MX2011009550A - Transgenic plants with altered redox mechanisms and increased yield. - Google Patents
Transgenic plants with altered redox mechanisms and increased yield.Info
- Publication number
- MX2011009550A MX2011009550A MX2011009550A MX2011009550A MX2011009550A MX 2011009550 A MX2011009550 A MX 2011009550A MX 2011009550 A MX2011009550 A MX 2011009550A MX 2011009550 A MX2011009550 A MX 2011009550A MX 2011009550 A MX2011009550 A MX 2011009550A
- Authority
- MX
- Mexico
- Prior art keywords
- seq
- plant
- plants
- polynucleotide encoding
- transgenic
- Prior art date
Links
- 230000009261 transgenic effect Effects 0.000 title claims abstract description 148
- 230000001965 increasing effect Effects 0.000 title claims description 12
- 230000007246 mechanism Effects 0.000 title 1
- 108091033319 polynucleotide Proteins 0.000 claims abstract description 136
- 102000040430 polynucleotide Human genes 0.000 claims abstract description 136
- 239000002157 polynucleotide Substances 0.000 claims abstract description 136
- 238000000034 method Methods 0.000 claims abstract description 22
- 108700019146 Transgenes Proteins 0.000 claims abstract description 10
- 230000002708 enhancing effect Effects 0.000 claims abstract description 7
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 91
- 230000014509 gene expression Effects 0.000 claims description 84
- 150000001413 amino acids Chemical class 0.000 claims description 77
- 102000004196 processed proteins & peptides Human genes 0.000 claims description 75
- 229920001184 polypeptide Polymers 0.000 claims description 74
- 210000004027 cell Anatomy 0.000 claims description 37
- 210000003470 mitochondria Anatomy 0.000 claims description 22
- 108020003285 Isocitrate lyase Proteins 0.000 claims description 9
- ODBLHEXUDAPZAU-UHFFFAOYSA-N isocitric acid Chemical compound OC(=O)C(O)C(C(O)=O)CC(O)=O ODBLHEXUDAPZAU-UHFFFAOYSA-N 0.000 claims description 5
- 230000001172 regenerating effect Effects 0.000 claims description 2
- 241000196324 Embryophyta Species 0.000 description 314
- 235000001014 amino acid Nutrition 0.000 description 75
- 229910001868 water Inorganic materials 0.000 description 70
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 68
- 108090000623 proteins and genes Proteins 0.000 description 52
- 241000219194 Arabidopsis Species 0.000 description 46
- 239000002028 Biomass Substances 0.000 description 36
- 235000018102 proteins Nutrition 0.000 description 26
- 102000004169 proteins and genes Human genes 0.000 description 26
- 230000036541 health Effects 0.000 description 23
- 150000007523 nucleic acids Chemical class 0.000 description 23
- 102000039446 nucleic acids Human genes 0.000 description 21
- 108020004707 nucleic acids Proteins 0.000 description 21
- 210000003763 chloroplast Anatomy 0.000 description 20
- RWSXRVCMGQZWBV-WDSKDSINSA-N glutathione Chemical compound OC(=O)[C@@H](N)CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O RWSXRVCMGQZWBV-WDSKDSINSA-N 0.000 description 20
- 230000012010 growth Effects 0.000 description 17
- 239000003642 reactive oxygen metabolite Substances 0.000 description 17
- 101100015712 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) HYR1 gene Proteins 0.000 description 16
- ATNHDLDRLWWWCB-AENOIHSZSA-M chlorophyll a Chemical compound C1([C@@H](C(=O)OC)C(=O)C2=C3C)=C2N2C3=CC(C(CC)=C3C)=[N+]4C3=CC3=C(C=C)C(C)=C5N3[Mg-2]42[N+]2=C1[C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@H](C)C2=C5 ATNHDLDRLWWWCB-AENOIHSZSA-M 0.000 description 16
- 108010033024 Phospholipid Hydroperoxide Glutathione Peroxidase Proteins 0.000 description 15
- 102100023410 Phospholipid hydroperoxide glutathione peroxidase Human genes 0.000 description 15
- 125000003275 alpha amino acid group Chemical group 0.000 description 15
- 230000000694 effects Effects 0.000 description 15
- 108020004414 DNA Proteins 0.000 description 13
- 229930002875 chlorophyll Natural products 0.000 description 13
- 235000019804 chlorophyll Nutrition 0.000 description 13
- 240000008042 Zea mays Species 0.000 description 12
- 235000002017 Zea mays subsp mays Nutrition 0.000 description 12
- 108010031100 chloroplast transit peptides Proteins 0.000 description 12
- 230000006353 environmental stress Effects 0.000 description 12
- 238000002474 experimental method Methods 0.000 description 12
- 108700023157 Galactokinases Proteins 0.000 description 11
- 230000000670 limiting effect Effects 0.000 description 11
- 239000000047 product Substances 0.000 description 11
- 239000013598 vector Substances 0.000 description 11
- 101000910389 Arabidopsis thaliana Cytochrome P450 710A1 Proteins 0.000 description 10
- 101000910388 Arabidopsis thaliana Cytochrome P450 710A2 Proteins 0.000 description 10
- 101000910391 Arabidopsis thaliana Cytochrome P450 710A3 Proteins 0.000 description 10
- 101000910390 Arabidopsis thaliana Cytochrome P450 710A4 Proteins 0.000 description 10
- CURLTUGMZLYLDI-UHFFFAOYSA-N Carbon dioxide Chemical compound O=C=O CURLTUGMZLYLDI-UHFFFAOYSA-N 0.000 description 10
- 102000048120 Galactokinases Human genes 0.000 description 10
- 101710107035 Gamma-glutamyltranspeptidase Proteins 0.000 description 10
- 101710173228 Glutathione hydrolase proenzyme Proteins 0.000 description 10
- 235000010469 Glycine max Nutrition 0.000 description 10
- 101000910385 Solanum lycopersicum Cytochrome P450 710A11 Proteins 0.000 description 10
- 230000015572 biosynthetic process Effects 0.000 description 10
- 102000006640 gamma-Glutamyltransferase Human genes 0.000 description 10
- 229960003180 glutathione Drugs 0.000 description 10
- 210000002706 plastid Anatomy 0.000 description 10
- 230000035882 stress Effects 0.000 description 10
- 241001465754 Metazoa Species 0.000 description 9
- 101100065599 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ERG5 gene Proteins 0.000 description 9
- 101100175428 Synechocystis sp. (strain PCC 6803 / Kazusa) ggt gene Proteins 0.000 description 9
- 239000002773 nucleotide Substances 0.000 description 9
- 125000003729 nucleotide group Chemical group 0.000 description 9
- 230000008685 targeting Effects 0.000 description 9
- 108010024636 Glutathione Proteins 0.000 description 8
- 235000005824 Zea mays ssp. parviglumis Nutrition 0.000 description 8
- 235000013339 cereals Nutrition 0.000 description 8
- 235000005822 corn Nutrition 0.000 description 8
- 230000002829 reductive effect Effects 0.000 description 8
- 244000068988 Glycine max Species 0.000 description 7
- 229910002092 carbon dioxide Inorganic materials 0.000 description 7
- 230000015556 catabolic process Effects 0.000 description 7
- 238000006731 degradation reaction Methods 0.000 description 7
- 235000013305 food Nutrition 0.000 description 7
- 238000009396 hybridization Methods 0.000 description 7
- -1 lipid hydroperoxides Chemical class 0.000 description 7
- 230000037361 pathway Effects 0.000 description 7
- 230000029553 photosynthesis Effects 0.000 description 7
- 238000010672 photosynthesis Methods 0.000 description 7
- 241000894007 species Species 0.000 description 7
- 230000009466 transformation Effects 0.000 description 7
- 241000588724 Escherichia coli Species 0.000 description 6
- 101100322224 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ICL1 gene Proteins 0.000 description 6
- 101710110827 Transaldolase A Proteins 0.000 description 6
- 230000036579 abiotic stress Effects 0.000 description 6
- 230000006978 adaptation Effects 0.000 description 6
- 239000002299 complementary DNA Substances 0.000 description 6
- 230000007423 decrease Effects 0.000 description 6
- 238000011161 development Methods 0.000 description 6
- 230000018109 developmental process Effects 0.000 description 6
- 239000013604 expression vector Substances 0.000 description 6
- 230000004060 metabolic process Effects 0.000 description 6
- 229930027945 nicotinamide-adenine dinucleotide Natural products 0.000 description 6
- 238000007254 oxidation reaction Methods 0.000 description 6
- 238000003786 synthesis reaction Methods 0.000 description 6
- FWMNVWWHGCHHJJ-SKKKGAJSSA-N 4-amino-1-[(2r)-6-amino-2-[[(2r)-2-[[(2r)-2-[[(2r)-2-amino-3-phenylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]hexanoyl]piperidine-4-carboxylic acid Chemical compound C([C@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@H](CCCCN)C(=O)N1CCC(N)(CC1)C(O)=O)NC(=O)[C@H](N)CC=1C=CC=CC=1)C1=CC=CC=C1 FWMNVWWHGCHHJJ-SKKKGAJSSA-N 0.000 description 5
- 102000004190 Enzymes Human genes 0.000 description 5
- 108090000790 Enzymes Proteins 0.000 description 5
- 108700016172 Glutathione peroxidases Proteins 0.000 description 5
- 240000007594 Oryza sativa Species 0.000 description 5
- 235000007164 Oryza sativa Nutrition 0.000 description 5
- 239000001569 carbon dioxide Substances 0.000 description 5
- 230000007613 environmental effect Effects 0.000 description 5
- 229940088598 enzyme Drugs 0.000 description 5
- 238000003306 harvesting Methods 0.000 description 5
- 238000003780 insertion Methods 0.000 description 5
- 230000037431 insertion Effects 0.000 description 5
- 238000005259 measurement Methods 0.000 description 5
- 230000003647 oxidation Effects 0.000 description 5
- 235000009566 rice Nutrition 0.000 description 5
- 239000002689 soil Substances 0.000 description 5
- 210000001519 tissue Anatomy 0.000 description 5
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 4
- 235000006008 Brassica napus var napus Nutrition 0.000 description 4
- 102000006587 Glutathione peroxidase Human genes 0.000 description 4
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 4
- 108010020056 Hydrogenase Proteins 0.000 description 4
- 240000004658 Medicago sativa Species 0.000 description 4
- 229910019142 PO4 Inorganic materials 0.000 description 4
- 235000016383 Zea mays subsp huehuetenangensis Nutrition 0.000 description 4
- XJLXINKUBYWONI-DQQFMEOOSA-N [[(2r,3r,4r,5r)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2s,3r,4s,5s)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate Chemical compound NC(=O)C1=CC=C[N+]([C@@H]2[C@H]([C@@H](O)[C@H](COP([O-])(=O)OP(O)(=O)OC[C@@H]3[C@H]([C@@H](OP(O)(O)=O)[C@@H](O3)N3C4=NC=NC(N)=C4N=C3)O)O2)O)=C1 XJLXINKUBYWONI-DQQFMEOOSA-N 0.000 description 4
- 230000008859 change Effects 0.000 description 4
- 230000000875 corresponding effect Effects 0.000 description 4
- 244000038559 crop plants Species 0.000 description 4
- 235000015872 dietary supplement Nutrition 0.000 description 4
- 230000006870 function Effects 0.000 description 4
- 239000001257 hydrogen Substances 0.000 description 4
- 229910052739 hydrogen Inorganic materials 0.000 description 4
- 230000006872 improvement Effects 0.000 description 4
- 235000009973 maize Nutrition 0.000 description 4
- 238000004519 manufacturing process Methods 0.000 description 4
- 230000001590 oxidative effect Effects 0.000 description 4
- 230000036542 oxidative stress Effects 0.000 description 4
- 239000010452 phosphate Substances 0.000 description 4
- 238000003259 recombinant expression Methods 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- 230000005068 transpiration Effects 0.000 description 4
- 229920000742 Cotton Polymers 0.000 description 3
- 108010053070 Glutathione Disulfide Proteins 0.000 description 3
- 102100033366 Glutathione hydrolase 1 proenzyme Human genes 0.000 description 3
- 244000299507 Gossypium hirsutum Species 0.000 description 3
- 101000997558 Homo sapiens Glutathione hydrolase 1 proenzyme Proteins 0.000 description 3
- 101000926208 Homo sapiens Inactive glutathione hydrolase 2 Proteins 0.000 description 3
- 102100034061 Inactive glutathione hydrolase 2 Human genes 0.000 description 3
- 235000017587 Medicago sativa ssp. sativa Nutrition 0.000 description 3
- 108091028043 Nucleic acid sequence Proteins 0.000 description 3
- 108010003581 Ribulose-bisphosphate carboxylase Proteins 0.000 description 3
- OUUQCZGPVNCOIJ-UHFFFAOYSA-M Superoxide Chemical compound [O-][O] OUUQCZGPVNCOIJ-UHFFFAOYSA-M 0.000 description 3
- 235000021307 Triticum Nutrition 0.000 description 3
- 244000098338 Triticum aestivum Species 0.000 description 3
- 108090000848 Ubiquitin Proteins 0.000 description 3
- 102000044159 Ubiquitin Human genes 0.000 description 3
- 238000010521 absorption reaction Methods 0.000 description 3
- 230000009471 action Effects 0.000 description 3
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 description 3
- 102000023732 binding proteins Human genes 0.000 description 3
- 108091008324 binding proteins Proteins 0.000 description 3
- 150000001720 carbohydrates Chemical class 0.000 description 3
- 235000014633 carbohydrates Nutrition 0.000 description 3
- 230000001413 cellular effect Effects 0.000 description 3
- 238000006243 chemical reaction Methods 0.000 description 3
- 229930002868 chlorophyll a Natural products 0.000 description 3
- 229930002869 chlorophyll b Natural products 0.000 description 3
- NSMUHPMZFPKNMZ-VBYMZDBQSA-M chlorophyll b Chemical compound C1([C@@H](C(=O)OC)C(=O)C2=C3C)=C2N2C3=CC(C(CC)=C3C=O)=[N+]4C3=CC3=C(C=C)C(C)=C5N3[Mg-2]42[N+]2=C1[C@@H](CCC(=O)OC\C=C(/C)CCC[C@H](C)CCC[C@H](C)CCCC(C)C)[C@H](C)C2=C5 NSMUHPMZFPKNMZ-VBYMZDBQSA-M 0.000 description 3
- 239000000835 fiber Substances 0.000 description 3
- 229930182830 galactose Natural products 0.000 description 3
- YPZRWBKMTBYPTK-BJDJZHNGSA-N glutathione disulfide Chemical compound OC(=O)[C@@H](N)CCC(=O)N[C@H](C(=O)NCC(O)=O)CSSC[C@@H](C(=O)NCC(O)=O)NC(=O)CC[C@H](N)C(O)=O YPZRWBKMTBYPTK-BJDJZHNGSA-N 0.000 description 3
- 230000034659 glycolysis Effects 0.000 description 3
- 150000002632 lipids Chemical class 0.000 description 3
- 239000012528 membrane Substances 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- BOPGDPNILDQYTO-NNYOXOHSSA-N nicotinamide-adenine dinucleotide Chemical compound C1=CCC(C(=O)N)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OC[C@@H]2[C@H]([C@@H](O)[C@@H](O2)N2C3=NC=NC(N)=C3N=C2)O)O1 BOPGDPNILDQYTO-NNYOXOHSSA-N 0.000 description 3
- 239000001301 oxygen Substances 0.000 description 3
- 229910052760 oxygen Inorganic materials 0.000 description 3
- 230000009467 reduction Effects 0.000 description 3
- 230000001105 regulatory effect Effects 0.000 description 3
- 239000003352 sequestering agent Substances 0.000 description 3
- 238000013518 transcription Methods 0.000 description 3
- 230000035897 transcription Effects 0.000 description 3
- 230000001131 transforming effect Effects 0.000 description 3
- 108010020183 3-phosphoshikimate 1-carboxyvinyltransferase Proteins 0.000 description 2
- 102000007469 Actins Human genes 0.000 description 2
- 108010085238 Actins Proteins 0.000 description 2
- 241000589158 Agrobacterium Species 0.000 description 2
- 101100391724 Arabidopsis thaliana GGT3 gene Proteins 0.000 description 2
- 101100391725 Arabidopsis thaliana GGT4 gene Proteins 0.000 description 2
