AU601257B2 - 5'-protected nucleoside phosphonites and process for their preparation - Google Patents
5'-protected nucleoside phosphonites and process for their preparation Download PDFInfo
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- AU601257B2 AU601257B2 AU11384/88A AU1138488A AU601257B2 AU 601257 B2 AU601257 B2 AU 601257B2 AU 11384/88 A AU11384/88 A AU 11384/88A AU 1138488 A AU1138488 A AU 1138488A AU 601257 B2 AU601257 B2 AU 601257B2
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- 239000002777 nucleoside Substances 0.000 title claims abstract description 17
- 238000000034 method Methods 0.000 title claims abstract description 14
- 238000002360 preparation method Methods 0.000 title claims abstract description 8
- 230000008569 process Effects 0.000 title claims abstract description 6
- -1 nucleoside phosphonites Chemical class 0.000 title description 20
- 150000001875 compounds Chemical class 0.000 claims abstract description 32
- 125000000217 alkyl group Chemical group 0.000 claims abstract description 12
- 150000003833 nucleoside derivatives Chemical class 0.000 claims abstract description 12
- 239000000460 chlorine Chemical group 0.000 claims abstract description 10
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims abstract description 8
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical group [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 claims abstract description 8
- ABLZXFCXXLZCGV-UHFFFAOYSA-N Phosphorous acid Chemical class OP(O)=O ABLZXFCXXLZCGV-UHFFFAOYSA-N 0.000 claims abstract description 8
- 125000004432 carbon atom Chemical group C* 0.000 claims abstract description 8
- 229910052801 chlorine Inorganic materials 0.000 claims abstract description 8
- 125000006239 protecting group Chemical group 0.000 claims abstract description 8
- 239000003153 chemical reaction reagent Substances 0.000 claims abstract description 7
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims abstract description 7
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims abstract description 5
- 229910052757 nitrogen Inorganic materials 0.000 claims abstract description 5
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims abstract description 5
- 229920006395 saturated elastomer Polymers 0.000 claims abstract description 5
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical group [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 claims abstract description 4
- 125000003545 alkoxy group Chemical group 0.000 claims abstract description 4
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Chemical group BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 claims abstract description 4
- 229910052794 bromium Inorganic materials 0.000 claims abstract description 4
- 239000011737 fluorine Substances 0.000 claims abstract description 4
- 229910052731 fluorine Inorganic materials 0.000 claims abstract description 4
- 125000001153 fluoro group Chemical group F* 0.000 claims abstract description 4
- 125000005842 heteroatom Chemical group 0.000 claims abstract description 4
- 125000000623 heterocyclic group Chemical group 0.000 claims abstract description 4
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 claims abstract 3
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 claims abstract 3
- XRBCRPZXSCBRTK-UHFFFAOYSA-N phosphonous acid Chemical class OPO XRBCRPZXSCBRTK-UHFFFAOYSA-N 0.000 claims description 4
- 239000003643 water by type Substances 0.000 claims description 2
- 239000011669 selenium Substances 0.000 abstract description 9
- BUGBHKTXTAQXES-UHFFFAOYSA-N Selenium Chemical compound [Se] BUGBHKTXTAQXES-UHFFFAOYSA-N 0.000 abstract description 7
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical compound [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 abstract description 7
- 229910052711 selenium Inorganic materials 0.000 abstract description 7
- 229910052717 sulfur Inorganic materials 0.000 abstract description 6
- 239000011593 sulfur Substances 0.000 abstract description 6
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 abstract description 3
- 239000005549 deoxyribonucleoside Substances 0.000 abstract description 3
- 229910052760 oxygen Inorganic materials 0.000 abstract description 3
- 239000001301 oxygen Substances 0.000 abstract description 3
- 238000006243 chemical reaction Methods 0.000 description 14
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 11
- 238000005481 NMR spectroscopy Methods 0.000 description 10
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 10
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 9
- 238000005160 1H NMR spectroscopy Methods 0.000 description 8
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 6
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 6
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 6
- OFBQJSOFQDEBGM-UHFFFAOYSA-N Pentane Chemical compound CCCCC OFBQJSOFQDEBGM-UHFFFAOYSA-N 0.000 description 6
- 239000000047 product Substances 0.000 description 6
- 101100170604 Mus musculus Dmap1 gene Proteins 0.000 description 4
- 239000002253 acid Substances 0.000 description 4
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 4
- 239000002798 polar solvent Substances 0.000 description 4
- 238000003756 stirring Methods 0.000 description 4
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 3
- 125000002103 4,4'-dimethoxytriphenylmethyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)(C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H])C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H] 0.000 description 3
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 3
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 3
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 3
- 238000004458 analytical method Methods 0.000 description 3
- 230000015572 biosynthetic process Effects 0.000 description 3
- 229910052739 hydrogen Inorganic materials 0.000 description 3
- 239000000543 intermediate Substances 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 125000003835 nucleoside group Chemical group 0.000 description 3
