGAGCGCAGA
CACTCATCCC
TTGCGGCCGC
TGTCACCTAA
TCTGTTGTTT
CTTTCCTAAT
GGGGGTGGGG
GGGGATGCrG
TATCCCCACG
GTGACCGCTA
CTCGCCACGT
GCAACCATAG
CATTCTCCGC
GCCTCTGAGC
AAGCTTGGAC
GGCTGGTAGG
GTGTCCCAAA
GAGTTCAAGT
GTGATTATGG
AGAATTAATA
GCCAAAAGTT
GACATGGTTT
CACCTTAGAC
GAAATTGATT
CAGGAGGAAA
GATGCTTTCA
TTTTGCTGGC
ACAAACTACC
GTGTTAAACT
AATGGGAGCA
CATCTAGTGA
GAAAGGTAGA
TGTTTAGTAA
TGCTATACAA
ATAATCATAA
ACTATGCTCA
ATTTGATGTA
TTACTTGCTT
ATTGTTGTTG
ACAAATTTCA
ATCAATGTAT
CTGGAGTTC-T
AATAGCATCA
TCC.AAACTCA
GCGTAATCAT
AACATACGAG
ACATTAATTIG
CATTAATGAA
TCCTCGCTCA
TCAAAGGCGG
GCAAAAGGCC
AGGCTCCGCC
CCGACAGGAC
GTTCCGACCC
CTTTCTCAA-A
GGCTGTGTGC
CTTGAGTCCA
ATTAGCAGAG
GGCTACACTA
AAAAGAGTTG
GTTTGCALAGC
TCTACGGGGT
TTATCAAAAA
TAAAGTATAT
ATCTCAGCGA
ACTAGGATAC
CGCTCACCGG
AGTGGTCCTG
TGGGGGCCAA
TTGCTAGCTT
ATGCTAGAGC
GCCCCTCCCC
AAAATGAGGA
TGGGGCAGGA
TGGGCTCTAT
CGCCCTGTAG
CACTTGCCAG
TCGCCGGGC
TCCCGCCCCT
CCCATGGCTG
TATTCCAGAA
AGCTCAGGGC
ATTTTATCCC
ATATGGGGAT
ACTTCCAAAG
GTAGGAAAAC
TAGTTCTCAG
TGGATGATGC
GGATAGTCGG
TCTTTGTGAC
TGGGGAAATA
AAGGCATCA.A
AGTTCTCTGC
TTTAGATCTC
TACAGAGATT
ACTGATTCTA
GTGGTGGAAT
TGATGAGGCT
AGACCCCAAG
TAGA-ACTCTT
GAAAATTATG
CATACTGTTT
AAATTGTGT
TAG'TGCCTTG
TAAXa.AACCT
TTAACTTGTT
CAAATA?-AGC
CTTATCATGT
TCGCCCACCC
CAAA;VTTTCAC
TCAATGTATC
GGTCATAGCT
CCGGAAGCAT
CGTTGCGCTC'
TCGGCCAACG
CTGACTCGCT
TAATACGGTT
AGCAAAAGGC
CCCCTGACGA
TATAAAGATA
TGCCGCTTAC
GCTCACGCTG
ACGAACCCCC
ACCCGGTAAG
CGAGGTATGT
GAAGGACAGT
GTAGCTCTTG
AGCAGATTAC
CTGACGCTCA
GGATCTTCAC
ATGAGTAAAC
TCTGTCTATT
GGGAGGGCTT
CTCCAGATTT
CAACTTTATC
ATTGAACAAT
CACGTGTTGG
TCGCTGATCA
CGTGCCTTCC
AATTGCATCG
CAGCAAGGGG
GGCTTCTGAG
CGGCGCATTA
CGCCCTAGCG
TCTCAAAAAA
AACTCCGCCC
ACTAATTTTT
GTAGTGAGGA
TGCGATTTCG
CGCTGCCATC
TGGCAAGAAC
AATGACCACA
CTGGTTCTCC
TAGAGAACTC
CTTAAGACTT
AGGCAGTTCT
AAGGATCATG
TAAACTTCTC
GTATAAGTTT
TCCCCTCCTA
TTTGTGAAGG
TAAAGCTCTA
ATTGTTTGTC,
GCCTTTAATG
ACTGCTGACT
GACTTTCCTT
GCTTGCTTTG
GALAAAAZTATT
TTTCTTACTC
ACCTTTAGCT
ACTAGAGATC
CCCACACCTC
TATTGCAGCT
AT7TTTTTTCA
CTGC-ATCGGC
CAACTTG.-TT
AAPATAAAGCA
TTATCATGTC
GTTTCCTGTG
AAAGTGTAPA
ACTGCCCGCT
CGCGGGGAGA
GCGCTCGGTC
ATCCACAGAA
CAGGAACCGT
GCATCACAAA
CCAGGCGTTT
CGGATACCTG
TAGGTATCTC
CGTTCAGCCC
ACACGACTTA
AGGCGGTGCT
ATTTGGTATC
ATCCGGCAA-A
GCGCAGAAAA
GTGGAACGAA
CTAGATCCTT
TTGGTCTGAC
TCGTTCATCC
ACCATCTGGC
ATCAGCAATA
CGCCTCCATC
3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200 4260 4320 4380 4440 4500 4560.
4620 4680 4740 4800 4860 4920 4980 5040 5100 5160 5220 5280 5340 5400 5460 5520 5580 5640 5700 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 708 0 7140
CAGTCTATTA
AACGTTGTTG
TTCAGCTCCG
GCGGTTAGCT
CTCATGGTTA
TCTGTGACTG
TGCTCTTGCC
CTCATCATTG
TCCAGTTCGA
AGCGTTTCTG
ACACGGAAAT
GGTTATTGTC
GTTCCGCGCA
GCCCGGGTGA
TATTTTATTT
TCTCAGTACA
GTTGGAGGTC
CGACA.ATTGC
GGCCAGATAT
GTCATTAGTT
GCCTGGCTGA
AGTAACGCCA
CCACTTGGCA
CGGTAAATGG
GCAGTACATC
CAATGGGCGT
CAATGGGAGT
CGCCCCATTG
TCTCTGGCTA
TAGGGAGACC
ATTGTTGCCG
CCATTGCTAC
GTTCCCAACG
CCTTCGGTCC
TGGCAGCACT
GTGAGTACTC
CGGCGTCAAT
GAAAACGTTC
TGTAACCCAC
GGTGAGCAAA
GTTGAATACT
TCATGAGCGG
CATTTCCCCG
CCTGAGGCGC
TATTTTTGAG
ATCTGCTCTG
GCTGAGTAGT
ATGAAGAATC
ACGCGTTGAC
CATAGCCCAT
CCGCCCAACG
ATAGGGACTT
GTACATCAAG
CCCGCCTGGC
TACGTATTAG
GGATAGCGGT
TTGTTTTGGC
ACGCAAATGG
ACTAGAGAAC
CAAGCTT
GGAAGCTAGA
AGGCATCGTG
ATCAAGGCGA
TCCGATCGTT
GCATAATTCT
A.ACCAAGTCA
ACGGGATAAT
TTCGGGGCGA
TCGTGCACCC
AACAGGAAGG
CATACTCTTC
ATACATATTT
AAAAGTGCCA
GCCGGCTTCG
ATGGAGTTTG
ATGCCGCATA
GCGCGAGCAA
TGCTTAGGGT
ATTGATTATT
ATATGGAGTT
ACCCCCGCCC
TCCATTGACG
TGTATCATAT
ATTATGCCCA
TCATCGCTAT
TTGACTCACG
ACCAAAATCA
GCGGTAGGCG
GTAAGTAGTT
GTGTCACGCT
GTTACATGAT
GTCAGAAGTA
CTTACTGTCA
TTCTGAGAAT
ACCGCGCCAC
AAACTCTCAA
AACTGATCTT
CAAAATGCCG
CTTTTTCAAT
GAATGTATTT
CCTGACGTCG
AATAGCCAGA
GCGCCGATCT
GTTALAGCCAG
AATTTAAGCT
TAGGCGTTTT
GACTAGTTAT
CCGCGTTACA
ATTGACGTCA
TCAATGGGTG
GCCAAGTACG
GTACATGACC
TACCATGGTG
GGGATTTCCA
ACGGGACTTT
TGTACGGTGG
CGCCAGTTAA
CGTCGTTTGG
CCCCCATGTT
AGTTGGCCGC
TGCCATCCGT
AGTGTATGCG
ATAGCAGAAC
GGATCTTACC
CAGCATCTTT
CAAAAAAGGG
ATTATTGAAG
AGAAAAATAA
ACGGATCGGG
GTAACCTTTT
CCCGATCCCC
TATCTGCTCC
ACAACAAGGC
GCGCTGCTTC
TAATAGTAAT
TAACTTACGG
ATAATGACGT
GACTATTTAC
CCCCCTATTG
TTATGGGACT
ATGCGGTTTT
AGTCTCCACC
CCAAAATGTC
GAGGTCTATA
GAAATTAATA
TAGTTTGCGC
TATGGCTTCA
GTGCAAAAAA
AGTGTTATCA
AAGATGCTTT
GCGACCGAGT
TTTAAAAGTG
GCTGTTGAGA
TACTTTCACC
AATAAGGGCG
CATTTATCAG
ACAAATAGGG
AGATCTGCTA
TTTTTAATTT
TATGGTCGAC
CTGCTTGTGT
AAGGCTTGAC
GCGATGTACG
CAATTACGGG
TAAATGGCCC
ATGTTCCCAT
GGTAAACTGC
ACGTCAATGA
TTCCTACT1TG
GGCAGTACAT
CCATTGACGT
GTAACAACTC
TAAGCAGAGC
CGACTCACTA
7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 7800 7860 7920 7980 8040 8100 8160 8220 9280 8340 8400 8460 8520 8580 8640 8700 8760 8820 8880 8897 CCACTGCTTA CTGGCTTATC INFORM4ATION FOR SEQ ID NO:12: SEQUENCE CHLARACTERISTICS: LENGTH: 8321 base pairs TYPE: nucleic acid STRAkNDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cONA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:12: S. 55 S. S
GGTACCAATT
TTGGAATTCT
TGTCCTTGTT
AGTGCAGCCT
CTATTACATG
TAGTCAAGAT
CAGAGACAAT
AGCCGTGTAT
AGGGACTCTG
ACCCTCCTCC
CTTCCCCGAA
55 CTTCCCGGCT
CTCCAGCAGC
CAAGGTGGAC
CCAGGCTCAG
AGGCAGGCCC
AGAGGGTCTT
CAGGCCCTGC
AGGACCCTGC
GACACCTTCT
CTTGTGACAA
65 CCAGCTCAAG
TACCAACATG
GTGACCGCTG
TA-AATTG AT-1A
TGCGGCCGCT
TTAAAAGGTG
GGAGGGTCCC
TATTGGGTTC
GGTGATATAA
GCAAAGAACA
TACTGTGCAA
GTCACGGTCT
AAGAGCACCT
CCGGTGACGG
GTCCTACAGT
TTGGGCACCC
AAGAAAGTTG
CGCTCCTGCC
CGTCTGCCTC
CTGGCTTTTT
ACACAAAGGG
CCCTGACCTA
CTCCTCCCAG
AACTCACACA
GCGGGACAGG
TCCGGAGCCA
TACCAACCTC
TCTCCTTAGG
TC-CTAGCCAC
TCCAGTGTGA
TGCGACTTTC
GCCAGGCTCC
CCGACTATGC
GCCTGTACCT
GAGGCCTGGC
CTTCCGCTAG
CTGGGGGCAC
TGTCGTGGAA
CCTCAGGACT
AGACCTACAT
GTGAGAGGCC
TGGACGCATC
TTCACCCGGA
CCCCAGGCTC
GCAGGTGCTG
AGCCCACCCC
ATTCCAGTAA
TGCCCACCGT
TGCCCTAGAG
CATGGACAGA
TGTCCCTACA
TCTCGAGTCT
CATGGAGTTG
AGTGCAACTG
CTGTGCTGCA
AGGCAAGGGA
AGACTCCGTA
GCAAATGAAC
GGACGGGGCC
CACCAAGGGC
AGCGGCCCTG
CTCAGGCGCC
CTACTCCCTC
CTGCAACGTG
AGCACAGGGA
CCGGCTATGC
GGCCTCTGCC
TGGGCAGGCA
GGCTCAGACC
AAAGGCCAAA
CTCCCAATCT
GCCCAGGTAA
TAGCCTGCAT
GGCCGGCTCG
GGGCAGCCCC
CTAGATAACC
TGGTTAAGCT
GTGGAGTCTG
TCTGGATTCC
CTGGAGTGGG
AAGGGTCGAT
AGCCTGAGGG
TGGTTTGCTT
CCATCGGTCT
GGCTGCCTGG
CTGACCAGCG
AGCAGCGTGG
AATCACAAGC
GGGAGGGTGT
AGCCCCAGTC
CGCCCCACTC
CAGGCTAGGT
TGCCAAGAGC
CTCTCCACTC
TCTCTCTGCA
GCCAGCCCAG
CCAGGGACAC
GCCCACCCTC
GAGAACCACA
C-GTCAATCGA
TGGTCTTCCTl
GGGGAGGCTT
CGTTCAGTGA
TCTCATACAT
TCACCATCTC
ACGAGGAC.AC
ACTGGGGCCA
TCCCCCTGGC
TCAAGGACTA
GCGTGCACAC
TCACCGTGCC
CCAGCAACAC
CTGCTGGAAG
CAGGGCAGCA
ATGCTCAGGG
GCCCCTAACC
CATATCCGGG
CCTCAGCTCG
GAGCCCAAAT
GCCTCGCCCT
ACCACGTGGG
TGCCCTGAGA
GGTGTACACC
