Signal Peptide Predication

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#18 Signal Peptide Predication

Status: open

Owner: Benjamin Landsteiner

Labels: New Programs (5)

Priority: 7

Updated: 2005-06-06

Created: 2004-06-28

Creator: Mike Olson

Private: No

New program for signal peptide prediction: Evaluate and
Implement, if appropriate:
See:
http://bio10846/local/MycoRefs/signalPeptides.html

Discussion

Mike Olson - 2005-06-02

priority: 5 --> 7
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Benjamin Landsteiner - 2005-06-06

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It looks like SignalP is "currently available platforms include MIPS (under
IRIX, Silicon Graphics), SPARC (under Solaris, Sun), Alpha (under OSF1)
and Pentium family (under Linux)." This excludes PPC, which we currently
support. Further, SignalP is a commercial product. What route do we
want to take on this? SignalP is supported in BioPerl, and sounds quite
useful . . .

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Benjamin Landsteiner - 2005-06-06

labels: --> New Programs

assigned_to: nobody --> landstei
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