- 239000012074 organic phase Substances 0.000 description 3
- 230000003647 oxidation Effects 0.000 description 3
- 238000007254 oxidation reaction Methods 0.000 description 3
- 239000000843 powder Substances 0.000 description 3
- 239000002244 precipitate Substances 0.000 description 3
- 150000003254 radicals Chemical class 0.000 description 3
- 239000002904 solvent Substances 0.000 description 3
- 239000007858 starting material Substances 0.000 description 3
- 238000003786 synthesis reaction Methods 0.000 description 3
- CIHOLLKRGTVIJN-UHFFFAOYSA-N tert‐butyl hydroperoxide Chemical compound CC(C)(C)OO CIHOLLKRGTVIJN-UHFFFAOYSA-N 0.000 description 3
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 3
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 description 2
- 108020004414 DNA Proteins 0.000 description 2
- 102000053602 DNA Human genes 0.000 description 2
- ROSDSFDQCJNGOL-UHFFFAOYSA-N Dimethylamine Chemical compound CNC ROSDSFDQCJNGOL-UHFFFAOYSA-N 0.000 description 2
- KAESVJOAVNADME-UHFFFAOYSA-N Pyrrole Chemical compound C=1C=CNC=1 KAESVJOAVNADME-UHFFFAOYSA-N 0.000 description 2
- 125000003118 aryl group Chemical group 0.000 description 2
- 239000012964 benzotriazole Substances 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 239000003795 chemical substances by application Substances 0.000 description 2
- 239000012043 crude product Substances 0.000 description 2
- CDPKWOKGVUHZFR-UHFFFAOYSA-N dichloro(methyl)phosphane Chemical compound CP(Cl)Cl CDPKWOKGVUHZFR-UHFFFAOYSA-N 0.000 description 2
- WFPZPJSADLPSON-UHFFFAOYSA-N dinitrogen tetraoxide Chemical compound [O-][N+](=O)[N+]([O-])=O WFPZPJSADLPSON-UHFFFAOYSA-N 0.000 description 2
- 238000000605 extraction Methods 0.000 description 2
- 238000004128 high performance liquid chromatography Methods 0.000 description 2
- YACKEPLHDIMKIO-UHFFFAOYSA-N methylphosphonic acid Chemical class CP(O)(O)=O YACKEPLHDIMKIO-UHFFFAOYSA-N 0.000 description 2
- SCLFRABIDYGTAZ-UHFFFAOYSA-N methylphosphonic acid dichloride Chemical compound CP(Cl)(Cl)=O SCLFRABIDYGTAZ-UHFFFAOYSA-N 0.000 description 2
- 239000002773 nucleotide Substances 0.000 description 2
- UEZVMMHDMIWARA-UHFFFAOYSA-M phosphonate Chemical compound [O-]P(=O)=O UEZVMMHDMIWARA-UHFFFAOYSA-M 0.000 description 2
- 238000001556 precipitation Methods 0.000 description 2
- 230000009257 reactivity Effects 0.000 description 2
- 150000003335 secondary amines Chemical class 0.000 description 2
- 229910052938 sodium sulfate Inorganic materials 0.000 description 2
- 235000011152 sodium sulphate Nutrition 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 1
- YQTCQNIPQMJNTI-UHFFFAOYSA-N 2,2-dimethylpropan-1-one Chemical group CC(C)(C)[C]=O YQTCQNIPQMJNTI-UHFFFAOYSA-N 0.000 description 1
- LKPFWCPZERQLFI-UHFFFAOYSA-N 2,4,6-trimethylpyridine;hydrochloride Chemical compound Cl.CC1=CC(C)=NC(C)=C1 LKPFWCPZERQLFI-UHFFFAOYSA-N 0.000 description 1
- SLRMQYXOBQWXCR-UHFFFAOYSA-N 2154-56-5 Chemical compound [CH2]C1=CC=CC=C1 SLRMQYXOBQWXCR-UHFFFAOYSA-N 0.000 description 1
- 238000004679 31P NMR spectroscopy Methods 0.000 description 1
- QTBSBXVTEAMEQO-UHFFFAOYSA-M Acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 description 1
- OMPJBNCRMGITSC-UHFFFAOYSA-N Benzoylperoxide Chemical group C=1C=CC=CC=1C(=O)OOC(=O)C1=CC=CC=C1 OMPJBNCRMGITSC-UHFFFAOYSA-N 0.000 description 1
- VEXZGXHMUGYJMC-UHFFFAOYSA-M Chloride anion Chemical compound [Cl-] VEXZGXHMUGYJMC-UHFFFAOYSA-M 0.000 description 1
- 101100289061 Drosophila melanogaster lili gene Proteins 0.000 description 1
- WZKSXHQDXQKIQJ-UHFFFAOYSA-N F[C](F)F Chemical class F[C](F)F WZKSXHQDXQKIQJ-UHFFFAOYSA-N 0.000 description 1
- 238000005654 Michaelis-Arbuzov synthesis reaction Methods 0.000 description 1
- 101100396982 Mus musculus Inmt gene Proteins 0.000 description 1
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 1
- 101710163270 Nuclease Proteins 0.000 description 1
- 229910019142 PO4 Inorganic materials 0.000 description 1
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical compound [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 1
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical group O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 1
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical class [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 1
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 1
- 230000004913 activation Effects 0.000 description 1
- 125000002252 acyl group Chemical group 0.000 description 1
- 150000001412 amines Chemical class 0.000 description 1
- QRUDEWIWKLJBPS-UHFFFAOYSA-N benzotriazole Chemical compound C1=CC=C2N[N][N]C2=C1 QRUDEWIWKLJBPS-UHFFFAOYSA-N 0.000 description 1
- 230000003197 catalytic effect Effects 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- 238000004587 chromatography analysis Methods 0.000 description 1
- 238000001816 cooling Methods 0.000 description 1
- 238000000354 decomposition reaction Methods 0.000 description 1
- 239000005547 deoxyribonucleotide Substances 0.000 description 1
- 125000002637 deoxyribonucleotide group Chemical group 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 150000005690 diesters Chemical class 0.000 description 1
- 238000004821 distillation Methods 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 230000000694 effects Effects 0.000 description 1
- 150000002148 esters Chemical class 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- 230000007717 exclusion Effects 0.000 description 1
- 239000000706 filtrate Substances 0.000 description 1
- 239000006260 foam Substances 0.000 description 1
- 239000007789 gas Substances 0.000 description 1
- 229910052736 halogen Inorganic materials 0.000 description 1
- 150000002367 halogens Chemical class 0.000 description 1
- 230000003993 interaction Effects 0.000 description 1
- 238000011835 investigation Methods 0.000 description 1
- INQOMBQAUSQDDS-UHFFFAOYSA-N iodomethane Chemical compound IC INQOMBQAUSQDDS-UHFFFAOYSA-N 0.000 description 1
- 239000007788 liquid Substances 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 230000011987 methylation Effects 0.000 description 1
- 238000007069 methylation reaction Methods 0.000 description 1