- CIWBSHSKHKDKBQ-JLAZNSOCSA-N Ascorbic acid Chemical compound OC[C@H](O)[C@H]1OC(=O)C(O)=C1O CIWBSHSKHKDKBQ-JLAZNSOCSA-N 0.000 description 2
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- 241000972773 Aulopiformes Species 0.000 description 2
- 235000014698 Brassica juncea var multisecta Nutrition 0.000 description 2
- 240000002791 Brassica napus Species 0.000 description 2
- 240000000385 Brassica napus var. napus Species 0.000 description 2
- 235000011299 Brassica oleracea var botrytis Nutrition 0.000 description 2
- 240000003259 Brassica oleracea var. botrytis Species 0.000 description 2
- 235000006618 Brassica rapa subsp oleifera Nutrition 0.000 description 2
- 235000004977 Brassica sinapistrum Nutrition 0.000 description 2
- 108091026890 Coding region Proteins 0.000 description 2
- 241000220485 Fabaceae Species 0.000 description 2
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 2
- 101000926206 Homo sapiens Putative glutathione hydrolase 3 proenzyme Proteins 0.000 description 2
- 240000005979 Hordeum vulgare Species 0.000 description 2
- 235000007340 Hordeum vulgare Nutrition 0.000 description 2
- 206010020649 Hyperkeratosis Diseases 0.000 description 2
- 108010026217 Malate Dehydrogenase Proteins 0.000 description 2
- 102000013460 Malate Dehydrogenase Human genes 0.000 description 2
- 101001009581 Molluscum contagiosum virus subtype 1 Glutathione peroxidase Proteins 0.000 description 2
- 235000002637 Nicotiana tabacum Nutrition 0.000 description 2
- 244000061176 Nicotiana tabacum Species 0.000 description 2
- 108091005461 Nucleic proteins Proteins 0.000 description 2
- 244000062780 Petroselinum sativum Species 0.000 description 2
- 102100034060 Putative glutathione hydrolase 3 proenzyme Human genes 0.000 description 2
- LCTONWCANYUPML-UHFFFAOYSA-M Pyruvate Chemical compound CC(=O)C([O-])=O LCTONWCANYUPML-UHFFFAOYSA-M 0.000 description 2
- 244000062793 Sorghum vulgare Species 0.000 description 2
- 241000192581 Synechocystis sp. Species 0.000 description 2
- 102000002933 Thioredoxin Human genes 0.000 description 2
- 108020004530 Transaldolase Proteins 0.000 description 2
- 102100028601 Transaldolase Human genes 0.000 description 2
- 235000010749 Vicia faba Nutrition 0.000 description 2
- 240000006677 Vicia faba Species 0.000 description 2
- ZSLZBFCDCINBPY-ZSJPKINUSA-N acetyl-CoA Chemical compound O[C@@H]1[C@H](OP(O)(O)=O)[C@@H](COP(O)(=O)OP(O)(=O)OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)C)O[C@H]1N1C2=NC=NC(N)=C2N=C1 ZSLZBFCDCINBPY-ZSJPKINUSA-N 0.000 description 2
- 239000002253 acid Substances 0.000 description 2
- 230000002411 adverse Effects 0.000 description 2
- 230000004075 alteration Effects 0.000 description 2
- 125000000539 amino acid group Chemical group 0.000 description 2
- 238000004458 analytical method Methods 0.000 description 2
- 230000001580 bacterial effect Effects 0.000 description 2
- 230000008901 benefit Effects 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 238000012512 characterization method Methods 0.000 description 2
- 239000007795 chemical reaction product Substances 0.000 description 2
- 235000019693 cherries Nutrition 0.000 description 2
- 239000002537 cosmetic Substances 0.000 description 2
- 230000006378 damage Effects 0.000 description 2
- 239000000284 extract Substances 0.000 description 2
- 238000012239 gene modification Methods 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 230000005017 genetic modification Effects 0.000 description 2
- 235000013617 genetically modified food Nutrition 0.000 description 2
- 239000008103 glucose Substances 0.000 description 2
- 230000035430 glutathionylation Effects 0.000 description 2
- 229910001385 heavy metal Inorganic materials 0.000 description 2
- 238000003384 imaging method Methods 0.000 description 2
- 230000014759 maintenance of location Effects 0.000 description 2
- 239000002207 metabolite Substances 0.000 description 2
- 235000016709 nutrition Nutrition 0.000 description 2
- 230000035764 nutrition Effects 0.000 description 2
- 239000003921 oil Substances 0.000 description 2
- 235000019198 oils Nutrition 0.000 description 2
- 210000000056 organ Anatomy 0.000 description 2
- 239000002245 particle Substances 0.000 description 2
- 244000052769 pathogen Species 0.000 description 2
- 230000004108 pentose phosphate pathway Effects 0.000 description 2
- 235000011197 perejil Nutrition 0.000 description 2
- 239000000825 pharmaceutical preparation Substances 0.000 description 2
- 229940127557 pharmaceutical product Drugs 0.000 description 2
- 230000000243 photosynthetic effect Effects 0.000 description 2
- 239000011505 plaster Substances 0.000 description 2
- 230000008488 polyadenylation Effects 0.000 description 2
- 230000008569 process Effects 0.000 description 2
- 238000006479 redox reaction Methods 0.000 description 2
- 230000029058 respiratory gaseous exchange Effects 0.000 description 2
- 230000004044 response Effects 0.000 description 2
- 235000019515 salmon Nutrition 0.000 description 2
- 238000005204 segregation Methods 0.000 description 2
- 230000009758 senescence Effects 0.000 description 2
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 2
- 235000000346 sugar Nutrition 0.000 description 2
- 239000013589 supplement Substances 0.000 description 2
- 108060008226 thioredoxin Proteins 0.000 description 2
- 229940094937 thioredoxin Drugs 0.000 description 2
- 238000012546 transfer Methods 0.000 description 2
- 230000017260 vegetative to reproductive phase transition of meristem Effects 0.000 description 2
- OKERTILEQIBWJW-UHFFFAOYSA-N 1-hydroxypropane-1,2,3-tricarboxylic acid oxaldehydic acid Chemical compound OC(=O)C=O.OC(=O)C(O)C(C(O)=O)CC(O)=O OKERTILEQIBWJW-UHFFFAOYSA-N 0.000 description 1
- 108010030844 2-methylcitrate synthase Proteins 0.000 description 1
- 102100038222 60 kDa heat shock protein, mitochondrial Human genes 0.000 description 1
- 101710154868 60 kDa heat shock protein, mitochondrial Proteins 0.000 description 1
- 108091006112 ATPases Proteins 0.000 description 1
- 108010009924 Aconitate hydratase Proteins 0.000 description 1
- 102000057290 Adenosine Triphosphatases Human genes 0.000 description 1
- ZKHQWZAMYRWXGA-KQYNXXCUSA-N Adenosine triphosphate Chemical compound C1=NC=2C(N)=NC=NC=2N1[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O ZKHQWZAMYRWXGA-KQYNXXCUSA-N 0.000 description 1
- ZKHQWZAMYRWXGA-UHFFFAOYSA-N Adenosine triphosphate Natural products C1=NC=2C(N)=NC=NC=2N1C1OC(COP(O)(=O)OP(O)(=O)OP(O)(O)=O)C(O)C1O ZKHQWZAMYRWXGA-UHFFFAOYSA-N 0.000 description 1
- 244000144730 Amygdalus persica Species 0.000 description 1
- 241000208173 Apiaceae Species 0.000 description 1
- 240000007087 Apium graveolens Species 0.000 description 1
- 235000015849 Apium graveolens Dulce Group Nutrition 0.000 description 1
- 235000010591 Appio Nutrition 0.000 description 1
- 241000219195 Arabidopsis thaliana Species 0.000 description 1
- 244000105624 Arachis hypogaea Species 0.000 description 1
- 241000208838 Asteraceae Species 0.000 description 1
- 235000007319 Avena orientalis Nutrition 0.000 description 1
- 244000075850 Avena orientalis Species 0.000 description 1
- 235000016068 Berberis vulgaris Nutrition 0.000 description 1
- 241000335053 Beta vulgaris Species 0.000 description 1
- 241000167854 Bourreria succulenta Species 0.000 description 1
- 235000011331 Brassica Nutrition 0.000 description 1
- 241000219198 Brassica Species 0.000 description 1
- 240000007124 Brassica oleracea Species 0.000 description 1
- 235000003899 Brassica oleracea var acephala Nutrition 0.000 description 1
- 235000011301 Brassica oleracea var capitata Nutrition 0.000 description 1
- 235000017647 Brassica oleracea var italica Nutrition 0.000 description 1
- 235000001169 Brassica oleracea var oleracea Nutrition 0.000 description 1
- 241000219193 Brassicaceae Species 0.000 description 1
- 235000004936 Bromus mango Nutrition 0.000 description 1
- KSFOVUSSGSKXFI-GAQDCDSVSA-N CC1=C/2NC(\C=C3/N=C(/C=C4\N\C(=C/C5=N/C(=C\2)/C(C=C)=C5C)C(C=C)=C4C)C(C)=C3CCC(O)=O)=C1CCC(O)=O Chemical compound CC1=C/2NC(\C=C3/N=C(/C=C4\N\C(=C/C5=N/C(=C\2)/C(C=C)=C5C)C(C=C)=C4C)C(C)=C3CCC(O)=O)=C1CCC(O)=O KSFOVUSSGSKXFI-GAQDCDSVSA-N 0.000 description 1
- 235000002566 Capsicum Nutrition 0.000 description 1
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 1
- 235000009467 Carica papaya Nutrition 0.000 description 1
- 240000006432 Carica papaya Species 0.000 description 1
- 241000218645 Cedrus Species 0.000 description 1
- 108010061190 Cinnamyl-alcohol dehydrogenase Proteins 0.000 description 1
- 108010071536 Citrate (Si)-synthase Proteins 0.000 description 1
- 102000006732 Citrate synthase Human genes 0.000 description 1
- 108020004705 Codon Proteins 0.000 description 1
- 108700010070 Codon Usage Proteins 0.000 description 1
- 108020004635 Complementary DNA Proteins 0.000 description 1
- 108091035707 Consensus sequence Proteins 0.000 description 1
- 206010010774 Constipation Diseases 0.000 description 1
- 235000017788 Cydonia oblonga Nutrition 0.000 description 1
- 102000002004 Cytochrome P-450 Enzyme System Human genes 0.000 description 1
- 108010015742 Cytochrome P-450 Enzyme System Proteins 0.000 description 1
- 102100039868 Cytoplasmic aconitate hydratase Human genes 0.000 description 1
- GSXOAOHZAIYLCY-UHFFFAOYSA-N D-F6P Natural products OCC(=O)C(O)C(O)C(O)COP(O)(O)=O GSXOAOHZAIYLCY-UHFFFAOYSA-N 0.000 description 1
- NGHMDNPXVRFFGS-IUYQGCFVSA-N D-erythrose 4-phosphate Chemical compound O=C[C@H](O)[C@H](O)COP(O)(O)=O NGHMDNPXVRFFGS-IUYQGCFVSA-N 0.000 description 1
- WQZGKKKJIJFFOK-QTVWNMPRSA-N D-mannopyranose Chemical compound OC[C@H]1OC(O)[C@@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-QTVWNMPRSA-N 0.000 description 1
- 108010066133 D-octopine dehydrogenase Proteins 0.000 description 1
- HMFHBZSHGGEWLO-SOOFDHNKSA-N D-ribofuranose Chemical compound OC[C@H]1OC(O)[C@H](O)[C@@H]1O HMFHBZSHGGEWLO-SOOFDHNKSA-N 0.000 description 1
- YAHZABJORDUQGO-NQXXGFSBSA-N D-ribulose 1,5-bisphosphate Chemical compound OP(=O)(O)OC[C@@H](O)[C@@H](O)C(=O)COP(O)(O)=O YAHZABJORDUQGO-NQXXGFSBSA-N 0.000 description 1
- 235000002767 Daucus carota Nutrition 0.000 description 1
- 244000000626 Daucus carota Species 0.000 description 1
- 101150098080 ERG5 gene Proteins 0.000 description 1
- 241000150392 Fig mosaic emaravirus Species 0.000 description 1
- 229930091371 Fructose Natural products 0.000 description 1
- RFSUNEUAIZKAJO-ARQDHWQXSA-N Fructose Chemical compound OC[C@H]1O[C@](O)(CO)[C@@H](O)[C@@H]1O RFSUNEUAIZKAJO-ARQDHWQXSA-N 0.000 description 1
- 239000005715 Fructose Substances 0.000 description 1
- VZCYOOQTPOCHFL-OWOJBTEDSA-N Fumaric acid Chemical compound OC(=O)\C=C\C(O)=O VZCYOOQTPOCHFL-OWOJBTEDSA-N 0.000 description 1
- 102000002464 Galactosidases Human genes 0.000 description 1
- 108010093031 Galactosidases Proteins 0.000 description 1
- 101710137788 Glyceraldehyde-3-phosphate dehydrogenase B Proteins 0.000 description 1
- 102000004327 Glycine dehydrogenase (decarboxylating) Human genes 0.000 description 1
- 108090000826 Glycine dehydrogenase (decarboxylating) Proteins 0.000 description 1
- 108010043428 Glycine hydroxymethyltransferase Proteins 0.000 description 1
- 244000020551 Helianthus annuus Species 0.000 description 1
- 235000003222 Helianthus annuus Nutrition 0.000 description 1
- 235000015847 Hesperis matronalis Nutrition 0.000 description 1
- 240000004533 Hesperis matronalis Species 0.000 description 1
- 102000012011 Isocitrate Dehydrogenase Human genes 0.000 description 1
- 108010075869 Isocitrate Dehydrogenase Proteins 0.000 description 1
- JVTAAEKCZFNVCJ-UHFFFAOYSA-M Lactate Chemical compound CC(O)C([O-])=O JVTAAEKCZFNVCJ-UHFFFAOYSA-M 0.000 description 1
- 235000003228 Lactuca sativa Nutrition 0.000 description 1
- 240000008415 Lactuca sativa Species 0.000 description 1
- 108010034715 Light-Harvesting Protein Complexes Proteins 0.000 description 1
- 235000007688 Lycopersicon esculentum Nutrition 0.000 description 1
- 244000081841 Malus domestica Species 0.000 description 1
- 235000011430 Malus pumila Nutrition 0.000 description 1
- 235000015103 Malus silvestris Nutrition 0.000 description 1
- 241000219071 Malvaceae Species 0.000 description 1
- 235000014826 Mangifera indica Nutrition 0.000 description 1
- 240000007228 Mangifera indica Species 0.000 description 1
- 235000010624 Medicago sativa Nutrition 0.000 description 1
- 101000598243 Nicotiana tabacum Probable aquaporin TIP-type RB7-18C Proteins 0.000 description 1
- 101000655028 Nicotiana tabacum Probable aquaporin TIP-type RB7-5A Proteins 0.000 description 1
- 108091034117 Oligonucleotide Proteins 0.000 description 1
- 108700026244 Open Reading Frames Proteins 0.000 description 1
- 239000006002 Pepper Substances 0.000 description 1
- 108010081996 Photosystem I Protein Complex Proteins 0.000 description 1
- 108010060806 Photosystem II Protein Complex Proteins 0.000 description 1
- 235000008331 Pinus X rigitaeda Nutrition 0.000 description 1
- 241000018646 Pinus brutia Species 0.000 description 1
- 235000011613 Pinus brutia Nutrition 0.000 description 1
- 235000016761 Piper aduncum Nutrition 0.000 description 1
- 240000003889 Piper guineense Species 0.000 description 1
- 235000017804 Piper guineense Nutrition 0.000 description 1
- 235000008184 Piper nigrum Nutrition 0.000 description 1
- 235000010582 Pisum sativum Nutrition 0.000 description 1
- 240000004713 Pisum sativum Species 0.000 description 1
- 108700001094 Plant Genes Proteins 0.000 description 1
- 108090000051 Plastocyanin Proteins 0.000 description 1
- 241000219000 Populus Species 0.000 description 1
- 235000006029 Prunus persica var nucipersica Nutrition 0.000 description 1
- 235000006040 Prunus persica var persica Nutrition 0.000 description 1
- 244000017714 Prunus persica var. nucipersica Species 0.000 description 1
- 235000014443 Pyrus communis Nutrition 0.000 description 1
- 241000219492 Quercus Species 0.000 description 1
- 101100437728 Rattus norvegicus Bloc1s2 gene Proteins 0.000 description 1
- 108020004511 Recombinant DNA Proteins 0.000 description 1
- PYMYPHUHKUWMLA-LMVFSUKVSA-N Ribose Natural products OC[C@@H](O)[C@@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-LMVFSUKVSA-N 0.000 description 1
- 101710192640 Ribulose bisphosphate carboxylase/oxygenase activase Proteins 0.000 description 1
- 101710153769 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic Proteins 0.000 description 1
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 1
- 240000000111 Saccharum officinarum Species 0.000 description 1
- 235000007201 Saccharum officinarum Nutrition 0.000 description 1
- 244000082988 Secale cereale Species 0.000 description 1
- 235000007238 Secale cereale Nutrition 0.000 description 1