1.20 180 240 300 360 420 480 540 600 660 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 CTGCCCCCAT CCCGGGATGA GGCTTCTATC CCAGCGACAT TACAAGACCA CGCCTCCCGT ACCGTGGACA AGAGCAGGTG GCTCTGCACA ACCACTACAC CGGCCGGCAA GCCCCCGCTC CCCCTGTACA TACTTCCCGG CCCCTGCGAG ACTGTGATGG ATGAGGGAGG CAGAGCGGGT TGGGCCCCCT AGGGTGGGGC GCGTGGCCCT CCCTCCAGCA CCTGGGGACA GACACACAGC CTGTCCTCCC GACCTCCATG GCCCTCCCTC ACCCATCTAC ACCCGCATGG GGACACAACC GGTGCAGATG CCCACACACA TGGCCGGCCA CACGGCCACC GGCGAAC'rGC ACAGCACCCA CACAGGCCCC CACGAGCCCC CCACATGCTG ACCTGCTCAG GCCACACACA CACAGGGGAT GTGCCGCCCT TCCCTGCAGG TGTTGTTTGC CCCTCCCCCG TTCCTAATAA AATGAGGAAA GGGTGGGGTG GGGCAGGACA GGATGCGGTG GGCTCTATGG TCCCCACGCG CCCTGTACCG GACCGCTACA CTTGCCAGCG CGCCACGTTC GCCGGGCCTC AACCATAGTC CCGCCCCTAA TTCTCCGCCC CATGGCTGAC CTCTGAGCTA TTCCAGAAGT GCTTGGACAG CTCAGGGCTG CTGGTAGGAT TTTATCCCCG GTCCCAAAAT A:TGGGGATTG GTTCAA.GTAC TTCCAAAGAA GATTA;'TGGGT AGGAAAACCT AATTAATATA GTTCTCAGTA CAAAAGTTTG C-ATGATGCCT CATC-GTTTGG ATAGTCGGALG CCTTAC-ACTC TTTGTGACA-A G A TT TG GGC-AAkATATA GGAGGA-AAAAs GGCATCAAGT TGCTrTTCAAG TTCTCTGCTC TTGC7GGCTT TAGATCTCTT AAACTACCTA CAGAGATTTA GTTAAACTAC TGATTCTAAT TGGGAGCAGT GGTGGAATGC TCTAGTGATG ATGAGGCTAC 50 AAGGTAGAAG ACCCCAAGGA TTTAGTAATA GAACTCTTGC CTATACAAGA AAATTATGGA AATCATAACA TACTGTTTTT TATGCTCAAA AATTGTGTAC 55 TTGATGTATA GTGCCTTGAC ACTTGCTTTA AAAAACCTCC TGTTGTTGTT AACTTGTTTA AAATTTCACA AATAAAGCAT CAATGTATCT =ACATCTCT GGAGTTCTTC GC CCCCA TAGCATCACA AATTTCACAA CAAACTCATC AATGTATCTT GTAATCATGG TCATAGCTGT CATACGAGCC GGAAGCATAA 65 ATTAATTGCG TTGCGCTCAC TTAATGAATC GGCCAACGCG CTCGCTCACT GACTCGCTGC
GCTGACCAAG
CGCCGTGGAG
GCTGGACTCC
GCAGCAGGGG
GCAGAAGAGC
CCCGGGCTCT
GCGCCCAGCA
TTCTTTCCAC
CCCACTGTCC
TCAGCCAGGG
GCACCTGCCC
CCCTGCCTCT
CCCACTCGGG
CCCCACGGCA
GACTCCGGGG
CACTCAGCCC
ACACACACAC
GACCAGAGCA
ACGCGGCACC
ACAAACCCAG
CACACACCAC
ACGGATCAGC
TGCCTTCCTT
TTGCATCGCA
GCAAGGGGGA
CTTCTGAGGC
GCGCATTAPAG
CCCTAGCGCC
TCAAAAAAGG
CTCCGCCCAT
TALATTTTTTT
AGTGAGGAGG
CGATTTCGCG
CTGCCAT CAT
GCAAGA-ACGG
TGACCACAAC
GGTTCTCCAT
GAGAACTCA-A
TAAGACTTAT
GCAGTTCTGT
GGATCATGCA
AACTTCTCCC
ATAA-GTTTGA
CCCTCCTAAA
TGTGA.AGGA
AAGCTCTAAG
TGTTTGTGTA
CTTTAATGAG
TGCTGACTCT
CTTTCCTTCA
TTGCTTTGCT
AAAATATTCT
TCTTACTCCA
CTTTAGCTTT
TAGAGATCAT
CACACCTCCC
TTGCAGCTTA
TTTTTTCACT
GGATCGGCTG
ACTTGTTTAT
ATAAAGCATT
ATCATGTCTG
TTCCTGTGTG
AGTGTAAAGC
TGCCCGCTTT
CGGGGAGAGG
GCTCGGTCGT
AACCAGGTCA
TGGGAGAGCA
GACGGCTCCT
AACGTCTTCT
CTCTCCCTGT
CGCGGTCGCA
TGGAAATAAA
GGGTCAGGCC
CCACACTGGC
GCTGCCCTCG
TGGGCTGGGC
GTAGGAGACT
GGCATGCCTA
CTAACCCCTG
ACATGCACTC
AGACCCGTTC
GTGCACGCCT
AGGTCCTCGC
TCAAGGCCCA
CCCTCCTCTC
GTCACGTCCC
CTCGACTGTG
GACCCTGGAA
TTGTCTGAGT
GGATTGGGAA
GGAAAGAACC
CGCGGCGGGT
CGCTCCTTTC
GAAAAAAAGC
CCCGCCCCTA
TATTTATGCA
CTTTTTTGGA
CCAAACTTGA
GGTTCGACCA
AGACCTACCC
CTCTTCAGTG
TCCTGAGAAG
AGAACCACCA
TGAACAACCG
TTACCAGGAA
GGAATTTGAA
AGAATACCCA
AGTCTACGAG
GCTATGCATT
CCTTACTTCT
GTAAATATAA
TTTTAGATTC
GAAAACCTGT
CAACATTCTA
GAATTGCTAA
ATTTACACCA
GTAACCTTTA
CACAGGCATA
TTAATTTGTA
AATCAGCCAT
CCTGAACCTG
TAATGGTTAC
GCATTCTAGT
GATGATCCTC
TGCAGCTTAT
TTTTTCACTG
TATACCGTCG
AAATTGTTAT
CTGGGGTGCC
CCAGTCGGGA
CGGTTTGCGT
TCGGCTGCGG
GCCTGACCTG
ATGGGCAGCC
TCTTCCTCTA
CATGCTCCGT
CTCCGGGTAA
CGAGGATGCT
GCACCCAGCG
GAGTCTGAGG
CCAGGCTGTG
GCAGGGTGGG
CACGGGAAGC
GTCCTGTTCT
GTCCATGTGC
GCTGCCCTGC
TCGGGCCCTG
AACAAAC CCC
CACACACGGA
ACACGTGAAC
CGAGCCTCTC
ACAAGGGTGC
TGGCCCTGGC
CCTTCTAGTT
GGTGCCACTC
AGGTGTCATT
GACAATAGCA
AGCTGGGGCT
GTGGTGGTTA
GCTTTCTTCC
ATGCATCTCA
ACTCCGCCCA
GAGGCCGAGG
GGCCTAGGCT
CGGCAATCCT
TTGAACTGCA
TC-GCCTCCGC
GAAGGTAAAC
AATCGACCTT
CGAGGAGCTC
GAATTGGCAA
GCCATGAATC
AGTGACACGT
GGCGTCCTCT
AAGAAAGACT
TTTATAAGAC
GTGGTGTGAC
AATTTTTAAG
CAACCTATGG
TTTGCTCAGA
CTCCTCCAAA
GTTTTTTGAG
CAAAGGAAAA
TAAGTAGGCA
GAGTGTCTGC
AAGGGGTTAA
ACCACATTTG
AAACATAAAA
AAATAAAGCA
TGTGGTTTGT
CAGCGCGGGG
AATGGTTACA
CATTCTAGTT
AC CTCTAGCT
CCGCTCACAA
TAATGAGTGA
AACCTGTCGT
ATTGGGCGCT
CGAGCGGTAT
CCTGGTCAA-A
GGAGAACAAC
CAGCAAGCTC
GATGCATGAG
ATGAGTGCGA
TGGCACGTAC
CTGCCCTGGG
CCTGAGTGGC
CAGGTGTGCC
GGATTTGCCA
CCTAGGAGCC
GTGAGCGCCC
GTAGGGACAG
CCAGCCTCGC
TGGAGGGACT
GCACTGAGGT
GCCTCACCCG
ACTCCTCGGA
GGCAGCTTCT
CCCTGCAGCC
CCACTTCCCA
GCCAGCCATC
CCACTGTCCT
CTATTCTGGG
GGCATGCTGG
CTAGGGGGTA
CGCGCAGCGT
CTTCCTTTCT
ATTAGTCAGC
GTTCCGCCCA
CCGCCTCGGC
TTTGCAAA-ZA.
AGCGTGAAGG
TCGTCGCCGT
TCAGGAACGA
AGAATCTGGT
TAAAGGACAG
ATTTTCTTGC
GTAAAGTAGA
AACCAGGCCA
TTTTCCCAGA
CTGAGGTCCA
AACAGGAAGA
CATGGGACTT
ATAATTGGAC
TGTATAATGT
AACTGATGAA
AGAAATGCCA
AAAGAAGAGA
TCATGCTGTG
AGCTGCACTG
TAACAGTTAT
TATTAATAAC
TAAGGAATAT
TAGAGGTTTT
TGAATGCAAT,
ATAGCATCAC-
CCAAACTCAT
ATCTCATGCT
AATAAAGCAA
GTGGTTTGTC
AGAGCTTGGC
TTCCACACAA
GCTAACTCAC
GCCAGCTGCA
CTTCCGCTTC
CAGCTCACTC
1500 1560 1620 1680 1740 1800 1860 1920 1980 2040 2100 2160 2220 2280 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200 4260 4320 4380 4440 4500 4560 4620 4680 4740 4800 4860 4920 49S0 5040 5100 5160 5220 5280 5340 5400 5460 a a
AAAGGCGGTA
AAAAGGCCAG
GCTCCGCCCC
GACAGGACTA
TCCGACCCTG
TTCTCAATGC
CTGTGTGCAC
TGAGTCCAAC
TAGCAGAGCG
CTACACTAGA
AAGAGTTGGT
TTGCAAGCAG
TACGGGGTCT
ATCAAAAAGG
AAGTATATAT
CTCAGCGATC
TACGATACGG
CTCACCGGCT
TGGTCCTGCA
AAGTAGTTCG
GTCACGCTCG
TACATGATCC
CAGAAGTAAG
TACTGTCATG
CTGAGAATAG
CGCGCCACAT
ACTCTCAAGG
CTGATCTTCA
AAATGCCGCA
TTTTCAATAT
ATGTATTTAG
TGACGTCGAC
AGAGTAACCT
TCTCCCC-ATC
CAGTATCTGC
GCTACAACAA
TTTGCGCT.GC
TATTAATAGT
ACATAACTTA
TCA-ATAATGP.
GTGGACTATT
ACG-CCCCCTA
ACCTTATGGG
GTGATGCGGT
CCA.AGTCTCC
TTTCCAAAAT
TGGGAGGTCT
ATCGAAATTA
(A
(B
(C
(D
(ii) (x i)
GACGGATCGG
AGTAACCTTT
TCCCGATCCC
GTATCTGCTC
TACAACAAGG
TGCGCTGCTT
ATACGGTTAT
CAAAAGGCCA
CCTGACGAGC
TAAAGATACC
CCGCTTACCG
TCACGCTGTA
GAACCCCCCG
CCGGTAAGAC
AGGTATGTAG
AGGACAGTAT
AGCTCTTGAT
CAGATTACGC
GACGCTCAGT
ATCTTCACCT
GAGTAAACTT
TGTCTATTTC
GAGGGCTTAC
CCAGATTTAT
ACTTTATCCG
CCAGTTAATA
TCGTTTGGTA
CCCATGTTGT
TTGGCCGCAG
CCATCCGTAA
TGTATGCGGC
AGCAGAACTT
ATCTTACCGC
GCATCTTTTA
AAAAAGGGAA
TATTGAAGCA
AAAATAAAC
GGATCGGGAG
TTTTTTTTAA
CCCTATC-GTC
TCCCTGCTTG
GGC.AAGGCTT
TTCGCGATGT
AATACAA'TAC
CGGTAAATGG
CGTATGTTCC
TACGGTAAAC
TT-ACC-TCA
ACTTTC'CTAI:
TTTGGCAGTA
ACCCCATTGA
GTf-GTAACAA
ATATAAGCAG
ATACGACTCA
CCACAGAATC
GGAACCGTAA
ATCACAAAAA
AGGCGTTTCC
GATACCTGTC
GGTATCTCAG
TTCAGCCCGA
ACGACTTATC
GCGGTGCTAC
TTGGTATCTG
CCGGCAAACA
GCAGAAAAAA
GGAACGAAAA
AGATCCTTTT
GGTCTGACAG
GTTCATCCAT
CATCTGGCCC
CAGCAATAAA
CCTCCATCCA
GTTTGCGCAA
TGGCTTCATT
GCAAAAAAGC
TGTTATCACT
GATGCTTTTC
GACCGAGTTG
TAAAAGTGCT
TGTTGAGATC
CTTTCACCAG
TAAGGGCGAC
TTTATCAGGG
AAATAGGGGT
ATCTGCTAGG
TTTTATTTTA
GACTCTCAGT
TGTGTTGGAG
GACCGACAAT
ACGGGCCAGA
GGGGTCATTA
CCCGCCTGGC
CA.TAGTAADCG
TGCCOACTTG
TGACGGTA-AA
TTGGCAGTAC
CATCAATGGG
CGTCAATGGG
CTCCGCCCCA
AGCTCTCTGG
CTATAGGGAG
AGGGGATAAC
AAAGGCCGCG
TCGACGCTCA
CCCTGGAAGC
CGCCTTTCTC
TTCGGTGTAG
CCGCTGCGCC
GCCACTGGCA
AGAGTTCTTG
CGCTCTGCTG
AACCACCGCT
AGGATCTCAA
CTCACGTTAA
A.AATTAAAAA
TTACCAATGC
AGTTGCCTGA
CAGTGCTGCA
CCAGCCAGCC
GTCTATTAAT
CGTTGTTGCC
CAGCTCCGGT
GGTTAGCTCC
CATGGTTATG
TGTGACTGGT
CTCTTGCCCG
CATCATTGGA
CAGTTCGATG
CGTTTCTGGG
ACGGA.AATGT
TTATTGTCTC
TCCGCGCACA
TGACCTGAGG
TTTTATTTTT
ACA.ATCTGCT
GTCGCTGAGT
TGCATGAAGA
TATACGCGTT
GTTCATAGCC
TGACCGCCCA
CrAATAGGGA
GCAGTACATC
TGC-CCCGCCT
ATCTACGTA',
CGTGGATAGC
AGTTTrGTTTT
TTGACGCAAA
CTAACTAGAG
ACCCAAGCTT
GCAGGAAAGA
TTGCTGGCGT
AGTCAGAGGT
TCCCTCGTGC
CCTTCGGGAA
GTCGTTCGCT
TTATCCGGTA
GCAGCCACTG
AAGTGGTGGC
AAGCCAGTTA
GGTAGCGGTG
GAAGATCCTT
GGGATTTTGG
TGAAGTTTTA
TTAATCAGTG
CTCCCCGTCG
ATGATACCGC
GGAAGGGCCG
TGTTGCCGGG
ATTGCTACAG
TCCCAACGAT
TTCGGTCCTC
GCAGCACTGC
GAGTACTCAA
GCGTCAATAC
AAACGTTCTT
TAACCCACTC
TGAGCAAAAA
TGAATACTCA
ATGAGCGGAT
TTTCCCCGAA
CGCGCCGGCT
GAGATGGAGT
C'rGATGCCGC
AGTGCGCGAG
Al CTGCCTTAG
GACATTGATT
CATATATGGA
ACGACCCCCG
CTTTC'CATTG
AAGTGTATCA
GGCATTATGC
TAGTCATCGC
GGTTTGACTC
GGCACCAAAA
TGGGCGGTAG
AACCCACTGC
G
ACATGTGAGC
TTTTCCATAG
GGCGAAACCC
GCTCTCCTGT
GCGTGGCGCT
CCAAGCTGGG
ACTATCGTCT
GTAACAGGAT
CTAACTACGG
CCTTCGGAA.A
GTTTTTTTGT
TGATCTTTTC
TCATGAGATT
AATCAATCTA
AGGCACCTAT
TGTAGATAAC
GAGACCCACG
AGCGCAGAAG
AAGCTAGAGT
GCATCGTGGT
CAAGGCGAGT
CGATCGTTGT
ATAATTCTCT
CCAAGTCATT
GGGATAATAC
CGGGGCGAAA
GTGCACCCAAb
CAGGAAGGCA
TACTCTTCCT
ACATATTTGA
AAGTGCCACC
TCGA.ATAGCC
TTGGCGCCGA
ATAGTTAAGC
CAAA-ATTTAA
GGTTAGGCGT