- 239000012299 nitrogen atmosphere Substances 0.000 description 1
- 239000012454 non-polar solvent Substances 0.000 description 1
- 231100000065 noncytotoxic Toxicity 0.000 description 1
- 230000002020 noncytotoxic effect Effects 0.000 description 1
- 125000003729 nucleotide group Chemical group 0.000 description 1
- 238000002515 oligonucleotide synthesis Methods 0.000 description 1
- 239000007800 oxidant agent Substances 0.000 description 1
- 239000003208 petroleum Substances 0.000 description 1
- 235000021317 phosphate Nutrition 0.000 description 1
- ACVYVLVWPXVTIT-UHFFFAOYSA-N phosphinic acid Chemical compound O[PH2]=O ACVYVLVWPXVTIT-UHFFFAOYSA-N 0.000 description 1
- 150000003008 phosphonic acid esters Chemical class 0.000 description 1
- 150000003013 phosphoric acid derivatives Chemical class 0.000 description 1
- 229910052698 phosphorus Inorganic materials 0.000 description 1
- 239000011574 phosphorus Substances 0.000 description 1
- 238000001394 phosphorus-31 nuclear magnetic resonance spectrum Methods 0.000 description 1
- 230000001681 protective effect Effects 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 230000008707 rearrangement Effects 0.000 description 1
- 238000010898 silica gel chromatography Methods 0.000 description 1
- 125000003808 silyl group Chemical group [H][Si]([H])([H])[*] 0.000 description 1
- 238000004611 spectroscopical analysis Methods 0.000 description 1
- 150000003512 tertiary amines Chemical class 0.000 description 1
- 150000003536 tetrazoles Chemical class 0.000 description 1
- 238000005809 transesterification reaction Methods 0.000 description 1
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 229940045145 uridine Drugs 0.000 description 1
- 238000005292 vacuum distillation Methods 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/28—Phosphorus compounds with one or more P—C bonds
- C07F9/48—Phosphonous acids [RP(OH)2] including [RHP(=O)(OH)]; Thiophosphonous acids including [RP(SH)2], [RHP(=S)(SH)]; Derivatives thereof
- C07F9/4883—Amides or esteramides thereof, e.g. RP(NR'2)2 or RP(XR')(NR''2) (X = O, S)
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02P—CLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
- Y02P20/00—Technologies relating to chemical industry
- Y02P20/50—Improvements relating to the production of bulk chemicals
- Y02P20/55—Design of synthesis routes, e.g. reducing the use of auxiliary or protecting groups
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Biotechnology (AREA)
- Engineering & Computer Science (AREA)
- Saccharide Compounds (AREA)
- Solid-Sorbent Or Filter-Aiding Compositions (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Silicon Polymers (AREA)
- Treatment Of Liquids With Adsorbents In General (AREA)
Abstract
1. Claims for the contracting states : BE, CH, LI, DE, FR, GB, IT, LU, NL, SE A process for the preparation of deoxyribonucleoside phosphonates of the general formula I see diagramm : EP0136543,P14,F1 in which T denotes a protecting group for a primary hydroxyl group, B denotes a nucleoside base radical in which any exoamino group present is protected, G denotes a protecting group for a secondary hydroxyl group, Z denotes oxygen, sulfur or selenium and R denotes alkyl having up to 8 C atoms, cyclohexyl, benzyl, or phenyl which is optionally substituted by fluorine, chlorine, bromine, lower alkyl, lower alkoxy or trifluoromethyl, characterized in that a difunctional phosphonylating reagent of the general formula II see diagramm : EP0136543,P14,F2 in which X denotes chlorine or Y and Y denotes a group of the formula see diagramm : EP0136543,P14,F3 R**1 and R**2 representing identical or different alkyl or cycloalkyl radicals having up to 8 C atoms, or phenyl radicals, or R**1 and R**2 , together with the nitrogen, representing a saturated or unsaturated heterocyclic ring which can contain further hetero atoms, being reacted with a nucleoside of the general formula III see diagramm : EP0136543,P14,F4 in which T and B have the meanings given above, the resulting compound of the general formula IV see diagramm : EP0136543,P14,F5 being reacted with a compound of the general formula V see diagramm : EP0136543,P15,F1 in which B and G have the meanings given above, and the resulting compounds of the general formula VI see diagramm : EP0136543,P15,F2 in which T, R, B and G have the meanings given above, being oxidatively converted to compound of the general formula I. 1. Claims for the contracting state AT A process for the preparation of deoxyribonucleoside phosphonates of the general formula I see diagramm : EP0136543,P15,F3 in which T denotes a protecting group for a primary hydroxyl group, B denotes a nucleoside base radical in which any exoamino group present is protected, G denotes a protecting group for a secondary hydroxyl group, Z denotes oxygen, sulfur or selenium and R denotes alkyl having up to 8 C atoms, cyclohexyl, benzyl, or phenyl which is optionally substituted by fluorine, chlorine, bromine, lower alkyl, lower alkoxy or trifluoromethyl, characterized in that a difunctional phosphonylating reagent of the general formula II see diagramm : EP0136543,P16,F1 in which X denotes chlorine or Y and Y denotes a group of the formula see diagramm : EP0136543,P16,F2 R**1 and R**2 representing identical or different alkyl or cycloalkyl radicals having up to 8 C atoms, or phenyl radicals, or R**1 and R**2 , together with the nitrogen, representing a saturated or unsaturated heterocyclic ring which can contain further hetero atoms, being reacted with a nucleoside of the general formula III see diagramm : EP0136543,P16,F3 in which T and B have the meanings given above, the resulting compound of the general formula IV see diagramm : EP0136543,P16,F4 being reacted with a compound of the general formula V see diagramm : EP0136543,P16,F5 in which B and G have the meanings given above, and the resulting compounds of the general formula VI see diagramm : EP0136543,P17,F1 in which T, R, B and G have the meanings given above, being oxidatively converted to compound of the general formula I.
