Recommendation Tracker Code

Make groups added to applications selected by default.
Don't show groups or rules that are required by other groups or rules in profiles.
Don't show non-selected sub groups or rules of group in a profile.
Reworked how items are added to table model list.

+ fixed issue #2991100: edits to a newly created reference persist
+ changed return types in ApplicationListViewPanel from ArrayList<...> to List<...>

- Removed debugging System.out.println() statements

- Replaced LoginDialog with LoginWindow; a JFrame so it appears in the task bar.

+ replaced KeyListeners with DocumentListeners for MixedContent text fields.

Added Benchmark level selecitons

+ fixed issue where search result panel did not appear after search was performed

+ search panel now starts at the bottom instead of appearing half open and then closing.

Merged in latest trunk

sorta works