Commits · master · MSEA code / sdm-framework · GitLab

Jun 16, 2022
- Add LICENSE · c38c0e1e
  Jessica Nephin authored Jun 16, 2022
  
  c38c0e1e
Jan 07, 2022
- Merge branch 'develop' into 'master' · 2eb5d3d7
  Jessica Nephin authored Jan 07, 2022
  2eb5d3d7
- Small edits to map options to accomodate crab modelling project · fbea8a0c
  Jessica Nephin authored Jan 06, 2022
  
  fbea8a0c
Nov 12, 2021
- Merge branch 'develop' into 'master' · e1a3ef5a
  Jessica Nephin authored Nov 12, 2021
  e1a3ef5a
- Added more options to predict maps for MCP and colour scale, converted the... · 6dea951a
  Jessica Nephin authored Nov 12, 2021
  6dea951a
Sep 29, 2021
- Merge branch 'develop' into 'master' · eeffb9ae
  Jessica Nephin authored Sep 29, 2021
  eeffb9ae
- Updated readme, fixed HSI evaluate and updated ensemble to be faster with terra · 5533f721
  Jessica Nephin authored Sep 28, 2021
  
  5533f721
Jun 04, 2021
- Added cvBlock option for using an existing spatial blocks and fold assignment · a2098422
  Jessica Nephin authored Jun 04, 2021
  
  a2098422
Jun 03, 2021
- Added fixed effects categorical variable to GAM, tested fixed effect... · daad4d9a
  Jessica Nephin authored Jun 02, 2021
  daad4d9a
May 21, 2021
- Changed predict function to terra to work with categorical fixed effects with... · a67cb8cb
  Jessica Nephin authored May 21, 2021
  a67cb8cb
- Changed GLM model fitting from dredge to lasso regression, must faster and... · a3c1714d
  Jessica Nephin authored May 20, 2021
  a3c1714d
May 20, 2021
- Added Tjur R2 · cb59104e
  Jessica Nephin authored May 19, 2021
  cb59104e
Apr 26, 2021
- Small change to mapLayers function for SD maps · 99da59d4
  Jessica Nephin authored Apr 26, 2021
  
  99da59d4
Apr 23, 2021
- Merge branch 'develop' into 'master' · 3d66e105
  Jessica Nephin authored Apr 23, 2021
  3d66e105
- Added figures for raster predictions from each fold · 49e46da0
  Jessica Nephin authored Apr 23, 2021
  
  49e46da0
Apr 15, 2021
- Merge branch 'develop' into 'master' · 25f00b92
  Jessica Nephin authored Apr 15, 2021
  25f00b92
- Updated readme to include recent changes · 90bd45df
  Jessica Nephin authored Apr 15, 2021
  
  90bd45df
- Finished running dungy data intergration experiments, all changes inclduing... · 94868812
  Jessica Nephin authored Apr 15, 2021
  94868812
Apr 10, 2021
- Small changes · b344432f
  Jessica Nephin authored Apr 09, 2021
  
  b344432f
Apr 07, 2021
- Improved paired historgram plots in DataPrep, no longer getting memory errors... · 9ba670c0
  Jessica Nephin authored Apr 07, 2021
  9ba670c0
Apr 06, 2021
- Updated plotPredictorPairs function so the values are readable · 818740f4
  Jessica Nephin authored Apr 06, 2021
  
  818740f4
- Added option to dataprep to source any predictor variable from the species... · c2a088b7
  Jessica Nephin authored Apr 06, 2021
  c2a088b7
- MargEffects and Extrap functions now work with random effects, facVars can now... · 20799659
  Jessica Nephin authored Apr 06, 2021
  20799659
Apr 01, 2021
- Finished updating DataPrep.R to accomodate factor variables in the species... · ae3a99a5
  Jessica Nephin authored Apr 01, 2021
  ae3a99a5
- Fixed location of summary file and the SAC maps that were not plotting because... · 43d1b172
  Jessica Nephin authored Mar 31, 2021
  43d1b172
Nov 04, 2020
- Merge branch 'develop' into 'master' · 17aad055
  Jessica Nephin authored Nov 04, 2020
  17aad055
- Changed summary to default summary() and now checks for possible issues with k... · c5ec16ea
  Jessica Nephin authored Nov 03, 2020
  c5ec16ea
Nov 03, 2020
- Merge branch 'develop' into 'master' · 7d3f2930
  Jessica Nephin authored Nov 03, 2020
  7d3f2930
- Fixed bug in GAM fitting when facVars is NULL, add if else statement · bdbf5022
  Jessica Nephin authored Nov 03, 2020
  
  bdbf5022
Oct 30, 2020
- Merge branch 'develop' into 'master' · 351605e3
  Jessica Nephin authored Oct 30, 2020
  351605e3
- Fixed maxent print issue when there are no factors present, and adjusted... · 55627ad2
  Jessica Nephin authored Oct 30, 2020
  55627ad2
Oct 29, 2020
- Merge branch 'develop' into 'master' · c191fa5d
  Jessica Nephin authored Oct 29, 2020
  c191fa5d
- Finished testing update to MarginalEffects() function · 66627a8a
  Jessica Nephin authored Oct 29, 2020
  
  66627a8a
- Merge branch 'develop' into 'master' · b4cd28a7
  Jessica Nephin authored Oct 29, 2020
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Oct 28, 2020
- marg effects still had an issue with facvars in glm models without all variables, fixed now · 3dbc29bb
  Jessica Nephin authored Oct 28, 2020
  
  3dbc29bb
- Merge branch 'develop' into 'master' · 4735addc
  Jessica Nephin authored Oct 28, 2020
  4735addc
- Fixed issue with factor variables in marginal effects function and plot · f515e459
  Jessica Nephin authored Oct 28, 2020
  
  f515e459
Oct 27, 2020
- Merge branch 'develop' into 'master' · 30ee2c03
  Jessica Nephin authored Oct 27, 2020
  30ee2c03
- Finished testing GAM and hist plot addition · 568319ae
  Jessica Nephin authored Oct 27, 2020
  
  568319ae
- Added histogram resid plot and concurvity checks · 6009ef48
  Jessica Nephin authored Oct 27, 2020
  
  6009ef48