Commits · py3 · Pablo S C Santos / ACACIA

Browse files

Jan 30, 2023
- Merge branch 'cleanup' into 'py3' · 71fb4bb2
  Pablo S C Santos authored Jan 30, 2023
  71fb4bb2
- clean-up + docker · b896258f
  David '-1' Schmid authored Jan 30, 2023 and Pablo S C Santos committed Jan 30, 2023
  
  b896258f
May 02, 2022
- Merge branch 'py3-fixes' into 'py3' · 775f6663
  Pablo S C Santos authored May 02, 2022
  775f6663
Apr 30, 2022
- fix: #18 · 9ad3af0b
  David '-1' Schmid authored Apr 30, 2022
  9ad3af0b
- fix: #11 · e4b4e918
  David '-1' Schmid authored Apr 30, 2022
  
  e4b4e918
- fix: #17 · dbbc88ee
  David '-1' Schmid authored Apr 30, 2022
  
  dbbc88ee
- fix: #10 · 02543873
  David '-1' Schmid authored Apr 30, 2022
  
  02543873
Jan 23, 2022
- remove test pooled_output_file.is_file() · 8fc17826
  Pablo S C Santos authored Jan 23, 2022
  
  8fc17826
- simplify wording for user · 94e65dd6
  Pablo S C Santos authored Jan 23, 2022
  
  94e65dd6
- add decode("utf-8") for printing in file · 3a8c4ccc
  Pablo S C Santos authored Jan 23, 2022
  
  3a8c4ccc
- remove os.environ['COLUMNS'] · 181296b2
  Pablo S C Santos authored Jan 23, 2022
  
  181296b2
- remove py3 files and use pathlib directly · 1016863b
  Pablo S C Santos authored Jan 23, 2022
  
  1016863b
- import pathlib directly · 59465311
  Pablo S C Santos authored Jan 23, 2022
  
  59465311
- use shutil directly, no need for local file · e7d0efe6
  Pablo S C Santos authored Jan 23, 2022
  
  e7d0efe6
- improve wording · e5a1bbac
  Pablo S C Santos authored Jan 23, 2022
  
  e5a1bbac
- improve messaging to user · 82185e67
  Pablo S C Santos authored Jan 23, 2022
  
  82185e67
- improve wording for user · 890d1ab6
  Pablo S C Santos authored Jan 23, 2022
  
  890d1ab6
- improve wording, add ".fastq.gz" format · e70afa11
  Pablo S C Santos authored Jan 23, 2022
  
  e70afa11
- improve wording · 35330f52
  Pablo S C Santos authored Jan 23, 2022
  
  35330f52
- ConfigParser -> configparser · 64255197
  Pablo S C Santos authored Jan 23, 2022
  
  64255197
- improve wording · 37e9f3ac
  Pablo S C Santos authored Jan 23, 2022
  
  37e9f3ac
- rename ConfigParser to configparser · 7f2da133
  Pablo S C Santos authored Jan 23, 2022
  
  7f2da133
- raw_input() -> input() · 7797e854
  Pablo S C Santos authored Jan 23, 2022
  
  7797e854
- raw_input() -> input() · 363e92fb
  Pablo S C Santos authored Jan 23, 2022
  
  363e92fb
- add install for pandas · e835665d
  Pablo S C Santos authored Jan 23, 2022
  
  e835665d
- remove _future_ module import · 68b11640
  Pablo S C Santos authored Jan 23, 2022
  
  68b11640
- add exception handling for sequence_compare() · ac52feeb
  Pablo S C Santos authored Jan 23, 2022
  
  ac52feeb
- range() -> list(range()) · 06bd8054
  Pablo S C Santos authored Jan 23, 2022
  
  06bd8054
- annotate future removal of py3pathlib · 4f94dddb
  Pablo S C Santos authored Jan 23, 2022
  
  4f94dddb
Jan 21, 2022
- reinsert py3.py3pathlib · e1c78610
  Pablo S C Santos authored Jan 21, 2022
  
  e1c78610
- remove "future" · 0bebff76
  Pablo S C Santos authored Jan 21, 2022
  
  0bebff76
- range() -> list(range()) · 1943b7fb
  Pablo S C Santos authored Jan 21, 2022
  
  1943b7fb
- update pathlib and future modules · c7775ceb
  Pablo S C Santos authored Jan 21, 2022
  
  c7775ceb
- simplify wording. · c9f89137
  Pablo S C Santos authored Jan 21, 2022
  
  c9f89137
- remove bioconda setup · 0bfd3add
  Pablo S C Santos authored Jan 21, 2022
  
  0bfd3add
- add link to R and to Oligotype · 65b9624f
  Pablo S C Santos authored Jan 21, 2022
  
  65b9624f
- simplify install · 146ca7fc
  Pablo S C Santos authored Jan 21, 2022
  
  146ca7fc
- install Oligotyping with pip · 1be49eb7
  Pablo S C Santos authored Jan 21, 2022
  
  1be49eb7
- update third-party software and R packages · 3296aab8
  Pablo S C Santos authored Jan 21, 2022
  
  3296aab8
- source -> conda activate · 7ded63c4
  Pablo S C Santos authored Jan 21, 2022
  
  7ded63c4