Re: [raxmlGUI news & help] "Windows cannot find..." error

Oops, that was it. It runs if I reformat; multistate doesn't seem to work
unless there's at least one cell with character state 0. Very helpful,
thanks!

This was the only matrix I analysed as binary, so I suppose the problem I
had had to do with not having all the implied character states in the
matrices. This is quite plausible, since I was keeping out a few species
from my test matrices. I'll try them out again, making sure of having no
"missing" character state numbers.

Thanks again for the quick response, and all the best,

E.


On 22 February 2014 01:50, Ingo Michalak <rax...@go...>wrote:

> Dear Eduardo,
> binary data should only contain 0 and 1. Try to analyse with multi state
> or reformat your data. Please keep us updated if this helped!
> Best
> Ingo
>
> On February 22, 2014 1:38:02 AM CET, Eduardo Ascarrunz <ea...@gm...>
> wrote:
>
>> Hi everyone,
>>
>> I've been stumbling with the following error message when I try to launch
>> an analysis (Windows 8.1, Python 2.7):
>>
>> Windows cannot find 'RAXML_bipartitions.sim.tre'. Make sure you've typed
>>> the name correctly, then try again.
>>
>>
>> ("sim" is the output name in this case)
>>
>> And the analysis is aborted. This does not happen every time with every
>> dataset, and sometimes changing one setting here or there seems to help,
>> but I've been unable to find any pattern in the settings of the program
>> when I get the error messages. The following is one of the matrices with
>> which I get the error:
>>
>> 9 108
>>> s9
>>> 121111121111211222122111111211122112111112121221212221222221221112122211211111111121112111122122121112112221
>>> s1
>>> 212111112111112211121111122112211111111121221221111111111122211122111111211111211211211111111111121211221111
>>> s2
>>> 221122122111111111212111112112111112212211221121111111221112122112112112112211121111212111211111112121122121
>>> s3
>>> 211122212111221112212121222111212121112121211221111111111111111111111211111112211111112211212111122221121112
>>> s4
>>> 211122212111221212212121222111221122111121221222111111111111111122111211111112211111112221212111122221121111
>>> s5
>>> 111121212121222112112121112111212122112111221121221112111111111121112211111112211211212211212111122121121211
>>> s6
>>> 111211112112221121212211112111211222222121111121211111111122111121111111121121211111211211111112222211112211
>>> s7
>>> 111111112112121121211121122122211121212122211121211111111111111111111111221221211211211221111111211121122122
>>> s8
>>> 111111112111221121211121122122211121212122211121211111112111111111111111121121222111211221111111111121122121
>>
>>
>> I set the data type as binary, and the outgroup as "s9". I touch nothing
>> else and I get the error.
>>
>> I thought it could be a permissions issue, so I've tried running the
>> program from my Documents directory as well. It isn't that.
>>
>> I'd appreciate any help.
>>
>> Best,
>>
>> E.
>>
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