ATTGACTAGT
GTTCCGCGTT
CCCATTGACG
ACGTCAATGG
TATGCCAAGT
CCAGTACATG
TATTACCATG
ACGGGGATTT
TCAACGGGAC
GCG'TGTACGG
TTACTGGCTT
5520 5580 5640 5700 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 7140 7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 '7800 7860 7920 7980 8040 8100 8160 8220 8280 8321 2) INFORMATION FOR SEQ ID NO:13: SEQUENCE CH-ARACTERISTICS: LENGTH: 8897 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear MOLECULE TYPE: cDNA SEQUENCE DESCRIPTION: SEQ ID NO:13:
GAGATCTGCT
TTTTTTAATT
CTATGGTCGA
CCTGCTTGTG
CAAGGCTTGA
CGCGATGTAC
AGCCCGGGTG
TTATTTTATT
CTCTCAGTAC
TGTTGGAGGT
CCGACAATTG
GGGCCAGATA
ACCTGAGGCG
TTATTTTTGA
AATCTGCTCT
CGCTGAGTAG
CATGAAGAAT
TACGCGTTGA
CGCCGGCTTC
GATGGAGTTT
GATGCCGCAT
TGCGCGAGCA
CTGCTTAGGG
CATTGATTAT
GAATAGCCAG
GGCGCCGATC
AGTTAAGCCA
AAATTTAAGC
TTAGGCGTTT
TGACTAGTTA
TTAATAGTAA
ATAACTTACG
AATAATGACG
GGACTATTTA
GCCCCCTATT
CTTATGGGAC
GATGCGGTTT
AAGTCTCCAC
TCCAAAATGT
GGAGGTCTAT
CGAAATTAAT
TCCTTAGGTC
TCCTGCTTCC
TGGACAACCT
CACCTATCTG
AGTTTCCAAC
TTTCACACTC
GGGTTCACAT
TCGAGTCTCT
CGTGGCCATT
CCTCAGAATG
GGAAGCTAGG
ATAATTATCT
ACAACACACC
AGGAACTGTG
TGGAACTGCC
GTGGAAGGTG
GAGCAAGGAC
GAAACACAAA
GAGCTTCAPAC
CCTC-ACCCCC
GCGGTCCTCC
AATGTTGGAG
TCATTTAATA
AATATGTAGT
CCCTATCATC
CCCCTGGGCC
TAGTCCTTTT
?.ATCAACCAA
AACATGATAT
TTITAAGTTCA
CAGGTACTGA
TA.ATCCACAC
AGCTGAGAGA
CCACCCACCA
TTGGAAATAG
ATTAGAATAC
TCTCATAAAA
TCATCCATAT
TCTTAGCTGG
TTGGTAATGT
TACACATTAT
GAAGAGGAAT
ATAGCTACCT
AGGTGCTCAA
CTAGGAGCAC
AGAATTAACC
GGGAAGGGCA
CTCTCAGCTA
AAGGGGTTCA
TCCTGCTTTG
AACTACATAA
TTTCAAACTT
AACTTGCTCA
65 ATGAATTCTT
TTCTATAGTG
GCCAGCCATC
TCAATTACGG
GTAAATGGCC
TATGTTCCCA
CGGTAAACTG
GACGTCAATG
TTTCCTACTT
TGGCAGTACA
CCCATTGACG
CGTAACAACT
ATAAGCAGAG
ACGACTCACT
TCGAGCACCA
AGCAGTGATG
GCGTCCATCT
GAATGGTACC
CGATTTTCTG
AAGATCAGCA
GTTCCATTCA
AGATAACCGG
CTTTGCCTAA
GCTGCAAAGA
AAGAAACTCA
GGGATAAGCA
CAAGGGCAGA
GCTGCACCAT
TCTGTTGTGT
GATAACC-CCC
AGCACCTACA
GTCTACGCCT
AGGGG~AGAGT
TCCCATCCTT
AGCTCATC-7
GAGAATGAAT
ATTATTATCT
CATCCTAAGG
CTCTGCAAGA
ATGC-TAGGAG
TAAGGGTGAC
AGCAAAT--T
AAAATAACAA
TCATGGTACT
GGGACTCCTG
TATACTGTGA
CAAATATATT
ZJAAACTATG
CCCGATTGTC
CCAATGAGGA
ATAATGTTAC
AAAGTTCAAA
GGGTGGGCGA
TCTGTTCCTC
GCTTCAAAAT
AAGTAATAGG
GCCTAATCCT
CAAAACAACA
ACATACATAG
TTGCCCAGAC
CATGTAAATG
CTCATCCATC
GGAGTAACTA
TTTTTCTTTC
GGAAGCACCT
TGGAGGTTTG
CTCATCCCTG
GCGGCCGCTT
TCACCTAAAT
TGTTGTTTGC
GGTCATTAGT
CGCCTGGCTG
TAGTAACGCC
CCCACTTGGC
ACGGTAAATG
GGCAGTACAT
TCAATGGGCG
TCAATGGGAG
CCGCCCCATT
CTCTCTGGCT
ATAGGGAGAC
TGAAGTTGCC
TTGTCATGAC
CTTGCAGATC
AGCAGAGACC
GGGTCCCAGA
GAGTGGAGGC
CGTTCGGCCA
TCAATCGATT
AGCATTGAGT
GCTCCAACAA
AAACATCAAG
TGCTGTTTTC
ACTT'rGTTAC
CTGTCTTCAT
GCCTGCTGAA
TCCAATCGGG
GCCTCAGCAG
GCGAAGTCAC
GTTAGAGGGA
TGGCCTCTGA
TCACCTCACC
AAATAAAGTG
GTTGTTTTAC
CACGTAACCA
CAGTCCTCCC
AGACTTGCTT
AGGTCTTACA
TCAAAAGAAG
CACAATAAAA
TAGACTTAAT
TCTGCCAAGG
CATTAAAAAC
CTATAACTCA
CAAGAATGTT
CAACAATAGA
GAATTAACAA
ATAAGAGAAA
ACCAGGTAAA
GTTAGTGCCT
GTGTGGGGTT
AACTTCACAT
TCAAGACCAA
GCCC'RCTTGA
GGCCTGCTAT
AAATTAAATG
ACTGGAAACC
AGGACTCTTC
CAACACACCT
ACACAGCATC
CAGTCAGTAC
TGCCCTTCTG
AGTAGGGGTG
GGGGCCAAAT
GCTAGCTTCA
GCTAGAGCTC
CCCTCCCCCG
TCATAGCCCA
ACCGCCCAAC
AATAGGGACT
AGTACATCAA
GCCCGCCTGG
CTACGTATTA
TGGATAGCCG
TTTGTTTTGG
GACGCAAATG
AACTAGAGAA
CCAAGCTTGG
TGTTAGGCTG
CCAAACCCCA
TAGTCAGATC
AGGGCAGTCT
CAGGTTCAGC
TGAGGATGTG
AGGGACAAAG
GGAATTCTAA
TTACTGCAAG
AACAATTTAG
ATTTTAAATA
TGTCTGTCCC
TTAAACACCA
CTTCCCGCCA
TAACTTCTAT
TAACTCCCAG
CACCCTGACG
C-ATCAGGGC
GAAGTGCCCC
CCCTTTTTCC
CCCCTCCTCC
AAkTCTTTGCA
CAACTACTCA
TTTATAAAPA
TCAAACCCAC
CCTTGTTTTC
GTCATATIATC
AAACCTGCTA
GCAATTAAAT
GGAATGTCAT
GCCGTATGA
ATTCATTAAA
GCAATCCCAC
CAAAGCAGCT
ATGAGTTATT
GCTACAACTA
CTCAATGCAA
AATAAAGTTA
GGGAGAAC-AC
GTGCAGTTAT
AAAGAACATC
CGCAGCTGGT
GCCCTGAATG
TTTCCTG(CA
AAACAGACCT
CATGTATGAA
CTCATTCTAT
TTCTAAGTAC
CCTTCCCTCA
TGGGAAAGTG
CCTCTTGAGA
AGACTCAGTA
TGAACAATCA
CGTGTTGGAT
GCTGATCAGC
TGCCTTCCTT
TATATGGAGT
GACCCCCGCC
TTCCATTGAC
GTGTATCATA
CATTATGCCC
GTCATCGCTA
TTTGACTCAC
CACCAAAATC
GGCGGTAGGC
CCCACTGCTT
TACCAATTTA
TTGGTGCTGA
CTGTCCAGTC
ATTGTACATA
CCACGGC'rCC
GGCAGTGGAG
GGAGTTTACT
TTGGAAATCA
ACTCTGAGGG
GTCAGAAAAG
AACTTTATTA
CGCTTCTTGG
TAACATGCCC
TCCTGTTTGC
TCTGATGAGC
OCCAGAGAGG
GAGAGTGTCA
CTGAC-CAAAG
CTGAGCTCGC
CACCTGCTCC
ACAGGGGACC
TCCTTGGCTT
CCTGTGGTTT
ATTTCTCTTA
TCATCCTTCA
AAGCCTTCTG
CCCTCCTCAG
CTTTGATTCA
TAAAGAGAAT
AAACAAACAA
GCCTTATTTA
GTACTTTCCA
ATGTTGCAA.A
TTCTAGATGA
TTATTTACAA
AAACTGTGGT
TACCTACTCA
AAGATATGTT
GAAATTTGGA
AAGAAGGGGC
GATCTGTGCA
TTATACCCAG
AAGTGGGGGC
AGTCTGCCTT
TCTGTGCCCT
TCAGCA.AGGG
CACTCACATG
GGGGCACTCT
CTCTCTCTGC
AATGACTGAC
GGGAAGGACA
ATGTTGATGA
ATGTCCCTTC
AAGGCAGGCA
CCAACCGCGG
CTCGACTGTG
GACCCTGGAA
TCCGCGTTAC
CATTGACGTC
GTCAATGGGT
TGCCAAGTAC
AGTACATGAC
TTACCATGGT
GGGGATTTCC
ALACGGGACTT
GTGTACGGTG
ACTGGCTTAT
AATTGATATC
TGTTCTGGAT
CTGTCACGCT
ATAATGGCAA
TGATCTACAA
CTGGGACAGA
ACTGCTTCCA
AACGTAAGTC
GGTCGGATGA
CATGCAAAGC
AGGAATAGGG
TCTCCTTGCT
TTATCCGCAA
TTCTT'TCCTC
AGTTGAAATC
CCAAAGTACA
CAGAGCAGGA
CAGACTACGZL
CCGTCACAAA
TCAGTTCCAG
TACCCCTATT
TAATTATGCT
CTCTCTTTCC
TAAGGGACTA
TTCTATTTTA
TCC-TCACArT
CAAGCCCTCA
ATTCCCTGAG
CATTCATTGC
TAGGGAAATG
CATTTTTAAA
CAACCTAATT
GGTTCTATA.A
CTGAGTGTCC
AAGCCAAAAA
ATGTTTATAC
CACAGATGAA
CTGTATGTTT
TGGAAATTAC
TTCTGGGGTC
CTGTTCTGTA
TTAATAGATA
CTGGGATCAA
CCAGGGCTCA
GTTTGGCTAG
GACAGAGGAC
TTTGGGAAGG
GGCCCTGC-C
CTACACTCTG
AATCCCTTTG
GTCATGGAGA
GTATCAAATC
CAATGACATG
TAATCCAGTT
AAGGGCCCTA
CCTTCTAGTT
GGTGCCACTC
420 480 540 600 660 720 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 1500 1560 1620 1680 1740 1800 1860 1920 1980 2040 2100 2160 2220 2280 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 294C 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200 4260 4320 4380 I. 4 4 4 4 CCACTGTCCT TTCCTAATAA CTATTCTGGG GGGTGGGGTG GGCATGCTGG GGATGCGGTG CTAGGGGGTA TCCCCACGCG CGCGCAGCGT GACCGCTACA CTTCCTTTCT CGCCACGTTC ATTAGTCAGC AACCATAGTC GTTCCGCCCA TTCTCCGCCC CCGCCTCGGC CTCTGAGCTA TTTGCAAAA GCTTGGACAG AGCGTGAAGG CTGGTAGGAT TCGTCGCCGT
GTCCCAAAAT
TCAGGAACGA
GTTCAAGTAC
AGAATCTGGT GATTATGGGT TAAAGGACAG AATTAATATA ATTTTCTTGC CAAAAGTTTG GTAAAGTAGA CATGGTTTGG AACCAGGCCA CCTTAGACTC TTTTCCCAGA AATTGATTTG CTGAGGTCCA GGAGGAAAAA AACAGGAAGA TGCTTTCAAG CATGGGACTT TTGCTGGCTT ATAATTGGAC AAACTACCTA TGTATAATGT GTTAAACTAC AACTGATGAA TGGGAGCAG1 AGAAATGCC-A TCTAGTGATG AAAGAAGAGA AAGGTAGAAG TCATGCTGTG TTTAGTAATA AGCTGCACTG CTATACAA.GA TAACAGTTAT AATCATAACA TATTAATAAC TATGCTCAAA TAAGGAATAT TTGATC-TATA TAGAGGTTTT ACTTGCTTTA TGAATGCAAT TGTTGTTGTT ATAGCATCAC AAATTTCACA CCAA.ACTCAT CAATGTATCT ATCT".CATGCT GGAGTTCTTC AATAAAC-CPAA TAGCATCACA C-TGGTTTGTC CAAACTCATC AGAGCTTC-GC GTAATCA'rGG TTCCACACAA CATACGAGCC GCTAACTCAC ATTAATTGCG GCCAGCTGCA TTAATGAATC cTrTCCGCTTC CTCGCTCACT CAGCTCACTC kAAGGCGGTA ACATGT'GAGC' AAAAGGCCAG TTTTCCATAG GCTCCGCCCC GGCGAAACCC GACAGGACTA GCTCTCCTGT TCCGACCCTG 50 GCGTGGCGCT TTCTCAATGC CCAAGCTGGG CTGTGTGCAC ACTATCGTCT TGAGTCCAAC GTAACAGGAT TAGCAGAGCG CTAACTACGG CTACACTAGA 55 CTT:GAAA AAGAGTTGGT GTTTTTTTGT TTGCAAGCAG TGATCTTTTC TACGGGGTCT TCATGAGATT ATCAAAAAGG AATCAATCTA AAGTATATAT AGGCACCTAT CTCAGCGATC TGTAGATAAC TACGATACGG GAGACCCACG CTCACCGGCT AGCGCAGAAG TGGTCCTGCA AAGCTAGAGT AAGTAGTTCG 65 GCATCGTGGT GTCACGCTCG CAAGGCGAGT TACATGATCC CGATCGTTGT CAGAAGTAAG
AATGAGGAA
GGGCAGGACA
GGCTCTATGG
CCCTGTAGCG
CTTGCCAGCG
GCCGGGCCTC
CCGCCCCTAA
CATGGCTGAC
TTCCAGAAGT
CTCAGGGCTG
TTTATCCCCG
ATGGGGATTG
TTCCAAAGAA
AGGAAAACCT
GTTCTCAGTA
GATGATGCCT
ATAGTCGGAG
TTTGTGACAA
GGGAAATATA
GGCATCAAGT
TTCTCTGCTC
TAGATCTCTT
CAGAGATTTA
TGATTCTAAT
GGTGGAATGC
ATGAGGCTAC
ACCCCAAGGA
.GAZACTCTTGC
AAATTATC-GA
TACTGTTTTT
AATTGTGTAC
GT GCCTTGAC
AAAAACCTCC
.AACTTGTTTA
AATAAAGCAT
TATCATGTCT
GCCCACCCCA
AATTT CACAA
AATGTATCTT
TCATAGCTGT
GGAAGCATAA
TTGCGCTCAC
GGCCAACGCG
GACT'-GCTGC
ATACGGTTAT
CAAAAGGCCA
CCTGACGAGC
TAAAGATACC
CCGCTTACCG
TCACGCTGTA
GAACCCCCCG
CCGGTAAGAC
AGGTATGTAG
AGGACAGTAT
AGCTCTTGAT
CAGATTACGC
GACGCTCAGT
ATCTTCACCT
GAGTAAACTT
TGTCTATTTC
GAGGGCTTAC
CCAGATTTAT
ACTTTATCCG
CCAGTTAATA
TCGTTTGGTA
CCCATGTTGT
TTGGCCGCAG
TTGCATCGCA
GCAAGGGGGA
CTTCTGAGGC
GCGCATTAAG
CCCTAGCGCC
TCAAAAAAGG
CTCCGCCCAT
TAATTTTTTT
AGTGAGGAGG
CGATTTCGCG
CTGCCATCAT
GCAAGAACGG
TGACCACAAC
GGTTCTCCAT
GAGAACTCAA
TAAGACTTAT
GCAGTTCTGT
GGATCATGCA
AACTTCTCCC
ATAAGTTTGA
CCCTCCTAAA
TGTGAAGGAA
AAGCTCTAAG
TGTTTGTGTA
CTTTAATGAG
TGC-TGACTCT
CTTTCCTTCA
TTGCTTTGCT
AAAATATTCT
TCTTACTCCA
CTTTAGCTTT
TAGAGATCAT
CACACCTCCC
TTGCAGCTTA
TTTTTTCACT
GGATCGGCTG
ACTTGTTTAT
ATAJAAGCATT
ATCA.TCTCTG
TTCCTGTGTG
AGTGTA-BAGC
TGCCC:C:CTTT
CGC-GGAGAGG
GCTCGGTCGT
CCACAGAATC
GGAACCGTAA
ATCACAAAAA
AGGCGTTTCC
GATACCTGTC
GGTATCTCAG
TTCAGCCCGA
ACGACTTATC
GCGGTGCTAC
TTGGTATCTG
CCGGCAAACA
GCAGAAAAAA
GGAACGAAAA
AGATCCTTTT
GGTCTGACAG
GTTCATCCAT
CATCTGGCCC
CAGCAATAAA
CCTCCATCCA
GTTTGCGCAA
TGGCTTCATT
GCAAAAAAGC
TGTTATCACT
TTGTCTGAGT
GGATTGGGAA
GGAAAGAACC
CGCGGCGGGT
CGCTCCTTTC
GAAAAAAAGC
CCCGCCCCTA
TATTTATGCA
CTTTTTTGGA
CCAAACTTGA
GGTTCGACCA
AGACCTACCC
CTCTTCAGTG
TCCTGAGAAG
AGAACCACCA
TGAACAACCG
TTACCAGGAA
GGAATTTGAA
AGAATACCCA
AGTCTACGAG
GCTATGCATT
CCTTACTTCT
GTAAATATAA
TTTTAGATTC
GAAAACCTGT
CAACATTCTA
GAATTGCTAA
ATTTACACCA
GTAACCTTTA
CACAGGCATA
TTAATTTGTA
AATCAGCCAT
CCTGAACCTG
TA-ATGGTTAC
GCATTCTAGT
GATGATCCTC
TGCAGCTTAT
TTTTTCACTG
TATACCGTCG
AAATTGTTAT
CTGGGGTGCC
CCAGTC-GGGA
CGGTTTGCGT
TCGGCTGCGG
AGGGGATAAC
AAA.GGCCGCG
TCGACGCTCA
CCCTGGAAGC
CGCCTTTCTC
TTCGGTGTAG
CCGCTGCGCC
GCCACTGGCA
AGAGTTCTTG
CGCTCTGCTG
A-ACCACCGCT
AGGATCTCAA
CTCACGTTAA
AAATTAAAAA
TTACCAATGC
AGTTGCCTGA
CAGTGCTGCA
CCAGCCAGCC
GTCTATTAAT
CGTTGTTGCC
CAGCTCCGGT
GGTTAGCTCC
CATGGTTATG
AGGTGTCATT
GACAATAGCA
AGCTGGGGCT
GTGGTGGTTA
GCTTTCTTCC
ATGCATCTCA
ACTCCGCCCA
GAGGCCGAGG
GGCCTAGGCT
CGGCAATCCT
TTGAACTGCA
TGGCCTCCGC
GAAGGTAAAC
AATCGACCTT
CGAGGAGCTC
GAATTGGCAA
GCCATGAATC
AGTGACACGT
GGCGT-CTCT
AAGAAAACT
TTTATAAGAC
GTGGTGTGAC
AATTTTTAAG
CAACCTATGG
TTTGCTCAGA
CTCCTCC-AA
GTTTTTTGAG
CAAAGGAAA.A
TAAGTAGGCA
GAGTGTCTGC
AAGGC-GTT'A
ACCACATTTG
AAACATAAAA
AAATAAAGCA
TGTGGTTTGT
CAGCGCCGGG
AATGGTTACA
CATTCTAGTT
ACCTCTAGCT
=CCTCACAA4
TAATGAGTGA
AACCTGTCGT
ATT-GcCGCr
CGAGCGGTAT
GCAGGAAAc3A
TTGCTGGCGT
AGTCAGAGGT
TCCCTCGTGO
CCTTCGG-A.A
GTCGTTCGCT
TTATCCGGTA
GCAGCCACTG
AAGTGGTGGC
AAGCCAGTTA
GGTAGCGGTG
GAAGATCCTT
GGGATTTTGG
TGAAGTTTTA
TTAATCAGT'
CTCCCCGTC3
ATGATACCGC
GGAAGGGCCG
TGTTGCCGGG
ATTGCTACAG
TCCCAACGAT
TTCGGTCCTC
GCAGCACTGC
4440 4500 4560 4620 4680 4740 4800 4860 4920 4980 5040 5100 5160 5220 5280 5340 5400 5460 5520 5580 5640 5700 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 7140 7200 7260 7320 7380 7440 7500 7560 1620 7680 ;740 7800 7860 '7920 7980 8040 8100 8160 8220 8280 8340 8400 9 9 9 9* 9 *.*999 9
U.
ATAATTCTC'r TACTGTCATG CCATCCGTA GATGCTTTTC TGTGACTGGT
GAGTACTCAA
CCAAGTCATT CTGAGAATAG TGTATGCGGC GACCGAGTTG CTCTTGCCCG
GCGTCAATAC
GGGATAATAC CGCGCCACAT AGCAGAACTT TAAAAGTGCr CATCATTGGA
AAACGTTCTT
CGGGGCGAAA ACTCTCAAGG ATCTTACCGC TGTTGAGATC CAGTTCGATG
TAACCCACTC
GTGCACCCAA CTGATCrTCA GCATCTTTTA CTTTCACCAG CGTTTCTGGG
TGAGCAAAA
CAGGAAGGCA AAATGCCGCA AAAAAGGGAA TAAGGGCGAC ACGGAAATGT
TGAATACTCA
TACTCTTCCT TTTTCAATAT TATTGAAGCA TTTATCAGGG TTATTGTCTC
ATGAGCGGAT
ACATATTTGA ATGTATTTAG AAAAATAAAC AAATAGGGGT TCCGCGCACA
TTTCCCCGA
AAGTGCCACC
TGACGTC
INFORMIATION FOR SEQ ID NO:14: SEQUENCE
CHARACTERISTICS:
LENGTH: 44 base pairs TYPE: nucleic acid STRANDEDNESS. single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:l4: GAAGAGGAAG ACTGACGGTG CCCCCGCGAG TTCAGGTGCT
GAGG
INFORMATION FOR SEQ ID SEQUENCE
CHARACTERISTICS:
LENGTH: 44 base pairs TYPE: nucleic acid STRAkNEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cONA (xi) SEQUENCE DESCRIPTION: SEQ ID CCTCAGCACC TGACTCGCG GGGGCACCGT CAGTCTTCCT
CTTC
INFORMATION FOR SEQ ID NO:16: SEQUENCE CHAkRACTERISTICS: LENGTH: 51 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA 50 (xi) SEQUENCE DESCRIPTION: SEQ ID NO:16: CTGGGAGGGC TTTGTTGGAG ACCGAGCACG AGTACGACTT GCCATTCAGC
C
INFORKATION FOR SEQ ID NO 55 SEQUENCE
CHARACTERISTICS:
LENGTH: 30 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:17: 65 GATGGTTTTC TCGATGGCGG
CTGGGAGGGC
INFORMATION FOR SEQ ID NO:18: 8460 8520 8580 8640 8700 8760 8820 8880 8897 SEQUENCE CHARACTERISTICS: LENGTH: 30 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:18: GCCCTCCCAG CCGCCATCGA GAAAACCATC INFORMATION FOR SEQ ID NO:19: SEQUENCE CHARACTERISTICS: LENGTH: 34 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:19: GATGGTTTTC TCGATAGCGG CTGGGAGGGC TTTG 34 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 91 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID GATGGTTTTC TCGATGGCGG CTGGGAGGGC TTTGTTGGAG ACCGAGCACG AGTACGACTT GCCATTCAGC CAGTCCTGGT G 81 S. 2) INFORMATION FOR SEQ ID NO:21: 45 SEQUENCE CHARACTERISTICS: LENGTH: 81 base oairs TYPE: nucleic acid STRANDEDNESS: single S(D) TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:21: o""o 55 CACCAGGACT GGCTGAATGG CAAGTCGTAC TCGTGCTCGG TCTCCAACAA AGCCCTCCCA GCCGCCATCG AGAAAACCAT C 81 INFORMATION FOR SEQ ID NO:22: SEQUENCE CHARACTERISTICS: LENGTH: 8690 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear S (ii) MOLECULE TYPE: cDNA *i (xi) SEQUENCE DESCRIPTION: SEQ ID NO:22:
GGTACCAATT
TTGGAATTCT
TGTCCTTGTT
AGTGCAGCCT
CTATTACATG
TAGTCAAGAT
CAGAGACAAT
AGCCGTGTAT
AGGGACTCTG
ACCCTCCTCC
CTTCCCCGAA
CTTCCCGGCT
CTCCAGCAGC
CAAGGTGGAC
CCAGGCTCAG
AGGCAGGCCC
AGAGGGTCTT
CAGGCCCTGC
AGGACCCTGC
GACACCTTCT
CTTGTGACAA
CCAGCTCAAG
GGTGCTGACA
GTCTTCCTCT
ACATGCGTGG
GACGGCGTGG
TACCGTGTGG
AAGTGCAAGG
AAAGGTGGGA
TGCCCTGAGA
GGTGTACACC
CCTGGTCAAA
GGAGAACAAC
CAGCAAGCTC
C-ATGCATGAG
ATGAGTGCGA
TGGCACGTAC
CTGCCCTGGG
CCTGAGTGGC
CAGGTGTGCC
GGATTTGCCA
CCTAGGAC-CC
GTGAGCGCCC
GTAGGGACAG
CCAGCCTCGC
TGGAGGGACT
GCACTGAGGT
50 GCCTCACCCG
ACTCCTCGGA
GGCAGC7TCT
CCCTGCAGCC
CCACTTCCCA
55 GCCAGCCATC
CCACTGTCCT
CTATTCTGGG
GGCATGCTGG
CTAGGGGGTA
CGCGCAGCGT
CTTCCTTTCT
ATTAGTCAGC
GTTCCGCCCA
CCGCCTCGGC
65 TTTGCAAAAA
AGCGTGAAGG
TCGTCGCCGT
TAAATTGATA
TGCGGCCGCT
TTAAAAGGTG
GGAGGGTCCC
TATTGGGTTC
GGTGATATAA
GCAAAGAACA
TACTGTGCAA
GTCACGGTCT
AAGAGCACCT
CCGGTGACGG
GTCCTACAGT
TTGGGCACCC
AAGAAAGTTG
CGCTCCTGCC
CGTCTGCCTC
CTGGCTTTTT
ACACAAAGGG
CCCTGACCTA
CTCCTCCCAG
AACTCACACA
GCGGGACAGG
CGTCCACCTC
TCCCCCCAAA
TGGTGGACGT
AGGTGCATAA
TCAGCGTCCT
TCTCCAACAA
CCCGTGGGGT
GTGACCGCTG
CTGCCCCCAT
GGCTTCTATC
TACAAGACCA
ACCGTGGACA
GC-TCTGCACA
CGGCCGGCAA
CCCCTlGTACA
CCCCTGCGAC-
ATGAGGGAGG
TGGGCCCCCT
GCGTGOGCCCT
CCTGGGGACA
CTGTCCTCCC
GCCCTCCCTC
ACCCGCATGG
GGTGCAGATG
TGGCCGGCCA
GGCGAACTGC
CACAGGCCCC
CCACATGCTG
GCCACACACA
GTGCCGCCCT
TGTTGTTTGC
TTCCTAATAA
GGGTGGGGTG
GGATGCGGTG
TCCCCACGCG
GACCGCTACA
CGCCACGTTC
AACCATAGTC
TTCTCCGCCC
CTCTGAGCTA
GCTTGGACAG
CTGGTAGGAT
GTCCCAAAAT
TCTCCTTAGG
TGCTAGCCAC
TCCAGTGTGA
TGCGACTTTC
GCCAGGCTCC
CCGACTATGC
GCCTGTACCT
GAGGCCTGGC
CTTCCGCTAG
CTGGGGGCAC
TGTCGTGGAA
CCTCAGGACT
