mirplant Files

miRPlant: An Integrated Tool for Identification of Plant miRNA

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Name	Modified	Size	InfoDownloads / Week
Parent folder
wheat7.zip	2018-11-26	626.9 MB	0
wheat5.zip	2018-11-26	583.8 MB	0
wheat6.zip	2018-11-26	533.7 MB	0
wheat4.zip	2018-11-26	569.3 MB	0
wheat3.zip	2018-11-26	644.1 MB	0
wheat2.zip	2018-11-26	654.8 MB	0
wheat1.zip	2018-11-26	524.3 MB	0
Egrandis.zip	2017-05-23	227.7 MB	0
barley.zip	2017-05-09	1.5 GB	0
Wheat.zip	2015-06-04	2.2 GB	0
duckweed.zip	2015-03-16	57.5 MB	0
sly240.zip	2014-08-28	287.5 MB	0
Osativa.zip	2014-07-15	140.6 MB	0
ppe.zip	2014-07-15	84.7 MB	0
mtr.zip	2014-07-15	144.5 MB	0
gra.zip	2014-07-09	278.3 MB	0
Cassava.zip	2014-01-07	196.5 MB	0
TAIR9.zip	2014-01-07	46.2 MB	0
Totals: 18 Items		9.3 GB	0

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miRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download...
MITP
miRNA is a widely known small non-coding RNA which can mediate gene regulation of most important biological processes in plants and animals. Therefore, identification conserve and novel miRNA and their target genes in model and new sequenced species are inevitable. MITP is designed to identify...
sRNAWorkbench
A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
miRDP2
miRDeep-P2 (miRDP2) is developed to accurately and fast analyze microRNAs (miRNAs) transcriptome in plants. It is adopted from miRDeep-P (miRDP) with new strategies and overhauled algorithm. We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size...
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MicroRNAs (miRNAs) are of significance in tuning and buffering gene expression. Despite abundant analysis tools have been developed in the last two decades, plant miRNA identification from next-generation sequencing (NGS) data remains challenging. Here present a user-friendly pure Java-based...

mirplant Files

miRPlant: An Integrated Tool for Identification of Plant miRNA

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