- 208000036366 Sensation of pressure Diseases 0.000 description 1
- 241001116459 Sequoia Species 0.000 description 1
- 102000019394 Serine hydroxymethyltransferases Human genes 0.000 description 1
- 241000208292 Solanaceae Species 0.000 description 1
- 240000003768 Solanum lycopersicum Species 0.000 description 1
- 235000002597 Solanum melongena Nutrition 0.000 description 1
- 244000061458 Solanum melongena Species 0.000 description 1
- 235000002595 Solanum tuberosum Nutrition 0.000 description 1
- 244000061456 Solanum tuberosum Species 0.000 description 1
- 235000011684 Sorghum saccharatum Nutrition 0.000 description 1
- 235000009184 Spondias indica Nutrition 0.000 description 1
- 229930182558 Sterol Natural products 0.000 description 1
- 102000019197 Superoxide Dismutase Human genes 0.000 description 1
- 108010012715 Superoxide dismutase Proteins 0.000 description 1
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical class O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 description 1
- 108091023040 Transcription factor Proteins 0.000 description 1
- 102000040945 Transcription factor Human genes 0.000 description 1
- 102000014701 Transketolase Human genes 0.000 description 1
- 108010043652 Transketolase Proteins 0.000 description 1
- 235000019714 Triticale Nutrition 0.000 description 1
- 108010075344 Tryptophan synthase Proteins 0.000 description 1
- 102100021436 UDP-glucose 4-epimerase Human genes 0.000 description 1
- 108010075202 UDP-glucose 4-epimerase Proteins 0.000 description 1
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical class O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 description 1
- 230000003044 adaptive effect Effects 0.000 description 1
- HMFHBZSHGGEWLO-UHFFFAOYSA-N alpha-D-Furanose-Ribose Natural products OCC1OC(O)C(O)C1O HMFHBZSHGGEWLO-UHFFFAOYSA-N 0.000 description 1
- HXXFSFRBOHSIMQ-FPRJBGLDSA-N alpha-D-galactose 1-phosphate Chemical compound OC[C@H]1O[C@H](OP(O)(O)=O)[C@H](O)[C@@H](O)[C@H]1O HXXFSFRBOHSIMQ-FPRJBGLDSA-N 0.000 description 1
- HXXFSFRBOHSIMQ-VFUOTHLCSA-N alpha-D-glucose 1-phosphate Chemical compound OC[C@H]1O[C@H](OP(O)(O)=O)[C@H](O)[C@@H](O)[C@@H]1O HXXFSFRBOHSIMQ-VFUOTHLCSA-N 0.000 description 1
- 230000009604 anaerobic growth Effects 0.000 description 1
- 230000000692 anti-sense effect Effects 0.000 description 1
- 229940072107 ascorbate Drugs 0.000 description 1
- 235000010323 ascorbic acid Nutrition 0.000 description 1
- 239000011668 ascorbic acid Substances 0.000 description 1
- BGWGXPAPYGQALX-ARQDHWQXSA-N beta-D-fructofuranose 6-phosphate Chemical compound OC[C@@]1(O)O[C@H](COP(O)(O)=O)[C@@H](O)[C@@H]1O BGWGXPAPYGQALX-ARQDHWQXSA-N 0.000 description 1
- 230000008238 biochemical pathway Effects 0.000 description 1
- 238000007622 bioinformatic analysis Methods 0.000 description 1
- 238000009395 breeding Methods 0.000 description 1
- 230000001488 breeding effect Effects 0.000 description 1
- 239000006227 byproduct Substances 0.000 description 1
- 230000030833 cell death Effects 0.000 description 1
- 230000024245 cell differentiation Effects 0.000 description 1
- 210000000170 cell membrane Anatomy 0.000 description 1
- 230000019522 cellular metabolic process Effects 0.000 description 1
- 230000005754 cellular signaling Effects 0.000 description 1
- 239000012707 chemical precursor Substances 0.000 description 1
- 230000002759 chromosomal effect Effects 0.000 description 1
- 210000000349 chromosome Anatomy 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- 230000002596 correlated effect Effects 0.000 description 1
- 230000001186 cumulative effect Effects 0.000 description 1
- 125000004122 cyclic group Chemical group 0.000 description 1
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 1
- 210000000172 cytosol Anatomy 0.000 description 1
- GVJHHUAWPYXKBD-UHFFFAOYSA-N d-alpha-tocopherol Natural products OC1=C(C)C(C)=C2OC(CCCC(C)CCCC(C)CCCC(C)C)(C)CCC2=C1C GVJHHUAWPYXKBD-UHFFFAOYSA-N 0.000 description 1
- 230000006735 deficit Effects 0.000 description 1
- 230000001687 destabilization Effects 0.000 description 1
- 238000009826 distribution Methods 0.000 description 1
- 235000013399 edible fruits Nutrition 0.000 description 1
- 238000004520 electroporation Methods 0.000 description 1
- 210000002257 embryonic structure Anatomy 0.000 description 1
- 210000002472 endoplasmic reticulum Anatomy 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 239000003623 enhancer Substances 0.000 description 1
- 230000008686 ergosterol biosynthesis Effects 0.000 description 1
- 239000003925 fat Substances 0.000 description 1
- 235000019197 fats Nutrition 0.000 description 1
- 230000032111 floral organ development Effects 0.000 description 1
- 239000004459 forage Substances 0.000 description 1
- 230000005078 fruit development Effects 0.000 description 1
- 239000000446 fuel Substances 0.000 description 1
- 125000002642 gamma-glutamyl group Chemical group 0.000 description 1
- 238000010353 genetic engineering Methods 0.000 description 1
- 229950010772 glucose-1-phosphate Drugs 0.000 description 1
- 125000000291 glutamic acid group Chemical group N[C@@H](CCC(O)=O)C(=O)* 0.000 description 1
- 229940045883 glutathione disulfide Drugs 0.000 description 1
- SYUXAJSOZXEFPP-UHFFFAOYSA-N glutin Natural products COc1c(O)cc2OC(=CC(=O)c2c1O)c3ccccc3OC4OC(CO)C(O)C(O)C4O SYUXAJSOZXEFPP-UHFFFAOYSA-N 0.000 description 1
- HHLFWLYXYJOTON-UHFFFAOYSA-N glyoxylic acid Chemical compound OC(=O)C=O HHLFWLYXYJOTON-UHFFFAOYSA-N 0.000 description 1
- 239000001963 growth medium Substances 0.000 description 1
- 239000000852 hydrogen donor Substances 0.000 description 1
- 230000000415 inactivating effect Effects 0.000 description 1
- 230000004941 influx Effects 0.000 description 1
- 230000000977 initiatory effect Effects 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- 230000002427 irreversible effect Effects 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 230000005087 leaf formation Effects 0.000 description 1
- 235000021374 legumes Nutrition 0.000 description 1
- 239000003446 ligand Substances 0.000 description 1
- 230000003859 lipid peroxidation Effects 0.000 description 1
- 239000003550 marker Substances 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 239000011159 matrix material Substances 0.000 description 1
- 230000000442 meristematic effect Effects 0.000 description 1
- 230000002503 metabolic effect Effects 0.000 description 1
- 238000006241 metabolic reaction Methods 0.000 description 1
- 229910052751 metal Inorganic materials 0.000 description 1
- 239000002184 metal Substances 0.000 description 1
- 235000019713 millet Nutrition 0.000 description 1
- 239000011707 mineral Substances 0.000 description 1
- 235000010755 mineral Nutrition 0.000 description 1
- 230000002438 mitochondrial effect Effects 0.000 description 1
- 238000007479 molecular analysis Methods 0.000 description 1
- 238000001823 molecular biology technique Methods 0.000 description 1
- 230000017074 necrotic cell death Effects 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 108010058731 nopaline synthase Proteins 0.000 description 1
- 238000007899 nucleic acid hybridization Methods 0.000 description 1
- 150000002894 organic compounds Chemical class 0.000 description 1
- 230000003204 osmotic effect Effects 0.000 description 1
- 230000002018 overexpression Effects 0.000 description 1
- 230000004792 oxidative damage Effects 0.000 description 1
- 235000020232 peanut Nutrition 0.000 description 1
- 230000008447 perception Effects 0.000 description 1
- 230000002093 peripheral effect Effects 0.000 description 1
- 150000002978 peroxides Chemical class 0.000 description 1
- 230000027870 phototropism Effects 0.000 description 1
- 210000000745 plant chromosome Anatomy 0.000 description 1
- 239000000419 plant extract Substances 0.000 description 1
- 230000008635 plant growth Effects 0.000 description 1
- 229920000642 polymer Polymers 0.000 description 1
- 230000002028 premature Effects 0.000 description 1
- 210000001938 protoplast Anatomy 0.000 description 1
- 229950003776 protoporphyrin Drugs 0.000 description 1
- 230000009257 reactivity Effects 0.000 description 1
- 238000010188 recombinant method Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 238000005215 recombination Methods 0.000 description 1
- 230000008439 repair process Effects 0.000 description 1
- 230000003362 replicative effect Effects 0.000 description 1
- 230000035806 respiratory chain Effects 0.000 description 1
- 230000027756 respiratory electron transport chain Effects 0.000 description 1
- 230000025469 response to water deprivation Effects 0.000 description 1
- 230000002441 reversible effect Effects 0.000 description 1
- 230000002786 root growth Effects 0.000 description 1
- 239000000523 sample Substances 0.000 description 1
- 229920006395 saturated elastomer Polymers 0.000 description 1
- JDTUMPKOJBQPKX-GBNDHIKLSA-N sedoheptulose 7-phosphate Chemical compound OCC(=O)[C@@H](O)[C@H](O)[C@H](O)[C@H](O)COP(O)(O)=O JDTUMPKOJBQPKX-GBNDHIKLSA-N 0.000 description 1
- 238000009394 selective breeding Methods 0.000 description 1
- 230000009919 sequestration Effects 0.000 description 1
- 230000035939 shock Effects 0.000 description 1
- 239000004460 silage Substances 0.000 description 1
- 238000009331 sowing Methods 0.000 description 1
- 238000012109 statistical procedure Methods 0.000 description 1
- 125000002328 sterol group Chemical group 0.000 description 1
- 150000003432 sterols Chemical class 0.000 description 1
- 235000003702 sterols Nutrition 0.000 description 1
- 238000003860 storage Methods 0.000 description 1
- 150000008163 sugars Chemical class 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 125000003396 thiol group Chemical group [H]S* 0.000 description 1
- 150000003573 thiols Chemical class 0.000 description 1
- 235000010384 tocopherol Nutrition 0.000 description 1
- 229960001295 tocopherol Drugs 0.000 description 1
- 229930003799 tocopherol Natural products 0.000 description 1
- 239000011732 tocopherol Substances 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 239000003053 toxin Substances 0.000 description 1
- 231100000765 toxin Toxicity 0.000 description 1
- 108700012359 toxins Proteins 0.000 description 1
- VZCYOOQTPOCHFL-UHFFFAOYSA-N trans-butenedioic acid Natural products OC(=O)C=CC(O)=O VZCYOOQTPOCHFL-UHFFFAOYSA-N 0.000 description 1
- 238000010361 transduction Methods 0.000 description 1
- 230000026683 transduction Effects 0.000 description 1
- 238000001890 transfection Methods 0.000 description 1
- 238000006276 transfer reaction Methods 0.000 description 1
- 238000011426 transformation method Methods 0.000 description 1
- 238000012250 transgenic expression Methods 0.000 description 1
- 230000032258 transport Effects 0.000 description 1
- 238000011282 treatment Methods 0.000 description 1
- 210000003934 vacuole Anatomy 0.000 description 1
- 235000013343 vitamin Nutrition 0.000 description 1
- 239000011782 vitamin Substances 0.000 description 1
- 229940088594 vitamin Drugs 0.000 description 1
- 229930003231 vitamin Natural products 0.000 description 1
- 241000228158 x Triticosecale Species 0.000 description 1
- 101150020580 yap1 gene Proteins 0.000 description 1
- 238000004383 yellowing Methods 0.000 description 1
- GVJHHUAWPYXKBD-IEOSBIPESA-N α-tocopherol Chemical compound OC1=C(C)C(C)=C2O[C@@](CCC[C@H](C)CCC[C@H](C)CCCC(C)C)(C)CCC2=C1C GVJHHUAWPYXKBD-IEOSBIPESA-N 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
- C12N15/8273—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for drought, cold, salt resistance
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A40/00—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production
- Y02A40/10—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production in agriculture
- Y02A40/146—Genetically Modified [GMO] plants, e.g. transgenic plants
Landscapes
- Genetics & Genomics (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Organic Chemistry (AREA)
- Biomedical Technology (AREA)
- Chemical & Material Sciences (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- Physics & Mathematics (AREA)
- Plant Pathology (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Cell Biology (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Abstract
Polynucleotides are disclosed which are capable of enhancing yield of a plant transformed to contain such polynucleotides. Also provided are methods of using such polynucleotides, and transgenic plants and agricultural products, including seeds, containing such polynucleotides as transgenes.
Description
TRANSGENIC PLANTS WITH ALTERATED AND MAJOR REDOX MECHANISMS
PERFORMANCE
i
FIELD OF THE INVENTION
The present application claims the priority benefit of the US provisional patent application number 61 / 162,427, filed on March 23, 2009, the content of which is hereby incorporated by reference in its entirety. j
BACKGROUND OF THE INVENTION
In recent years, population growth and climate change have highlighted the possibility of shortages of food for humans, animal feed and fuel worldwide. Agriculture consumes 70% of the water that people use, while rainfall decreases in many parts of the world. In addition, because the use of land changes from farms to towns and suburbs, there are fewer hectares of arable land available for the development of agricultural crops. Agricultural biotechnology has attempted to meet the growing needs of men through genetic modifications of plants that could increase crop yields, for example by conferring better tolerance to responses to abiotic stress or increasing biomass. .
At present, crop yield is defined as the number of bushels of relevant agricultural product (such as grain, fodder or seed) harvested per acre. The different types of abiotic stress, such as stress due to drought, heat, salinidation and cold, and the size (biomass) of the plant impact on crop yield. The traditional strategies of plant reproduction are relatively slow and, in general, failed to confer greater tolerance to abiotic stress. In the case of corn, improvements in grain yield through traditional breeding have practically stagnated. In the last hundred years, the maize harvest index, that is, the ratio between yield biomass and total cumulative biomass during harvest, has practically not changed during selective breeding for grain yield. Accordingly, the recent yield improvements in maize are the result of increased production of total biomass per unit of land area. The increase in total biomass was achieved by increasing the density of the plantation, which generated adaptive phenotypic alterations, such as reduction of the angle of the leaf, which can reduce the shade of the
lower leaves, and the size of the male inflorescences of corn, which can increase the harvest index.
