Commits · v2.1 · E.L.Cortegano / metapop2 · GitLab

Feb 01, 2019
- Release version 2.1 · 746585d0
  E.L.Cortegano authored Feb 01, 2019
  
  View commits for tag v2.1 v2.1
  
  746585d0
- Merge branch 'release-v2.1' into develop that bumps version number · 476bf787
  E.L.Cortegano authored Feb 01, 2019
  
  476bf787
- Fixed typos · d172715c
  E.L.Cortegano authored Feb 01, 2019
  
  d172715c
- Change version numbers to v2.1 · cb41b363
  E.L.Cortegano authored Feb 01, 2019
  
  cb41b363
- Fixed typos in the output file · 8869d556
  E.L.Cortegano authored Feb 01, 2019
  
  8869d556
- Fixed typos · dc3c3fa0
  E.L.Cortegano authored Feb 01, 2019
  
  dc3c3fa0
Jan 30, 2019
- Averange number of alleles per locus and subpopulation is saved in the main output file · 95618d02
  E.L.Cortegano authored Jan 30, 2019
  
  95618d02
- Updated documentation for coancestry files · bf1b4201
  E.L.Cortegano authored Jan 30, 2019
  
  bf1b4201
- Under simulation file, coancestry files are named after its replicate and generation number · 3d379eed
  E.L.Cortegano authored Jan 30, 2019
  
  3d379eed
- Fixed CI/CD script · ad408d97
  E.L.Cortegano authored Jan 30, 2019
  
  ad408d97
- Enable save of coancestry matrix under management · 2ef6c244
  E.L.Cortegano authored Jan 30, 2019
  
  2ef6c244
- Code cleaning · 42675c5c
  E.L.Cortegano authored Jan 30, 2019
  
  42675c5c
- Simplified error calls in output file · 04346e89
  E.L.Cortegano authored Jan 30, 2019
  
  04346e89
- Coancestry matrix can be saved as a separate output file · c5aefd9b
  E.L.Cortegano authored Jan 30, 2019
  
  c5aefd9b
- Coancestry matrix saved internally under simulation when pedigrees are used · fc8152ff
  E.L.Cortegano authored Jan 30, 2019
  
  fc8152ff
- Input for the next generation is only generated internally under simulation mode · 65bc1c45
  E.L.Cortegano authored Jan 30, 2019
  
  65bc1c45
- Replaced 'nextgen' option by 'save_coancestry' · e40bb9b8
  E.L.Cortegano authored Jan 30, 2019
  
  e40bb9b8
Jan 29, 2019
- Removed option to append output · 79386b94
  E.L.Cortegano authored Jan 29, 2019
  
  79386b94
Jan 28, 2019
- Updated Rscript · 9dd53398
  E.L.Cortegano authored Jan 28, 2019
  
  9dd53398
Jan 24, 2019
- windows binaries are downloaed via secure http · 16a89a98
  E.L.Cortegano authored Jan 24, 2019
  
  16a89a98
- Edit typo in README file · 24c5e92f
  E.L.Cortegano authored Jan 24, 2019
  
  24c5e92f
- Added link to windows binary executables · c8abcf1f
  E.L.Cortegano authored Jan 24, 2019
  
  c8abcf1f
- Fixed typos in the README file · 8fc6a69b
  E.L.Cortegano authored Jan 24, 2019
  
  8fc6a69b
- Merge branch 'issue-52' into develop that fix #52 · 4d51ffdc
  E.L.Cortegano authored Jan 24, 2019
  
  4d51ffdc
- Edited format in README file · d85e5add
  E.L.Cortegano authored Jan 24, 2019
  
  d85e5add
- Added documentation on the parameters used in population analyses · dcb0b253
  E.L.Cortegano authored Jan 24, 2019
  
  dcb0b253
- Improved output of simulation statistics · 7a9c3d69
  E.L.Cortegano authored Jan 24, 2019
  
  7a9c3d69
Jan 23, 2019
- Updated results example file · 025a8457
  E.L.Cortegano authored Jan 23, 2019
  
  025a8457
- Fixed error outputing genetic distance · d1f52873
  E.L.Cortegano authored Jan 23, 2019
  
  d1f52873
- Finnish management if cannot find random initial solution · a2776df1
  E.L.Cortegano authored Jan 23, 2019
  
  a2776df1
- Flush output also for bootstrap replicates · 5ea67d80
  E.L.Cortegano authored Jan 23, 2019
  
  5ea67d80
- Flush output with carriage return (non-debugging mode) · 085a4f10
  E.L.Cortegano authored Jan 23, 2019
  
  085a4f10
- Uniformize calls to error functions · d509514c
  E.L.Cortegano authored Jan 23, 2019
  
  d509514c
- Improved the use of minimum contributions to a synthetic pool · c9a4653a
  E.L.Cortegano authored Jan 23, 2019
  
  c9a4653a
- Only the average rarefacted sample size per locus is outputed (not a value per locus) · 898041fb
  E.L.Cortegano authored Jan 23, 2019
  
  898041fb
- Rarefacted sample size per locus is only calculated if rarefaction is enabled · 0a33c0fd
  E.L.Cortegano authored Jan 23, 2019
  
  0a33c0fd
- Rarefaction is ignored if all populations have the same size · 0272f7d7
  E.L.Cortegano authored Jan 23, 2019
  
  0272f7d7
- Disable rarefaction when it is not explicitely enabled, even if rarefaction size is set · 6a895905
  E.L.Cortegano authored Jan 23, 2019
  
  6a895905
- Rarefacted sample size cannot be larger than the actual largest population size · 143502b6
  E.L.Cortegano authored Jan 23, 2019
  
  143502b6
- Rarefacted alleles per locus are printed for every number of loci · 40f4c1cc
  E.L.Cortegano authored Jan 23, 2019
  
  40f4c1cc