Description
S~zns- ture of App~icant LOD..ED AT SU"''C or See) of cmayand signature 8f FEB 1988 preseribed by M its Articles of Association. Meb u n
BY
(James Mrray COMMONWEALTH OF AUSTRA 6 y 0 5 '7rmi PATENTS ACT 1952.69 COMPLEETE
SPECIFICATION
(ORIGINAL)
Class Int. Class Application Number: Lodged: Complete Specification Lodged: Accepted; *Priority: Re lated Art: Published: 1.~ amC2-~ Name of Applicant: Address of Applicant Actual Inventor: Addre.ss for Service: HOECHST AKTrIENGESELLSCHAFT 45 Bruningstrasse, D-6230 Frankfurt/Main 80, Federal Republic of Germny JOACHIM ENGELS and ALFRED JAGER EDWD. WATERS SONS, 50 QUEEN STREET, MELBOURNE, AUSTRALIA, 3000.
Complete Specification for the invention entitled: NUCLEOSIDE PHOSPHONITES AND PROCESS FOR THEIR PREPARATION The following statoment is a full description of this invention, including the best method of performing it known to US Signature. To: THE COMMISSIONER OF PATENTS.
HOECHST AKTIENGESELLSC AFT WATERMARK PATENT TRADEMARK ATTORNEYS -2- HOE 83/F 178 Non-ionic analogs of deoxyribonucleic acids (DNA) are important for the investigation of DNA-DNA and DNAprotein interactions. Of particular interest are phosphonic acid esters of deoxyribonucleotides as a result of 5 their chemical stability and on the basis of their capability to enter into cells and their high resistance to cell S C nucleases. Hitherto, four different strategies have been S described for the synthesis of methylphosphonate analogs of nucteotides: 10 1. Ogilvie et al. Nemer and K.K. Ogilvie, Tetraf c' hedron Lett. 21, Page 4149 (1980)) prepared a completely protected uridyt-3',5'-uridine methylphosphonate by Michaelis-Arbuzov rearrangement of the corresponding phosphite intermediates. This reaction (methyl iodide, 20 hours at 50 0 C) might not be generally applicable as a result of its drastic conditions, because, for example, methylation of the purine bases is to be expected.
2. Ts'o et at. Miller, J. Yano, E. Yano, C. Caroll, K. Jayaraman and P.O.P. Ts'o, Biochemistry 18, 5134 (1979); Proc. Natl. Acad. Sci. USA 78, 1537 (1981); P.S. Miller, N. Drean, S.M. Pulford and K.B. McParland, J. Biol. Chem. 225, 9659 (1980)) developed a synthesis strategy which is analogous to the phosphotriester method in oligonucleotide synthesis. Here, a protected nucleotide 3-0-ethylphphosphonic acid -cyanoethy ester is used as the most important intermediate. This method has the Y- i L.i-Y- ~~~IXIIWI*CI~~
I
3 known advantages and disadvantages of the phosphotriester method, the low reactivity of the phosphorus(V) compound being mentioned in particular as a disadvantage.
3. Agarwal et at. Agarwal and F. Riftina, Nuct.
Acid Res. 6, 3009 (1979)) used methylphosphonic acid dichloride as a difunctional phosphonylating agent. In the second step, the chloride has to be activated by means of tetrazole, The crude product obtained can only be a* purified by efficient chromatography.
10 4. J. Engels and A. Jager, Angew. Chem. Suppl. 1982. 2010, and N.D. Sinha, V. Grossbruchhaus and H. Koster, Tetrahedron Lett. 24, 887 (1983) used methyldichlorophosphane as the starting material. The Latter authors synthesized 0 the nucleotide methylphosphonates on a polymeric support.
0 15 The products obtained are yet to be characterized.
Whereas the reactivity of the second halogen of methylphosphonic acid dichloride is generally too Low and additional activation is necessary, the activity in the case of phosphinic acid dichlorides is if anything too high. Thus, handling difficulties arise (extremely anhydrous medium) and, in addition, the symmetrical phosphonous acid ester is unavoidably formed.
By contrast, the present invention relates to a process for the preparation of deoxyribonucleoside phosphonates of the general formula I i- n~ i- "1 -4-
B
T-O
V
Z=P R 0 IB oo
G-O
in which d T denotes a protecting group for a primary hydroxyl as S group, preferably triphenylmethyl Tr), p-anisoyldiphenyLmethyL or di(p-anisoyL)phenylmethyL, B denotes a nucleoside base radical in which any exoamino group present is protected, preferably 1thyminyl, 1-(N-4-benzoycytosinyL), 9-(N-6-benzoyladeninyl) or 9-(N-2-isobutyroylguaninyl), G denotes a protecting group for a secondary hydroxyl group, Z denotes oxygen, sulfur or selenium and R denotes alkyl having up to 8 C atoms, cycLohexyl, benzyl,or phenyl optionally substituted by fluorine, chLorine, bromine, Lower alkyl, lower alkoxy or trifluoromethyL, and preferably denotes methyl, ethyl, phenyl or benzyl, especially methyl, wherein a difunctional phosphonylating reagent of the general formula II
X
Y
(II)
wherein X denotes chlorine or Y and Y denotes a group of the formula
R
1
-N
SR
2
R
1 and R 2 representing identical or different alkyl or cycloalkyl radicals having up to 8 C atoms, or phenyl radicals, or R1 and R2, together with the nitrogen, representing a saturated or unsaturated heterocyclic ring which can contain further heteroatoms, is reacted with a o o nucleoside of the general formula III 0 6 ta ta T-o- O\ (III) AH II-O wherein T and B have the meanings given above, preferably
B
0 0 R -P y is reacted with a compound of the general formuLa V G-0 wherein B and G have the meanings given above, preferabLy at -20 to +100°C, in particular at room temperature, and the resulting compound of the general formmua VI the resulting compound of the general formiula VI 6
B
TO
0 I
I
R-P B
(VI)
i G-O 4 4 *9le# wherein T, R, B and G have the meanings given above, is oxidatively "onverted to compounds of the general formula 1, preferably at -80 to +100C, in particular at -20 0 C to room ,5 temperature.