AGACCTACAT
GTGAGAGGCC
TGGACGCATC
TTCACCCGGA
CCCCAGGCTC
GCAGGTGCTG
AGCCCACCCC
ATTCCAGTAA
TGCCCACCGT
TGCCCTAGAG
CATCTCTTCC
ACCCAAGGAC
GAGCCACGAA
TGCCAAGACA
CACCGTCCTG
AGCCCTCCCA
GCGAGGGCCA
TACCAACCTC
CCCGGGATGA
CCAGCGACAT
CGCCTCCCGT
AGAGCA(GG
ACCACTACAC
C-CCCCCGCTC
TACTTCCCGG
A'CTGTGATGG
CAGAGCGGGT
AGGGTGGGGC
CC CT CCAGCA
GACACACAGC
GACCTCCATG
ACCCATCTAC
GGACACAACC
CC-CACACACA
CACGGCCACC
ACAGCACCCA
CACGAGCCCC
ACCTGCTCAG
CACAGGGGAT
TCCCTGCAGG
CCCTCCCCCG
AATGAGGAAA
GGGCAGGACA
GGCTCTATGG
CCCTGTAGCG
CTTGCCAGCG
GCCGGGCCTC
CCGCCCCTAA
CATGGCTGAC
TTCCAGAAGT
CTCAGGGCTG
TTTATCCCCG
ATGGGGATTG
TCTCGAGTCT
CATGGAGTTG
AGTGCAACTG
CTGTGCTGCA
AGGCAAGGGN
AGACTCCGTA
GCAAATGAAC
GGACGGGGCC
CACCAAGGGC
AGCGGCCCTG
CTCAGGCGCC
CTACTCCCTC
CTGCAACGTG
AGCACAGGGA
CCGGCTATGC
GGCCTCTGCC
TGGGCAGGCA
GGCTCAGACC
AAAGGCCAAA
CTCCCAATCT
GCCCAGGTAA
TAGCCTGCAT
TCAGCACC",G
ACCCTCATGA
GACCCTGAGG
AAGCCGCGGG
CACCAGGACT
GCCCCCATCG
CATGGACAGA
TC-TCCCTACA
GCTGACCAAG
CGCCGTGGAG
GCTLGGACT.CC
GCAGCAGGGG
GCAC-AAGAGC
CCCGGGCTCT
GCGCCCAGCA
TTCTTTCCAC
CCCACTGTCC
TCAC-CCAGGG
GCACCTGCCC
CCCTGCCTCT
CCCACTCGGG
CCCCACGGCA
GACTCCGGGG
CACTCAGCCC
ACACACACAC
GACCAGAGCA
ACGCGGCACC
ACAAACCCAG
CACACACCAC
ACGGATCAGC
TGCCTTCCTT
TTGCATCGCA
GCAAGGGGGA
CTTCTGAGGC
GCGCATTAAG
CCCTAGCGCC
TCAAAAAAGG
CTCCGCCCAT
TAATTTTTTT
AGTGAGGAGG
CGATTTCGCG
CTGCCATCAT
GCAAGAACGG
CTAGATAACC
TGGTTAAGCT
GTGGAGTCTG
TCTGGATTCC
CTGGAGTGGG
AAGGGTCGAT
AGCCTGAGGG
TGGTTTGCTT
CCAT CGGT CT
GGCTGCCTGG
CTGACCAGCG
AGCAGCGTGG
AATCACAAGC
GGGAGGCTGT
AGCCCCAGTC
CGCCCCACTC
CAGGCTAGGT
TGCCAAGAGC
CTCTCCACTC
TCTCTCTGCA
GCCAGCCCAG
CCAGGGACAG
AACTCCTGGG
TCTCCCGGAC
TCAAGTTCAA
AGGAGCAGTA
GGCTGAATGG
AGAAAACCAT
GGCCGGCTCG
GGGCAGCCCC
AACCAGGTCA
TGGGAGAGCA
GACGGCTCCT
AACGTCTTCT
CTCTCCCTGT
CGCGGTCGCA
TGGAAATA-AA
GGGTCAGGCC
CCACACTGGC
GCTGCCCTCG
TGC-GCTGGGC
GTAGGAGACT
GGCATGCCTA
CTAACCCCTG
ACATGCACTC
AGACCCGTTC
GTGCACGCCT
AGGTCCTCGC
TCAAGGCCCA
CCCTCCTCTC
GTCACGTCCC
CTCGACTGTG
GACCCTGGAA
TTGTCTGAGT
GGATTGGGAA
GGAAAGAACC
CGCGGCGGGT
CGCTCCTTTC
GAAAAAAAGC
CCCGCCCCTA
TATTTATGCA
CTTTTTTGGA
CCAAACTTGA
GGTTCGACCA
AGACCTACCC
GGTCAATCGA
TGGTCTTCCT
GGGGAGGCTT
CGTTCAGTGA
TCTCATACAT
TCACCATCTC
ACGAGGACAC
ACTGGGGCCA
TCCCCCTGGC
TCAAGGACTA
GCGTGCACAC
TCACCGTGCC
CCAGCAACAC
CTGCTGGAAG
CAGGGCAGCA
ATGCTCAGGG
GCCCCTAACC
CATATCCGGG
CCTCAGCTCG
GAGCCCAAAT
GCCTCGCCCT
GCCCCAGCCG
GGGACCGTCA
CCCTGAGGTC
CTGGTACGTG
C.AACAGCACG-
CAAGGAGTAC
CTCCAAAGCC
GCCCACCCTC
GAGAACCACA
GCCTGACCTG
ATGGGCAGCC
TCTTCCTCTA
CATGCTCCGT
CTCCGGG-.A
CGAGGATGCT
GCACCCAGCG
GAGTCTGG
CCAGGCTGTG
GCAGGGTGGG
CACGGGAAGC
GTCCTGTTCT
GTCCATGTGC
GCTGCCCTGC
TCGGGCCCTG
AACAAACCCC
CACACACGGA
ACACGTGAAC
CGAGCCTCTC
ACAAGGGTGC
TGGCCCTGGC
CCTTCTAGTT
GGTGCCACTC
AGGTGTCATT
GACAATAGCA
AGCTGGGGCT
GTGGTGGTTA
GCTTTCTTCC
ATGCATCTCA
ACTCCGCCCA
GAGGCCGAGG
GGCCTAGGCT
CGGCAATCCT
TTGAACTGCA
TGGCCTCCGC
120 180 240 300 360 420 480 540 600 660 720 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 1500 1560 1620 1680 1740 1800 1960 1920 1980 2040 2100 2160 2220 2290 2340 2400 2460 2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900
TCAGGAACGA
AGAATCTGGT
TA.AAGGACAG
ATTTTCTTGC
GTAAAGTAGA
AACCAG4GCCA
TTTTCCCAGA
CTGAGGTCCA
AACAGGAAGA
CATGGGACTT
ATAATTGGAC
TGTATAATGT
AACTGATGAA
AGAAATGCCA
AAAGAAGAGA
TCATGCTGTG
AGCTGCACTG
TAACAGTTAT
TATTAATAAC
TAAGGAATAT
TAGAGGTTTT
TGAATGCAAT
ATAGCATCAC
CCAAACTCAT
ATCTCATGCT
AATAAAGCA
GTGGTTTGTC
AGAGCTTGGC
TTCCACACAA
GCTAACTCAC
GCCAGCTGCA
CTTCCGCTTC
C.AGCT CACTC
ACATGTGAGC
TTTTCCATAG
GGCGAAACCC
GCTCTCCTGT
GCGTGGCGCT
CCAAGCTGC-G
ACTATCGTCT
GTAACAGGAT
CTAANCTACGG
CCTTCGGAAA
GTTTTTTTGT
TGCATCT-TTTC
TCATGAGATT
AATCAATCTA
AGGCACCTAT
TGTAGATAAC
50 GAGACCCACG
AGCGCAGAAG
AAGCTAGAGT
GCATCGTGGT
CAAGGCGAGT
55 CGATCGTTGT
ATAATTCTCT
CCAAGTCATT
GGGATAATAC
CGGGGCGAAA
GTGCACCCAA
CAGGAAGGCA
TACTCTTCCT
ACATATTTGA
AAGTGCCACC
65 TCGAATAGCC
TTGGCGCCGA
ATAGTTAAGC
GTTCAAGTAC
GATTATGGGT
AATTAATATA
CAAAAGTTTG
CATGGTTTGG
CCTTAGACTC
AATTGATTTG
GGAGGAAAAA
TGCTTTCA6AG
TTGCTGGCTT
AAACTACCTA
GTTAAACTAC
TGGGAGCAGT
TCTAGTGATG
AAGGTAGAAG
TTTAGTAATA
CTATACAAGA
AATCATAACA
TATGCTCAAA
TTGATGTATA
ACTTGCTTTA
TGTTGTTGTT
AAATTTCACA
CAATGTATCT
GGAGTTCTTC
TAGCATCACA
CAAACTCATC
GTAATCATGG
CATACGAGCC
ATTAATTGCG
TTAATGAATC
CTCGCTCACT
AAAr2GC-G'rA
AAAAGGCCAG
GCTLCCGCCCC
GACAGGACTA
TCCGACCCTG
TTCTCAATGC
CTGTGTGCAC
TGAGTCCAAC
T.AGCAGAGCG
CTACACTAGA
ANAGAGTTGGT
TTGCAAGCAG
TACGGGGTCT
ATCAAAAAGG
AAGTATATAT
CTCAGCGATC
TACGATACGG
CTCACCGGCT
TGGTCCTGCA
AAGTAGTTCG
GTCACGCTCG
TACATGATCC
CAGAAGTAAG
TACTGTCATG
CTGAGAATAG
CGCGCCACAT
ACTCTCAAGG
CTGATCTTCA
AAATGCCGCA
TTTTCAATAT
ATGTATTTAG
TGACGTCGAC
AGAGTAACCT
TCTCCCGATC
CAGTATCTGC
TTCCAAAGAA
AGGAAAACCT
GTTCTCAGTA
GATGATGCCT
ATAGTCGGAG
TTTGTGACAA
GGGAAATATA
GGCATCAAGT
TTCTCTGCTC
TAGATCTCTT
CAGAGATTTA
TGATTCTAAT
GGTGGAATGC
ATGAGGCTAC
ACCCCAAGGA
GAACTCTTGC
AAATTATGGA
TACTGTTTTT
AATTGTGTAC
GTGCCTTGAC
AAAAACC'rCC
AACTTGTTTA
AATAAAGCAT
TATCATGTCT
GCCCACCCCA
AATTTCACAA
AATGTATCTT
TCATAGCTGT
GGAAGCATAA
T'rGCGCTCAC
GGCCAACG:CG
GACTCGCTGC
ATACGGTTAT
CAAAAGGCCA
CCTGACGAGC
TAAAGATACC
CCGCTTACCG
TCACGCTGTA
GAACCCOCCG
CCGGTPAAGAC
tAGGTATGTAG
AGGACAGTAT
AGCTCTTGA-,
CAGATTACGC
GACGCTCAGT
AT-TTCACCT
GAGTAAACTT,
TGTCTATTTC
GAGGGCTTAC
CCAGATTTAT
ACTTTATCCG
CCAGTTAATA
TCGTTTGGTA
CCCATC.TTGT
TTGGCCGCAG
CCATCCGTAA
TGTATGCGGC
AGCAGAACTT
ATCTTACCGC
GCATCTTTTA
AAAAAGGGAA
TATTGAAGCA
AAAAATAAAC
GGATCGGGAG
TTTTTTTTAA
CCCTATGGTC
TCCCTGCTTG
TGACCACAAc
GGTTCTCCAT
GAGAACTCAA
TAAGACTTAT
GCAGTTCTGT
GGATCATGCA
AACTTCTCCC
ATAAGTTTGA
CCCTCCTAAA
TGTGAAGGAA
AAGCTCTAAG
TGTTTGTGTA
CTTTAATGAG
TGCTGACTC'r
CTTTCCTTCA
TTGCTTTGCT
A.AAATATTCT
TCTTACTCCA
CTTTAGCTTT
TAGAGATCAT
CACACCTCCC
TTGCAGCTTA
TTTTTTCAC1'
GGATCGGCTG
ACTTGTTTAT
ATAAAGCATT
ATCATGTCrG
TTCCTGTGTG
AGTGTAAAGC
TGCCCGCTTT
CGGGGAGAGG
GCTCGGTCGT
CCACAGAATC
CGGAACCGTAA
ATCACAA-kAA
AGGCGTTTCC
GATACCTGTC
GGTATCTCAG
TTCAC-CCCGA
ACGACTTATC
GCGGTGCTAC
TTGGTATCTG
CCGGCAAACA
GCAGAAAAAA
GGAACGAAAA
AGATCCTTTT
GGTC-TGACAG
GTTCATCCAT
CATCTGGCCC
CAGCAATAAA
CCTC-ATCCA
GTTTGCGCAA
TGGCTTCATT
GC.PAAAAGC
TGTTATCACT
GATGCTTTTC
GACCGAGTTG
TAAAAGTGCT
TGTTGAGATC
CTTTCACCAG
TAAGGGCGAC
TTTATCAGGG
AAATAGGGGT
ATCTGCTAGG
TTTTATTTTA
GACTCTCAGT
TGTGTTGGAG
CTCTTCAGTG
TCCTGAGAAG
AGAACCACCA
TGAACAACCG
TTACCAGGAA
GGAATTTGAA
AGAATACCCA
AGTCTACGAG
GCTATGCATT
CCTTACTTCT
GTAAATATAA
TTTTAGATTC
GAAAACCTGT
CAACATTCTA
GAATTGCTAA
ATTTACACCA
GTAACCTTTA
CACAGGCATA
TTAATTTGTA
AATCAGCCAT
CCTGAACCTG
TAATGGTTAC
GCATTCmAGT
GATGATCCTC
TGCAGCTTAT
TTTTTCACTG
TATACCGTCG
AAATTGTTAT
CTGGGGTGCC
CCAGTCGGGA
CGGTTTGCGT
TCGGCTGCGG
AGGGGATAAC
AAAGGCCGCG
TCGACGCTCA
CCCTGGAADGC
CGCCTTTCTC
TTCGGTGTAG
CCGCTGCGCC
GCCACTGGCA
AGAGTTCTTG
CGCTCTGCTG
AACCACCGCT
AGGATCTCkPL
CTCACGTTA
AAATTAAAAA
TTACCAATGC
AGTTGCCTGA
CAGTGCTC-CA
CCAGCCAGCC
GTCTATTAAT
CGTTGTTGCC
CAGCTCCGGT
GGTTAGCTCC
CATGGTTATG
TGTGACTGGT
CTCTTGCCCG
CATCATTGGA
CAGTTCC.ATG
CGTTTCTGGG
ACGGAAATGT
TTATTGTCTC
TCCGCGCACA
TGACCTGAGG
TTTTATTTTT
ACAATCTGCT
GTCGCTGAGT
GAAGGTAAAC
AATCGACCTT
CGAGGAGCTC
GAATTGGCAA
GCCATGAATC
AGTGACACGT
GGCGTCCTCT
AAGAAAGACT
TTTATAAGAC
GTGGTGTGAC
AATTTTTAAG
CAACCTATGG
TTTGCTCAGA
CTCCTCCAAA
GTTTTTTGAG
CAAAGGAAAA
TAAGTAGGCA
GAGTGTCTGC
AAGGGGTTAA
ACCACATTTG
AAACATAAAA
AAATAAAGCA
TGTGGTTTGT
CAGCGCC-GGG
AATGGTTACA
CATTCTAGTT
ACCTCTAGCT
CCGCTCACAAL
TAATGAGTGA
AACCTGTCGT
ATTGGGCGCT
CGAGCGGTAT
GCAGGAAAGA
TTGCTGGCGT
AGTCAGAGGT
TCCCTCGTGC
CCTTCGGGAA
GTCGTTCGCT
TTA-CCGGTA
GCAGCCACTG
AAGTGGTGGC
AAGCCAGTTA.