When soil water runs out or there is no water available during periods of drought, crop yields decrease. Water deficit occurs in the plants if the transpiration of the leaves exceeds the supply of water from the roots. The available water supply is related to the amount of water in the soil and the ability of the plant to reach the water with its root system. The transpiration of water from the leaves is linked to the fixation of carbon dioxide through photosynthesis through stomata. The two processes correlate positively, so that the high influx of carbon dioxide by photosynthesis is closely linked to the loss of water by transpiration. As the leaf transpires water, the water potential of the leaf is reduced and the stomas tend to close in a hydraulic process that limits the amount of
i
photosynthesis. Because the yield of crops depends on the fixation of carbon dioxide in photosynthesis, water absorption and transpiration are factors that contribute to crop yields. Plants able to use less water to fix the same amount of carbon dioxide or to operate normally with a lower water potential can generate more photosynthesis and, therefore, produce more biomass and economic yield in many agricultural systems.
Agricultural biotechnologists used trials in model plant systems, greenhouse studies of crop plants and field trials in an attempt to develop transgenic plants that exhibited higher yields, either by increasing tolerance to abiotic stress or increasing biomass . For example, water use efficiency (WUE) is a parameter that is often correlated with tolerance to drought. Studies of the plant's response to dehydration, osmotic shock, and extreme temperatures are also used to determine the tolerance or resistance of the plant to abiotic stress.
An increase in biomass in conditions of low water availability can be due to relatively improved growth efficiency or low water consumption. When selecting traits to improve crops, a decrease in water use, without changes in growth, would be particularly important in an irrigated agricultural system, in which the costs of water supply are high. An increase in growth without a corresponding increase in water use would apply to all agricultural systems. In many agricultural systems where the water supply is not limiting, a
Increased growth, even if it is at the expense of an increase in water use, also increases performance.
Agricultural biotechnologists also use measurements of other parameters that indicate the possible impact of a transgene on crop yields. For forage crops such as alfalfa, silage and hay, the biomass of the plant correlates with the total yield. However, for the grain crops other parameters were used to calculate the yield, such as plant size, measured by the total dry weight of the plant, aerial dry weight, fresh air weight, leaf area, stem volume, plant height, rosette diameter, leaf length, root length, root mass, number of stems and number of leaves. The size of the plant at an early stage of development usually correlates with the size of the plant at a later stage of development. A larger plant with a larger leaf area can usually absorb more light and carbon dioxide than a smaller plant and, therefore, will probably gain more weight during the same period. There is a strong genetic component that determines the size and speed of growth of the plant and, therefore, for various genotypes, it is possible that the size of the plant in a certain environmental condition correlates with the size in another. In this way, a standard environment is used that resembles the diverse dynamic environments that crops in the field face in different places and times.
The harvest index is relatively stable under various environmental conditions and, therefore, it is possible that there is a strong correlation between the size of the plant and the yield of the grain. The size of the plants and the yield of the grains are intrinsically linked because the majority of the biomass of the grain depends on the current or stored photosynthetic productivity of the leaves and the stem of the plant. As with tolerance to abiotic stress, measurements of plant size in early development, under standardized conditions in a growth chamber or in a greenhouse, are standard practices for measuring the potential performance advantages that presence provides. of a transgene.
Plants can not move to find sources of energy or to avoid predation or stress. As a result, the plants developed several networks and biochemical pathways to respond to the environment, which maintain the energy supply to the plant under development in various environmental conditions. One of the problems that plants face in these adverse conditions, such as drought, extreme temperatures and
exposure to heavy metals, is that some metabolic products are highly toxic.
In the case of oxidative stress, these toxins include the highly reactive oxygen species (ROS) of superoxide, peroxide, hydroxyl radicals and their organic derivatives. ROS are highly reactive to organic molecules, such as unsaturated lipids, nucleic acids and proteins. The ROS extract hydrogen from these organic molecules, which generates the formation of reduced oxygen (water or a reduced organic product) and a second organic ROS, which prolongs a chain reaction that generates the continuous destruction of cellular components until the ROS is kidnapped. ROS sequestration involves the formation of a non-reactive end product that is not a ROS species. It is known that several hydrogen donors that act as ROS scavengers work in plant cells, including tocopherol, ascorbate, glutin and thioredoxin. These various ROS scavengers share two common characteristics: the oxidized form is not reactive to other organic compounds and the oxidized form can be reduced by metabolic reactions in the cell to regenerate the reduced form of the sequestrant in a cyclic reaction that directly or indirectly reduces equivalents of NAD (P) H.
Oxidative stress occurs in plants under adverse environmental conditions when the production of ROS formed as a byproduct of metabolism exceeds the capacity of the sequestering system of the plant to dissipate ROS in stable end products. To cope with oxidative stress, the plant cell must contain adequate amounts of sequestrants or enzymes capable of inactivating ROS. In addition, the cell also requires an adequate supply of reducing equivalents in the form of NAD (P) H to regenerate the active form of the sequestrant. If none is adequate, the ROS titrant increases and the cell suffers oxidative damage to lipids, nucleic acids or proteins. In severe cases, this damage can cause cell death, necrosis and loss of productivity. '
Glutathione was detected in almost all cell compartments, such as cytosol, chloroplasts, endoplasmic reticulum, vacuoles and mitochondria. Glutathione is the main source of non-protein thiols in plant cells; The chemical reactivity of the thiol group makes glutathione participate in several biochemical functions. Glutathione is hydrosoluble, stable, and in addition to detoxifying ROS, it also provides protection against other types of stress, such as heavy metals, organic chemicals and pathogens. The soluble enzyme, "classical" glutathione peroxidase, converts the reduced monomeric glutathione (GSH) with H202 in its oxidized form, glutathione disulfide (GSSG) and H20. The cellular redox balance of a cell indicates the GSH / GSSG ratio and it was suggested that it participates in the perception and
ROS signage. The second form of glutathione peroxidase, phospholipid Hydroperoxide glutathione peroxidase (PHGPx), may be associated with the membrane. PHGPx is associated with various functions, such as cell signaling and differentiation, and may be linked to the thioredoxin pathway. PHGPx also reduces esterified lipid hydroperoxides in membranes. Therefore, it is associated with PHGPx with the repair of membrane lipid peroxidation.
Glutathione also participates in glutathionylation, which modifies proteins1 by protecting specific cysteine residues from irreversible oxidation, to regulate the activity of certain proteins in this way. The enzyme isocitrate lyase is deactivated by glutathionylation. Isocitrate lyase catalyzes the formation of succinate and isocitrate glyoxylate, part of the glyoxylate cycle, which converts two molecules of acetyl-CoA into a molecule of succinate.
Glutathione can also be degraded by the action of gamma-glutamyltranspeptidase, which catalyzes the transfer of the gamma-glutamyl portion of glutathione to an acceptor that can be an amino acid, a peptide or water. Based on the homology in animal GGTs, four genes were found in Arabidopsis: GGT1, GGT2, GGT3 and GGT4. GGT1 represents 80-99% of the activity, except in the 'seeds, where GGT2 represents 50% of the activity. The knockout of GGT2 and GGT4 do not show an apparent phenotype, but the knockout of GGT1 has premature senescence of the rosettes shortly after flowering. GGT3 knockouts show lower amount of siliques and lower seed yield.
Reduction-oxidation (redox) reactions occur when atoms undergo a change in their oxidative state, through an electron transfer reaction. Oxidation describes a gain of the oxidation state by hydrogen loss or oxygen gain. The reduction describes a loss of the oxidation state by hydrogen gain or oxygen loss. In biology, several important energy release or storage pathways include redox reactions. Cell respiration oxidizes glucose at C02 and reduces 02 to water. In photosynthesis, C02 is reduced to sugars and H2O is oxidized in 02 in Photosystem II. In Photosystem I, the electron gradient reduces the cofactor NAD + to NADH. A proton gradient is produced, generating the synthesis of ATP, as occurs in the respiratory chain, which extracts by bombéo H +; the H + that transports ATP synthase couples the absorption of H + to the synthesis of ATP. In non-photosynthetic organisms, such as £ coli, redox reactions can interchange
electrons and use hydrogen as an energy source to allow anaerobic growth, which requires the action of hydrogenases.
The redox state of a cell mainly reflects the ratio NAD + / NADH or NADP + / NADPH. This balance is reflected in the amount of metabolites, such as pyruvate and lactate. The growth of the plant requires the supply of carbon, ATP, NADH and NADPH. These requirements can be met by glycolysis and the pentose phosphate pathway, which provides an oxidative pathway to regenerate NADPH and a non-oxidative pathway to produce ribose and other hexose pentoses found in metabolism. Transaldolase is an enzyme in the non-oxidative pathway of pentose phosphate that catalyzes the reversible transfer of the three-carbon cetol unit from sedoheptulose-7-phosphate to glyceraldehyde-S-phosphate to form erythrose-4-phosphate and fructose-6-phosphate. Transaldolase, together with transketolase, provides a link between the glycolytic and pentose phosphate pathways.
The metabolism of galactose plays a role in cellular metabolism by providing glucose for the metabolism of fructose and mannose, sugar metabolism of nucleotides and glycolysis. The transformation of galactose into glucose-1-phosphate requires the action of three enzymes via the Leloir pathway: galactoquinasa, galactpsa-1-phosphate uridyliltransferase and UDP-galactose 4-epimerase. Galactokinase specifically phosphorylates galactose by the use of ATP to form galactose-1-phosphate in the first stage of the pathway.
Although some genes that are involved in the responses to stress, the use of water and / or biomass in plants were characterized, up to now attempts to develop transgenic crop plants with better yields have been limited, and these plants are not commercialized. Therefore, it is necessary to identify other genes that have the ability to increase the yield of crop plants.
SYNTHESIS OF THE INVENTION
The inventors of the present discovered the alterations of the expression of genes related to the sequestering system of ROS in plants can improve the performance of the plant. When directed as described herein, the polynucleotides and polypeptides indicated in Table 1 are capable of improving the yield of the transgenic plants.
I
i
Table 1
In one embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length galactokinase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter and an isolated polynucleotide encoding a polypeptide of
I
?
full-length transaldolase A; wherein the transgenic plant shows higher yield, as compared to a wild-type plant of the same variety that does not comprise the expression cassette. j
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter and an isolated polynucleotide encoding a full length accessory hydrogenase-2 polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter capable of enhancing gene expression in the leaves; an isolated polynucleotide encoding a transit peptide to mitochondria; and an isolated polynucleotide encoding a full length isocitrate Nasa polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full-length phospholipid hydroperoxide polypeptide glutathione peroxidase; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter and an isolated polynucleotide encoding a full-length gamma-glutamyltranspeptidase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide that encodes a transit peptide to mitochondria; and an isolated polynucleotide encoding a polypeptide of subunit B 'of
ATP full-length synthase; where the transgenic plant shows higher yield, compared to a wild type plant of the same variety that does not
includes the expression cassette. !
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length 0-22 sterol desaturase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
In another embodiment, the invention provides a seed produced by the transgenic plant of the invention, wherein the seed is genetically pure line for a transgene comprising the expression vectors described above. The plants derived from the seed of the invention show greater tolerance to environmental stress and / or higher plant growth and / or higher yield, under normal and / or stress conditions, compared to a wild-type variety of the plant.
In yet another aspect, the invention relates to products produced by or from the transgenic plants of the invention, the plant parts, or their seeds; such as food products for humans, food products for animals, food supplements for humans, food supplements for animals, fibers, cosmetics or pharmaceutical products.
The invention also provides certain isolated polynucleotides identified in Table 1 and certain isolated polypeptides identified in Table 1. The invention is also expressed in a recombinant vector comprising an isolated polynucleotide of the invention.
In yet another embodiment, the invention relates to a method for producing the aforementioned transgenic plant, wherein the method comprises transforming a plant cell with an expression vector comprising an isolated polynucleotide of the invention and generating a transgenic plant. of the plant cell expressing the polypeptide encoded by the polynucleotide. Expression of the polypeptide in plants results in greater tolerance to environmental stress and / or increased growth and / or yield, under normal and / or stress conditions, compared to a wild-type variety of the plant.
In yet another embodiment, the invention provides a method for increasing the
I
I
tolerance of a plant to environmental stress and / or growth and / or yield. The method comprises the steps of transforming a plant cell with an expression cassette comprising an isolated polynucleotide of the invention and generating a transgenic plant of the plant cell, wherein the transgenic plant comprises the polynucleotide.
I BRIEF DESCRIPTION OF THE DRAWINGS
I
Figure 1 shows an alignment of amino acid sequences of the galactokinase called b0757 (SEQ ID NO: 2), GM59594085 (SEQ ID NO: 4), GM59708137 (SEQ ID NO: 6) and ZMBFb0152K10 (SEQ ID NO: 8) . The alignment was generated with Align X of Vector NTI. 1
Figure 2 shows an alignment of amino acid sequences of the transaldolase A proteins designated b2464 (SEQ ID NO: 10), BN43182918 (SEQ ID NO: 12) and GM48926546 (SEQ ID NO: 14). The alignment was generated with Align X of Vector NTI.
Figure 3 shows an alignment of amino acid sequences of the phospholipid hydroperoxide glutathione peroxidases designated YIR037W. { SEQ ID NO: 20), BN4226 838 (SEQ ID NO: 22), BN43722096 (SEQ ID NO: 24), BN51407729 (SEQ ID NO: 26), GM50585691 (SEQ ID NO: 28), GMsa56c07 (SEQ ID NO: 30), GMsp82f11 (SEQ ID NO: 32), GMss66f03 (SEQ ID NO: 34), HA03MC1446 (SEQ ID NO: 36), HV03MC9784 (SEQ ID NO: 38), OS34914218 (SEQ ID NO: 40), ZM61990487 ( SEQ ID NO: 42) and ZM68466470.r01 (SEQ ID NO: 44). The alignment was generated with Align X of Vector NTI. 1
Figure 4 shows an alignment of amino acid sequences of the ATP synthase B 'subunit proteins designated SLL1323 (SEQ ID NO: 48) and Gmsb38b04 (SEQ ID NO: 50). The alignment was generated with Align X of Vector NTI.
Figure 5 shows an alignment of amino acid sequences of the C-22 esteral desaturases designated YMR015C (SEQ ID NO: 52) and GMso65h07 (SEQ ID NO: 54). The alignment was generated with Align X of Vector NTI.
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
In the present specification, reference is made to various publications. The descriptions of all of these publications and the references cited in said publications are hereby incorporated by reference in their entirety, in order to more fully describe the state of the art to which the present invention pertains. The terminology used herein is for the purpose of describing only specific embodiments
i
I
and does not intend to limit them. As used herein, "an" or "an" can mean one or more, depending on the context in which it is used. Accordingly, for example, the reference to "one cell" can mean that at least one cell is used.
In one embodiment, the invention provides a transgenic plant that overexpresses an isolated polynucleotide identified in Table 1 in the compartment.
subcellular and tissue indicated herein. The transgenic plant of the invention shows better yield, as compared to a wild type variety of the plant. As used herein, the term "best yield" means an improvement in the yield of any measured plant product, such as grain, fruit or fiber. According to the invention, changes in different phenotypic traits can improve performance. For example, and without limitation, the parameters, such as floral organ development, root start, root biomass, seed quantity, seed weight, harvest index, tolerance to abiotic environmental stress, leaf formation, Phototropism, apical dominance and fruit development are adequate measurements of the best performance. According to the invention, an increase in performance is better performance. For example, the performance improvement may comprise an increase of 0.1%, 0.5%, 1%, 3%, 5%, 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or greater in any parameter measured. For example, according to the invention, an increase in the yield per bu / acfe of soy or corn derived from a culture comprising plants that are transgenic for the nucleotides and polypeptides of Table 1, compared to the yield pqr bu / acre of soybeans or corn not treated under the same conditions, better yield according to the invention.
I
As defined herein, a "transgenic plant" is a plant that was altered by recombinant DNA technology to contain an isolated nucleic acid that would not otherwise be present in the plant. As used in the present, the term "plant" includes whole plants, plant cells and parts of plants. Plant parts include, without limitation, stems, roots, ovules, stamens, leaves, embryos, meristematic regions, callus tissues, gametophytes, sporophytes, pollen, microspores and the like. The transgenic plant of the invention may be sterile male or fertile male, and may also include transgenes other than those comprising the isolated polynucleotides described herein. i
As used herein, the term "variety" refers to a group of plants of a species that share constant characteristics that differentiate them from the typical form
I
and other possible varieties of that species. While it has at least one distinctive feature, a variety is also characterized by some variation among individuals of the variety, which is based primarily on Mendelian segregation of traits among the progeny of successive generations. A variety is considered "genetically pure line" for a particular trait, if it is genetically homozygous for that trait, insofar as, when the genetically pure line variety self-pollinates, a considerable amount of feature-independent segregation is not observed among the progeny In the present invention, the trait arises from the transgenic expression of one or more isolated nucleotides introduced into a plant variety. As also used herein, the term "wild-type variety" refers to a group of plants that are analyzed for comparative purposes as a control plant, wherein the variety of wild-type plant is identical to the transgenic plant (plant transformed with an isolated polynucleotide according to the invention) with the exception that the wild-type plant variety was not transformed with an isolated polynucleotide of the invention. As used herein, the term "wild type" refers to a plant cell, seed, plant component, plant tissue, plant organ or whole plant that was not genetically modified with an isolated polynucleotide according to the invention. invention.
