[go: up one dir, main page]

Khairy et al., 2014 - Google Patents

Light sheet-based imaging and analysis of early embryogenesis in the fruit fly

Khairy et al., 2014

View PDF
Document ID
8237079788709577327
Author
Khairy K
Lemon W
Amat F
Keller P
Publication year
Publication venue
Tissue morphogenesis: methods and protocols

External Links

Snippet

The fruit fly is an excellent model system for investigating the sequence of epithelial tissue invaginations constituting the process of gastrulation. By combining recent advancements in light sheet fluorescence microscopy (LSFM) and image processing, the three-dimensional …
Continue reading at ndl.ethernet.edu.et (PDF) (other versions)

Classifications

    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/30—Subject of image; Context of image processing
    • G06T2207/30004—Biomedical image processing
    • G06T2207/30024—Cell structures in vitro; Tissue sections in vitro
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/20—Special algorithmic details
    • G06T2207/20112—Image segmentation details
    • G—PHYSICS
    • G02—OPTICS
    • G02B—OPTICAL ELEMENTS, SYSTEMS, OR APPARATUS
    • G02B21/00—Microscopes
    • G02B21/36—Microscopes arranged for photographic purposes or projection purposes or digital imaging or video purposes including associated control and data processing arrangements
    • G02B21/365—Control or image processing arrangements for digital or video microscopes
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00—Indexing scheme for image analysis or image enhancement
    • G06T2207/10—Image acquisition modality
    • G06T2207/10056—Microscopic image
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using infra-red, visible or ultra-violet light
    • G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64—Fluorescence; Phosphorescence
    • G01N21/645—Specially adapted constructive features of fluorimeters
    • G01N21/6456—Spatial resolved fluorescence measurements; Imaging
    • G01N21/6458—Fluorescence microscopy
    • G—PHYSICS
    • G02—OPTICS
    • G02B—OPTICAL ELEMENTS, SYSTEMS, OR APPARATUS
    • G02B21/00—Microscopes
    • G02B21/16—Microscopes adapted for ultra-violet illumination; Fluorescence microscopes
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00—Image analysis
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING; COUNTING
    • G06K—RECOGNITION OF DATA; PRESENTATION OF DATA; RECORD CARRIERS; HANDLING RECORD CARRIERS
    • G06K9/00—Methods or arrangements for reading or recognising printed or written characters or for recognising patterns, e.g. fingerprints
    • G06K9/00127—Acquiring and recognising microscopic objects, e.g. biological cells and cellular parts
    • G06K9/0014—Pre-processing, e.g. image segmentation ; Feature extraction
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00—Investigating characteristics of particles; Investigating permeability, pore-volume, or surface-area of porous materials
    • G01N15/10—Investigating individual particles
    • G01N15/14—Electro-optical investigation, e.g. flow cytometers

Similar Documents

Publication Publication Date Title
Stelzer et al. Light sheet fluorescence microscopy
Schmid et al. High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics
Stegmaier et al. Real-time three-dimensional cell segmentation in large-scale microscopy data of developing embryos
US7756305B2 (en) Fast 3D cytometry for information in tissue engineering
Khairy et al. Reconstructing embryonic development
Keller Imaging morphogenesis: technological advances and biological insights
Rittscher Characterization of biological processes through automated image analysis
Ding et al. Multiscale light-sheet for rapid imaging of cardiopulmonary system
Sena et al. Quantitation of cellular dynamics in growing Arabidopsis roots with light sheet microscopy
Strobl et al. Improving your four-dimensional image: traveling through a decade of light-sheet-based fluorescence microscopy research
Lim et al. Light sheet fluorescence microscopy (LSFM): past, present and future
Lee et al. Long-term three-dimensional high-resolution imaging of live unlabeled small intestinal organoids via low-coherence holotomography
de Medeiros et al. Light-sheet imaging of mammalian development
Kopecky et al. Three‐dimensional reconstructions from optical sections of thick mouse inner ears using confocal microscopy
Cutrale et al. Imaging, visualization, and computation in developmental biology
Wijesinghe et al. Experimentally unsupervised deconvolution for light-sheet microscopy with propagation-invariant beams
Narasimhan et al. Oblique light-sheet tomography: fast and high resolution volumetric imaging of mouse brains
Raiola et al. Imaging approaches and the quantitative analysis of heart development
Schmied et al. Open-source solutions for SPIMage processing
Wu et al. Tools to reverse-engineer multicellular systems: case studies using the fruit fly
Khairy et al. Light sheet-based imaging and analysis of early embryogenesis in the fruit fly
WO2021198279A1 (en) Methods and devices for virtual scoring of tissue samples
Olofsson et al. Single cell organization and cell cycle characterization of DNA stained multicellular tumor spheroids
Dominguez Mantes et al. Spotiflow: accurate and efficient spot detection for fluorescence microscopy with deep stereographic flow regression
Ichimura et al. Volumetric trans-scale imaging of massive quantity of heterogeneous cell populations in centimeter-wide tissue and embryo