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/*
* Header file for combineKmers.cpp
* Takes union of dsk counted kmers
*
*/
// C++ stl includes
#include <iostream>
#include <fstream>
#include <vector>
#include <tuple>
#include <unordered_map>
#include <iterator>
// Library includes
#include <boost/program_options.hpp>
#include <gzstream.h>
// Function prototypes
int parseCommandLine (int argc, char *argv[], boost::program_options::variables_map& vm);
void printHelp(boost::program_options::options_description& help);
std::vector<std::tuple<std::string, std::string> > readSamples(const std::string& sample_file);
size_t checkMin(const size_t num_samples, const int input_min_samples);
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