As used herein, the term "control plant" refers to a plant cell, an explant, seed, plant component, plant tissue, organ! of plant or whole plant used to compare with a transgenic or genetically modified plant, in order to identify an improved phenotype or a desirable trait in the transgenic or genetically modified plant. In some cases, a "control plant" can be a transgenic plant line comprising a marker gene or empty vector, but not containing the recombinant polynucleotide of interest that is present in the transgenic or genetically modified plant being evaluated. A control plant can be a plant of the same line or variety as the transgenic or genetically modified plant that is evaluated, or can be of another line or variety, such as a plant known to have a specific known phenotype, characteristic or genotype. . A suitable control plant would include a non-transgenic or non-genetically modified plant of the parental line used to generate a transgenic plant hereof.
As defined herein, the terms "nucleic acid" and "polynucleotide" are indistinct and refer to RNA or DNA that is linear or branched, mono- or double-stranded, or a hybrid thereof. The term also encompasses RNA / DNA hybrids. An acid molecule
I
I
"Isolated" nucleic acid is substantially separated from other nucleic acid molecules that are present in the natural source of the nucleic acid (ie, sequences encoding other polypeptides). For example, a cloned nucleic acid is considered isolated. A nucleic acid is also considered isolated if it was altered by human intervention, or placed in a locus or location that is not its natural site, or if it is introduced into a cell by transformation. Also, an isolated nucleic acid molecule, such as a cDNA molecule, may be free from part of the other cellular material with which it is naturally associated, or culture medium when produced by recombinant techniques,? chemical precursors or other chemical products when chemically synthesized. While it may optionally include untranslated sequences located at the 3 'and 5' ends of the coding region of a gene, it may be preferable to remove flanking sequences.
naturally the coding region in its natural replicon.
As used herein, the term "environmental stress" refers to sub-optimal conditions associated with stress of salinity, drought, nitrogen, temperature, metal, chemicals, pathogens or oxidative stress, or any combination of these. As used herein, the term "drought" refers to an environmental condition wherein the
I
amount of water available to support the growth or development of the plant is suboptimal. As used herein, the term "fresh weight" refers to everything found in the plant, including water. As used herein, the term "dry constipation" refers to everything found in the plant other than water and includes, for example, carbohydrates, proteins, oils and mineral nutrients.
According to the invention, any plant species can be transformed to create a transgenic plant. The transgenic plant of the invention can be a dicotyledonous plant or a monocotyledonous plant. For example, and without limitation, the transgenic plants of the invention can derive from any of the following families of dicotyledonous plants: Leguminosae, which includes plants such as peas, alfalfa and soy; Umbelliferae, which includes plants such as carrots and celery; Solanaceae, which includes plants such as tomato, potato, eggplant, tobacco and pepper; Cruciferae, in particular, the genus Brassica, which includes plants such as oilseed rape, beet, cabbage, cauliflower and broccoli); and A. thaliana; Compositae, which includes plants such as Malvaceae lettuce, which includes cotton; Fabaceae, which includes plants such as peanuts and the like. The transgenic plants of the invention can be derived from monocotyledonous plants, such as, for example, wheat, barley, sorghum, millet, rye, triticale, corn, rice, oats and sugarcane.
The transgenic plants of the invention also include trees, such as apple tree, pear, quince, plum, cherry, peach, nectarine, damask, papaya, mango and other woody species, which include coniferous and deciduous trees, such as poplar, pine, sequoia, cedar, oak and similar. Especially preferred are Arabidopsis thaliana, Nicotiana tabacum, rice, oilseed rape, cañola, soybean, corn, cotton and wheat.
In one embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a peptide or transit to chloroplast; and an isolated polynucleotide encoding a full length galactokinase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, transgenic Arabidopsis plants containing the b0757 gene from E. coli (SEQ ID NO: 1) that targets the chloroplast, show higher yield, compared to the Arabidopsis control plants . The b0757 gene encodes galactokinase and is characterized, in part, by the presence of the characteristic sequences GHMP_kinases_C (Pfam: PF08544) and GHMP_kinases_N (PF00288). These characteristic sequences are exemplified in the galactokinase proteins indicated in Figure 1.
The transgenic plant of this embodiment may comprise any polynucleotide that encodes a galactokinase polypeptide. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full length polypeptide having galactokinase activity, eg where the polypeptide comprises at least one selected characteristic sequence of GHMP_kinases_C and GHMP_kinases_N, where the characteristic sequence GHMP_kinases_C is selected of the group consisting of amino acids 278 to 362 of SEQ ID NO: 2; amino acids 378 to 426 of SEQ ID NO: 4; amino acids 326 to 404 of SEQ ID NO: 6; and amino acids 391 to 473 of SEQ ID NO: 8; and wherein the characteristic sequence GHMP_kinases_N is selected from the group consisting of amino acids 1 | 14 to 182 of SEQ ID NO: 2; amino acids 152 to 219 of SEQ ID NO: 4; amino acids 138 to 205 of SEQ ID NO: 6; and amino acids 159 to 226 of SEQ ID NO: 8. Preferably, the polypeptide comprises a characteristic sequence GHMP_kinases_C and a characteristic sequence GHMP_kinases_N. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a galactokinase polypeptide that
i
has a sequence selected from the group consisting of amino acids 1 to 382 of SEQ ID NO: 2; amino acids 1 to 460 of SEQ ID NO: 4; amino acids 1 to 431 of SEQ ID NO: 6; and amino acids 1 to 504 of SEQ ID NO: 8. I
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated F oligonucleotide encoding a promoter; and an isolated polynucleotide encoding a full-length transaidolase A polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, transgenic Arabidopsis plants containing the b2464 gene from E. coli (SEQ ID NO: 9), which encodes a trans-a-lase A polypeptide, and the transgenic plants of this embodiment show greater performance, compared to the Arabidopsis control plants. The transaidolase A polypeptides are characterized, in part, by the presence of a characteristic sequence of Transaidolase (PF00923). These characteristic sequences are exemplified in the transaidolase A proteins indicated in Figure 2.
The transgenic plant of this embodiment may comprise any polynucleotide that encodes a transaidolase A protein. Preferably, the transgenic plant of this embodiment comprises a polynucleotide that encodes a full-length polypeptide having transaidolase A activity, wherein the polypeptide it comprises a characteristic sequence of transaidolase selected from the group consisting of amino acids 12 to 312 of SEQ ID NO: 10; amino acids 1 to 275 of SEQ ID NO: 12; and amino acids 1 to 277 of SEQ ID NO. 14. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a transaidolase A polypeptide having a sequence selected from the group consisting of amino acids 1 to 316 of SEQ ID NO: 10; amino acids 1 to 284 of SEQ ID NO: 12; and amino acids 1 to 283 of SEQ ID NO: 14.
In another embodiment, the invention provides a transgenic plant transformed i
with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; and an isolated polynucleotide encoding a full-length accessory hydrogenase-2 polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, transgenic Arabidopsis plants containing the E. coli b2990 gene (SEQ ID NO: 15)
showed higher yield, compared to Arabidopsis control plants. The b2990 gene encodes an accessory protein of hydrogenase-2. In E. coli under anaerobic conditions, this protein is an accompanying type protein necessary for the generation of active hydrogenase-2, which is an absorption hydrogenase [NiFe] which, together with hydrogenase 1, couples the oxidation of H2 to the fumarate reduction The accessory proteins of hydrogenase-2 are characterized, in part, by the presence of a characteristic sequence HupF_HypC (PF01455).
The transgenic plant of this embodiment may comprise any polynucleotide that encodes an accessory protein of hydrogenase-2. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full-length polypeptide having hydrogenase assembly companion activity, wherein the polypeptide comprises a characteristic sequence | HupF_HypC comprising amino acids 1 to 79 of SEQ ID NO: 16. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding an accessory protein of hydrogenase-2 having a sequence comprising amino acids 1 to 82 of SEQ ID NO: 16.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter capable of enhancing gene expression in the leaves; an isolated polynucleotide that encodes a transit peptide to mitochondria; and an isolated polynucleotide encoding a full length isocitrate Nasa polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, the transgenic Arabidopsis plants containing the gene S. cerevisiae YER065C (SEQ ID NO: 17) coding for isocitrate lyase and targeting the mitochondria, show higher yield, as compared to plants of control of Arabidopsis. The isocitrate lyases are characterized, in part, by the presence of a characteristic ICL sequence (PF00463).
The transgenic plant of this embodiment may comprise any polynucleotide that encodes an isocitrate lyase. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full length polypeptide having isocitrate lyase activity, wherein the polypeptide comprises a characteristic ICL sequence comprising amino acids 22 to 550 of; SEQ ID NO:
18. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a Nasa isocitrate having a sequence comprising amino acids 1 to 557 of SEQ ID NO: 18.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length phospholipid hydroperoxide polypeptide glutathione peroxidase; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, the transgenic Arabidopsis plants containing the gene S. cerevisiae YIR037W (SEQ ID NO: 19) that targets the chloroplast, show higher yield, compared to the Arabidopsis control plants. The YIR037W gene encodes a protein phospholipid hydroperoxide glutathione peroxidase, which functions as a sensor of intracellular hyperoxide levels and a transducer of the redox signal of the transcription factor Yap1, which regulates the levels of hyperoxide in S. cerevisiae. The phospholipid hydroperoxide glutathione peroxidases are characterized, in part, by the presence of a characteristic GSHPx sequence (PF00255) representative of the glutathione peroxidase gene family. These characteristic sequences are exemplified in the phospholipid hydroperoxide glutathione peroxidases indicated in Figure 3.!
The transgenic plant of this embodiment may comprise any polynucleotide encoding a phospholipid hydroperoxide glutathione peroxidase. Preferably, the transgenic plant of this embodiment comprises a polynucleotide that encodes a full length polypeptide having phospholipid hydroperoxide glutathione peroxidase activity, wherein the polypeptide comprises a GSHPx characteristic sequence selected from the group consisting of amino acids 4 to 111 of SEQ ID NO: 20; amino acids 10 to 118 of SEQ ID NO: 22; amino acids 37 to 145 of SEQ ID NO: 24; amino acids 9 to 117 of SEQ ID NO: 26; amino acids 9 to 117 of SEQ ID NO: 28; amino acids 9 to 117 of SEQ ID NO: 30; amino acids 12 to 120 of SEQ ID NO: 32; amino acids 12 to 120 of SEQ ID NO: 34; amino acids 11 to 119 of SEQ! ID NO: 36; amino acids 12 to 120 of SEQ ID NO: 38; amino acids 9 to 117 of SEQ ID NO: 40; amino acids 12 to 120 of SEQ ID NO: 42; and amino acids 24 to 132 of SEQ ID NO: 44. Most preferably, the transgenic plant of this embodiment comprises a
polynucleotide encoding a phospholipid hydroperoxide glutathione peroxidase having a sequence selected from the group consisting of amino acids 1 to 163 of SEQ ID NO: 20; amino acids 1 to 169 of SEQ ID NO: 22; amino acids 1 to 201 of SEQ ID NO: 24; amino acids 1 to 169 of SEQ ID NO: 26; amino acids 1 to 166 of SEQ j ID NO: 28; amino acids 1 to 166 of SEQ ID NO: 30; amino acids 1 to 170 of SEQ ID NO: 32; amino acids 1 to 170 of SEQ ID NO: 34; amino acids 1 to 185 of SEQ j ID NO: 36; amino acids 1 to 176 of SEQ ID NO: 38; amino acids 1 to 166 of SEQ ID NO: 40; amino acids 1 to 170 of SEQ ID NO: 42; and amino acids 1 to 182 of SEQ ID NO: < Four.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; and an isolated polynucleotide encoding a full-length gamma-glutamyltranspeptidase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild-type plant of the same variety that does not comprise the expression cassette. Optionally, the expression cassette also comprises an isolated polynucleotide that encodes a chloroplast transit peptide, in operative association with the isolated polynucleotide encoding a promoter and the isolated polynucleotide encoding a full length gamma-glutamyltranspeptidase polypeptide. As indicated in Example 2 below, transgenic Arabidopsis plants containing the slr1269 gene from Synechocystis sp. (SEQ ID NO: 45) which encodes a gamma-glutamyltranspeptidase polypeptide, show higher yield, compared to the Arabidopsis control plants. The gamma-glutamyltranspeptidase are characterized, in part, by the presence of a characteristic sequence IG_glu_transpept (PF01019).
The transgenic plant of this embodiment may comprise any polynucleotide encoding a gamma-glutamyltranspeptidase. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full-length polypeptide having gamma-glutamyltranspeptidase activity, wherein the polypeptide comprises a characteristic G_glu_transpept sequence comprising amino acids 21 to 51 1 of SEQ ID NO: 46. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a gamma-glutamyltranspeptidase having a sequence comprising amino acids 1 to 518 of SEQ ID NO: 46.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, a pplinucleotide
I
isolated that encodes a promoter; an isolated polynucleotide that encodes a transit peptide to mitochondria; and an isolated polynucleotide encoding a polypeptide of the B 'subunit of full-length ATP synthase; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. As indicated in Example 2 below, transgenic Arabidopsis plants containing the SLL1323 gene from Synephocystis sp. (SEQ ID NO: 47) that targets the mitochondria, show higher yield, compared to the Arabidopsis control plants. The SLL1323 gene encodes a protein of the B 'subunit of ATP synthase. Subunits B and B 'are of the FO complex in F-ATPases that are found in chloroplasts and bacterial plasma membranes and are part of the peripheral peduncle that binds F1 and FO complexes together. The proteins of the B 'subunit of ATP synthase are characterized, in part, by the presence of a characteristic sequence ATP-synt_B (PF00430) representative of the gene family B / B' CF (0) of ATP synthase. These characteristic sequences are exemplified in the proteins of the B 'subunit of ATP synthase indicated in Figure 4.
The transgenic plant of this embodiment may comprise any polynucleotide that encodes a protein of the B 'subunit of ATP synthase. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full-length polypeptide having activity of the B 'subunit of ATP synthase, wherein the polypeptide comprises a characteristic sequence ATP-synt_B selected from the group consisting of amino acids 7 to 138 of SEQ ID NO: 48 and amino acids 82 to 213 of SEQ ID NO: 50. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide 'which encodes a protein of the B' subunit of ATP synthase. having a sequence comprising amino acids 1 to 143 of SEQ ID NO: 48 and amino acids 1 to 215 of SEQ ID NO: 50.
In another embodiment, the invention provides a transgenic plant transformed with an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full-length C-22 sterol desaturase polypeptide; wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette. The YMR015C gene (SEQ ID NO: 51) encodes a C-22 sterol desaturase, which is a cytochrome P450 enzyme (ERG5) which, in yeast, catalyzes the
I
i
í
formation of the double ligature C-22 (23) in the sterol side chain in the ergosterol biosynthesis. The enzymes of C-22 sterol desaturase are characterized, in part, by the presence of a K-helix motif (xExxR), a consensus sequence PER ^ (PxRx) and a FGRCG motif surrounding the protoporphyrin IX ligand hemocysteine near the terminal C. Those conserved motifs are exemplified in the C-22 sterol desaturase polypeptides indicated in Figure 5. i
The transgenic plant of this embodiment may comprise any polynucleotide that encodes a C-22 sterol desaturase. Preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a full-length polypeptide having C-22 sterol desaturase activity, wherein the polypeptide comprises a domain comprising a K-helix motif, a PERF motif and a motif. FGRCG, wherein the helix motif K has a sequence selected from the group consisting of amino acids 395 to 398 of SEQ ID NO: 52 and amino acids 365 to 368 of SEQ ID NO: 54; the PERF motif has a sequence selected from the group consisting of amino acids 450 to 453 of SEQ ID NO: 52 and amino acids 418 to 421 of SEQ ID NO: 54; and the FGRCG motif has a sequence selected from the group consisting of the amino acids 469 to 478 of SEQ ID NO: 52 and amino acids 438 to 447 of SEQ ID NO: 54. Most preferably, the polynucleotide encodes a full-length polypeptide that has activity
í
of C-22 sterol desaturase, wherein the polypeptide comprises a domain selected from the group consisting of amino acids 61 to 529 of SEQ ID NO: 52 and amino acids 27 to 498 of SEQ ID NO: 54. Most preferably, the transgenic plant of this embodiment comprises a polynucleotide encoding a C-22 sterol desaturase comprising amino acids 1 to 538 of SEQ ID NO: 52 and amino acids 1 to 513 of SEQ ID NO: 54.