Sand form the subject of the present invention, as does the 4 method for their preparation.
In principle, the radical R in the difunctional phosphonylating reagent of the general formula II can be any non-cytotoxic organic radical which is inert towards the compounds of the general formulae II to VI and which does not hinder the reactions.
Examples of possible groups of the general formula
-NR
1
R
2 are: dimethylamino, diethylamino, diisopropylamino, methylethylamino, methylpropylamino, methylhexylamino, methylcyclohexylamino, methylbenzylamino, morpholino, pyrrolidino, piperidino, methylanilino, diphenylamino, imidazoli, triazolo, benzotriazolo and tetrazolo.
The starting materials of the general formula II S :E B(12.43)
T*.
4r '14 7
H-NR
1
R
2
(VII)
in which R and R 2 have the meanings given above.
Correspondingly, compounds of the general formula II in which X denotes a group of the formula Y are accessible by further reaction with the same secondary amine or a different secondary amine of the general formula VII. The compounds of the formula II can be purified by vacuum distillation.
The reaction of the phosphonylating reagent of the general formula II with a suitably protected nucleoside of the general formula III is carried out in a moderately polar solvent, preferably chloroform, with the exclusion of moisture. Tertiary amines, preferably ethyldiisopropyli, amine (lunig's base), can be used as auxiliary bases for this reaction. Working-up is carried out by aqueous extraction and precipitation of the products of the general formula IV with a non-polar solvent such as petroleum ether or pentane. The phosphonous acid ester-amides of the general formula IV obtained in this way precipitate as colorless powders and can be characterized by spectroscopic data such as 1H-NMR, 3 1 P-NMR or UV and elementary analysis. Furthermore, they can also be converted, by direct oxidation, to the phosphonic acid ester-amides of the general formula VIII T O 6 Z P -R
I
(VIII)
ii t 8 T, B, Z, R and Y having the meanings given above, which can then be isolated and characterized.
Remarkably, no symmetrical dinucleoside 3',3phosphonite is formed within the limit of detection.
As shown by 3 1 P-NMR, the compounds of the general formula IV are stable for at Least 1 month in powder form, when stored dry and at a maximum of -20 0 C. This great stability of the phosphonous acid ester-amides is astonishing and emphasizes the value of this method. Its universal applicability in the synthesis of phosphonic e .acid diesters of nucleosides is shown by the reaction with 9, suitably 3'-protected nucleosides: ,t In this reaction, the 5'-protected nucleoside phosphonites of the generaL formula IV are dissolved in a moderately polar solvent, preferably acetonitrile, chLoroa 4I t form or tetrahydrofuran, and mixed with the nucleoside of 0 the general formula V (protected in the 3'-position).
Suitable protecting groups G in the compounds of the general formula V are acyl groups such as benzoyL, acetyl, S 20 pivaloyl or levulonyl, or silyl groups such as t-butyl- 4 dimethylsilyl. The reaction is catalyzed by an acid, preferably an azole or amine hydrochloride. Benzotriazole is particularly suitable. It is remarkable that HPLC analysis of the product shows no symmetrical and only traces of the 3',3'-isomeric phosphonate.
The labile intermediate, namely the phosphonous acid triester of the general formula VI, is oxidized directly to the phosphonate of the general formula I. In addition to the oxidizing agents usually employed for this 1 *1 s :lili
'I
4II 444( 9 purpose, such as dinitrogen tetroxide or iodine, peroxides, in particular anhydrous t-butyl hydroperoxide, have proved valuable. The reaction is preferably carried out in a moderately polar solvent, particular preference being afforded to acetonitrile or chloroform. Particular consideration should be given to the known acid-catalyzed transesterification of the diacylalkylphosphonites (F.W.
Hoffmann, R.G. Roth and T.C. Simmons, J. Amer. Chem. Soc.
5937 40 (1958)).
The compounds (some of which are already known) are characterized by means of 31P-NMR and 1 H-NMR and also chromatographic comparisons with authentic material.
The compounds of the general formula I in which Z denotes sulfur or selenium are prepared by direct reaction of the compounds of the general formula VI with elemental sulfur or selenium. Stirring with the stoichiometric quantity of sulfur or selenium, in a polar solvent such as tetrahydrofuran, leads to good yields of the corresponding thiophosphonates or selenophosphonates of the general 20 formula I. Characterization is carried out by means of 3 1 P-NMR and 1H-NMR as well as elementary analysis.
Because of the presence of a center of asymmetry in the nucleoside moiety and the production of another on the phosphorus, the phosphates of the general formula I exist as mixtures of diastereomers (see Table 6, isomers 1 and 2).
The isomer ratio, which is close to the statistical ratio of 1:1, is only very slightly influenced by a variation in the parameters such as the solvent, the temt t ti 4 *1
__I
perature and the sequence of addition.
Preparation of a compound of general formula IV is described in Examples 1 and 2. Properties of various examples of compound of general formula IV are given in Table 2. The other examples and tables are included for reference to the parent invention.
4 t 4. rz Example 1: Starting material 11 3 C-P[N(CI 3 2 2 In a 1000 ml three-necked flask fitted with a dropping funnel and a mechanical stirrer, 125 ml (1.9 mol) of dimethylamine are introduced into 400 ml of anhydrous diethyl ether and reacted, over a period of 60 minutes, with a solution of 60 ml (0.40 mol) of methyldichlorophosphane in 200 ml of anhydrous ether, Suwhile cooling with ice. After stirring for 2 hours at Sroom temperature and for 1 hour at 50 0 C, the precipitate S ,is filtered off under a protective gas and rinsed twice w th 100 ml of ether and the filtrate is concentrated at about 0.1 bar. The remaining residue is rapidly distilled over at 0.5 bar/124 0 C. Precision distillation with a Vigreux column (50 cm) at 64-65 0 C/65 mbar gives 36.6 g (66% of theory) of a colorless liquid.
