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AU2002233540A1 - Allele-specific primer extension assay - Google Patents

Allele-specific primer extension assay

Info

Publication number
AU2002233540A1
AU2002233540A1 AU2002233540A AU2002233540A AU2002233540A1 AU 2002233540 A1 AU2002233540 A1 AU 2002233540A1 AU 2002233540 A AU2002233540 A AU 2002233540A AU 2002233540 A AU2002233540 A AU 2002233540A AU 2002233540 A1 AU2002233540 A1 AU 2002233540A1
Authority
AU
Australia
Prior art keywords
allele
primer extension
specific primer
extension assay
assay
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002233540A
Other versions
AU2002233540A8 (en
Inventor
Afshin Ahmadian
Joakim Lundeberg
Pal Nyren
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Biotage AB
Original Assignee
Pyrosequencing AB
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from GB0104560A external-priority patent/GB0104560D0/en
Priority claimed from US09/791,190 external-priority patent/US20030104372A1/en
Application filed by Pyrosequencing AB filed Critical Pyrosequencing AB
Publication of AU2002233540A1 publication Critical patent/AU2002233540A1/en
Publication of AU2002233540A8 publication Critical patent/AU2002233540A8/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6858—Allele-specific amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2002233540A 2001-02-23 2002-02-22 Allele-specific primer extension assay Abandoned AU2002233540A1 (en)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
GB0104560.8 2001-02-23
GB0104560A GB0104560D0 (en) 2001-02-23 2001-02-23 Method
US09/791,190 2001-02-23
US09/791,190 US20030104372A1 (en) 1996-12-23 2001-02-23 Allele specific primer extension
US7192602A 2002-02-07 2002-02-07
US10/071,926 2002-02-07
PCT/GB2002/000794 WO2002068684A2 (en) 2001-02-23 2002-02-22 Allele-specific primer extension assay

Publications (2)

Publication Number Publication Date
AU2002233540A1 true AU2002233540A1 (en) 2002-09-12
AU2002233540A8 AU2002233540A8 (en) 2008-02-14

Family

ID=27256081

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002233540A Abandoned AU2002233540A1 (en) 2001-02-23 2002-02-22 Allele-specific primer extension assay

Country Status (2)

Country Link
AU (1) AU2002233540A1 (en)
WO (1) WO2002068684A2 (en)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ATE418621T1 (en) 2003-04-24 2009-01-15 Afshin Ahmadian METHOD FOR DETECTING ALLEL-SPECIFIC MUTATIONS
EP1718661B1 (en) * 2004-02-06 2011-09-14 Canadian Blood Services A method for the simultaneous determination of blood group and platelet antigen genotypes
GB0600116D0 (en) * 2006-01-05 2006-02-15 Univ Cardiff Allele-specific sequencing
ES2542426T3 (en) * 2009-11-16 2015-08-05 Genomictree, Inc. Genotyping method
US9803236B2 (en) 2010-08-06 2017-10-31 Tsinghua University Microarray-based assay integrated with particles for analyzing molecular interactions
JP5872569B2 (en) * 2010-10-27 2016-03-01 キャピタルバイオ コーポレーションＣａｐｉｔａｌＢｉｏ Ｃｏｒｐｏｒａｔｉｏｎ Molecules labeled with luminophores coupled to particles for microarray-based assays
US20160130641A1 (en) * 2012-02-15 2016-05-12 Janssen Diagnostics, Llc Highly sensitive method for detecting low frequency mutations
CN103760355B (en) 2013-12-05 2015-09-16 博奥生物集团有限公司 Micro-array chip detects the particle marker method of nucleotide sequence
WO2018152162A1 (en) * 2017-02-15 2018-08-23 Omniome, Inc. Distinguishing sequences by detecting polymerase dissociation
US11634774B2 (en) * 2017-05-18 2023-04-25 Pharmacogenetics Limited Genome-wide capture of inter-transposable element segments for genomic sequence analysis of human DNA samples with microbial contamination
CN109371115A (en) * 2018-08-24 2019-02-22 山东德诺生物科技有限公司 For detecting the primed probe group and its application of rs5918
EP3856931B1 (en) * 2018-09-25 2023-10-11 Co-Diagnostics, Inc. Allele-specific design of cooperative primers for improved nucleic acid variant genotyping
WO2024259297A2 (en) * 2023-06-15 2024-12-19 Caris Science, Inc. Compositions and methods for targeting extracellular dna

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE4129653A1 (en) * 1991-09-06 1993-03-11 Boehringer Mannheim Gmbh PROCESS FOR DETECTION OF SIMILAR NUCLEIC ACIDS
JPH05308999A (en) * 1992-05-08 1993-11-22 Sumitomo Metal Ind Ltd Method for determining hepatitis B virus pre-C mutation
GB9626815D0 (en) * 1996-12-23 1997-02-12 Cemu Bioteknik Ab Method of sequencing DNA
US6485944B1 (en) * 1997-10-10 2002-11-26 President And Fellows Of Harvard College Replica amplification of nucleic acid arrays
US20020025519A1 (en) * 1999-06-17 2002-02-28 David J. Wright Methods and oligonucleotides for detecting nucleic acid sequence variations

Also Published As

Publication number Publication date
WO2002068684A8 (en) 2003-12-04
AU2002233540A8 (en) 2008-02-14
WO2002068684A3 (en) 2007-12-27
WO2002068684A2 (en) 2002-09-06

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase