Commits · v2.1.3 · E.L.Cortegano / metapop2 · GitLab

Jun 10, 2019
- Release version v2.1.3 · 93c93853
  E.L.Cortegano authored Jun 10, 2019
  
  View commits for tag v2.1.3 v2.1.3
  
  93c93853
- Merge branch 'release-v2.1.3' into develop that bumps version number · 90897e5b
  E.L.Cortegano authored Jun 10, 2019
  
  90897e5b
- Change version numbers to v2.1.3 · 8b0d9ac6
  E.L.Cortegano authored Jun 10, 2019
  
  8b0d9ac6
- Merge branch 'issue-70' into develop that fix #70 · 6a664dba
  E.L.Cortegano authored Jun 10, 2019
  
  6a664dba
- Return error in metapop is called without arguments · d0042d67
  E.L.Cortegano authored Jun 10, 2019
  
  d0042d67
- Recall that ploidy errors can come from typos in the individual genotypes · a1cc066b
  E.L.Cortegano authored Jun 10, 2019
  
  a1cc066b
- Updated configuration message errors related to ploidy and management · ea2c689f
  E.L.Cortegano authored Jun 10, 2019
  
  ea2c689f
- Fixed error message when number alleles per locus do not match ploidy · ee533986
  E.L.Cortegano authored Jun 10, 2019
  
  ee533986
Jun 09, 2019
- Fixed bug averaging inbreeding an ancestring measures with incomplete genotypes · 42d16b7d
  E.L.Cortegano authored Jun 09, 2019
  
  42d16b7d
Jun 07, 2019
- Fixed locus status for genomic positions with sequencing errors · 43272d1d
  E.L.Cortegano authored Jun 07, 2019
  
  43272d1d
Jun 06, 2019
- Removed unnecesary variable GenLocus in Population class · ce1cf186
  E.L.Cortegano authored Jun 06, 2019
  
  ce1cf186
- Cannot read pedigree files for non-diploid data · e0f9f2a9
  E.L.Cortegano authored Jun 06, 2019
  
  e0f9f2a9
Jun 03, 2019
- Fixed calculation of inbreeding from self-coancestry for polyploids · 2f27dd54
  E.L.Cortegano authored Jun 03, 2019
  
  2f27dd54
May 31, 2019
- Return error in management is used for polyploid genotypes · eaafc01c
  E.L.Cortegano authored May 31, 2019
  
  eaafc01c
- Updated documentation referring to polyploids · db867912
  E.L.Cortegano authored May 31, 2019
  
  db867912
- Added option to set ploidy from terminal · cd33c9b5
  E.L.Cortegano authored May 31, 2019
  
  cd33c9b5
- Return error if a conversion mode is enabled for polyploids · dc2f1bda
  E.L.Cortegano authored May 31, 2019
  
  dc2f1bda
- Return error if Genepop or PLINK formats are used with polyploids · ef4a0dae
  E.L.Cortegano authored May 31, 2019
  
  ef4a0dae
- Methods related to Locus are more generalized regarding ploidy · e7979b3a
  E.L.Cortegano authored May 31, 2019
  
  e7979b3a
- Fixed allele counting · 7bbb961f
  E.L.Cortegano authored May 31, 2019
  
  7bbb961f
- calculate_ind_freq functions works for an arbitrary ploidy number · 0d5cd0ba
  E.L.Cortegano authored May 31, 2019
  
  0d5cd0ba
- Fixed assignation of default individual sex values · d57dd3d9
  E.L.Cortegano authored May 31, 2019
  
  d57dd3d9
May 30, 2019
- coancestry_matrix function works for an arbitrary ploidy number · b3940322
  E.L.Cortegano authored May 30, 2019
  
  b3940322
- Small changes in class Locus · 5332c1c2
  E.L.Cortegano authored May 30, 2019
  
  5332c1c2
Apr 27, 2019
- Merge branch 'hotfix-69' that fix #69 · 1327e0a1
  E.L.Cortegano authored Apr 27, 2019
  
  View commits for tag v2.1.2 v2.1.2
  1327e0a1
- Change version numbers to v2.1.2 · f6b6c8cc
  E.L.Cortegano authored Apr 27, 2019
  
  f6b6c8cc
- Update build status label · f991dbda
  E.L.Cortegano authored Apr 27, 2019
  
  f991dbda
- Merge branch 'develop' into hotfix-69 that fix #69 · 8b56f2af
  E.L.Cortegano authored Apr 27, 2019
  
  8b56f2af
Apr 23, 2019
- Merge branch 'issue-69' into develop that fix #69 · 921c4036
  E.L.Cortegano authored Apr 23, 2019
  
  921c4036
- Header processing is done before checking population header · 665faf42
  E.L.Cortegano authored Apr 23, 2019
  
  665faf42
Apr 18, 2019
- Merge branch 'develop' that updated citation (doi) · e36783a5
  E.L.Cortegano authored Apr 18, 2019
  
  e36783a5
- Update citation (doi) · 4014e818
  E.L.Cortegano authored Apr 18, 2019
  
  4014e818
Feb 12, 2019
- Update build status label · 1e9ad074
  E.L.Cortegano authored Feb 12, 2019
  
  1e9ad074
- Merge commit 'f38f7ca1 ' into develop that solves hotfix #67 · 299de933
  E.L.Cortegano authored Feb 12, 2019
  
  299de933
- Release version 2.1.1 · c43dab70
  E.L.Cortegano authored Feb 12, 2019
  
  View commits for tag v2.1.1 v2.1.1
  c43dab70
- Change version numbers to v2.1.1 · f38f7ca1
  E.L.Cortegano authored Feb 12, 2019
  
  f38f7ca1
- Fixed error overwritting frequency file over generations under simulation mode · 386fc2e6
  E.L.Cortegano authored Feb 12, 2019
  
  386fc2e6
Feb 01, 2019
- Release version 2.1 · 746585d0
  E.L.Cortegano authored Feb 01, 2019
  
  View commits for tag v2.1 v2.1
  746585d0
- Merge branch 'release-v2.1' into develop that bumps version number · 476bf787
  E.L.Cortegano authored Feb 01, 2019
  
  476bf787
- Fixed typos · d172715c
  E.L.Cortegano authored Feb 01, 2019
  
  d172715c