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citHeader("Please cite the paper below for the qusage software itself. Please also try to cite the appropriate methodology articles when using either the QGen mixed model framework or the gene set meta-analysis pipeline.")
bibentry("Article",
title = "Quantitative set analysis for gene expression: a method to quantify gene set differential expression including gene-gene correlations.",
author = c(person("Gur", "Yaari"), person("Christopher R.", "Bolen"),person("Juilee", "Thakar"),person("Steven H.", "Kleinstein")),
journal = "Nucleic Acids Res.",
year = 2013,
textVersion = "Yaari G, Bolen CR, Thakar J, Kleinstein SH. Quantitative set analysis for gene expression: a method to quantify gene set differential expression including gene-gene correlations. Nucleic Acids Res. 2013 Aug 5.",
mheader = "To cite QuSAGE, use the following publication:"
)
bibentry("Article",
title = "Quantitative gene set analysis generalized for repeated measures, confounder adjustment, and continuous covariates.",
author = c(person("Jacob A.", "Turner"), person("Christopher R.", "Bolen"),person("Derek M.", "Blankenship")),
journal = "BMC Bioinformatics.",
year = 2015,
textVersion = "Turner JA, Bolen CR, Blankenship DM. Quantitative gene set analysis generalized for repeated measures, confounder adjustment, and continuous covariates. BMC Bioinformatics. 2015 Aug 28",
mheader = "To cite the QGen mixed model framework, use the following publication:"
)
bibentry("Article",
title = "Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).
.",
author = c(person("Hailong", "Meng"),person("Gur", "Yaari"), person("Christopher R.", "Bolen"),person("Stefan", "Avey"),person("Steven H.", "Kleinstein")),
journal = "PLoS Computat Biol.",
year = 2019,
textVersion = " Meng H, Yaari G, Bolen CR, Avey S, Kleinstein SH. Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE). PLoS Comput Biol. 2019",
mheader = "To cite the QuSAGE meta-analysis framework, use the following publication:"
)
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