Analysis: C 0.2% 3 1 P-NMR (TIF) =87 ppm 1 1-NMR (CDC 3 S 1.23 ppm 711z, P-CII 3 2.66 ppm 711z, N(Ct 3 2 E" Example 2: The 5'-tritylnucleosides III (1 mmol) are dissolved in 6 ml of anhydrous chloroform under an inert nitrogen atmosphere and I 3
CPEN(CH
3 2 2 (2 mmol) is added. The reaction is complete after 12 hours at room temperature (stirring) or after only 2 hours if catalytic quantities (0.1 mmot) of collidine hydrochloride are added.
11 The solution is then transferred with 100 ml of methylene chloride to a 250 ml separating funnel and extracted twice by shaking with 50 ml of saturated sodium chloride solution (containing 0.1 ml of triethylamine).
The organic phase is dried over anhydrous sodium sulfate and concentrated to a foam. This is stirred for 2 hours with 50 ml of pentane. The residue is filtered off and dissolved in 2 ml of diethyl ether and the solution is slowly added dropwise to 50 ml of thoroughly stirred pentane. The fine precipitate is filtered off and dried to give an 85-95% yield of the compound of the general formula IV (Tables 2 and 3).
a The compounds can be identified directly by c31P nuclear magnetic resonance spectroscopy or, after oxidation with t-butyl hydroperoxide, as phosphonic acid ester-amides of the general formula VIII (Tables 4 and t In the 31P-NMR spectrum, these substances show up to 3% of hydrolyzed product (nucleoside methylphosphinate), but no detectable quantity of symmetrical dinucleoside 3',3'-phosphonited This demonstrates the superiority of the method compared with former methods, which always yielded about 5-10% of these products. When stored as dry powders at -20 0 C, no decomposition can be observed within a month.
The following reagents were also employed analogously: N (C 2
H
5 2 1 3 C 1 12- S N LC i (C 2-72
H
3 C 2 \Cl C H 'Cl C Example 3: The 5'-tritylnucleoside III (1.00 mmol) and 1.71 ml (10 mmol) of N,N,N-ethyldiisopropylamine are introduced into 6 ml of THF, and 2.00 mmol of phosphonyla- Sting agent II are then slowly added dropwise. After stirring at room temperature overnight, the reaction solution is added dropwise to ice-cold water (50 ml, saturated with NaCI). After extraction with twice 20 ml I 10 of methylene chloride, the organic phase is dried with sodium sulfate and the solvent is removed in vacuo.
Further purification is carried out by precipitation as above (Tables 2 and 3).
Example 4: h The product of Example 3, 3'-0-Benzoylthymidine (0.20 mmol) and l-H-benzo-triazole (0.80 mmol) are dried in a round-bottomed flask and then dissolved in 1.0 ml of dry acetronitrile. The reaction is complete within one minute, a very air-labile and acid-labile phosphonite VI being formed; this is converted directly to the phosphonates I, with 80-90% yield, by oxidation with anhydrous t-butyl hydroperoxide (0.25 mol) (according to H. Langhals, E. Fritz and J. Mergelsberg, Chem. Ber. 113, 3662 (1980) dissolved in 13 acetonitrile or tetrahydrofuran.
Alternatively, 30 mg (0.95 mmol) of sulfur are added to 0.7 mmol of VI at -20 0 C and the mixture is stirred overnight at room temperature. The reaction is generally already complete after a few hours. 20 ml of Ichloroform are then added and the organic phase is extrac- Sted three times by shaking with water. After drying over sodium sulfate and removal of the solvent, a crude product Sis obtained which is purified by silica gel chromatography to give the compound I in 80-90% yield (Table 6).
Alternatively, 118 mg (1.5 mmol) of black selenium I are added to 0.7 mmol of VI and the mixture is stirred overnight. After working-up (as above), the compound I is obtained in 60% yield (Table 6).
HPLC analysis of the reaction mixture (in the case where Z 0 by comparison with the authentic reference, P.O.P. T'so et al., Biochemistry 18, 5134 (1979)) showed about 1% of the 3',3'-ospsphonates and no TABLE 1: Compounds CII) H 3
C-PXY
1 H-NMR (CDC[ cfCppm) 31
P-NMR
g(ppm)a) B.p.