The invention also provides a seed that is genetically pure in line for the expression cassettes (also referred to herein as "transgenes") described herein, wherein the transgenic plants grown from said seed show higher yield, as compared to a variety wild type of the plant. The invention also provides a product produced by or from the transgenic plants expressing the polynucleotide, the parts of the plant or their seeds. The product can be obtained by various methods known in the art. As used in the present, the term "product" includes, without limitation, food products for humans, food products for animals, food supplements for humans, supplements
food for animals, fibers, cosmetics or pharmaceutical products. Food products for humans are considered compositions for nutrition or to supplement nutrition. Foodstuffs for animals and food supplements for animals, in particular, are considered foodstuffs. The invention also provides an agricultural product produced by any of the transgenic plants, parts of plants and the seeds of plants. Agricultural products include, without limitation, plant extracts, proteins, amino acids, carbohydrates, fats, oils, polymers, vitamins and the like. |
The invention also provides an isolated polynucleotide having a sequence selected from the group consisting of SEQ ID NO: 3; SEQ ID NO: 5; SEQ ID NO: 7; SEQ ID NO: 11; SEQ ID NO: 13; SEQ ID NO: 21; SEQ ID NO: 23; SEQ ID NO: 25; SEQ ID NO: 27; SEQ ID NO: 29; SEQ ID NO: 31; SEQ ID NO: 33; SEQ ID NO: 35; SEQ ID NO: 37; SEQ ID NO: 39; SEQ ID NO: 41; SEQ ID NO: 43; SEQ ID NO: 49; and SEQ ID NO: 53. The isolated polynucleotide of the invention also includes an isolated polynucleotide that encodes a polypeptide having an amino acid sequence selected from the group. consisting of SEQ ID NO: 4; SEQ ID NO: 6; SEQ ID NO: 8; SEQ ID NO: 12; SEQ ID NQ: 14; SEQ ID NO: 22; SEQ ID NO: 24; SEQ ID NO: 26; SEQ ID NO: 28; SEQ ID NO: 30; SEQ ID NO: 32; SEQ ID NO: 34; SEQ ID NO: 36; SEQ ID NO: 38; SEQ ID NO: 40; SEQ ID NQ: 42; SEQ ID
NO: 44; SEQ ID NO: 50; and SEQ ID NO: 54. A polynucleotide of the invention can be isolated with standard molecular biology techniques and the sequence information provided herein, for example, with an automated DNA synthesizer. ,
The isolated polynucleotides of the invention include homologs of the polynucleotides of Table 1. In the present, "homologs" are defined as two nucleic acids or polypeptides having similar or substantially identical nucleotide or amino acid sequences, respectively. Homologs include allelic variants, analogs and orthologs, as defined below. As used herein, the term "analogs" refers to two nucleic acids that have the same or similar function, but evolved separately in unrelated organisms. As used herein, the term "orthologs" refers to two nucleic acids from different species, but which evolved from an ancestral gene in common by speciation! The term "homologous" also comprises nucleic acid molecules that differ from one of the nucleotide sequences indicated in Table 1 due to the degeneracy of the genetic code and, therefore, encode the same polypeptide.
To determine the percentage of sequence identity of two sequences of
!
amino acids (for example, one of the polypeptide sequences of Table 1 and an
homologous to these), the sequences are aligned for purposes of optimal comparison (for example, gaps in the sequence of a polypeptide can be introduced for optimal alignment with the other polypeptide or nucleic acid). The amino acid residues are then compared at the corresponding amino acid positions. When a position in a sequence is occupied by the same amino acid residue as the corresponding position in the other sequence, then the molecules are identical in that position. The same type of comparison can be made between two nucleic acid sequences.
Preferably, homologs, analogs and orthologs of amino acids isolated from the polypeptides of the present invention are at least about 50-60%, preferably at least about 60-70% and, more preferably, at least about 70- 75%, 75-80%, 80-85%, 85-90% or 90-95% and, most preferably, at least about 96%, 97%, 98%, 99% or more identical to a sequence of complete amino acid identified in Table 1. In another preferred embodiment, an isolated nucleic acid homolog of the invention comprises a nucleotide sequence that is at least about 40-60%, preferably at least about 60-70% , more preferably, at least about 70-75%, 75-80%, 80-85%, 85-90% or 90-95% and even more preferably, at least about 95%, 96%, 97 %, 98%, 99% or more identical to a nucleotide sequence indicated in Table 1.
For the purposes of the invention, the percentage of sequence identity between two nucleic acid sequences or polypeptides is determined by the use of Align 2.0 (yers and Miller, CABIOS (1989) 4: 11-17) with the parameters established in the default configurations or the Vector NTI 9.0 (PC) software package (Invitrogen, 1600 Faraday Ave., Carlsbad, CA92008). For the identity percentage calculated with Vector NTI, a gap opening penalty of 15 and a gap extension penalty of 6.66 is used to determine the percent identity of two nucleic acids. A breach penalty of 10 and a gap extension penalty of 0.1 are used to determine the identity percentage of two polypeptides. All other parameters are set as default settings. For the purposes of a multiple alignment (Clustal W algorithm), the breach gap penalty is 10 and the gap extension penalty is 0.05 with matrix blosum62. It must be taken into account that for the purpose of determining the sequence identity when a sequence is compared
of DNA with an RNA sequence, a thymidine nucleotide is equivalent to a uracil nucleotide.
The nucleic acid molecules corresponding to homologs, analogs and orthologs of the polypeptides listed in Table 1 can be isolated on the basis of their identity with said polypeptides, by using polynucleotides that encode the respective polypeptides or primers based thereon, as hybridization probes according to standard hybridization techniques under stringent hybridization conditions. As used herein with respect to DNA hybridization in a DNA blot, the term "stringent conditions" refers to hybridization overnight at 60 ° C in Denhart 10X solution, 6X SSC, 0.5 % of SDS and 100 μg / ml denatured salmon sperm DNA.The blots are washed sequentially at 62 ° C for 30 minutes each time
3X SSC / 0.1% SDS, followed by 1X SSC / 0.1% SDS and, finally, 0.1X SSC / 0.1% SDS. As also used herein, in a preferred embodiment, the phrase "stringent conditions" refers to hybridization in a 6X SSC solution at 65 ° C. In another embodiment, "highly stringent conditions" refers to hybridization overnight at 65 ° C in Denhart 10X solution, 6X SSC, 0.5% SDS and 100 μg / ml denatured salmon sperm DNA. . The blots are washed sequentially at 65 ^ for 30 minutes each time in 3X SSC / 0.1% SDS, followed by 1X SSC / 0.1% SDS and finally 0.1X SSC / 0.1% SDS . Methods for performing nucleic acid hybridizations are known in the art.
The isolated polynucleotides used in the invention can be optimized, that is, they can be modified by genetic engineering, to increase their expression in a given plant or animal.To provide optimized plant nucleic acids, the DNA sequence of the invention can be modified. gene so that it: 1) comprises preferred codons for highly expressed plant genes, 2) comprises an A + T content in a nucleotide base composition to which it is substantially in plants, 3) forms a plant initiation sequence; 4) eliminate sequences that cause destabilization, inadequate polyadenylation, RNA degradation and termination, or form secondary structure hairpins or RNA splicing sites, or 5) eliminate antisense open reading frames Increased expression of nucleic acids in plants It can be achieved by using the distribution frequency of codon usage in plants in general or in a particular plant. methods to optimize the expression of nucleic acids in
plants can be found in EPA 0359472; EPA 0385962; PCT application No. WO 91/16432;
expression cassette selected from the group consisting of: a) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length galactosidase polypeptide; b) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; and an isolated polynucleotide encoding a full length transaldolase A polypeptide; c) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; and an isolated polynucleotide encoding a full-length accessory hydrogenase-2 polypeptide; d) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide that encodes a transit peptide to mitochondria; and an isolated polynucleotide encoding a full length isocitrate Nasa polypeptide; e) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length phospholipid hydroperoxide polypeptide glutathione peroxidase; f) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; and an isolated polynucleotide encoding a full-length gamma-glutamyltranspeptidase polypeptide; g) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide that encodes a transit peptide to mitochondria; and an isolated polynucleotide encoding a polypeptide of the B 'subunit of full-length ATP synthase; and h) an expression cassette comprising, in operative association, an isolated polynucleotide encoding a promoter; an isolated polynucleotide encoding a chloroplast transit peptide; and an isolated polynucleotide encoding a full length C-22 polypeptide esteral desaturase.;
In another embodiment, the recombinant expression vector of the invention comprises an isolated polynucleotide having a sequence selected from the group consisting of SEQ ID NO: 3; SEQ ID NO: 5; SEQ ID NO: 7; SEQ ID NO: 11; SEQ ID NO: 13;
SEQ ID NO: 21; SEQ ID NO: 23; SEQ ID NO: 25; SEQ ID NO: 27; SEQ ID NO: 29; SEQ ID NO: 31; SEQ ID NO: 33; SEQ ID NO: 35; SEQ ID NO: 37; SEQ ID NO: 39; SEQ ID NO: 41; SEQ ID NO: 43; SEQ ID NO: 49; and SEQ ID NO: 53. Likewise, the recombinant expression vector of the invention comprises an isolated polynucleotide encoding a polypeptide having an amino acid sequence selected from the group consisting of SEQ ID NO: 4; SEQ ID NO: 6; SEQ ID NO: 8; SEQ ID NO: 12; SEQ ID NO: 14; SEQ ID NO: 22; SEQ ID NO: 24; SEQ ID NO: 26; SEQ ID NO: 28; SEQ ID NO: 30; SEQ ID NO: 32; SEQ ID NO: 34; SEQ ID NO: 36; SEQ ID NO: 38; SEQ ID NO: 40; SEQ ID NO: 42; SEQ ID NO: 44; SEQ ID NO: 50; and SEQ ID NO: 54.
The recombinant expression vector of the invention also includes one or more regulatory sequences, selected on the basis of the host cells to be used for expression, which are in operative association with the isolated polynucleotide to be expressed. As used herein with respect to the recombinant expression vector, "in operative association" or "operatively linked" means that the polynucleotide of interest is ligated to the regulatory sequences in a manner that allows expression of the polynucleotide when the vector is introduced. in the host cell (e.g., in a plant or bacterial host cell). The term "regulatory sequence" is intended to include promoters, enhancers and other expression control elements (e.g., polyadenylation signals).
As indicated above, certain embodiments of the invention use promoters that are capable of enhancing gene expression in the leaves. In some embodiments, the promoter is a leaf specific promoter. Any specific leaf promoter can be used in these embodiments of the invention. Many such promoters are known, for example, the USP promoter from Vicia faba (Baeumlein et al (1991) Mol.Gen. Genet 225, 459-67), promoters of light-inducible genes, such as ribulose-1. , 5-bisphosphate carboxylase (rbcS promoters), promoters of genes encoding chlorophyll a / b binding proteins (Cab), Rubisco activase, chloroplast glyceraldehyde 3-phosphate dehydrogenase B subunit of A. thaliana, (Kwon et al. (1994) Plant Physiol.
i
105,357-67) and other leaf-specific promoters, such as those identified in German, I. (2001) Isolation and characterization of leaf-specific promoters from alfalfa (Medicago sativa), Masters thesis, New Mexico State University, Los Cruces , Nl) l.
In other embodiments, a specific or root-specific promoter is used. For example, the Superpromotor provides a high level of expression both in the roots
as in the outbreaks (Ni et al. (1995) Plant J. 7: 661-676). Other root specific promoters include, without limitation, the TobRB7 promoter (Yamamoto et al. (1991) Plant Cell 3, 371-382), the roID promoter (Leach et al. (1991) Plant Science 79, 69-76); the domain of CaMV 35S (Benfey et al (1989) Science 244, 174-181) and the like.
In other embodiments, a constitutive promoter is used. Constitutive promoters are active under most conditions. Examples of suitable constitutive promoters for use in these embodiments include the ubiquitin promoter of parsley, described in WO2003 / 102198; the CaMV 19S and 35S promoters, the sX CaMV 35S promoter, the Sep1 promoter, the rice actin promoter, the Arabidopsis actin promoter, the maize ubiquitin promoter, pEmu, the 35S promoter of the fig mosaic virus, the Smas promoter , the superpromotor (U.S. Patent No. 5,955,646), the GRP1-8 promoter, the cinnamyl alcohol dehydrogenase promoter (U.S. Patent No. 5,683,439), Agrobacterium T-DNA promoters, such as mannopin synthase, nopaline synthase and octopine synthase, the promoter of the small subunit of ribulose bisphosphate carboxylase (ssuRUBISCO) and the like. i
According to the invention, a chloroplast transit sequence refers to a nucleotide sequence that encodes a chloroplast transit peptide. Examples of a chloroplast transit peptide include the group consisting of transit peptide to chlorophyll a / b binding protein, transit peptide to the small subunit of ribulose bisphosphate carboxylase, transit peptide to EPSPS and transit peptide to dihydrodipocholic acid synthase. As defined herein, a mitochondria transit sequence refers to a nucleotide sequence that encodes a mitochondrial presequence and directs the protein to the mitochondria. Examples of pres- sures of mitochondria include groups consisting of ATPase subunits, ATP synthase subunits, Rieske-FeS protein, Hsp60, malate dehydrogenase, citrate synthase, aconitase, isocitrate dehydrogenase, pyruvate dehydrogenase, malic enzyme, glycine decarboxylase, serine hydroxymethyl transferase and superoxide dismutase.
These transit peptides are known in the art. See, for example, Von Heijne et al. (1991) Plant Mol. Biol. Rep. 9: 104-126; Clark et al. (1989) J. Biol. Cherri. 264: 17544-17550; Della-Cioppa et al. (1987) Plant Physiol. 84: 965-968; Romer et al. (1993) Biochem. Biophys. Res. Commun. 196: 1414-1421; and Shah et al. (1986) Science 233: 478-481. Chloroplast targeting sequences are known in the art and include the small subunit of ribulose 1, 5-bisphosphate carboxylase (Rubisco) of chloroplast (de Castro
i
Silva Filho et al. (1996) Plant Mol. Biol. 30: 769-780; Schnell et al. (1991) J. Biol. Chem. 266 (5): 3335-3342); 5- (enolpiruvil) shiquimato-3-phosphate synthase (EPSPS) (Archer et al (1990) J. Bioenerg, Biomemb.22 (6): 789-810); tryptophan synthase (Zhao et al (1995) J. Biol. Chem. 270 (11): 6081-6087); plastocyanin (Lawrence et al (1997) J. Biol. Chem. 272 (33): 20357-20363); corismate synthase (Schmidt et al (1993) J. Biol. Chem. 268 (36): 2744 | -27457); and the light harvesting chlorophyll a / b binding protein (LHBP) (Lamppa et al (1988) J. Biol. Chem. 263: 14996-14999). See also Von Heijne et al. (1991) Plant Mol. Biol. Rep. 9: 104-126; Clark et al. (1989) J. Biol. Chem. 264: 17544-17550; Della-Cioppa, et al. (1987) Plant Physiol. 84: 965-968; Romer et al. (1993) Biochem. Biophys. Res. Commun. 196: 1414-1421; and Shah et al. (1986) Science 233: 478-481.