GGTAGCGGTG
C-AAGATCCTT
GGGATTTGG
TGAAGTTTTA
TTAATCAGTG
CTCCCCGTCG
ATGATACCGC
GGAAGC-GCCG
TGTTGCCGGG
ATTGCTACAG
TCCCAACGAT
TTCGGTCCTC
GCAGCACTGC
GAGTACTCAA
GCGTCAATAC
AAACGTTCTT
TAACCCACTC
TGAGCAAAAA
TGAATACTCA
ATGAGCGGAT
TTTCCCCGAA
CGCGCCGGCT
GAGATGGAGT
CTGATGCCGC
AGTGCGCGAG
3960 4020 4080 4140 4200 4260 4320 4380 4440 4500 4560 4620 4680 4740 4800 4860 4920 4980 5040 5100 5160 5220 5280 5340 5400 5460 5520 5580 5640 5700 5760 5820 5880 5940 6000 6060 6120 618C 6240 6300 6360 6420 6480 6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 S.1.
7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 7800 7860 7920
S*
CAAAA
GGTTAG
ATTGAC
GTTCCG
CCCATT
ACGTC
TATGCC
CCAGTA
TATTAC
ACGGGG
TCAACG
GCGTGT
TTACTG
'TTAA
;GCGT
,TAGT
;CGTT
GACG
LATGG
:AAGT
.CATG
:CATG
;ATTT
;GGAC
ACGG
GCTT
GCTACAACAA
TTTGCGCTGC
TATTAATAGT
ACATAACTTA
TCAATAATGA
GTGGACTATT
ACGCCCCCTA
ACCTTATGGG
GTGATGCGGT
CCAAGTCTCC
TTTCCAAAAT
TGGGAGGTCT
ATCGAAATTA
GGCAAGGCTT
TTCGCGATGT
AATCAATTAC
CGGTAAATGG
CGTATGTTCC
TACGGTAAAC
TTGACGTCAA
ACTTTCCTAC
TTTGGCAGTA
ACCCCATTGA
GTCGTAACAA
ATATAAGCAG
ATACGACTCA
GACCGACAAT
ACGGGCCAGA
GGGGTCATTA
CCCGCCTGGC
CATAGTAACG
TGCCCACTTG
TGACGGTAAA
TTGGCAGTAC
CATCAATGGG
CGTCAATGGG
CTCCGCCCCA
AGCTCTCTGG
CTATAGGGAG
TGCATGAAGA
TATACGCGTT
GTTCATAGCC
TGACCGCCCA
CCAATAGGGA
GCAGTACATC
TGGCCCGCCT
ATCTACGTAT
CGTGGATAGC
AGTTTGTTTT
TTGACGCAAA
CTAACTAGAG
ACCCAAGCTT
ATCTGCTTAG
GACATTGATT
CATATATGGA
ACGACCCCCG
CTTTCCATTG
AAGTGTATCA
GGCATTATGC
TAGTCATCGC
GGTTTGACTC
GGCACCAAA
TGGGCGGTAG
AACCCACTGC
7980 8040 8100 8160 8220 8280 8340 8400 8460 8520 8580 8640 8690 INFORMATION FOR SEQ ID NO: 23: SEQUENCE CHARACTERISTICS: LENGTH: 7874 base pairs TYPE: nucleic acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:23: a a. a.
a a a a a GGTACCAATT TAAATTGATA TTGGAATTCT TGCGGCCGCT TCCTCCAAGA GCACCTCTGG CCCGAACCGG TGACGGTGTC CCGGCTGTCC TACAGTCCTC AGCAGCTTGG GCACCCAGAC GTGGACAAGA AAGTTGGTGA GCTCAC-CGCT CCTGCCTGGA AGGCCCCGTC TGCCTCTTCA GGTCTTCTGG CTTTTTCCCC CCCTGCACAC AAAGGGGCAG CCCTGCC-CCT GACCTAAGCC CCTTCTCTCC TCCCAGATTC TGACAAAACT CACACATGCC CTCAAGGCGG GACAGGTGCC CTGACACGTC CACCTCCATC TCCTCTTCCC CCCAAAACCC GCGTGGTGGT GGACGTGAGC GCGTGGAGGT GCATAATGCC GTGTGGTCAG CGTCCTCACC GCAAGGTCTC CAACAAAGCC GTGGGACCCG TGGGGTGCGA CTGAGAGTGA CCGCTGTACC 50 TACACCCTGC CCCCATCCCG GTCAAAGGCT TCTATCCCAG AACAACTACA AGACCACGCC AAGCTCACCG TGGACAAGAG CATGAGGCTC TGCACAACCA 55 GTGCGACGGC CGGCAAGCCC ACGTACCCCC TGTACATACT CCTGGGCCCC TGCGAGACTG AGTGGCATGA GGGAGGCAGA TGTGCCTGGG CCCCCTAGGG TTGCCAGCGT GGCCCTCCCT GGAGCCCCTG GGGACAGACA GCGCCCCTGT CCTCCCGACC CTATGGCTTC TGAGGCGGAA GTAGCGGCGC ATTAAGCGCG 65 CCAGCGCCCT AGCGCCCGCT GCTTTCCCCG TCAAGCTCTA GGCACCTCGA CCCCAAAAAA
TCTCCTTAGG
TGCTAGCACC
GGGCACAGCG
GTGGAACTCA
AGGACTCTAC
CTACATCTGC
GAGGCCAGCA
CGCATCCCGG
CCCGGAGGCC
AGGCTCTGGG
GTGCTGGGCT
CACCCCAAAG
CAGTAACTCC
CACCGTGCCC
CTAGAGTAGC
TCTTCOTCAG
AAGGACACCC
CACGAAGACC
AAGACAAAGC
GTCCTGCACC
CTCCCAGCCC
GGGCCACATG
AACCTC1'GTC
GGATGAGCTG
CGACATCGCC
TCCCGTGCTG
CAGGTGGCAG
CTACACGCAG
CCGCTCCCCG
TCCCGGGCGC
TGATGGTTCT
GCGGGTCCCA
TGGGGCTCAG
CCAGCAGCAC
CACAGCCCCT
TCCATGCCCA
AGAACCAGCT
GCGGGTGTGG
CCTTTCGCTT
AATCGGGGCA
CTTGATTAGG
TCTCGAGTCT
AAGGGCCCAT
GCCCTGGGCT
GGCGCCCTGA
TCCCTCAGCA
AACGTGAATC
CAGGGAGGGA
CTATGCAGCC
TCTGCCCGCC
CAGGCACAGG
-^'GACCTGCC
GCCAAACTCT
CAATCTTCTC
AGGTAAGCCA
CTGCATCCAG
CACCTGAAC T
TCATGATCTC
crGAGGTCAA
CGCGGGAGGA
AGGACTGGCT
CCATCGAGAA
GACAGAGGCC
CCTACAGGGC
ACCAAGAACC
GTGGAGTGGG
GACTCCGACG
CAGGGGAACG
AAGAGCCTCT
GGCTCTCGCG
CCAGCATGGA
TTCCACGGGT
CTGTCCCCAC
CCAGGGGCTG
CTGCCCTGCGG
GCCTCTGTAG
CTCGGGGGCA
GGGGCTCTAG
TGGTTACGCG
TCTTCCCTTC
TCCCTTTAGG
GTGATGGTTC
CTAGATAACC
CGGTCTTCCC
GCCTGGTCAA
CCAGCGGCGT
GCGTGGTCAC
ACAAGCCCAG
GGGTGTCTGC
CCAGTCCAGG
CCACTCATGC
CTAGGTGCCC
AAGAGCCATA
CCACTCCCTC
TCTGCAGAGC
GCCCAGGCCT
GGACAGGCCC
CCTGGGGGGA
CCGGACCCCT
GTTCAACTGG
GCAGTACAAC
GAATGGCAAG
AACCATCTCC
GGCTCGGCCC
AGCCCCGAGA
AGGTCAGCCT
AGAGCAATGG
GCTCCTTCTT
TCTTCTCATG
CCCTGTCTCC
GTCGCACGAG
AATAAAGCAC
CAGGCCGAGT
ACTGGCCCAG
CCCTCGGCAG
CTGGGCCACG
GAGACTGTCC
TGCTGGGGAT
GGGGTATCCC
CAGCGTGACC
CTTTCTCGCC
GTTCCGATTT
ACGTAGTGGG
GGTCAATCGA
CCTGGCACCC-
GGACTACTTC
GCACACCTTC
CGTGCCC TCC
CAACACCAAG
TGGAAGCCAG
GCAGCAAzGGC
TCAGGGAGAG
CTAACCCAGG
TCCGGGAGGA
AGCTCGGACA
CCAAATCTTG
CC-CCCTCCAG
CAGCCGGGTG
CCGTCAGTCT
GAGGTCACAT
TACGTGGACG
AGCACGTACC
GAGTACAAGT
AAAGCCAA-AG
ACCCTCTGCC
ACCACAGGTG
GACCTGCCTG
GCAGCCGGAG
CCTCTACAGC
CTCCGTGATG
GGGTAAATGA
GATGCTTGGC
CCAGCGCTGC
CTGAGGCCTG
GCTGTGCAGG
GGTGGGGGAT
GGAAGCCCTA
TGTTCTGTGA
GCGGTGGGCT
CACGCGCCCT
GCTACACTTG
ACGTTCGCCG
AGTGCTTTAC
CCATCGCCCT
120 190 240 300 360 420 480 540 600 660 720 780 84U 900 960 102C 1080 1140 1200 1.260 1320 1380 1440 1500 1560 1620 1680 1740 1800 1860 1920 i980 2040 2100 2160 2220 2280 2340 2400 2460
GATAGACGGT
TCCAAACTGG
TGGGGATTTC
AATTCTGTGG
GAAGTATGCA
CCATCCCGCC
TTTTTATTTA
GAGGCTTTTT
CGCGCCAAAC
TCATGGTTCG
ACGGAGACCT
CAACCTCTTC
CCATTCCTGA
TCAAAGAACC
TTATTGAACA
CTGTTTACCA
TGCAGGAATT
TCCCAGAATA
TTGAAGTCTA
TAAAGCTATG
GGAACCTTAC
TAAGGTAAAT
TGTATTTTAG
TGAGGAAAAC
CTCTCAACAT
TTCAGAATTG
TGCTATTTAC
TTCTGTAACC
TCCACACAGG
CTTTTTAATT
TCATAATCAG
TCCCCCTGAA
CTTATAATGG
CACTGCATTC
GCTGGATGAT
TTATTGCAGC
CATTTTTTTC
TCTGTATACC
TGTGAAATTG
APAGCC:TGGG
CTTTCCAGTC
23AGC-CGGTTT TcGTrCGGCT
PATCAGGGGA
45 GTAAAAAGGC
AAAATCGACG
TTCCCCCTGG
TGTCCGCCTT
TCAGTTCGGT
CCGACCGCTG
TATCGCCACT
CTACAGAGTT
TCTGCGCTCT
AACAAACCAC
AAAAAGGATC
AAAACTCACG
TTTTAAATTA
ACAGTTACCA
CCATAGTTGC
60 GCCCCAGTGC
TAAACCAGCC
TCCAGTCTAT
GCAACGTTGT
CATTCAGCTC
AAGCGGTTAG
CACTCATGGT
TTTCTGTGAC
TTTTCGCCCT
AACAACACTC
GGCCTATTGG
AATGTGTGTC
AAGCATGCAT
CCTAACTCCG
TGCAGAGGCC
TGGAGGCCTA
TTGACGGCAA
ACCATTGAAC
ACCCTGGCCT
AGTGGAAGGT
GAAGAATCGA
ACCACGAGGA
ACCGGAATTG
GGAAGCCATG
TGAAAGTGAC
CCCAGGCGTC
CGAGAAGAAA
CATTTTTATA
TTCTGTGGTG
ATAAAATTTT
ATTCCAACCT
CTGTTTTGCT
TCTACTCCTC
CTAAGTTTTT
ACCACAAAGG
TTTATAAGTA
CATAGAGTGT
TGTAAAGGGG
CCATACCACA
CCTGAAACAT
TTACAAATAA
TAG7TTGTGGT
CC'TCCAGCGC
TTATAATGGT
ACTGCATTCT
GTCGACCTCT
TTATCCGCTC
TGCCTAATGA
GGGAAACCTG
GCGTATTGGG
GCGGCGAGCG
TAACGCAGGA
CGCGTTGCTG
CTCAAGTCAG
AAGCTCCCTC
TCTCCCTTCG
GTAGGTCGTT
CGCCTTATCC
GGCAGCAGCC
CTTGAAGTGG
GCTGAAGCCA
CGCTGGTAGC
TCAAGAAGAT
TTAAGGGATT
AAAATGALAGT
ATGCTTAATC
CTGACTCCCC
TGCAATGATA
AGCCGGAAGG
TAATTGTTGC
TGCCATTGCT
CGGTTCCCAA
CTCCTTCGGT
TATGGCAGCA
TGGTGAGTAC
TTGACGTTGG
AACCCTATCT
TTAAAAAATG
AGTTAGGGTG
CTCAATTAGT
CCCAGTTCCG
GAGGCCGCCT
GGCTTTTGCA
TCCTAGCGTG
TGCATCGTCG
CCGCTCAGGA
AAACAGAATC
CCTTTAAAGG
GCTCATTTTC
GCAAGTAAAG
AATCAACCAG
ACGTTTTTCC
CTCTCTGAGG
GACTAACAGG
AGACCATGGG
TGACATAATT
TAAGTGTATA
ATGGAACTGA
CAGA.AGAAAT
CAAAAAAGAA
TGAGTCATGC
AAAAAGCTGC
GGCATAACAG
CTGCTATTAA
TTAATAAGGA
TTTGTAGAGG
AAAATGAATG
AGCAATAGCA
TTGTCCAAAC
GGGGATCTCA
TACAAATA-A-
AGTTGTGGTT
AGCTAGAGCT
ACAATTCCAC
GTGAGCTAAC
TCGTGCCAGC
CGCTCTTCCG
GTATCAC-CTC
AAGAACATGT
GCGTTTTTCC
AGGTGGCGA-A
GTGCGCTCTC
GGAAGCGTGG
CGCTCCAAGC
GGTAACTATC
ACTGGTAACA
TGGCCTAACT
GTTACCTTCG
GGTGGTTTTT
CCTTTGATCT
TTGGTCATGA
TTTAAATCAA
AGTGAGGCAC
GTCGTGTAGA
CCGCGAGACC
GCCGAGCGCA
CGGGAAGCTA
ACAGGCATCG
CGATCAAGGC
CCTCCGATCG
CTGCATAATT
TCAACCAAGT
AGTCCACGTT
CGGTCTATTC
AGCTGATTTA
TGGAAAGTCC
CAGCAACCAT
CCCATTCTCC
CGGCCTCTGA
AAAAGCTTGG
AAGGCTGGTA
CCGTGTCCCA
ACGAGTTCAA
TGGTGATTAT
ACAGAATTAA
TTGCCAAAAG
TAGACATGGT
GCCACCTTAG
CAGAAATTGA
TCCAGGAGGA
AAGATGCTTT
ACTTTTGCTG
GGACAAACTA
ATGTGTTAAA
TGAATGGGAG
GCCATCTAGT
GAGAAAG4GTA
TGTGTTTAGT
ACTGCTATAC
TTATAATCAT
TAACTATGCT
ATATTTGATG
TTTTACTTGC
CAATITGTTGT
TCACAAATTT
TCATCAATGT
TGCTC-GAGTT
GCAATAGCAT
TGTCCAAACT
TGGCGTAATC
ACAACATACG
TCACATTAAT
TGCATTAATG
CTTCCTCGCT
ACTCAJAAGGC
GAGCAAAAGG
ATAGGCTCCG
ACCCGACAGG
CTGTTCCGAC
CGCTTTCTCA
TGGGCTGTGT
GTCTTGAGTC
GGATTAGCAG
ACGGCTACAC
GAAAAAGAGT
TTGTTTGCAA
TTTCTACGGG
GATTATCAAA
TCTAAAGTAT
CTATCTCAGC
TAACTACGAT
CACGCTCACC
GAAGTGGTCC
GAGTAAGTAG
TGGTGTCACG
GAGTTACATG
TTGTCAGAAG
CTCTTACTGT