0 C/bar
P-CH
3 Other protons CL CH 141.2 44-47/10 1.61 7.41-7.18 3. -Nz 7 Id J13.1 Hz) Cm, 5H, aromatic H,d J=8.3 Hz)) CL -NC 6
H
5 2 132 2 b) 92-44/10-8 1.53 7.5-6.9 d J=14 Hz) 10 H, aromatic H) -N
\N
N
Nttw CNy1O 2
NPJ-NL
62 c) 72 c) 91 c) 81 d) 92/10-5 CM.p.: 60 0
C)
110 0
C)
2.20 d(J=10 Hz) 2.32 d(J=9 Hz) 2.49 d(J=9 Hz) 2.60 d(J=9 Hz) 7.45 Cs, 2H) 6.95 Cs, 4H) 8.51 Cs, 2H) 8.07 Cs, 2H) 8.89 Cs, 2H) 8.88 Cs, 2H) a) reLative to 85% H 3
PO
b) 1,2-dichoroethane c) THF d) dioxane .i I -ew TABLE 2: Compounds (IV)Th TrO -Q 0 1I 1 2
H
3 C- -NR R 1 H-NMR CCDCL 3 Ifppm) b) P-C
H
3 R R 2 31 P-NM~R, s(ppm)a) C1 2- d ich Lo r oet h an e CH 3 N R 1R2 C H 3 C H 3 139.61-140.7 7.60/7.57 1.44/1.43 1.16/1.14 2.76/2.47 CS) d(J=1.2 Hz) dCJ=7.3/7.0 Hz) dCJ=8.9 Hz), N(CH3) 2 C 2 H 5 C 2 H 5 137.3 7.59/7.57 1.41/1.40 1.18/1.16 1.04/0.91 (dCJ=7.0 Hz), dCJ=1.2 Hz) d(J=1.2/.0.Hz) dCJ=7.6 Hz) NC2 H 5 2.76-3.09 Cm, seL., compLex) -NCCH 2 CH 3 2 CHC(CH 3 2 CHC(CH 3 2 -120.4 dCJ=1.2 Hz) 1.37/1.36 dCJO0.9 Hz) 1.18/1.13 dCJ=8.5/7.9 1.13/1.07/1 .04/0.98 Hz) d(J= 6.7 Hz), NECHCCH 3) 2] CH 3 C6 H 5- 134.7/- 136.2 7.51/7.50 1.40/1.38 1.33-1.31 3.02/2.86 3 6 dCJ1.2 Hz) dCJ1.3/0.9 Hz) dCJ8.8 Hz) dCJ3.4 Hz), N-CH 3 C 6H 5 C6 H 5- 130.3/128.6 7. 39/7. 47 dCJ=1.2 Hz) 1.40/1.36 1.15/1.10 dCJ=1.2/0.9 Hz) dCJ=9.8 Hz) a) relative to 85% H 3 PO 4 b) relative to TMS TABLE 3: Compounds (IV) T-ol C' 0
H
3 C- P-N (CH 3 )1 H-NMR (CDCL 3 cf~ppm) d) Ta) Bb) 31 P-NMR, cf(Ppm) c) H-8 H-2 OCH 3 P- H3 2 P-H3 1,2-di chLor-oethane MMTr Ad Bz -145.3 8.73/8.72 8.19/8.16 3.76/3.75 2.67/2.25 1.20/1.19 d 0=8.8 Hz) d C0=7.3 Hz) DMTr raz -146.2/145.8 0 DMTr G1B -144.8 a) MMTr =monomet.hoxytr-iphenyLmethyL~p-,anisoyLdiphenyLnethyL) DMTr dimethoxytriphenyLmethyL~di(p-anisoyL)phenyLmethyL) b) Ad Bz 9-(N-6-benzoytadeiinyL) C Bz= 1-CN-4-benzoyLcytosinyL) G i 9-CN-2-iSobutyroyLguaninyL) 0) reLative to 85% H 3 PO 4 d) reLative to TMS TABLE 4: Compounds MVIDI o 4*t 4 0 4 4 6 5 6 4 4 0 644 0Th 1 H-NMR(CDCL X(- 11 R R (1,2-dichloroethane) A~max (Log E) H 6 P HR 1 3 C:MR NRpmf RV(HO)1 CH 3 40 263 nm 7.60/7.50 1.38/1.40 1.41/1.38 2.65/2.49 N(CH 3 2 d~jzl6.2 Hz) (d,J=9.5 Hz)
C
2
H
5 -39.
5 c) 264. nm (4.00) 7.52 1.42 1. 3f. 0.94 (t,Jx7.1 HN) d~l.2 Hz) d1j=16.5 Hz) d[J=0.9 Hz) -N(CH 2 CH 3 2 2.8-3.1 m, N(C 2H 5)2 C 2 H 5 39 5 d) 264 nm (3.98) 7.59 1.38 1.36 1.07 (t,J=7.0 Hz) d(J=1 .2 HzO d[J=76.5 Hz) HC 2
H
5 2 3.05 (dq, J=10.7 Hz) JCH 2CH 3=7.0 Hz
NCC
2 H 5 2 CH(CH 3) -38 264 nm (3.97) 7.53/7.57 1.36 1.31 1.19/1.17/1.04 32d(J=16.2 Hz) (d,J=4.0/6.7/6.7Hz) NECH(CH 3 2 1 C H 33 5 c) 260. nm (4.09) 7.51 1.68 1.23 165 uppo~* e) (d,J=1.2 Hz) d[J-16.8 Hz) (S)
CH
5 -30.4c) 260 nm (4.08) 7.48 1.59 1.34.