In a preferred embodiment of the present invention, the pplinucleotides listed in Table 1 are expressed in plant cells of higher plants (e.g., spermatophytes, such as crop plants). A polynucleotide can be "introduced" into a plant cell by any means, including transfection, transformation or transduction, electroporation, particle bombardment, agroinfection and the like. Suitable methods for transforming or transfecting plant cells are described, for example, by particle bombardment, as set forth in U.S. Patent Nos. 4,945,050; 5,036,006; 5,100,792; 5,302,523; 5,464,765; 5,120,657; 6,084,154; and similar. More preferably, the transgenic maize seed of the invention can be obtained by transformation of Agrobacterium, as described in U.S. Patent Nos. 5,591,616; 5,731,179; 5,981,840; 5,990,387; 6,162,965; 6,420,630, publication of the US patent application No. 2002/0104132 and the like. The soybean transformation can be carried out, for example, with any of the techniques described in European Patent No. EP 0424047, US Patent No. 5,322,783, European Patent No. EP 0397 687, US Patent No. 5,376. 543 oi
U.S. Patent No. 5,169,770. A specific example of transformation into wheat can be found in PCT Application No. WO 93/07256. The cotton can be transformed with the methods described in U.S. Patent Nos. 5,004,863; 5,159,135, 5,846,797 and the like. The rice can be transformed with the methods described in U.S. Patent Nos. 4,666,844; 5,350,688; 6,153,813; 6,333,440; 6,288,312; 6,365,807; 6,329,571 and the like. The canola can be transformed, for example, with methods such as those described in U.S. Patent Nos. 5,188,958; 5,463,174; 5,750,871; EP1566443; WO02 / 00900; and similar. Other methods for the transformation of
plants are described, for example, in U.S. Patent Nos. 5,932,782; 6,153,811; 6,140,553; 5,969,213; 6,020,539 and the like. In accordance with the invention, any suitable plant transformation method can be used to insert a transgene in a particular plant.
According to the present invention, the introduced polynucleotide can be maintained stably in the plant cell, if it is incorporated into a non-chromosomal autonomous replicon or integrated into the plant chromosomes. Alternatively, the introduced polynucleotide may be present in a non-replicating extrachromosomal vector and may be expressed or active transiently. |
The invention also comprises a method for producing a transgenic plant comprising at least one polynucleotide listed in Table 1, wherein expression of the polynucleotide in the plants results in increased growth and / or yield of the plant under normal or limiting conditions. water and / or greater tolerance to environmental stress, compared to a variety of wild type of the plant that comprises the following stages: (a) introducing into a plant cell a cassette of expression described above, (b) regenerating a transgenic plant of the transformed plant cell; and select plants with higher yield of regenerated plant cells. The plant cell can be, without limitation, a protoplast, a cell that produces gametes and a cell that regenerates into a whole plant. As used herein, the term "transgenic" refers to any plant, plant cell, callus, plant tissue or part of the plant that contains the expression cassette described above. According to the invention, the expression cassette is stably integrated into a chromosome or stable extrachromosomal element, so that it is transmitted to successive generations
The effect of the genetic modification on the growth and / or yield and / or tolerance to stress of the plant can be evaluated by cultivating the modified plant under normal and / or less than adequate conditions, and then analyzing the growth characteristics and / or the metabolism of the plant. Said analytical techniques are known to those skilled in the art, and include measures of dry weight, wet weight, seed weight, number of seeds, polypeptide synthesis, carbohydrate synthesis, lipid synthesis, evapotranspiration rates, general performance of plant and / or culture, flowering, reproduction, seed settling, root growth, respiration rates, photosynthesis rates, composition of metabolites and the like.
The invention is also illustrated by the following examples, which should not be construed as limiting the scope of the present.
EXAMPLE 1
Characterization of genes
The guide genes b0757 (SEQ ID NO: 1), b2464 (SEQ ID NO: 9), b2990 (SEQ ID NO: 15), SLL1323 (SEQ ID NO: 47), slr1269 (SEQ ID NO: 45), YER065C ( SEQ ID NO: 17), YIR037W (SEQ ID NO: 19) and YMR015C (SEQ ID NO: 51) were cloned by standard recombination techniques. The functionality of each guideline was predicted by comparing the amino acid sequence encoded by the gene with other genes of known functionality. Homologous cDNAs were isolated from registered libraries of the respective species by the use of known methods. The sequences were processed and scored by bioinformatic analysis.
The gene b0757 (SEQ ID NO: 1) of E. coli encodes a galactokinase. The full-length amino acid sequence of b0757 (SEQ ID NO: 2) was subjected to blast against a registered cDNA database with an e-value of 10 (Altschul et aj., Supra). soybean and a corn homologue The relationship between the amino acids of these sequences is indicated in the alignments of Figure 1.
The b2464 gene (SEQ ID NO: 9) of E. coli encodes transaldolase A. The full length amino acid sequence of b2464 (SEQ ID NO: 10) was subjected to blast against a registered cDNA database with an e-value. of e "10 (Altschul et al., supra.) A homolog of canola and a soybean homologue were identified.The relationship between the amino acids of these sequences is indicated in the alignments of Figure 2.
The YIR037W gene (SEQ ID NO: 19) of S. cerevisiae encodes a phospholipid hydroperoxide glutathione peroxidase. The full-length amino acid sequence of YIR037W (SEQ ID NO: 20) was subjected to blast against a registered cDNA database with an e-value of 10 (Altschul et al., Supra). The soybean homologues, a sunflower homologue, a barley homologue, a rice homologue, and two corn homologues are indicated by the amino acids in these sequences, indicated by the alignments in Figure 3.
The SLL1323 gene (SEQ ID NO: 47) of Synechocystis sp. encodes the B 'subunit of ATP synthase. The full-length amino acid sequence of SLL1323 (SEQ ID NO: 48) was subjected to blast against a registered cDNA database with an e-value of 10.
(Altschul et al., Supra). A soybean homolog was identified. The relationship between the amino acids of these sequences is indicated in the alignments of Figure 4.
The gene YMR015C (SEQ ID NO: 51) of S. cerevisiae encodes a C-22 esteral desaturase. The full-length amino acid sequence of YMR015C SEQ ID NO. 52) was subjected to blast against a registered cDNA database with an e-value of 0 (Altschul et al., Supra.) A soy homolog was identified.The relationship between the amino acids of these sequences is indicated in the alignments of Figure 5.
EXAMPLE 2
Overexpression of guide genes in plants
The polynucleotides of Table 1 were ligated into an expression cassette by known methods. Three different promoters were used to control the expression of the transgenes in Arabidopsis: the USP promoter ("USP") from Vicia faba (SEQ ID ?? 61 or SEQ ID NO: 62); the superpromotor ("Super"; SEQ ID NO: 63); and the ubiquitin promoter of parsley ("PCUbi"; SEQ ID NO: 64). For directed expression, a transit peptide to mitochondria (SEQ ID NO: 56 or SEQ ID NO: 58, termed "Myth" in Tables 2-9) or a chloroplast transit peptide (SEQ ID NO: 60) was used. designated "Plástido" in Tables 2-10).
The C24 ecotype of Arabidopsis was transformed with constructs containing the guide genes described in Example 1 by known methods. The seeds of the transformed T2 plants were grouped on the basis of the promoter that directed the expression, the species of source genes and the type of targeting (chloroplast, mitochondrion or without targeting). The seed pools were used in the primary sweeps of biomass, under conditions of growth with abundant water and in conditions of limited water growth. The coincidences of the pools were selected in the primary scan, a molecular analysis was carried out and the seeds were collected. Then the seeds were used; collected for the analysis of the secondary sweeps, where a greater number of individuals was analyzed for each transgenic event. If plants of a higher biomass construct were identified in the secondary scan, compared to the controls, they passed to the tertiary sweep. In this sweep, more than 100 plants of all transgenic events were measured for that construct, under growing conditions with abundant water and growing conditions with drought. Data from the transgenic plants were compared with wild-type Arabidopsis plants or with plants grown from a pool of randomly selected transgenic Arabidopsis seeds by the use of statistical procedures
standard.
The plants that were cultivated in abundant water conditions were irrigated until the saturation of the soil twice a week. Images were taken of (the transgenic plants on days 17 and 21 by a commercial imaging system.) Alternatively, the plants were grown under limited water growth conditions by watering infrequently until the soil was saturated, which allowed The soil was dried between the water treatments In these experiments, water was supplied on days 0, 8, and 19 after sowing Images of the transgenic plants were taken on days 20 and 27 by a commercial imaging system.
Í
The image analysis software was used to compare images of transgenic plants and control plants grown in the same experiment. The images were used to determine the biomass or the relative size of the plants as pixels and the color of the plants as the relationship between the dark green area and the total area. The latter ratio, called the health index, was measured from the relative amount of chlorophyll in the leaves and, therefore, the relative amount of senescence or yellowing of the leaves and was recorded only on day 27. The variation exists between transgenic plants which contain the various guide genes, due to different sites of DNA insertion and other factors that impact on the level or pattern of gene expression. To show this effect, the data tables indicate the number of plants that were positive and negative for the trait.
Tables 2 to 9 show the comparison of the measurements of the plants of
Arabidopsis "CD" indicates that the plants were grown under conditions of drought cycles; "WW" indicates conditions of abundant water. A number after an abbreviation indicates multiple independent experiments under the same conditions. The percentage of change indicates the measurement of the transgenic plants with respect to the control plants, as a percentage of the non-transgenic control plants; the p value is the statistical significance of the difference between the control plants and the transgenic plants on the basis of a comparison of the T test of all the independent events, where NS indicates non-significant with a probability level of 5%; No. of events indicates the total number of independent transgenic events evaluated in the experiment; No. of positive events indicates the total number of independent transgenic events that were greater than the control in the experiment; No. of negative events indicates the total number of independent transgenic events that were less than the control in the experiment.
A. Galactoquinasa j
The galactokinase b0757 gene (SEQ ID NO: 1) was expressed in Arabidopsis under the control of the Superpromotor directed to the chloroplast. Table 2 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated in conditions of abundant water and drought cycles. i
Table 2
Table 2 shows that Arabidopsis plants expressing the b0757 gene directed to the chloroplast resulted in larger plants under water limiting conditions, but not under abundant water conditions. In these experiments, all the independent transgenic events expressing the b0757 gene were larger than the controls, indicating a better adaptation to environmental stress.
B. Transaldolase A
The b2464 gene of transaldolase A (SEQ ID NO: 9) was expressed in Arabidopsis under the control of the USP or Superpromotor promoter without subcellular targeting. Table 3 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated in conditions of abundant water and drought cycles.
Table 3
Table 3 shows that Arabidopsis plants expressing the b2464 gene under Superpromotor control were larger under water limiting conditions. The variation exists between transgenic plants that contain the b2464 gene, due to different sites of DNA insertion and other factors that impact on the level or pattern of gene expression. In these experiments, most of the independent transgenic events expressing the b2464 gene were larger than the controls, indicating a better adaptation to environmental stress. In addition, expression of the b2464 gene under the control of the USP promoter resulted in larger plants in conditions of abundant water.
i
In these experiments, all the transgenic events expressing the | b2464 gene were larger than the controls.
C. Hydrogenase-2 accessory protein
The b2990 gene of the accessory protein of hydrogenase-2 (SEQ ID NO: 1 | 5) was expressed in Arabidopsis under the control of the Superpromotor without subcellular targeting. Table 4 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated in conditions of abundant] water and drought cycles.
Table 4
Table 4 shows that the Arabidopsis plants expressing the b2990 gene were larger in conditions of abundant water and in water-limiting conditions. The variation exists between transgenic plants that contain the b2990 gene, due to different DNA insertion sites and other factors that impact the p-level pattern of gene expression. In these experiments, most of the independent transgenic events j that expressed the b2990 gene were larger than the controls, indicating a better adaptation to environmental stress. In conditions of abundant water, the expression of the b2990 gene resulted in plants with a lower health index; this effect was not observed in water limiting conditions. !
D. Isocitrato Mass
The YER065C gene of isocitrate lyase (SEQ ID NO: 17) was expressed in Arabidopsis under the control of the USP promoter without subcellular targeting. Table 5 shows the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated under abundant water conditions.
Table 5
Table 5 shows that the Arabidopsis plants expressing the YER065C gene were larger under abundant water conditions. The variation exists between transgenic plants that contain the YER065C gene, due to different sites of DNA insertion and other factors that impact on the level or pattern of gene expression. In these experiments, the majority of the independent transgenic events expressing the YER065C gene were larger than the controls.
|
E. Phospholipid hydroperoxide glutathione peroxidase
The YIR037W gene of phospholipid hydroperoxide glutathione peroxidase (SEQ ID NO: 19) was expressed in Arabidopsis under the control of the USP or PCUbi promoter directed to the chloroplast or to the mitochondria. Table 6 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated under conditions of abundant water and in water limiting conditions.
Table 6
Gen Type Promoter White Trait Percentage Value Events Events Events of change? valid negative positive essay
WW YIR037 PCUbi Plastid Biomass 4.9 NS 6 4; 2
W on Day 17
WW YIR037 PCUbi Plaster Biomass -1, 8 NS 6 3 3
W on Day 21
WW YIR037 PCUbi Plastid Index of 11, 3 0.006 6 6 0
W health
ww YIR037 USP Biomass plastid -12.1 0.003 6 1 5 W on Day 17
ww YIR037 USP Biomass plastid -8.1 0.017 6 1 5 W on Day 21
ww YIR037 USP Plástido Index of -7.5 0.000 6 0 6 W health
CD YIR037 PCUbi Biomass plastid 12.2 0.004 6 5: 1 W on Day 20
CD YIR037 PCUbi Biomass plaster 11.2 0.000 6 6 0 W on Day 27
CD YIR037 PCUbi Plastid index 10.2 0.011 6 5 1 W health
CD YIR037 USP Myth Biomass -6.1 NS 6 2 4 W on Day 20
CD YIR037 USP Myth Biomass -6.0 NS 6 1 5 W on Day 27
CD YIR037 USP Myth Index of 1, 2 NS 6 4 2 W health
CD YIR037 USP Biomass plastid -7.9 0.015 6 5 W on Day 20 1!
CD YIR037 USP Biomass plastid -8.9 0.007 6 o; 6 W on Day 27
CD YIR037 USP Plastid Index of -1, 0 NS 6 1 5 W health
Table 6 shows that the Arabidopsis plants expressing the YIR037W gene controlled by the PCUbi promoter and directed to the chloroplast were larger than the controls under water limiting conditions, indicating a better adaptation to environmental stress. In addition, the transgenic plants that expressed YIR037W had a darker green color than the controls under conditions of abundant water and in water-limiting conditions, as indicated by the increase in the health index. This suggests that transgenic plants expressing YIR037W produced more chlorophyll or had less chlorophyll degradation, compared to control plants.
When expression of YIR037W gene was controlled by the USP promoter and chloroplast targeted, transgenic plants expressing YIR037W were smaller than control plants under conditions of large amounts of water and water-limiting conditions. Likewise, the transgenic plants that expressed YIR037W had a less green color than the control plants under abundant water conditions, as indicated by the decrease in the health index. This suggests that transgenic plants expressing YIR037W with this specific construct produced less chlorophyll or had more chlorophyll degradation, compared to control plants. If the target of the YIR037W gene was the mitochondria under the control of the USP promoter, no difference was observed
significant in the biomass or health index, when the transgenic plants that expressed YIR037W were compared with the control plants.
F. Gama-glutamyltranspeptidase
The slr1269 gene glutamyl range (SEQ ID NO: 45) was expressed in Arabidopsis under control of the promoter pCUBI directed to the chloroplast, the mito'condria or without subcellular targeting. Table 7 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated in conditions of abundant water or drought cycles.
Table 7
CD slr1269 PCUbi Biomass plastid -6.8 0.018 5 2 3
on Day 27
CD slr1269 PCUbi Plástido Index of -1,9 NS 5 2; 3
I
Health
Table 7 shows that the Arabidopsis plants that expressed the srl1269 gene
directed to mitochondria were smaller than controls in water-limiting conditions. Likewise, the transgenic plants that expressed srl1269 had a less green color than the control plants in conditions of abundant water and in water-limiting conditions, as indicated by the decrease in the health index. This suggests that transgenic plants expressing srl1269 directed to the mitochondria produced less chlorophyll or had a greater degradation of chlorophyll, compared with plants
i
control. Similar results were observed when the expression of the slr1269 gene was directed to the chloroplast. Under water-limiting conditions, the transgenic plants expressing slr1269 were smaller than the controls. Under conditions of abundant water, the transgenic plants that expressed srl1269 had a less green color than the controls, as indicated by the decrease in the health index.