CATTCTGAGA
CTTTAATAGT
TTTTGATTTA
ACAAAAATTT
CCAGGCTCCC
AGTCCCGCCC
GCCCCATGGC
GCTATTCCAG
ACAGCTCAGG
GGATTTTATC
AAATATGGGG
GTACTTCCAA
GGGTAGGAAA
TATAGTTCTC
TTTGGATGAT
TTGGATAGTC
ACTCTTTGTG
TTTGGGGAAA
AAAAGGCATC
CAAGTTCTCT
GCTTTAGATC
CCTACAGAGA
CTACTGATTC
CAGTGGTGGA
GATGATGAGG
GAAGACCCCA
AATAGAACTC
AAGAAA-ATTA
AACATACTGT
CAAAAATTGT
TATAGTGCCT
TTTAAAJAAAC
TGTTAACTTG
CACAAATAAA
ATCTTATCAT
CTTCGCCCAC
CAPCAAAT TTC
CATCAATGTA
ATC-GTCATAG
AGCCGGAAGC
TGCGTTGCGC
AATCGGCCAA
CACTGACTCG
GGTA-ATACGG
CCAGCAA.kAG
CCCCCCTGAC
ACTATAAAGA
CCTGCCGCTT
ATGCTCACGC
GCACGAACCC
CAACCCGGTA
AGCGAGGTAT
TAGAAGGACA
TGGTAGCTCT
GCAGCAGATT
GTCTGACGCT
AAGGATCTTC
ATATGAGTAA
GATCTGTCTA
ACGGGAGGGC
GGCTCCAGAT
TGCAACTTTA
TTCGCCAGTT
CTCGTCGTTT
ATCCCCCATG
TAAGTTGGCC
CATGCCATCC
ATAGTGTATG
GGACTCTTGT
TA.AGGGATTT
AACGCGAATT
CAGGCAGGCA
CTAACTCCGC
TGACTAATTT
AAGTAGTGAG
GCTGCGATTT
CCCGCTGCCA
ATGGCAAGA
AGAATGACCA
ACCTGGTTCT
AGTAGAGAAC
GCCTTAAGAC
GGAGGCAGTT
ACAAGGATCA
TATAAACTTC
AAGTATAAGr
GCTCCCCTCC
TCTTTGTGAA
TTTAAAGCTC
TAATTGTTTG
ATGCC7LTTAA
CTACTGCTGA
AGGACTTTCC
TTGC1-TTGCTT
TGGAAAAATA
TTTTTCTTAQ,
GTACCTTTAG
TGACTAGAGA
CTCCCACACC
TTTATTGCAG
GCATTTTTTT
GTCTGGATCG
CCCAACTTGT
ACAAATAAAG
TC-lrATCATG
CTGTTTCCTG
ATAG-AGT'A
TCA.CTGCCCG
CGCGCGGGGA
CTGCGCTCGG
TTATCCACAG
GCCAGGAACC
GAGCATCACA
TACCAGGCGT
ACCGGATACC
TGTAGGTATC
CCCGTTCAGC
AGACACGACT
GTAGGCGGTG
GTATTTGGTA
TGATCCGGCA
ACGCGCAGAA
CAGTGGAACG
ACCTAGATCC
ACTTGGTCTG
TTTCGTTCAT
TTACCATCTG
TTATCAGCAA
TCCGCCTCCA
AATAGTTTGC
GGTATGGCTT
TTGTGCAAAA
GCAGTGTTAT
GTAAGATGCT
CGGCGACCGA
2520 2580 2640 2700 2760 2820 2880 2940 3000 3060 3120 3180 3240 3300 3360 3420 3480 3540 3600 3660 3720 3780 3840 3900 3960 4020 4080 4140 4200 4260 4320 4380 4440 4500 4560 4620 4680 0740 4800 4860 4920 4980 5040 52 00 5160 5220 5280 5340 5400 5460 5520 5580 5640 C5700or 5760 5820 5880 5940 6000 6060 6120 6180 6240 6300 6360 6420 6480 see.
0
GTTGCTCTTG
TGCTCATCAT
GATCCAGTTC
CCAGCGTTTC
CGACACGGAA
AGGGTTATTG
GGGTTCCGCG
TAGGTGACCT
TTTATTTTAT
CAGTACAATC
GGAGGTCGCT
CAATTGCATG
CAGATATACG
ATTAGTTCAT
TGGCTGACCG
AACGCCAATA
CTTGGCAGTA
TAAATGGCCC
GTACATCTAC
TGGGCGTGGA
TGGGAGTTTG
CCCATTGACG
CTGGCTAACT
GGAGACCCAA
S
(A)
(B)
(C)
(D)
(xi)
CCCGGCGTCA
TGGAAAACGT
GATGTAACCC
TGGGTGAGCA
ATGTTGAATA
TCTCATGAGC
CACATTTCCC
GAGGCGCGC
TTTTGAGATG
TGCTCTGATG
GAGTAGTGCG
AAGAATCTGC
CGTTGACATT
AGCCCATATA
CCCAACGACC
GGGACTTTCC
CATCAAGTGT
GCCTGGCATT
GTATTAGTCA
TAGCGGTTTG
TTTTGGCACC
CAAATGGGCG
AGAGAACCCA
GCTT
ATACGGGATA
TCTTCGG4GGC
ACTCGTGCAC
AAAACAGGAA
CTCATACTCT
GGATACATAT
CGAAAAGTGC
GGCTTCGAAT
GAGTTTGGCG
CCGCATAGTT
CGAGCAAAAT
TTAGGGTTAG
GATTATTGAC
TGGAGTTCCG
CCCGCCCATT
ATTGACGTCA
ATCATATGCC
ATGCCCAGTA
TCGCTATTAC
ACTCACGGGG
AAAATCAACG
GTAGGCGTGT
CTGCTTACTG
ATACCGCGCC
GAAAACTCTC
CCAACTGATC
GGCAAAATGC
TCCTTTTTCA
TTGAATGTAT
CACCTGACCT
AGCCAGAGTA
CCGATCTCCC
AAGCCAGTAT
TTAAGCTACA
GCGTTTTGCG
TAGTTATTAA
CGTTACATAA
GACGTCAATA
ATGGGTGGAC
AAGTACGCCC
CATGACCTTA
CATGGTGATG
ATTTCCAAGT
GGACTTTCCA
ACGGTGGGAG
GCTTATCGAA
ACATAGCAGA
AAGGATCTTA
TTCAGCATCT
CGCAAAAAAG
ATATTATTGA
TTAGAAAAAT
CGACGGATCG
ACCTTTTTTT
GATCCCCTAT
CTGCTCCCTG
ACAAGGCAAG
CTGCTTCGCG
TAGTAATCAA
CTTACGGTAA
ATGACGTATG
TATTTACGGT
CCTATTGACG
TGGGACTTTC
CGGTTTTGGC
CTCCACCCCA
AAATGTCGTA
GTCTATATAA
ATTAATACGA
ACTTTAAAAG
CCGCTGTTGA
TTTACTTTCA
GGAATAAGGG
AGCATTTATC
AAACAAATAG
GGAGATCTGC
TTAATTTTAT
GGTCGACTCT
CTTGTGTGTT
GCTTGACCGA
ATGTACGGGC
TTACGGGGTC
ATGGCCCGCC
TTCCCATAGT
AAACTGCCCA
TCAATGACGG
CTACTTGGCA
AGTACATCAA
TTGACGTCAA
ACAACTCCGC
GCAGAGCTCT
CTCACTATAG
6540 6600 6660 6720 6780 6840 6900 6960 7020 7080 71.40 7200 7260 7320 7380 7440 7500 7560 7620 7680 7740 7800 7860 7874 INFORMATION FOR SEQ ID NO:24: ;EQUENCE CHARACTERISTICS: LENGTH: 119 amino acids TYPE: amino acid STRA24DEDNESS: single TOPOLOGY: linear SEQUENCE DESCRIPTION: SEQ ID NO:24: Val Gin Leu Val Glu Ser Gly Gly Cys Ala Ala Ser Leu Val GIn Phe Pro Phe Ser Leu Arg Tyr Met Tyr Ser Tyr Ile 50 Lys Gly Arg 65 Leu Gln Met Leu Ser Pro Gly Gly is Ser Asp Tyr Glu Trp Val Val Arg Gin Gly Lys Gly Leu 0O 4@ S 0@*O 0@O*
S
5555 SeeS SS @5 5 S 0 0*O@
S.
5* 0
S
0 Sc..
*OOS@@
S
55505.
0 @5 S S 0 *0 0 Oe Ser Gin Asp Gly 55 Phe Thr Ile Ser 70 Asn Ser Leu Arg ile Thr Arg Asp Asn Asp Glu Asp Asp Tyr Ala Lys 75 Thr Ala Ala Tyr Ala Asp Ser Val Asn Ser Leu Tvr 85 90 Asp Gly Ala Trp Phe Val Tyr Trp Gly 110 Tyr Cys Gin Gly Ala Arg Gly Leu 50 100 Ala Thr Leu Val Thr Val Ser Ser 115 INFORMATION FOR SEQ ID SEQUENCE CHARACTERISTICS: LENGTH: 330 amino acids TYPE: amino acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID Ala Ser Thr Lys Gly Pro Ser Val Phe Pro Leu Ala Pro Ser Ser Lys 15 10 Ser Phe Gly Leu Tyr Lys Pro Lys Val1 145 Tyr Glu His Lys Gin.
225 Leu Pro As n Leu Val 305 Gin Thr Pro ValI Ser Ile ValI Ala Pro 130 ValI Val Gin Gin Ala 2130 Pro Thr Ser Tyr Tyr 290 Phe Lys Gly Pro Thr ValI As n Pro 100 Giu Asp Asp Gly Asn 180 Trp Pro Giu As n Ile 260 Thr L-vs Cys Leu Giy Vali Phe ValI ValI 85 Lys Leu Thr ValI Val1 165 Ser Leu Ala Pro Gin 245 Al a Th r Leu Ser Se r 325 Leu T rp Leu Se r Pro Lys 105 Pro Ser Asp As n ValI 185 Giu Lys Thr Thr Glu 265 Leu Lys Gi y Gly Cy Asn Se Gin Se Ser Se Ser As Thr Hi Ser va Arg Th Pro Gi Ala Ly 170 Val Se Tyr Ly Thr Ii Leu Pr 23 Cys Le 250 Ser As Asp Se Ser Ar Ala Le 31 Lys 330 0O: 26: INFORMATION FOR SEQ ID 50 Ala 1 Ser Phe Gly Leu Tyr Lys SEQUENCE CHARACTERISTICS: LENGTH: 220 amino acids TYPE: amino acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID Ser Thr Lys Gly Pro Ser Val Phe Pro 5 Thr Ser Gly Gly Thr Ala Ala Leu Gly 20 Pro Glu Pro Val Thr Val Ser Trp Asn Val His Thr Phe Pro Ala Val Leu Gin s0 55 Ser Ser Val Val Thr Val Pro Ser Ser 70 Ile Cys Asn Val Asn His Lys Pro Ser 85 Val Giu Pro Lys Ser Cys Asp Lys Thr 100 105 NO: 2 6: Leu Ala Cys Leu Ser Gly Ser Ser Ser Leu Asn Thr His Thr Pro Asp Phe 145 Glu Phe Gly Tyr Giu 1 Ser Tyr Ala Lys Leu Ala Thr Pro 45 Gly 145 As n Gin Se r Ser Th r 225 Tyr Leu Trp Val1 Asp 305 Gly Gin Pro Arg Giu Pro Gin Val Tyr Thr Le 115 120 Glu Leu Thr Lys Asn Gin Val Ser Leu Thr Cy 130 135 14 Tyr Pro Ser Asp Ile Ala Val Giu Trp Glu Se 150 155 Asn Asn Tyr Lys Thr Thr Pro Pro Val Leu As 165 170 Phe Leu Tyr Ser Lys Leu Thr Val Asp Lys Se 180 185 Asn Val Phe Ser Cys Ser Val Met His Glu Al 195 200 Thr Gin Lys Ser Leu Ser Leu Ser Pro Giy Ly 210 215 22 INFORMATION FOR SEQ ID NO:27: Ci) SEQUENCE CHARACTERISTICS: LENGTH: 339 amino acids TYPE: amino acid STRANDEDNESS: single TOPOLOGY: linear (ii) MOLECULE TYPE: protein (xi) SEQUENCE DESCRIPTION: SEQ ID NO:27: Val Asn Leu Giu Ser Giy Gly Cys Val Thr Ser Ara Gin Thr Pro 40 Giy Gly Asp Ile Ile Ser Arg Asp 7 0 Leu Lys Ser Giu Asp Gly Ala Trp 105 Ser Val Ala Ser 120 Ser Lys Ser Thr 135 Asp Tyr Phe Pro 150 Thr Ser Giy Vai Tyr Ser Leu Ser 185 Gin Thr Tyr Ile 200 Asp Lys Lys Val 215 Pro Cys Pro Gly 230 Ser Arg Asp Giu Lys Gly Phe Tyr 265 Gin Pro Giu Asn 280 Gly Ser Phe Phe 295 Gin Gin Gly Asn Gly Giy Glu Thr Asn Asp Phe Thr Ser Glu His 170 Se r Cys Giu Gin Leu 250 Pro Asn Leu Val1 Gin Phe Leu Pro Asn Met T rp Pro 125 Th r Thr Pro Th r As n 205 Se r Giu As n Ile Thr 285 Lys Cys Gly Tyr ValI Val1 Tyr Cys Gly Phe Le u T rp 160 Leu Ser Pro Lys Val1 240 Se r Glu Pro ValI Met 320 His Glu Ala Leu His Asn His Tyr Thr Gin Lys Ser Leu Ser Leu Ser 325 330 335 Pro Gly Lys 69

Claims (51)

1. A method for inhibiting immunoglobulin-induced toxicity resulting from immunoglobulin immunotherapy in a subject comprising administering an immunoglobulin molecule to the subject, the immunoglobulin molecule having a variable region and a constant region, the immunoglobulin molecule being modified prior to administration by structurally altering multiple toxicity-associated domains in the CH2 domain so that immunoglobulin-induced toxicity is inhibited.
