Download data

Please cite OMIA

While OMIA and OMIA downloads are freely available, we request that any resources or publications that result from use of OMIA data cite OMIA, e.g.:

Nicholas, F.W., Tammen, I., & Sydney Informatics Hub. (1995). Online Mendelian Inheritance in Animals (OMIA) [dataset]. https://omia.org/. https://doi.org/10.25910/2AMR-PV70

Please include an acknowledgement that the data were made available by software support from the Sydney Informatics Hub, funded from the Ronald Bruce Anstee bequest to the Sydney School of Veterinary Science for the Anstee Hub for Inherited Diseases in Animals (AHIDA).

Please contact [email protected] to discuss co-authorship arrangements for publications that rely on the use of the MySQL dump or extended data from OMIA.

To download a current MySQL dump of OMIA please click on the appropriate link below.

	Zip	gzip
sql	omia.sql.zip	omia.sql.gz
xml	omia.xml.zip	omia.xml.gz

Note on gene IDs

The database dumps above contain OMIA's internal gene IDs. In most cases, these don't correspond to NCBI gene IDs. You can download a list of the genes used in OMIA here to see the mapping between OMIA's internal gene IDs (gene_id) and NCBI gene IDs (ncbi_gene_id).
Empty cells in the latter column reflect the lack of that gene-species in the NCBI Gene database.

Print version of OMIA

There is also a print version of the OMIA database (with all records up to 2nd July 2012) available here. This is a 793 page document in PDF format with file size 9.8M.

Causal mutations

A table of phenes for which there is a causal mutation in a known gene is available here.

Table S1. Single-gene traits (listed alphabetically) for which a causal/key mutation has been reported in non-laboratory animals

Table S2. Genes (listed alphabetically by symbol) in which mutations have been shown to result in single-gene traits in non‐laboratory animals

VCF exports

Download VCF exports. These are primarily intended for maintainers of other databases - currently we are not providing documentation or support for other users.