Commits · v3.2.0 · licheng0921 / sonicparanoid2

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Apr 23, 2020
- release date fix · 7ee247dc
  Salvatore Cosentino authored Apr 23, 2020
  
  View commits for tag v3.2.0 v3.2.0
  7ee247dc
- Prepared for packaging · 3a2d0cb3
  Salvatore Cosentino authored Apr 23, 2020
  
  3a2d0cb3
- Code cleanup · 532b80e8
  Salvatore Cosentino authored Apr 23, 2020
  
  532b80e8
Apr 22, 2020
- Set dbtype to auto in makedb · c09d3e9a
  Salvatore Cosentino authored Apr 22, 2020
  
  c09d3e9a
- Removed not used variables · c0f97505
  Salvatore Cosentino authored Apr 22, 2020
  
  c0f97505
- Removed redundant imports · ca05db4c
  Salvatore Cosentino authored Apr 22, 2020
  
  ca05db4c
- Ignore *_c.c files in git · 3cfe8094
  Salvatore Cosentino authored Apr 22, 2020
  
  3cfe8094
- code cleanup · 118b28e2
  Salvatore Cosentino authored Apr 22, 2020
  
  118b28e2
- Readded seq_tools.py · 42da2732
  Salvatore Cosentino authored Apr 22, 2020
  
  42da2732
- Removed redundant scripts · 749f467f
  Salvatore Cosentino authored Apr 22, 2020
  
  749f467f
- Remove most not reuiqred functions (seq_tools.py)) · 5bb358bd
  Salvatore Cosentino authored Apr 22, 2020
  
  5bb358bd
- Increase minimum package versions · 89dd6b84
  Salvatore Cosentino authored Apr 22, 2020
  
  89dd6b84
Apr 21, 2020
- use Protocol 4 when dumping pickles · 8074b8d7
  Salvatore Cosentino authored Apr 21, 2020
  
  8074b8d7
- Avoid loading seqtools where not required · 5132aace
  Salvatore Cosentino authored Apr 21, 2020
  
  5132aace
- Binary size reduction · 8e46aaad
  Salvatore Cosentino authored Apr 21, 2020
  
  8e46aaad
- removed c source · d8aea7b4
  Salvatore Cosentino authored Apr 21, 2020
  
  d8aea7b4
- Commented not used functions · 1cea0b26
  Salvatore Cosentino authored Apr 21, 2020
  1cea0b26
- Removed not required c source · f3069acf
  Salvatore Cosentino authored Apr 21, 2020
  
  f3069acf
- removed c source of mistackenly added source files · 3b57d153
  Salvatore Cosentino authored Apr 21, 2020
  
  3b57d153
- Code cleanupGeneral cleanup · a725277c
  Salvatore Cosentino authored Apr 21, 2020
  
  a725277c
- Commented unused debug functions · aa2ed68f
  Salvatore Cosentino authored Apr 21, 2020
  aa2ed68f
- Code clean-up · 3f2f1a18
  Salvatore Cosentino authored Apr 21, 2020
  3f2f1a18
- Removed redundat functions · cb73be40
  Salvatore Cosentino authored Apr 21, 2020
  cb73be40
- removed redundant code · def03edc
  Salvatore Cosentino authored Apr 21, 2020
  
  def03edc
- Retrain Prediction model · 3326a6c0
  Salvatore Cosentino authored Apr 21, 2020
  3326a6c0
- Retrain prediction model · f1688358
  Salvatore Cosentino authored Apr 21, 2020
  f1688358
Apr 20, 2020
- ignore files generated from builds · 7f3f3ad7
  Salvatore Cosentino authored Apr 20, 2020
  
  7f3f3ad7
- Save matrixes using file descriptors · eeca0d55
  Salvatore Cosentino authored Apr 20, 2020
  eeca0d55
- Created branch · 349b128a
  Salvatore Cosentino authored Apr 20, 2020
  349b128a
Dec 02, 2019
- added adaboost model files · 957cea90
  Salvatore Cosentino authored Dec 02, 2019
  
  957cea90
Nov 27, 2019
- Merge remote-tracking branch 'origin/feat-essential_alignments' · e8fa29c0
  Salvatore Cosentino authored Nov 27, 2019
  
  e8fa29c0
Nov 26, 2019
- version bump to 1.3.0 · b4564dcd
  Salvatore Cosentino authored Nov 26, 2019
  
  b4564dcd
- Updated readme file and changed beta-version · 7654e988
  Salvatore Cosentino authored Nov 26, 2019
  
  7654e988
Nov 22, 2019
- · d061c527
  Salvatore Cosentino authored Nov 22, 2019
  d061c527
- code cleanup · 117b3265
  Salvatore Cosentino authored Nov 22, 2019
  
  117b3265
- · 19ebfc09
  Salvatore Cosentino authored Nov 22, 2019
  19ebfc09
- Write file with the proteins that were not grouped · 960f405d
  Salvatore Cosentino authored Nov 22, 2019
  
  960f405d
- · 6b750045
  Salvatore Cosentino authored Nov 22, 2019
  6b750045
- Groups (including flat files) are now created (remapping required) · 39ad5f59
  Salvatore Cosentino authored Nov 22, 2019
  
  39ad5f59
- Added function to create groups from only 2 proteomes · 14395ec0
  Salvatore Cosentino authored Nov 22, 2019
  
  14395ec0