Lower a) relative to 85Z H 3 PO 4 b) reLative to TMS c) .1/2 H 2 0 ()dlJ-17.7 Hzl (S) d) anhydrous e) isomers separated, relative mobiLtty.in TLC (e:hiyL acetate/methanol 100:4) L 5: Co po nd 4 CH
B
31 r. C)0=P- (H-NR(CC)(Pm b) 3 P-NMR, Jkppm) cCDC 3 B B 2 dichLoroehane UV (CH OH) H -8 H 2 0 -CH 3 P-NCCH 3) P-CH3 MMTr. AdB -41 278 nm (4.39) 8.73/8.68 8.17/8.11 3.7613.75 2.66/2.64 1.23/1.20 230 nm (4.52) CS) Cs) CS) dJ8.9 Hz') dCJ=7.4 Hlz) MMTr Cz -41.1 O7 DMTr GB -41.4 as for Table 3 TABLE 6: Compounds (I) 0 Tay Thy 31 P-NMR, A'(ppm)a) X 1,2-dich~oroethane UV(CH 3 OH) Nmax (Log E) Zone b) 1
H-NMR,
-CH 3 CDCL 3 r -CH 3 J(ppm) C) p-CH.3 S -99/97.5 2I65 nm (4.25) upper 1.89 CTp) 1.43 (pT) 1.87 d(J=15.2 Hz) Lower 1.89 (Tp) 1.46 (pT) 1.80 CS) Cs) d(J=15.3 Hz) Se -107.5/ -105.5 1 37=860.Hz p=Se 264 n~m (4.26) upper Lower 1 .90 (Tp) d(J=1.2 Hz) 1 .98 CTp)
(S)
1 .42 (pT) d(j=l.1 Hz) 1 .46 CpT) (s) 2.04 d(J=14.2 Hz) 1.90 d(J=14.6 Hz) a) relative to 85%. H 3 PO 4 b) reLative mobility in TLC (ethyl acetate/methanol 100:4) c) re~Lative to TMS
Claims (2)
1. 5'-protected nucl.eoside phosphonites of general formula T <0 T 0 I V o 0 R-P Y in which .o T denotes a protecting group for a prinary hydroxyl group, o B denotes a nucleoside base radical in which any exo-amino group present is protected, 4 t S.R denotes alkyl having up to 8 C atoms, cyclohexyl, benzyl or phenyl optionally substituted by fluorine, chlorine, bromine, lower alkyl, lower alkoxy or trifluoromethyl, Y denotes a group of the formula 0 R'1 -N 2 R R and R representing identical or different alkyl or cycloalkyl radicals having up to 8 C atoms, or phenyl radicals, or R 1 and R, together with the nitrogen, representing a saturated or unsaturated heterocyclic ring which can contain further heteroatoms. r -21-
2. A process for the preparation of 5'-protected nucleoside of phosphonates of the general formula IV as claimed in claim 1, wherein a diffunctional phosphonylating reagent of the general formula II 1Y X wherein X denotes chlorine or Y and Y is as defined in claim 1 is reacted with a nucleoside of the general formula III i (III) H-0 to obtain the resulting compound of the general formula IV B ST-.O R -P Y T. B, R and Y being as defined in claim 1. 1 DATED this 5th day of February 1988. t} HOECHST AKTIENGESELLSCHAFT EDWD. WATERS SONS SPATENT ATTORNEYS QUEEN STREET MELBOURNE. VIC. 3000.
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|---|---|---|---|
| DE19833332068 DE3332068A1 (en) | 1983-09-06 | 1983-09-06 | METHOD FOR PRODUCING NUCLEOSIDALKYL, ARALKYL AND ARYLPHOSPHONITES AND PHOSPHONATES |
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| DE3916871A1 (en) * | 1989-05-24 | 1990-11-29 | Boehringer Mannheim Gmbh | MODIFIED PHOSPHORAMIDITE PROCESS FOR THE PREPARATION OF MODIFIED NUCLEIC ACIDS |
| DK0464638T3 (en) * | 1990-07-02 | 1997-10-13 | Hoechst Ag | Oligonucleotide analogs with terminal 3-3 or 5-5 internucleotide bonds. |
| US5512668A (en) * | 1991-03-06 | 1996-04-30 | Polish Academy Of Sciences | Solid phase oligonucleotide synthesis using phospholane intermediates |
| WO1994002499A1 (en) * | 1992-07-27 | 1994-02-03 | Hybridon, Inc. | Oligonucleotide alkylphosphonothioates |
| NZ261480A (en) * | 1993-01-08 | 1997-05-26 | Hybridon Inc | Preparation of dimeric nucleotide derivatives containing phosphonothionate internucleotide linkages |
| US6087491A (en) | 1993-01-08 | 2000-07-11 | Hybridon, Inc. | Extremely high purity oligonucleotides and methods of synthesizing them using dimer blocks |
| ATE138384T1 (en) * | 1993-01-25 | 1996-06-15 | Hybridon Inc | OLIONUCLEOTIDE ALKYLPHOSPHONATE AND PHOSPHONOTHIOATE |
| EP0721848B1 (en) * | 1994-07-26 | 2002-07-03 | Sony Corporation | Image transfer method |
| EP0828749B1 (en) * | 1995-05-26 | 2003-07-16 | Genta Incorporated | Methods for the synthesis of organophosphorus derivatives |
| DE69726276T2 (en) * | 1996-05-03 | 2004-11-18 | Avecia Biotechnology, Inc., Milford | IN SITU PRODUCTION OF NUCLEOSIDE PHOSPHORAMIDITES AND THEIR USE IN OLIGONUCLEOTID SYNTHESIS |
| DE102004049339A1 (en) | 2004-10-08 | 2006-04-13 | Basf Ag | Process for the purification of phosphorus-containing chelate ligands |
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| EP0090789A1 (en) * | 1982-03-26 | 1983-10-05 | Monsanto Company | Chemical DNA synthesis |
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| AU1138488A (en) | 1988-07-14 |
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| ES8505384A1 (en) | 1985-05-16 |
| CA1235079A (en) | 1988-04-12 |
| JPS6072899A (en) | 1985-04-24 |
| JPH0662662B2 (en) | 1994-08-17 |
| DK131691D0 (en) | 1991-07-05 |
| DK166585C (en) | 1993-10-25 |
| EP0136543A2 (en) | 1985-04-10 |
| PT79172A (en) | 1984-10-01 |
| DK131691A (en) | 1991-07-05 |
| DK162895B (en) | 1991-12-23 |
| DK424784A (en) | 1985-03-07 |
| DK131591D0 (en) | 1991-07-05 |
| DE3475307D1 (en) | 1988-12-29 |
| DE3332068A1 (en) | 1985-03-21 |
| EP0136543B1 (en) | 1988-11-23 |
| GR80287B (en) | 1985-01-07 |
| ES535627A0 (en) | 1985-05-16 |
| DK424784D0 (en) | 1984-09-05 |
| JPH0531560B2 (en) | 1993-05-12 |
| PT79172B (en) | 1986-09-10 |
| DK166585B (en) | 1993-06-14 |
| EP0136543A3 (en) | 1986-07-16 |
| AU570266B2 (en) | 1988-03-10 |
| JPH05262787A (en) | 1993-10-12 |
| IE842268L (en) | 1985-03-06 |
| AU3275684A (en) | 1985-03-14 |
| IE57904B1 (en) | 1993-05-05 |
| DK162895C (en) | 1992-05-11 |
| DK167359B1 (en) | 1993-10-18 |
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