2. The method of claim 1 wherein the multiple toxicity associated domains in the constant region are modified so as to render the constant region unable to mediate an ADCC response or activate complement.
3. A method for inhibiting immunoglobulin-induced toxicity resulting from immunotherapy in a subject comprising administering an Ig fusion 20 protein to the subject, the Ig fusion protein having multiple structurally altered toxicity-associated domains in the CH2 domain, and the Ig fusion protein being derived from an IgGI immunoglobulin molecule. 25 4. The method of claim 1 or claim 2 wherein the method prevents immunoglobulin-induced toxicity resulting fiom immunotherapy for a disease, and the immunoglobulin molecule is administered to the subject under conditions such that the structurally altered immunoglobulin recognizes and binds a target, thereby alleviating symptoms associated with the disease. The method of claim 3 'wherein immunoglobulin-induced toxicity resulting from immunotherapy for a disease is prevented, the Ig fusion protein administered is selected to recognize and bind the target, the target being associated with a disease, and the structurally altered Ig fusion protein is administered to the subject under conditions that the structurally altered Ig fusion protein recognizes and binds the target, thereby alleviating symptoms associated with the disease.
6. The method of any one of claims 1, 2 or 4, wherein the immunoglobulin molecule is IgG.
7. The method of any one of claims 1, 2 or 4, wherein the immunoglobulin molecule is IgM.
8. The method of any one of claims 1, 2 or 4, wherein the immunoglublin molecule is IgA.
9. The method of claim 2, wherein the S* immunoglobulin molecule recognizes and binds to the antigen Le y The method of claim 2, wherein the immunoglobulin molecule recognizes and binds to the antigen Le.
11. The method of claim 2 wherein the immunoglobulin molecule administered is an antibody modified from a monoclonal antibody 30 having the amino acid sequence o of the antibody BR96, produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC.
12. The method ofclaim 2, wherein the immunoglobulin molecule administered is an antibody modified from an antibody having the amino acid sequence of chimeric antibody ChiBR96 produced by the hybridoma having the identifying characteristics of HB 10460 as deposited with the ATCC.
13. The method of claim 1 or claim 4, wherein the immunoglobulin recognizes and binds to the antigen Le y
14. The method of claim 1 or claim 4, wherein the immunoglobulin recognizes and binds to the antigen Le".
15. The method of claim 1 or claim 4, wherein the immunoglobulin is an antibody modified from a monoclonal antibody having the amino acid sequence of monoclonal antibody BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC.
16. The method of claim 1 or claim 4, wherein the immunoglobulin is an antibody modified from a chimeric antibody having the amino acid sequence of ChiBR96 produced by the hybridoma having the identifying characteristics of HB10460 as deposited with the ATCC. 25 17. The method of claim 3 or claim 5, wherein the Ig fusion protein recognizes and binds to the antigen Le y
18. The method of claim 3 or claim 5, wherein the Ig fusion protein recognizes and binds to the antigen Lex.
19. The method of claim 3 or claim 5, wherein the Ig fusion protein has an amino acid sequence altered from the amino acid sequence of a monoclonal 72 ooo o antibody BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC by one or more conservative amino acid substitutions, the conservative amino acid substitutions being selected from the group consisting of: any of isoleucine, valine, and leucine for any other of these hydrophobic amino acids; aspartic acid for glutamic acid and vice versa; (3) glutamine for asparagine and vice versa; and serine for threonine and vice versa. The method of claim 3 or claim 5, wherein the Ig fusion protein has an amino acid sequence altered from the amino acid sequence of chimeric antibody ChiBR96 produced by the hybridoma having the identifying characteristics of HB 10460 as deposited with the ATCC by one or more conservative amino acid substitutions, the conservative amino acid substitutions being selected from the group consisting of: any of isoleucine, valine, and leucine for any other of these hydrophobic amino acids; aspartic acid for glutamic acid and vice versa; (3) glutamine for asparagine and vice versa; and serine for threonine and vice versa.
21. A pharmaceutical composition comprising a pharmaceutically effective amount of a structurally altered immunoglobulin and an acceptable carrier, wherein the structurally altered immunoglobulin: recognizes and binds a target associated with cancer and has a CH2 domain altered to inhibit immunoglobulin- induced toxicity resulting from administration of the immunoglobulin in the pharmaceutical composition.
22. A pharmaceutical composition comprising a pharmaceutically effective amount of a structurally altered Ig fusion protein and an acceptable carrier, wherein the structurally altered Ig fusion protein: recognizes and binds a target associated with cancer and has a CH 2 domain altered to inhibit immunoglobulin- induced toxicity resulting from administration of the structurally altered fusion protein. *73 *oooo
23. A method of blocking or inhibiting the growth of carcinomas in vivo comprising .administering to a subject a pharmaceutically effective amount of the composition of claim 21 or claim 22.
24. The composition of claim 21, wherein the immunoglobulin in the composition is labeled so as to directly or indirectly produce a detectable signal with a compound selected from the group consisting of a radiolabel, an enzyme, a chromophore, a chemiluminescer, and a fluorescer.
25. The composition of claim 22, wherein the Ig fusion protein in the composition is labeled so as to directly or indirectly produce a detectable signal with a compound selected from the group consisting of a radiolabel, an enzyme, a chromophore, a chemiluminescer, and a fluorescer.
26. The method of any one of claims 2, 4 or 6 to 16, wherein the immunoglobulin molecule is conjugated to a cytotoxic agent.
27. The method of claim 1, wherein the immunoglobulin is conjugated to a cytotoxic agent.
28. The method of any one of claims 3, 5 or 17 to 22, wherein the IG fusion protein is conjugated to a cytotoxic agent.
29. The method of any one of claims 26 to 28, wherein 25 the cytotoxic agent is selected from the group consisting of alkylating agents, anthracyclines, antibiotics, and anti-mitotic agents. A method for killing cancer cells, the cancer cells being characterized as a group of cells having a tumor associated antigen on their cell 30 surface, which method comprises of administering to a subject harboring the cancer an amount of the composition of claim 21 or claim 22 joined to a cytotoxic agent in an amount sufficient to kill cancer cells under conditions that permit the molecule so joined to bind the tumour associated antigen on the cell surface in order to kill the cells.
31. A pharmaceutical composition comprising a pharmaceutically effective amount of an antibody having an amino acid sequence structurally altered from an antibody designated BR96 antibody produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC, the structurally altered antibody having a CH2 domain altered to inhibit immunoglobulin-induced toxicity, and an acceptable carrier.
32. A method for killing cells associated with a proliferative type disease, the disease being characterized by cells having an antigen capable of being specifically bound by monoclonal antibody BR96 produced by the 'ybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC on the cell surface, which comprises administering to a subject harboring such cells an effective amount of a composition of claim 31 joined to doxorubicin such that the composition of claim 31 'joined to doxorubicin binds the antigen on the cell surface and kills the cells.
33. A method of inhibiting toxicity induced by a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC resulting from 1: immunoglobulin immunotherapy in a subject comprising administering a modified BR96 molecule to the subject, the modification comprising the deletion or 25 substitution of at least one amino acid residue in the toxicity associated domain localized to amino acids 310-331 and the deletion or substitution of at least one •amino acid residue in the toxicity associated domain localized to amino acids 231- 238 so that complement and Fc receptor mediated toxicity is inhibited. Si' 30 34. A method for preventing toxicity induced by a monoclonal antibody designated BR96 as produced by the hybridoma having the identifying O*O O characteristics of HB10036 as deposited with the ATCC resulting from immunotherapy for cancer in a subject comprising: mutating the BR96 polypeptide by the deletion or substitution of at least one amino acid residue in the toxicity associated domain localized to amino acids 310-331 and the deletion or substitution of at least one amino acid residue in the toxicity associated domain localized to amino acids 231-238 so the complement and Fc receptor mediated immunoglobulin-induced toxicity is inhibited in the mutated BR96 polypeptide; and administering the mutated BR96 polypeptide of step to the subject under conditions that the peptide recognized the binds cancer associated Le y antigens, thereby alleviating symptoms associated with the cancer, the mutation of the toxicity associated domains thereby preventing BR96 toxicity in the subject. A chimeric antibody whose amino acid sequence is modified from the amino acid sequence of the chimeric antibody ChiBR96 produced by the hybridoma having identifying characteristics of HB10460 as deposited with the ATCC, the modified chimeric antibody having the CH1 and CH 3 domains but not the CH 2 domain, the antibody being designated CbR96-A.
36. The chimeric antibody of claim 35 which is expressed by the plasmid having the sequence shown in SEQ ID
37. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of the monoclonal antibody designated BR96 and produced by the hybridoma having the identifying characteristics of HB10036 as deposited with the ATCC, wherein the constant region has been structurally altered so that Cu 1 and the CH 3 domains are present but the CH 2 domain is not, the anti body designated hBR96- S**2A.
38. The monoclonal antibody of claim 37 which is expressed by the plasmid having the sequence shown in SEQ ID NO:12.
39. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC, the antibody having a structurally altered constant region wherein leucine at amino acid position 235 is mutated to alanine and glycine in amino acid position 237 is mutated to alanine, the antibody designated hBR96-2B. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC, the antibody having a structurally altered constant region wherein glutamic acid at amino acid position 318 is mutated to serine; lysine at amino acid position 320 is mutated to serine; and lysine at amino acid position 322 is mutated to serine, the antibody designated hBR96-2C.
41. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of the monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC, the antibody having a structurally altered constant region wherein proline at amino acid position 331 is mutated to alanine, the antibody designated hBR96-2D.
42. A monoclonal antibody whose amino acid sequence is S: modified from the amino acid sequence of the monoclonal antibody designated 25 BR96 produced by the hybridoma having the identifying characteristics of HB10036 i as deposited with the ATCC, the antibody having a structurally altered constant region wherein leucine at amino acid position 235 is mutated to alanine; glycine at amino acid position 237 is mutated to alanine; glutamic acid at amino acid position 318 is mutated to serine, lysine at amino acid position 320 is mutated to serine, and lysine at amino acid position 322 is mutated to serine, the antibody being designated hBR96-2E. 77 II 4J. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of the monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of IHB 10036 as deposited with the ATCC, the antibody having a structurally altered constant region wherein leucine at amino acid position 235 is mutated to alanine; glycine at amino acid position 237 is mutated to alanine; and proline at amino acid position 331 is mutated to alanine, the antibody being designated hBR96-2F.
44. A monoclonal antibody whose amino acid sequence is modified from the amino acid sequence of a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC having a structurally altered constant region wherein glutamic acid at amino acid position 318 is mutated to serine; lysine at amino acid position 320 is mutated to serine; lysine at amino acid position 322 is mutated to serine; and proline at amino acid position 331 is mutated to alanine, the antibody designated hBR96-2G. A monoclonal antibody whose amino acid sequence is modified from a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC, having a structurally altered constant region wherein leucine at amino acid position 235 is mutated to alanine; glycine at amino acid position 237 is mutated to alanine; o ~glutamic acid at amino acid position 318 is mutated to serine; lysine at amino acid S: position 320 is mutated to serine; lysine at amino acid position 322 is mutated to 25 serine; and proline at amino acid position 331 is mutated to alanine, the antibody being designated hBR§6-2H.
46. A nucleic acid molecule encoding the antibody of claim claim 37, or any of claims 39 to
47. The nucleic acid molecule of claim 46 wherein the nucleic S acid molecule is a cDNA. 78
48. A plasmid which comprises a nucleic acid molecule of claims 46 or 47.
49. A host sector system comprising the plasmid of claim 48 in a suitable host cell. A method for producing a protein comprising allowing the host cell of the host vector system of claim 49 to replicate under conditions that the protein encoded by the plasmid of claim 48 is expressed so as to produce the protein in the host and then recovering the protein so produced.
51. Use of an immunoglobulin molecule as defined in any one of claims 1, 2, 4, 8 to 16, 26 or 27 in the manufacture of a pharmaceutical composition for inhibiting immunoglobulin-induced toxicity resulting from immunoglobulin immunotherapy.
52. Use of an Ig fusion protein as defined in any one of claims 3, 5, 7 to 20 or 28 in the manufacture of a pharmaceutical 20 composition for inhibiting immunoglobulin-induced toxicity resulting from immunotherapy.
53. Use of a structurally altered immunoglobulin as defined in claim 21 in the manufacture of a pharmaceutical composition for blocking or inhibiting the growth of carcinomas in vivo.
54. Use of a structurally altered Ig fusion protein as defined in claim 22 in the manufacture of a pharmaceutical composition for blocking or inhibiting the growth of carcinomas in vivo.
55. Use of a structurally altered immunoglobulin or a structurally altered Ig fusion protein as defined in claims 21 or 22 respectively in the manufacture of a pharmaceutical composition for killing cancer cells having a tumor associated antigen on their cell surface, Y:\Vilet-Grac o DeeteN57417.doc the pharmaceutical composition being joined to a cytotoxic agent in an amount sufficient to kill cancer cells under conditions that permit the molecule so joined to bind the tumor associated antigen on the cell surface in order to kill the cells.
56. Use of an antibody as defined in claim 31 in the manufacture of a pharmaceutical composition for killing cells associated with a proliferative type disease characterised by cells having an antigen capable of being specifically bound by monoclonal antibody BR96 produced by the hybridoma having the identifying characteristics of HB10036 as deposited with the ATCC on the cell surface, the pharmaceutical composition being joined to doxorubicin such that the composition binds the antigen on the cell surface and kills the cells.
57. Use of a modified BR96 molecule as defined in claim 33 in the manufacture of a pharmaceutical composition for inhibiting toxicity induced by a monoclonal antibody designated BR96 produced by the hybridoma having the identifying characteristics of HB 10036 as de posited with the ATCC resulting from immunoglobulin immunotherapy.
58. Use of a mutated B96 polypeptide resulting from step of claim 34 in the manufacture of a pharmaceutical composition for preventing toxicity induced by a monoclonal antibody designated BR96 as produced by the hybridoma having the identifying characteristics of HB 10036 as deposited with the ATCC resulting from immunotherapy for cancer. o
59. An immunoglobulin molecule substantially as °hereinbefore described with reference to the examples. ce De*et 577 Y:\Violt-GracaNo Delete657417.doc A plasmid substantially as hereinbefore described as illustrated in the figures.
61. A method according to claim 1 or claim 3 substantially as hereinbefore described.
62. A pharmaceutical composition according to any one of claims 21, 22 or 32 substantially as hereinbefore described.
63. A method for inhibiting toxicity according to claim 33 or claim 34 substantially as hereinbefore described.
64. A chimeric antibody according to claim substantially as hereinbefore described. A monoclonal antibody according to any one of claims 37 to 45 substantially as hereinbefore described. DATED: 17 March, 2004 PHILLIPS ORMONDE FITZPATRICK Attorneys for: Bristol-Myers Squibb Company and Mae Joanne Rosok oo* *oooo* YWVolet-GraceWo Delete657417.oc
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Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
CANCER RESEARCH (1992), 52, 3262-3266 *
HUM. ANTIBOD. HYBRIDOMAS (1990),1, 47-54 *

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