When slr1269 gene expression had no subcellular targeting, transgenic plants expressing slr1269 were larger than control plants in water limiting conditions, indicating better adaptation to environmental stress. In addition, the transgenic plants that expressed srl1269 had a darker green color than the controls under water limiting conditions, as indicated by the increase in the health index. This suggests that transgenic plants that expressed srl1269 produced more chlorophyll or had less degradation of chlorophyll, compared to control plants.
G. Subunit B 'of ATP synthase
The SLL1323 gene of the B 'subunit of ATP synthase (SEQ ID NO: 47) was expressed in
Arabidopsis under the control of the PCUbi promoter directed to the mitochondria. Table 8 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated in conditions of abundant water or drought cycles.
Table 8
Table 8 shows that Arabidopsis plants expressing the SLL1323 gene resulted in larger plants in conditions of abundant water and in water-limiting conditions. The variation exists between transgenic plants that contain the SLL1323 gene, due to different sites of DNA insertion and other factors that impact on the level or pattern of gene expression. In these experiments, most of the independent transgenic events that expressed the sIM 323 gene were larger than the controls, indicating a better adaptation to environmental stress. In addition, transgenic plants expressing SLL1323 had a darker green color than controls under water-limiting conditions, as indicated by the increase in health index. This suggests that the plants produced more chlorophyll or had less chlorophyll degradation during stress, compared to the control plants.
H. C-22 sterol desaturase
The YMR015C gene (SEQ ID NO: 51), which encodes C-22 sterol desaturase, was expressed and directed to the chloroplast in Arabidopsis by the use of three constructs. In one, the transcription is controlled by the PCUbi promoter. In another, the transcription is controlled by the Superpromotor. In the third construct, the transcription of YMR015C is controlled by the USP promoter. Table 9 indicates the biomass and health index data obtained from Arabidopsis plants transformed with these constructs and evaluated under conditions of abundant water and in water limiting conditions.
Table 9
I
Table 9 shows that the Arabidopsis plants with the PCUbi promoter that controlled the expression of YMR015C were significantly larger than the control plants, when the protein was also directed to the chloroplast. In addition, these transgenic plants and those with the Superpromotor that controlled the expression of Y R015C were darker green than the controls. These data indicate that the plants produced more chlorophyll or had less chlorophyll degradation during stress, compared to the control plants. Table 9 also shows that most of the independent transgenic events were larger than the controls.
Table 9 shows that the Arabidopsis plants grown under abundant water conditions with the PCUbi promoter or with the Superpromotor that controlled the expression of YMR015C were significantly smaller than the control plants, when the protein was also directed to the chloroplast. Table 9 also shows that most of the
Independent transgenic events were smaller than the controls. In addition, both constructs significantly reduced the amount of green color of the plants, when they were grown under abundant water conditions.
Claims (3)
1. A transgenic plant transformed with an expression cassette, characterized in that it comprises, in operative association, a) an isolated polynucleotide encoding a promoter capable of enhancing gene expression in leaves; b) an isolated polynucleotide encoding a transit peptide to mitochondria; Y c) an isolated polynucleotide encoding a full length isocitrate Nasa polypeptide comprising amino acids 22 to 550 of SEQ ID NO: 18, wherein the transgenic plant shows higher yield, as compared to a wild type plant of the same variety as does not understand the expression cassette. j
2. A seed that is genetically pure line for a transgene characterized because it comprises, in operative association, a) an isolated polynucleotide encoding a promoter capable of enhancing gene expression in leaves; b) an isolated polynucleotide encoding a transit peptide to mitochondria; Y c) an isolated polynucleotide encoding a full-length isocitrate lyase polypeptide comprising amino acids 22 to 550 of SEQ ID NO: 18, wherein the transgenic transgenic plant of said seed shows higher yield, as compared to a wild-type plant of the same variety that does not include the transgene. j
3. A method for increasing the yield of a plant, characterized in that the method comprises the following steps: a) transform a plant cell with a cassette of expression that accomplishes, in operative association, i) an isolated polynucleotide encoding a promoter capable of enhancing gene expression in leaves; ii) an isolated polynucleotide encoding a transit peptide to mitochondria; Y iii) an isolated polynucleotide encoding a full length isocitrate lyase polypeptide comprising amino acids 22 to 550 of SEQ ID NO: 18; b) regenerating transgenic plants of the transformed plant cell; Y c) selecting transgenic plants that show higher yield, as compared to a wild type plant of the same variety that does not comprise the expression cassette.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US16242709P | 2009-03-23 | 2009-03-23 | |
| EP09160826 | 2009-05-20 | ||
| PCT/EP2010/053470 WO2010108836A1 (en) | 2009-03-23 | 2010-03-17 | Transgenic plants with altered redox mechanisms and increased yield |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| MX2011009550A true MX2011009550A (en) | 2011-10-12 |
Family
ID=42244199
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| MX2011009550A MX2011009550A (en) | 2009-03-23 | 2010-03-17 | Transgenic plants with altered redox mechanisms and increased yield. |
Country Status (9)
| Country | Link |
|---|---|
| EP (1) | EP2411524A1 (en) |
| CN (1) | CN102361988A (en) |
| AR (1) | AR075918A1 (en) |
| AU (1) | AU2010227625A1 (en) |
| BR (1) | BRPI1006259A2 (en) |
| CA (1) | CA2754916A1 (en) |
| DE (1) | DE112010001241T5 (en) |
| MX (1) | MX2011009550A (en) |
| WO (1) | WO2010108836A1 (en) |
Families Citing this family (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN104254608A (en) * | 2012-05-21 | 2014-12-31 | 巴斯夫植物科学有限公司 | Plants having one or more enhanced yield-related traits and methods for producing the same |
| EP2677035A1 (en) * | 2012-06-22 | 2013-12-25 | BASF Plant Science Company GmbH | Plants having enhanced yield-related traits and a method for making the same |
| US11174467B2 (en) | 2015-04-08 | 2021-11-16 | Yield10 Bioscience, Inc. | Plants with enhanced yield and methods of construction |
| CN104988157A (en) * | 2015-06-19 | 2015-10-21 | 扬州大学 | OsTAL gene related to plant height and seed size and application of OsTAL gene |
| CN118291494B (en) * | 2024-05-15 | 2025-09-16 | 昆明理工大学 | Panax notoginseng sterol C-22 desaturase gene PnCYP A and application thereof |
Family Cites Families (43)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5380831A (en) | 1986-04-04 | 1995-01-10 | Mycogen Plant Science, Inc. | Synthetic insecticidal crystal protein gene |
| US4666844A (en) | 1984-09-07 | 1987-05-19 | Sungene Technologies Corporation | Process for regenerating cereals |
| US4945050A (en) | 1984-11-13 | 1990-07-31 | Cornell Research Foundation, Inc. | Method for transporting substances into living cells and tissues and apparatus therefor |
| US5036006A (en) | 1984-11-13 | 1991-07-30 | Cornell Research Foundation, Inc. | Method for transporting substances into living cells and tissues and apparatus therefor |
| US5100792A (en) | 1984-11-13 | 1992-03-31 | Cornell Research Foundation, Inc. | Method for transporting substances into living cells and tissues |
| US5188958A (en) | 1986-05-29 | 1993-02-23 | Calgene, Inc. | Transformation and foreign gene expression in brassica species |
| US5750871A (en) | 1986-05-29 | 1998-05-12 | Calgene, Inc. | Transformation and foreign gene expression in Brassica species |
| US5187073A (en) | 1986-06-30 | 1993-02-16 | The University Of Toledo | Process for transforming gramineae and the products thereof |
| US5004863B2 (en) | 1986-12-03 | 2000-10-17 | Agracetus | Genetic engineering of cotton plants and lines |
| US5120657A (en) | 1986-12-05 | 1992-06-09 | Agracetus, Inc. | Apparatus for genetic transformation |
| JPH04501201A (en) | 1987-12-21 | 1992-03-05 | ジ・アップジョン・カンパニー | Agrobacterium-mediated transformation of germinated plant seeds |
| US5350688A (en) | 1988-03-31 | 1994-09-27 | Kirin Beer Kabushiki Kaisha | Method for regeneration of rice plants |
| US5990387A (en) | 1988-06-10 | 1999-11-23 | Pioneer Hi-Bred International, Inc. | Stable transformation of plant cells |
| NZ230375A (en) | 1988-09-09 | 1991-07-26 | Lubrizol Genetics Inc | Synthetic gene encoding b. thuringiensis insecticidal protein |
| DE69033816T2 (en) | 1989-02-24 | 2002-08-08 | Monsanto Technology Llc., St. Louis | SYNTHETIC PLANT GENES AND METHOD FOR THEIR PRODUCTION |
| US5302523A (en) | 1989-06-21 | 1994-04-12 | Zeneca Limited | Transformation of plant cells |
| US5550318A (en) | 1990-04-17 | 1996-08-27 | Dekalb Genetics Corporation | Methods and compositions for the production of stably transformed, fertile monocot plants and cells thereof |
| US5322783A (en) | 1989-10-17 | 1994-06-21 | Pioneer Hi-Bred International, Inc. | Soybean transformation by microparticle bombardment |
| CA2080584C (en) | 1990-04-18 | 2000-09-05 | Marc Cornelissen | Modified bacillus thuringiensis insecticidal-crystal protein genes and their expression in plant cells |
| US5932782A (en) | 1990-11-14 | 1999-08-03 | Pioneer Hi-Bred International, Inc. | Plant transformation method using agrobacterium species adhered to microprojectiles |
| DK0539563T3 (en) | 1991-05-15 | 2001-11-12 | Monsanto Technology Llc | Process for Creating a Transformed Rice Plant |
| AU2781892A (en) | 1991-10-07 | 1993-05-03 | Ciba-Geigy Ag | Particle gun for introducing dna into intact cells |
| TW261517B (en) | 1991-11-29 | 1995-11-01 | Mitsubishi Shozi Kk | |
| DK0604662T3 (en) | 1992-07-07 | 2008-10-20 | Japan Tobacco Inc | Method of Transforming Monocotyledon |
| US5470353A (en) | 1993-10-20 | 1995-11-28 | Hollister Incorporated | Post-operative thermal blanket |
| AU687961B2 (en) | 1993-11-19 | 1998-03-05 | Biotechnology Research And Development Corporation | Chimeric regulatory regions and gene cassettes for expression of genes in plants |
| JP3102888B2 (en) | 1993-12-08 | 2000-10-23 | 日本たばこ産業株式会社 | Plant transformation method and vector therefor |
| MX9707666A (en) * | 1995-04-06 | 1997-11-29 | Seminis Vegetables | Process for selection of transgenic plant cells. |
| US5846797A (en) | 1995-10-04 | 1998-12-08 | Calgene, Inc. | Cotton transformation |
| JPH10117776A (en) | 1996-10-22 | 1998-05-12 | Japan Tobacco Inc | Transformation of indica rice |
| US5981840A (en) | 1997-01-24 | 1999-11-09 | Pioneer Hi-Bred International, Inc. | Methods for agrobacterium-mediated transformation |
| DK0900279T3 (en) | 1997-02-20 | 2005-01-31 | Bayer Bioscience Nv | Improved method of transformation of plants |
| JP2002500512A (en) * | 1997-05-30 | 2002-01-08 | マクギル・ユニヴァーシティ | Methods for enhancing and restoring naturally occurring male sterility and their use in producing hybrid crops |
| US6162965A (en) | 1997-06-02 | 2000-12-19 | Novartis Ag | Plant transformation methods |
| US6153813A (en) | 1997-12-11 | 2000-11-28 | Mississippi State University | Methods for genotype-independent nuclear and plastid transformation coupled with clonal regeneration utilizing mature zygotic embryos in rice (Oryza sativa) seeds |
| US6153811A (en) | 1997-12-22 | 2000-11-28 | Dekalb Genetics Corporation | Method for reduction of transgene copy number |
| US6333449B1 (en) | 1998-11-03 | 2001-12-25 | Plant Genetic Systems, N.V. | Glufosinate tolerant rice |
| US6420630B1 (en) | 1998-12-01 | 2002-07-16 | Stine Biotechnology | Methods for tissue culturing and transforming elite inbreds of Zea mays L. |
| AU7752001A (en) | 2000-06-28 | 2002-01-08 | Sungene Gmbh And Co Kgaa | Binary vectors for improved transformation of plant systems |
| CA2455430A1 (en) * | 2001-08-10 | 2003-02-20 | Basf Plant Science Gmbh | Sugar and lipid metabolism regulators in plants iii |
| DE10224889A1 (en) | 2002-06-04 | 2003-12-18 | Metanomics Gmbh & Co Kgaa | Process for the stable expression of nucleic acids in transgenic plants |
| EP1566443A1 (en) | 2004-02-23 | 2005-08-24 | SunGene GmbH & Co.KgaA | Improved transformation of brassica species |
| US20110039327A1 (en) * | 2007-05-18 | 2011-02-17 | Aaron Adriaan Winkler | Organic acid production by fungal cells |
-
2010
- 2010-03-17 BR BRPI1006259-9A patent/BRPI1006259A2/en not_active IP Right Cessation
- 2010-03-17 CN CN2010800132513A patent/CN102361988A/en active Pending
- 2010-03-17 DE DE112010001241T patent/DE112010001241T5/en not_active Withdrawn
- 2010-03-17 AU AU2010227625A patent/AU2010227625A1/en not_active Abandoned
- 2010-03-17 WO PCT/EP2010/053470 patent/WO2010108836A1/en not_active Ceased
- 2010-03-17 EP EP10709013A patent/EP2411524A1/en not_active Withdrawn
- 2010-03-17 CA CA2754916A patent/CA2754916A1/en not_active Abandoned
- 2010-03-17 MX MX2011009550A patent/MX2011009550A/en not_active Application Discontinuation
- 2010-03-22 AR ARP100100917A patent/AR075918A1/en not_active Application Discontinuation
Also Published As
| Publication number | Publication date |
|---|---|
| AR075918A1 (en) | 2011-05-04 |
| AU2010227625A1 (en) | 2011-10-13 |
| DE112010001241T5 (en) | 2012-05-16 |
| EP2411524A1 (en) | 2012-02-01 |
| BRPI1006259A2 (en) | 2015-08-25 |
| WO2010108836A1 (en) | 2010-09-30 |
| CN102361988A (en) | 2012-02-22 |
| AU2010227625A2 (en) | 2012-02-02 |
| CA2754916A1 (en) | 2010-09-30 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US20110302673A1 (en) | Transgenic Plants with Increased Yield | |
| Apse et al. | Engineering salt tolerance in plants | |
| CN101889089B (en) | Transgenic plants with increased stress tolerance and yield | |
| US20120042418A1 (en) | Engineering NF-YB Transcription Factors for Enhanced Drought Resistance and Increased Yield in Transgenic Plants | |
| EP2695944A2 (en) | Transgenic plants with increased yield | |
| MX2011009550A (en) | Transgenic plants with altered redox mechanisms and increased yield. | |
| Wang et al. | Functional expression of Vitreoscilla hemoglobin (VHb) in Arabidopsis relieves submergence, nitrosative, photo-oxidative stress and enhances antioxidants metabolism | |
| US20110283418A1 (en) | Transgenic Plants Having Altered Nitrogen Metabolism | |
| Kong et al. | Comparative proteomics analysis of OsNAS1 transgenic Brassica napus under salt stress | |
| US20120198588A1 (en) | Transgenic plants with altered redox mechanisms and increased yield | |
| AU2013203427A1 (en) | Transgenic plants with altered redox mechanisms and increased yield | |
| Hu | The roles of glutaredoxin GRXS17 in improving chilling tolerance in tomato and drought tolerance in rice via different mechanisms | |
| AU2013203388A1 (en) | Transgenic plants comprising as transgene a phosphatidate cytidylyltransferase |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FA | Abandonment or withdrawal |